Pregenerated sensors for RBM11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032940Ensembl transcript IDs: ENSMUST00000046378.14, ENSMUST00000114249.8, ENSMUST00000114253.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACACAGCCTGCCCGCAACCCCTCTaGGGCCAGCCCACCTGCGCT | + |
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Preference number: 2 (lower is better) Translates to: KYMRHHSVHLVIAAIHTACPQPL*GQPTCA Trigger: AGCGCAGGTGGGCTGGCCTCAGAGGGGTTGCGGGCA...GGCTGTGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAACATGCAAAGGTCACACCCACGTGTGCCTTATTCTCTCCTGAACTGGGTTTTTCTAGAGAGGTTTaGGAGCAGTGCAGATACAGT | + |
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Preference number: 2 (lower is better) Translates to: GQHAKVTPTCALFSPELGFSREV*EQCRYS Trigger: ACTGTATCTGCACTGCTCTCAAACCTCTCTAGAAAA...ACCCAGTTCAGGAGAGAATAAGGCACACGTGGGTGTGACCTTTGCATGTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGAGAATGTCCCAAGGCAATCTTaGAAATGCAAACGCACAACA | + |
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Preference number: 2 (lower is better) Translates to: SSQQFTQPLCPSHPCWENVPRQS*KCKRTT Trigger: TGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGAC...ATTCTCCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTAGGACACGGAGCATATaGCAACTATCTTTCCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: IGIKYMRHHSVHLVIAAIRTRSI*QLSFPS Trigger: TGACGGGAAAGATAGTTGCCATATGCTCCGTGTCCT...AATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACAATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAATACCATCAACTGAGTaGCCTTACAAACAAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: WTIGIKYMRHHSVHLVIAIPSTE*PYKQEV Trigger: CACTTCTTGTTTGTAAGGGCACTCAGTTGATGGTAT...TGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTATTGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACAATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAAAGCTGGACAAGAAATaGATCATTTGGTGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: WTIGIKYMRHHSVHLVIAKLDKK*IIWCNR Trigger: TCTGTTGCACCAAATGATCCATTTCTTGTCCAGCTT...TGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTATTGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTTTTCTTTCTCTGGTGGGAGAGTTACAAGAACATTTCCCAGTTGTGACAAAGCTGGACAAGAAATaGATCATTTGGTGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: VSFLSLVGELQEHFPVVTKLDKK*IIWCNR Trigger: TCTGTTGCACCAAATGATCCATTTCTTGTCCAGCTT...TGTCACAACTGGGAAATGTTCTTGTAACTCTCCCACCAGAGAAAGAAAACTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATTTTTCTAGAGAGGTTTaGGAGCAGTGCAGATACAGT | + |
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Preference number: 2 (lower is better) Translates to: QSHISIRFQKRQAGQEMDFSREV*EQCRYS Trigger: ACTGTATCTGCACTGCTCTCAAACCTCTCTAGAAAA...ATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGACTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTACAGGAAGTTTCCTGGTCTTTAACAAAAGACACCACAGTAAAATCGACTTTAGACAGTAGATACTaGTACCATCAACTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: ILQEVSWSLTKDTTVKSTLDSRY*YHQLSA Trigger: GGCACTCAGTTGATGGTATCAGTATCTACTGTCTAA...AGTCGATTTTACTGTGGTGTCTTTTGTTAAAGACCAGGAAACTTCCTGTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACAATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCATCAAAAACGACAAGCTaGACAAGAAATGGATCATTT | + |
|
Preference number: 2 (lower is better) Translates to: WTIGIKYMRHHSVHLVIASKTTS*TRNGSF Trigger: AAATGATCCATTTCTTGTCCAGCTTGTCGTTTTTGA...TGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTATTGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCTTTTTTTTCTAGAGAGGTTTaGGAGCAGTGCAGATACAGT | + |
