RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031666

Ensembl transcript IDs: ENSMUST00000034091.8, ENSMUST00000209518.2, ENSMUST00000211136.2

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTGCACGCTTTCACACTGTACAGTACCTACTGGGGAAGGGAGAGTaGGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACACT +
Preference number: 1 (lower is better)
Translates to: IARFHTVQYLLGKGE*VLKGSGALGQGLDT
Trigger: AGTGTCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCCAGTAGGTACTGTACAGTGTGAAAGCGTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR GCA 90 bp CAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTaGCACCAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACA +
Preference number: 1 (lower is better)
Translates to: QQTLGHNAMHLTAIK*HQLHRFLQTLHAFT
Trigger: TGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR GCA 90 bp CATAGAAAGTGCCATCATAAATATACAGCAAACCCTGGGTCACAATaGTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTT +
Preference number: 1 (lower is better)
Translates to: HRKCHHKYTANPGSQ*YASYSHKVPPITQV
Trigger: AACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGTATATTTATGATGGCACTTTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTGCTAACCAGTTCATGTaGAGACAGTTTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSANQFM*RQFPPG
Trigger: TCCAGGAGGAAACTGTCTTCACATGAACTGGTTAGC...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACATTTGCTGCCACACTaGGTCAGAAGCGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGHLLPH*VRSASL
Trigger: AAGGGAAGCGCTTCTGACTCAGTGTGGCAGCAAATG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTAAGAGGCAACTGGGATaGAAAATAGTCAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCKRQLG*KIVKGQ
Trigger: CTGTCCTTTGACTATTTTTCATCCCAGTTGCCTCTT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR CCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCAAAACCCCAAGTTTaGATTCTGAGCCGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSSKPQV*ILSRVE
Trigger: TTCAACACGGCTCAGAATCCAAACTTGGGGTTTTGA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCCGGTTCTTTGTTTTTaGGTAAGGGTTACATGTAGT +
Preference number: 2 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLPVLCF*VRVTCS
Trigger: ACTACATGTAACCCTTACTCAAAAACAAAGAACCGG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCATTTGCTGCCACACTaGGTCAGAAGCGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAHLLPH*VRSASL
Trigger: AAGGGAAGCGCTTCTGACTCAGTGTGGCAGCAAATG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACTGGGGAAGGGAGAGTaGGTGCTCAAGGGATCAGGA +
Preference number: 2 (lower is better)
Translates to: TANPGSQCYASYSHKVPPLGKGE*VLKGSG
Trigger: TCCTGATCCCTTGAGCACTCACTCTCCCTTCCCCAG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCCTGGGGAAGGGAGAGTaGGTGCTCAAGGGATCAGGA +
Preference number: 2 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFLGKGE*VLKGSG
Trigger: TCCTGATCCCTTGAGCACTCACTCTCCCTTCCCCAG...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR GCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCCTCCTTTAATCAGTTaGTGGATTCAGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAPPLIS*WIQEQG
Trigger: ACCTTGCTCCTGAATCCAGCAACTGATTAAAGGAGG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR GCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAAGTTGCCCTCAGACATaGTGTATTGCTCAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: TANPGSQCYASYSHKVPPSCPQT*CIAQVG
Trigger: GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACT...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATACAGTTCCTCTCCTaGGGCCTACCTACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: TANPGSQCYASYSHKVPPIQFLS*GLPTKA
Trigger: GGCTTTTGTAGGTAGGCCCCAGGAGAGGAACTGTAT...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGCTAACCAGTTCATGTaGAGACAGTTTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLANQFM*RQFPPG
Trigger: TCCAGGAGGAAACTGTCTTCACATGAACTGGTTAGC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTGCTAACCAGTTCATGTaGAGACAGTTTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTANQFM*RQFPPG
Trigger: TCCAGGAGGAAACTGTCTTCACATGAACTGGTTAGC...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCCCTCCTTTAATCAGTTaGTGGATTCAGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFPPLIS*WIQEQG
Trigger: ACCTTGCTCCTGAATCCAGCAACTGATTAAAGGAGG...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR GCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTCCTCCTTTAATCAGTTaGTGGATTCAGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTPPLIS*WIQEQG
Trigger: ACCTTGCTCCTGAATCCAGCAACTGATTAAAGGAGG...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCACATGTAGTCCAAGTTaGCCTCAGACATGCTGTATT +
Preference number: 2 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFTCSPS*PQTCCI
Trigger: AATACAGCATGTCTGAGGGCAACTTGGACTACATGT...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTACCGGTTCTTTGTTTTTaGGTAAGGGTTACATGTAGT +
Preference number: 2 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLPVLCF*VRVTCS
Trigger: ACTACATGTAACCCTTACTCAAAAACAAAGAACCGG...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR TCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTAAGAGGCAACTGGGATaGAAAATAGTCAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTKRQLG*KIVKGQ