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Preference number: 2 (lower is better) Translates to: RQSCKCKRTTIYYCFKAFFSREV*EQCRYS Trigger: ACTGTATCTGCACTGCTCTCAAACCTCTCTAGAAAA...AAAAGCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCT 38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTACAGGAAGTTTCCTGGTCTTTAACAAAAGACACCACAGTAAAATCGACTAACATTTCCCAGTTGTaGCATTTAGAGCATGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: ILQEVSWSLTKDTTVKSTNISQL*HLEHVL Trigger: TAGGACATGCTCTAAATGTCACAACTGGGAAATGTT...AGTCGATTTTACTGTGGTGTCTTTTGTTAAAGACCAGGAAACTTCCTGTAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTACAGGAAGTTTCCTGGTCTTTAACAAAAGACACCACAGTAAAATCGACTGTTAAGAGCAGATACTaGGTTAGTTTTCTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ILQEVSWSLTKDTTVKSTVKSRY*VSFLSL Trigger: CAGAGAAAGAAAACTAACTCAGTATCTGCTCTTAAC...AGTCGATTTTACTGTGGTGTCTTTTGTTAAAGACCAGGAAACTTCCTGTAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGTCAAAAACGACAAGCTaGACAAGAAATGGATCATTT | + |
|
Preference number: 2 (lower is better) Translates to: SQGNLANANAQQYITVSRSKTTS*TRNGSF Trigger: AAATGATCCATTTCTTGTCCAGCTTGTCGTTTTTGA...CCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGGGTCCCAAGGCAATCTaGCAAATGCAAACGCACAAC | + |
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Preference number: 3 (lower is better) Translates to: LGHRSNSHSHYVLPTLAGGPKAI*QMQTHN Trigger: GTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACC...CCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR TCA 72 bp | GAGGCCAGCCCACCTGCGCTGGTAGAAAGCTTTCTGTaGGACAATGGTCCCAAGGCAATCTTGCAAATGCAA | + |
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Preference number: 3 (lower is better) Translates to: EASPPALVESFL*DNGPKAILQMQ Trigger: TTGCATTTGCAAGATTGCCTTGGGACCATTGTCTCACAGAAAGCTTTCTACCAGCGCAGGTGGGCTGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR TCA 72 bp | AGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTaGGTTCCAGGGCAGCCAGAGCTACACAGAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: RFLSSRPAWSTK*VPGQPELHRET Trigger: GGTTTCTCTGTGTAGCTCTGGCTGCCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CAA 90 bp | GCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACAATGTCCTTCCCACCCTaGCTGGGAGAATTAGACAGT | + |
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Preference number: 3 (lower is better) Translates to: ALSICGIILYTWSSQQFTMSFPP*LGELDS Trigger: ACTGTCTAATTCTCCCAGCAAGGGTGGGAAGGACAT...TGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTGGTCCCAAGGCAATCTaGCAAATGCAAACGCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: IGIKYMRHHSVHLVIAAIGPKAI*QMQTHN Trigger: GTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACC...AATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR TCA 72 bp | TTCCCACCCTTGCTGGGAGAATTAGACAGTAGATACTaGTACCATCAACTGAGTGCCCTTACAAACAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPPLLGELDSRY*YHQLSALTNKK Trigger: CTTCTTGTTTGTAAGGGCACTCAGTTGATGGTATCAGTATCTACTGTCTAATTCTCCCAGCAAGGGTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR TCA 72 bp | CTCTGGTGGGAGAGTTACAAGAACATTTCCCAGTTGTaGCATTTAGAGCATGTCCTACTTCAACCTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: LWWESYKNISQL*HLEHVLLQPNF Trigger: AAAATTAGGTTGAAGTAGGACATGCTCTAAATGTCACAACTGGGAAATGTTCTTGTAACTCTCCCACCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| 3UTR GCA 72 bp | AAAGCTTTCTGTGAGACAATGGTCCCAAGGCAATCTTaGAAATGCAAACGCACAACAATATATTACTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: KAFCETMVPRQS*KCKRTTIYYCF Trigger: GAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACCATTGTCTCACAGAAAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | ATTATTCCCATTAGTTCTGCCCGCAACCCCTCTGAGGCCAGCCCACCTGCGCTGGTCGCTGTCGCTGTCTaGCCTTTGCCTCTTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: IIPISSARNPSEASPPALVAVAV*PLPLPF Trigger: AAACGGAAGAGGCAAAGGCCAGACAGCGACAGCGAC...CAGCGCAGGTGGGCTGGCCTCAGAGGGGTTGCGGGCAGAACTAATGGGAATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | ATTATTCCCATTAGTTCTGCCCGCAACCCCTCTGAGGCCAGCCCACCTGCGCTGCACACTGTTGGGAAGTaGGGCTGGCATCTCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: IIPISSARNPSEASPPALHTVGK*GWHLTE Trigger: TTCTGTGAGATGCCAGCCCCACTTCCCAACAGTGTG...CAGCGCAGGTGGGCTGGCCTCAGAGGGGTTGCGGGCAGAACTAATGGGAATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | CTTGGTCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGTCACAGAAAGGCGGTTaGAGCACTGGACTGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LGHRSNSHSHYVLPTLAGSQKGG*STGLCA Trigger: CGCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGA...CCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | CTTGGTCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGCTCGGGCCTCTAAATTaGCCACAAACACGGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGHRSNSHSHYVLPTLAGLGPLN*PQTRSC Trigger: ACAGGACCGTGTTTGTGGGCAATTTAGAGGCCCGAG...CCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | GGGCAACATGCAAAGGTCACACCCACGTGTGCCTTATTCTCTCCTGAACTGGGTTCACAGAAAGGCGGTTaGAGCACTGGACTGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: GQHAKVTPTCALFSPELGSQKGG*STGLCA Trigger: CGCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGA...ACCCAGTTCAGGAGAGAATAAGGCACACGTGGGTGTGACCTTTGCATGTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | TCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGAGAATTCACAGAAAGGCGGTTaGAGCACTGGACTGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SSQQFTQPLCPSHPCWENSQKGG*STGLCA Trigger: CGCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGA...ATTCTCCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR TCA 90 bp | CTTGGTCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGGTTCCTGAAGCTGTGTaGGTTAATCTTAGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGHRSNSHSHYVLPTLAGVPEAV*VNLSTA Trigger: AGCTGTGCTAAGATTAACTCACACAGCTTCAGGAAC...CCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | CTTGGTCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGCTCCCAAACCGATACTaGACATTAATTGGTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LGHRSNSHSHYVLPTLAGLPNRY*TLIGLP Trigger: TGGGAGACCAATTAATGTGCAGTATCGGTTTGGGAG...CCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046378.14 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | GGGCAACATGCAAAGGTCACACCCACGTGTGCCTTATTCTCTCCTGAACTGGGTTCGCTGTCTGGCCTTTaGCTCTTCCGTTTATTCCTA | + |
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Preference number: 4 (lower is better) Translates to: GQHAKVTPTCALFSPELGSLSGL*LFRLFL Trigger: TAGGAATAAACGGAAGAGGCAAAGGCCAGACAGCGA...ACCCAGTTCAGGAGAGAATAAGGCACACGTGGGTGTGACCTTTGCATGTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | CTTGGTCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGTTACCAAACCGATACTaGACATTAATTGGTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LGHRSNSHSHYVLPTLAGLPNRY*TLIGLP Trigger: TGGGAGACCAATTAATGTGCAGTATCGGTTTGGTAA...CCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114249.8 |