Trigger: CTGTCCTTTGACTATTTTTCATCCCAGTTGCCTCTT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR CCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACGTTTGTAAATGTCTCTaGGTTTTCATCCTAAAACAC +
Preference number: 2 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYVCKCL*VFILKH
Trigger: GTGTTTTAGGATGAAAACCCAGAGACATTTACAAAC...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR CCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCGTTTGTAAATGTCTCTaGGTTTTCATCCTAAAACAC +
Preference number: 2 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFVCKCL*VFILKH
Trigger: GTGTTTTAGGATGAAAACCCAGAGACATTTACAAAC...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR TCA 72 bp TTTCACACTGTACAGTACCTACTGGGGAAGGGAGAGTaGGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: FHTVQYLLGKGE*VLKGSGALGQG
Trigger: GCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCCAGTAGGTACTGTACAGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR CCA 72 bp AGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTaGATTCAGGAGCAAGGTTCCGTAGTCCTGCATGCA +
Preference number: 3 (lower is better)
Translates to: SASLLSPPLISC*IQEQGSVVLHA
Trigger: TGCATGCAGGACTACGGAACCTTGCTCCTGAATCCAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR GCA 72 bp AGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTaGTGGATTCAGGAGCAAGGTTCCGTAGTCCTGCAT +
Preference number: 3 (lower is better)
Translates to: RSASLLSPPLIS*WIQEQGSVVLH
Trigger: ATGCAGGACTACGGAACCTTGCTCCTGAATCCAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR GCA 72 bp GTAAGGGTTACATGTAGTCCAAGTTGCCCTCAGACATaGTGTATTGCTCAGGTTGGCCTTAAACTCCTGGTC +
Preference number: 3 (lower is better)
Translates to: VRVTCSPSCPQT*CIAQVGLKLLV
Trigger: GACCAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR GCA 72 bp CTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTaGCACCAATTACACAGGTTCCTTCAGACATTGCAC +
Preference number: 3 (lower is better)
Translates to: LGHNAMHLTAIK*HQLHRFLQTLH
Trigger: GTGCAATGTCTGAAGGAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR-3UTR CAA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCAAAGCCTCTAAAGATTaGCTTCCTGCAGTACTTGTA +
Preference number: 3 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFKASKD*LPAVLV
Trigger: TACAAGTACTGCAGGAAGCAAATCTTTAGAGGCTTT...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR TCA 72 bp TTTCTTACCAAAACATCCCTTCCGGTTCTTTGTTTTTaGGTAAGGGTTACATGTAGTCCAAGTTGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: FLTKTSLPVLCF*VRVTCSPSCPQ
Trigger: CTGAGGGCAACTTGGACTACATGTAACCCTTACTCAAAAACAAAGAACCGGAAGGGATGTTTTGGTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTTCATGCTGCGGTAGCTaGTCCAGGCCTCGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCSCCGS*SRPRRA
Trigger: CGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGA...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTCCGCCTCGTCCATGTTaGGGCGGCTGCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSPPRPC*GGCTAP
Trigger: AGGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGG...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTAGCACAGCTTCTCAATaGCACACGGCGGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCSTASQ*HTAGRR
Trigger: CCTCCGACCCGCCGTGTGTCATTGAGAAGCTGTGCT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCACTGGGTGCATTCCTaGGGCCGGACAGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCHWVHS*GRTAWC
Trigger: ACACCATGCTGTCCGGCCTCAGGAATGCACCCAGTG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTAGCTCTCGCTCATGCTaGGGTAGCTGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLSSRSC*GSCSRP
Trigger: AGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCT...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTAGCTCTCGCTCATGCTaGGGTAGCTGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSSSRSC*GSCSRP
Trigger: AGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCT...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTACGGCTCAGGCTGTGTaGAGCTGTGGAGACGGGAGT +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCTAQAV*SCGDGS
Trigger: ACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGCCGGATACTGCTGCTaGTTAGTGGCTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLAGYCC*LVAGLG
Trigger: ACCCAGGCCAGCCACTAACCAGCAGCAGTATCCGGC...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCLESLG*QSSDRP
Trigger: AGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAA...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTGTCCATTGTTGGCCGTaGCAGTGGCTGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSVHCWP*QWLLPW
Trigger: CCATGGCAACAGCCACTGTCACGGCCAACAATGGAC...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTAGCTCTCGCTCATaGTGCGGTAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSCSSRS*CGSCSR
Trigger: CCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCAGACTTCCAGCCAGTaGTTGAGCACTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCQTSSQ*LSTEGL
Trigger: CAGCCCCTCAGTGCTCAAGCACTGGCTGGAAGTCTG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTCTGGCTCCGGGCCTGTaGCTGAGTTCTGTAACAACG +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSLAPGL*LSSVTT
Trigger: CGTTGTTACAGAACTCAGCCACAGGCCCGGAGCCAG...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTGTCCAGGAACTGGTGTaGCAGAAACAGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCVQELV*QKQSPQ