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| CDS-3UTR CCA 90 bp | ATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTTCCACTCATAGGAGCTaGGTCCAGCCTCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IGIKYMRHHSVHLVIAAISTHRS*VQPLGL Trigger: CAGGCCCAGAGGCTGGACCCAGCTCCTATGAGTGGA...AATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | CCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCACCCAGGCACACTGTTaGGAAGTGGGGCTGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: PKAILQMQTHNNILLFQGTQAHC*EVGLAS Trigger: AGATGCCAGCCCCACTTCCCAACAGTGTGCCTGGGT...GCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | TCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGTCCACTCATAGGAGCTaGGTCCAGCCTCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SQGNLANANAQQYITVSRSTHRS*VQPLGL Trigger: CAGGCCCAGAGGCTGGACCCAGCTCCTATGAGTGGA...CCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR TCA 90 bp | TGGACAATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCATCCTCTCTTGTCTTCTaGGCTACTGTCGCTGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: WTIGIKYMRHHSVHLVIASSLVF*ATVAVA Trigger: AGCGACAGCGACAGTAGCTCAGAAGACAAGAGAGGA...TGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTATTGTCCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | GCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACACTCGGGCCTCTAAATTaGCCACAAACACGGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALSICGIILYTWSSQQFTLGPLN*PQTRSC Trigger: ACAGGACCGTGTTTGTGGGCAATTTAGAGGCCCGAG...TGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | TCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGAGAATTTCCGTCTCTGTCTTTaGAAAGAGTCACTTTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SSQQFTQPLCPSHPCWENFRLCL*KESLWL Trigger: TAACCAAAGTGACTCTTTGCAAAGACAGAGACGGAA...ATTCTCCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | TCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGAGAATTCTTCTTTTTACACTTaGGGCACTTTTGGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SSQQFTQPLCPSHPCWENSSFYT*GTFGFL Trigger: AAGGAAGCCAAAAGTGCCGCAAGTGTAAAAAGAAGA...ATTCTCCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR GCA 90 bp | TCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCAGGAAAGGAAGGCCTaGCCGCCATTTCATCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SQGNLANANAQQYITVSRQERKA*PPFHRS Trigger: GGAACGATGAAATGGCGGGCAGGCCTTCCTTTCCTG...CCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | GTTAGTTTTCTTTCTCTGGTGGGAGAGTTACAAGAACATTTCCCAGTTGTGACACACACTGTTGGGAAGTaGGGCTGGCATCTCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSFLSLVGELQEHFPVVTHTVGK*GWHLTE Trigger: TTCTGTGAGATGCCAGCCCCACTTCCCAACAGTGTG...TGTCACAACTGGGAAATGTTCTTGTAACTCTCCCACCAGAGAAAGAAAACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | AATGGTCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTACCCAGGCACACTGTTaGGAAGTGGGGCTGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: NGPKAILQMQTHNNILLFTQAHC*EVGLAS Trigger: AGATGCCAGCCCCACTTCCCAACAGTGTGCCTGGGT...AAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS-3UTR CCA 90 bp | GTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCATTTCCACTCATAGGAGCTaGGTCCAGCCTCTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIFPYVFKNDKLDKKWIISTHRS*VQPLGL Trigger: CAGGCCCAGAGGCTGGACCCAGCTCCTATGAGTGGA...AATGATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCAGGAAAGGAAGGCCTaGCCGCCATTTCATCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSHISIRFQKRQAGQEMDQERKA*PPFHRS Trigger: GGAACGATGAAATGGCGGGCAGGCCTTCCTTTCCTG...ATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | GCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACATCGCTGTCTGGCCTTTaGCTCTTCCGTTTATTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALSICGIILYTWSSQQFTSLSGL*LFRLFL Trigger: TAGGAATAAACGGAAGAGGCAAAGGCCAGACAGCGA...TGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACACAGCCCAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYMRHHSVHLVIAAIHTAQLSKL*LAGSEE Trigger: CTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTG...GGCTGTGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTGTCGCTGTCGCTGTCTaGCCTTTGCCTCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGPKAILQMQTHNNILLFVAVAV*PLPLPF Trigger: AAACGGAAGAGGCAAAGGCCAGACAGCGACAGCGAC...AAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTACAGGAAGTTTCCTGGTCTTTAACAAAAGACACCACAGTAAAATCGACTGTCGCTGTCGCTGTCTaGCCTTTGCCTCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILQEVSWSLTKDTTVKSTVAVAV*PLPLPF Trigger: AAACGGAAGAGGCAAAGGCCAGACAGCGACAGCGAC...AGTCGATTTTACTGTGGTGTCTTTTGTTAAAGACCAGGAAACTTCCTGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| 3UTR CAA 72 bp | ATAGGCATTAAGTATATGCGGCATCATTCTGTACACTaGGTCATCGCAGCAATTCACACAGCCACTATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGIKYMRHHSVH*VIAAIHTATMS Trigger: GGACATAGTGGCTGTGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCTCGGGCCTCTAAATTaGCCACAAACACGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGPKAILQMQTHNNILLFLGPLN*PQTRSC Trigger: ACAGGACCGTGTTTGTGGGCAATTTAGAGGCCCGAG...AAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | TGGACAATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCACTCCCAAACCGATACTaGACATTAATTGGTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WTIGIKYMRHHSVHLVIALPNRY*TLIGLP Trigger: TGGGAGACCAATTAATGTGCAGTATCGGTTTGGGAG...TGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTATTGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046378.14 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | GTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCATTCAGGAAAGGAAGGCCTaGCCGCCATTTCATCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIFPYVFKNDKLDKKWIIQERKA*PPFHRS Trigger: GGAACGATGAAATGGCGGGCAGGCCTTCCTTTCCTG...AATGATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCTTTTTCCTCTCTTGTCTTCTaGGCTACTGTCGCTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQSCKCKRTTIYYCFKAFSSLVF*ATVAVA Trigger: AGCGACAGCGACAGTAGCTCAGAAGACAAGAGAGGA...AAAAGCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTTCGCTGTCTGGCCTTTaGCTCTTCCGTTTATTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NGPKAILQMQTHNNILLFSLSGL*LFRLFL Trigger: TAGGAATAAACGGAAGAGGCAAAGGCCAGACAGCGA...AAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGACCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | GCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACATCTTCTTTTTACACTTaGGGCACTTTTGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSICGIILYTWSSQQFTSSFYT*GTFGFL Trigger: AAGGAAGCCAAAAGTGCCGCAAGTGTAAAAAGAAGA...TGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCCAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PKAILQMQTHNNILLFQGQLSKL*LAGSEE Trigger: CTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTG...GCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTACAGGAAGTTTCCTGGTCTTTAACAAAAGACACCACAGTAAAATCGACTGTTCCTGAAGCTGTGTaGGTTAATCTTAGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQEVSWSLTKDTTVKSTVPEAV*VNLSTA Trigger: AGCTGTGCTAAGATTAACTCACACAGCTTCAGGAAC...AGTCGATTTTACTGTGGTGTCTTTTGTTAAAGACCAGGAAACTTCCTGTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTTTCCGTCTCTGTCTTTaGAAAGAGTCACTTTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IGIKYMRHHSVHLVIAAIFRLCL*KESLWL Trigger: TAACCAAAGTGACTCTTTGCAAAGACAGAGACGGAA...AATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCATTTGGTGCCAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FPYVFKNDKLDKKWIIWCQLSKL*LAGSEE Trigger: CTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTG...GCACCAAATGATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCTTTTGTTCCTGAAGCTGTGTaGGTTAATCTTAGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQSCKCKRTTIYYCFKAFVPEAV*VNLSTA Trigger: AGCTGTGCTAAGATTAACTCACACAGCTTCAGGAAC...AAAAGCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAATCACAGAGTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAATCTTCTTTTTACACTTaGGGCACTTTTGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQSHISIRFQKRQAGQSSFYT*GTFGFL Trigger: AAGGAAGCCAAAAGTGCCGCAAGTGTAAAAAGAAGA...TTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGACTCTGTGATTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| 3UTR CAA 72 bp | ATAAAAATGATAGAAAACATGAATAATCACACAGTGTaGCCTTTAAGCATAGGACACGGAGCATATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IKMIENMNNHTV*PLSIGHGAYGN Trigger: GTTGCCATATGCTCCGTGTCCTATGCTTAAAGGCAACACTGTGTGATTATTCATGTTTTCTATCATTTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | ATTATTCCCATTAGTTCTGCCCGCAACCCCTCTGAGGCCAGCCCACCTGCGCTGACTCGGGCCTCTAAATaGCCCACAAACACGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IIPISSARNPSEASPPALTRASK*PTNTVL Trigger: CAGGACCGTGTTTGTGGGCAATTTAGAGGCCCGAGT...CAGCGCAGGTGGGCTGGCCTCAGAGGGGTTGCGGGCAGAACTAATGGGAATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS TCA 90 bp | ACACTTGCGGCACTTTTGGCTTCCTTCGTTTCCTCTCTTGTCTTCTaGGCTACTGTCGCTGTCGCTGTCTGGCCTTTGCCTCTTCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLAALLASFVSSLVF*ATVAVAVWPLPLPF Trigger: AAACGGAAGAGGCAAAGGCCAGACAGCGACAGCGACAGTAGCTCAGAAGACAAGAGAGGAAACGAAGGAAGCCAAAAGTGCCGCAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | TCATCGCAGCAATTCACACAGCCACTATGTCCTTCCCACCCTTGCTGGGAGAATCCTTCGTTTCCTCTCTaGTCTTCTGAGCTACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSQQFTQPLCPSHPCWENPSFPL*SSELLS Trigger: CGACAGTAGCTCAGAAGACAAGAGAGGAAACGAAGG...ATTCTCCCAGCAAGGGTGGGAAGGACATAGTGGCTGTGTGAATTGCTGCGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS TCA 90 bp | TTCCATTCAGCAGAGCTATGGCATAGGATACGGACTCAGGATGCTTaGAGCAGACGAAGCCAAAGGACTTCGGCTTTCCGTCTCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHSAELWHRIRTQDA*SRRSQRTSAFRLCL Trigger: AAGACAGAGACGGAAAGCCGAAGTCCTTTGGCTTCGTCTGCTTCAAGCATCCTGAGTCCGTATCCTATGCCATAGCTCTGCTGAATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTCACACTCACAGAAAGGCGGTaGCAGCACTGGACTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALSICGIILYTWSSQQFTLTERR*QHWTVC Trigger: GCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGAG...TGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGCATTAAGTATATGCGGCATCATTCTGTACACTTGGTCATCGCAGCAATTACTCGGGCCTCTAAATaGCCCACAAACACGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGIKYMRHHSVHLVIAAITRASK*PTNTVL Trigger: CAGGACCGTGTTTGTGGGCAATTTAGAGGCCCGAGT...AATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCATATACTTAATGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS CCA 90 bp | TTCCTGAAGCTGTGTGAGTTAATCTTAGCACAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAGCGAGAACTCCCAAACCGATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLKLCELILAQLSKL*LAGSEERELPNRYC Trigger: GCAGTATCGGTTTGGGAGTTCTCGCTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTGTGCTAAGATTAACTCACACAGCTTCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046378.14 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCTCACAGAAAGGCGGTaGCAGCACTGGACTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSHISIRFQKRQAGQEMDLTERR*QHWTVC Trigger: GCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGAG...ATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGACTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS CCA 90 bp | TGGTTCAGAAGAGCGAGAACTCCCAAACCGATACTGCACATTAATTaGTCTCCCATACAAACGAATTCCATTCAGCAGAGCTATGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: WFRRARTPKPILHIN*SPIQTNSIQQSYGI Trigger: TATGCCATAGCTCTGCTGAATGGAATTCGTTTGTATGGGAGACCAATTAATGTGCAGTATCGGTTTGGGAGTTCTCGCTCTTCTGAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046378.14 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCTTTTCTCACAGAAAGGCGGTaGCAGCACTGGACTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQSCKCKRTTIYYCFKAFLTERR*QHWTVC Trigger: GCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGAG...AAAAGCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS CCA 90 bp | TTCCTGAAGCTGTGTGAGTTAATCTTAGCACAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAGCGAGAATTACCAAACCGATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLKLCELILAQLSKL*LAGSEERELPNRYC Trigger: GCAGTATCGGTTTGGTAATTCTCGCTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTGTGCTAAGATTAACTCACACAGCTTCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114249.8 |
||
| CDS CCA 90 bp | TGGTTCAGAAGAGCGAGAATTACCAAACCGATACTGCACATTAATTaGTCTCCCATACAAACGAATTCCATTCAGCAGAGCTATGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: WFRRARITKPILHIN*SPIQTNSIQQSYGI Trigger: TATGCCATAGCTCTGCTGAATGGAATTCGTTTGTATGGGAGACCAATTAATGTGCAGTATCGGTTTGGTAATTCTCGCTCTTCTGAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114249.8 |
||
| CDS-3UTR CAA 90 bp | GTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCATTACGGACTCAGGATGCTaGAAGCAGACGAAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VIFPYVFKNDKLDKKWIITDSGC*KQTKPK Trigger: CTTTGGCTTCGTCTGCTTCAAGCATCCTGAGTCCGT...AATGATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCTTTTACGGACTCAGGATGCTaGAAGCAGACGAAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQSCKCKRTTIYYCFKAFTDSGC*KQTKPK Trigger: CTTTGGCTTCGTCTGCTTCAAGCATCCTGAGTCCGT...AAAAGCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCATATTTCCATACGTTTTCAAAAACGACAAGCTGGACAAGAAATGGATCCTTCGTTTCCTCTCTaGTCTTCTGAGCTACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSHISIRFQKRQAGQEMDPSFPL*SSELLS Trigger: CGACAGTAGCTCAGAAGACAAGAGAGGAAACGAAGG...ATCCATTTCTTGTCCAGCTTGTCGTTTTTGAAAACGTATGGAAATATGACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGCTTTTCCTTCGTTTCCTCTCTaGTCTTCTGAGCTACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RQSCKCKRTTIYYCFKAFPSFPL*SSELLS Trigger: CGACAGTAGCTCAGAAGACAAGAGAGGAAACGAAGG...AAAAGCCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGGCAATCTTGCAAATGCAAACGCACAACAATATATTACTGTTTCAAGGACAGCTCTCAAAACTTaGGTTAGCTGGTTCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQGNLANANAQQYITVSRTALKT*VSWFRR Trigger: TCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTGT...CCTTGAAACAGTAATATATTGTTGTGCGTTTGCATTTGCAAGATTGCCTTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS CAA 72 bp | GTTGGGAAGTGGGGCTGGCATCTCACAGAAAGGCGGTaGCAGCACTGGACTGTGTGCGTACCATGGCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VGKWGWHLTERR*QHWTVCVPWHF Trigger: AAAATGCCATGGTACGCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGAGATGCCAGCCCCACTTCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS GCA 72 bp | TTGGGAAGTGGGGCTGGCATCTCACAGAAAGGCGGTTaGAGCACTGGACTGTGTGCGTACCATGGCATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSGAGISQKGG*STGLCAYHGIF Trigger: AAAAATGCCATGGTACGCACACAGTCCAGTGCTGCAACCGCCTTTCTGTGAGATGCCAGCCCCACTTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS TCA 72 bp | GCAGAGCTATGGCATAGGATACGGACTCAGGATGCTTaGAGCAGACGAAGCCAAAGGACTTCGGCTTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AELWHRIRTQDA*SRRSQRTSAFR Trigger: ACGGAAAGCCGAAGTCCTTTGGCTTCGTCTGCTTCAAGCATCCTGAGTCCGTATCCTATGCCATAGCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS TCA 72 bp | GCACTTTTGGCTTCCTTCGTTTCCTCTCTTGTCTTCTaGGCTACTGTCGCTGTCGCTGTCTGGCCTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALLASFVSSLVF*ATVAVAVWPLP Trigger: AGGCAAAGGCCAGACAGCGACAGCGACAGTAGCTCAGAAGACAAGAGAGGAAACGAAGGAAGCCAAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS GCA 72 bp | TCTTCTGAGCTACTGTCGCTGTCGCTGTCTGGCCTTTaGCTCTTCCGTTTATTCCTAGGATACAGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSELLSLSLSGL*LFRLFLGYRSG Trigger: CCCTGACCTGTATCCTAGGAATAAACGGAAGAGGCAAAGGCCAGACAGCGACAGCGACAGTAGCTCAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
||
| CDS GCA 72 bp | CGAAGCCAAAGGACTTCGGCTTTCCGTCTCTGTCTTTaGAAAGAGTCACTTTGGTTAGTGGCCCAGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RSQRTSAFRLCL*KESLWLVAQPE Trigger: TTCAGGCTGGGCCACTAACCAAAGTGACTCTTTGCAAAGACAGAGACGGAAAGCCGAAGTCCTTTGGCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS CAA 90 bp | TTCTTTTTACACTTGCGGCACTTTTGGCTTCCTTCGTTTCCTCTCTaGTCTTCTGAGCTACTGTCGCTGTCGCTGTCTGGCCTTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FFLHLRHFWLPSFPL*SSELLSLSLSGLCL Trigger: GAGGCAAAGGCCAGACAGCGACAGCGACAGTAGCTCAGAAGACAAGAGAGGAAACGAAGGAAGCCAAAAGTGCCGCAAGTGTAAAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046378.14 ENSMUST00000114249.8 ENSMUST00000114253.2 |
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| CDS CCA 72 bp | AGAGCGAGAACTCCCAAACCGATACTGCACATTAATTaGTCTCCCATACAAACGAATTCCATTCAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RARTPKPILHIN*SPIQTNSIQQS Trigger: GCTCTGCTGAATGGAATTCGTTTGTATGGGAGACCAATTAATGTGCAGTATCGGTTTGGGAGTTCTCGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046378.14 ENSMUST00000114253.2 |
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| CDS CCA 72 bp | CTGTGTGAGTTAATCTTAGCACAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAGCGAGAACTCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LCELILAQLSKL*LAGSEERELPN Trigger: GTTTGGGAGTTCTCGCTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTGTGCTAAGATTAACTCACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046378.14 ENSMUST00000114253.2 |
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| CDS GCA 72 bp | GCTGGTTCAGAAGAGCGAGAATTACCAAACCGATACTaGACATTAATTGGTCTCCCATACAAACGAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: AGSEERELPNRY*TLIGLPYKRIP Trigger: TGGAATTCGTTTGTATGGGAGACCAATTAATGTGCAGTATCGGTTTGGTAATTCTCGCTCTTCTGAACCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114249.8 |
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| CDS CCA 72 bp | AGAGCGAGAATTACCAAACCGATACTGCACATTAATTaGTCTCCCATACAAACGAATTCCATTCAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RARITKPILHIN*SPIQTNSIQQS Trigger: GCTCTGCTGAATGGAATTCGTTTGTATGGGAGACCAATTAATGTGCAGTATCGGTTTGGTAATTCTCGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114249.8 |
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| CDS CCA 72 bp | CTGTGTGAGTTAATCTTAGCACAGCTCTCAAAACTTTaGTTAGCTGGTTCAGAAGAGCGAGAATTACCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LCELILAQLSKL*LAGSEERELPN Trigger: GTTTGGTAATTCTCGCTCTTCTGAACCAGCTAACCAAAGTTTTGAGAGCTGTGCTAAGATTAACTCACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114249.8 |
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