Trigger: CTGGGGAGACTGTTTCTGTCACACCAGTTCCTGGAC...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTACCGGACCAGGGACTTaGAAAGTGGTTCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCTGPGT*KVVPVT
Trigger: GGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCCTCACGCCAGTCAGTaGTGTGCAGACTCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLPHASQ*CADSKC
Trigger: GCACTTAGAGTCTGCACACCACTGACTGGCGTGAGG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAGCCGGATACTGCTGCTaGTTAGTGGCTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGAGYCC*LVAGLG
Trigger: ACCCAGGCCAGCCACTAACCAGCAGCAGTATCCGGC...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCTGTCAGCGATAGCCTaGGTTGGATCTCGGGAACAT +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLLSAIA*VGSREH
Trigger: ATGTTCCCGAGATCCAACTCAGGCTATCGCTGACAG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAGTCCATTGTTGGCCGTaGCAGTGGCTGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGVHCWP*QWLLPW
Trigger: CCATGGCAACAGCCACTGTCACGGCCAACAATGGAC...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACTTCCAGCCAGTGCTTaGGCACTGAGGGGCTGGATA +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGLPASA*ALRGWI
Trigger: TATCCAGCCCCTCAGTGCTCAAGCACTGGCTGGAAG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTCATGCTGCGGTAGCTaGTCCAGGCCTCGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLASCCGS*SRPRRA
Trigger: CGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACAGCTTCTCACTGGGTaGATTCCTGAGGCCGGACAG +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGQLLTG*IPEAGQ
Trigger: CTGTCCGGCCTCAGGAATGCACCCAGTGAGAAGCTG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCAGGGACTTGCAAAGTaGTTCCTGTCACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLQGLAK*FLSPVG
Trigger: CCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCCGCCTCGTCCATGTTaGGGCGGCTGCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAPPRPC*GGCTAP
Trigger: AGGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGACGGCTCAGGCTGTGTaGAGCTGTGGAGACGGGAGT +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEATAQAV*SCGDGS
Trigger: ACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGT...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACGTGACAGTGGCTGTTaGCATGGTGACCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGRDSGC*HGDQGL
Trigger: CAGACCTTGGTCACCATGGCAACAGCCACTGTCACG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTGTTCCTTTATCCCCTTaGCCTCCAACACTAGACCGT +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSVPLSP*PPTLDR
Trigger: ACGGTCTAGTGTTGGAGGCCAAGGGGATAAAGGAAC...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGGGCTGTGTGCAGCTGTaGAGACGGGAGTCACACACG +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEAGCVQL*RRESHT
Trigger: CGTGTGTGACTCCCGTCTCCACAGCTGCACACAGCC...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTCCCAGGAGGCTTATaGGAAAAAGCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSFPGGL*EKATTS
Trigger: TGAGGTGGTCGCTTTTTCCCATAAGCCTCCTGGGAA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCCCACAGTGGGGACTTaGTTTTCCATGCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLPTVGT*FSMPNG
Trigger: ACCATTTGGCATGGAAAACCAAGTCCCCACTGTGGG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGGTCTGTCCAGGAACTaGTGTGACAGAAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLGLSRN*CDRNSL
Trigger: GAGACTGTTTCTGTCACACCAGTTCCTGGACAGACC...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGGAGCCAGCGACAGCCTaGGCCTGGCCCCCAACGTTG +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLEPATA*AWPPTL
Trigger: CAACGTTGGGGGCCAGGCCCAGGCTGTCGCTGGCTC...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTGCACACATCAACAGCTaGTCCAGATGTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCAHINS*SRCLSI
Trigger: GATGGACAGACATCTGGACCAGCTGTTGATGTGTGC...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGCCTGTTCTTACAAATaGATAGGGAGAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLACSYK*IGREGR
Trigger: CCTCCCCTCTCTCCCTATCCATTTGTAAGAACAGGC...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTCATTCGCCACATCCTaGAGACGACGTAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLSFATS*RRRNRA
Trigger: TGCTCTGTTACGTCGTCTCCAGGATGTGGCGAATGA...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTGTTCTCTCTAGGTTTTaGGGTGGCATGACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCVLSRF*GGMTSS
Trigger: TGAAGAGGTCATGCCACCTCAAAACCTAGAGAGAAC...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCATCATGCTGCGGTAGCTaGTCCAGGCCTCGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPSCCGS*SRPRRA
Trigger: CGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGA...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGTGTAGCTCTCGCTCATaGTGCGGTAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEACSSRS*CGSCSR
Trigger: CCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACA...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCTTCAGCGGTCCCTTTaGTCACAGTTGGAACAGATT +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLLQRSL*SQLEQI
Trigger: AATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCCTCTTCCTCCGAGCTaGCTGCAGCAGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAPLPPS*LQQLEE
Trigger: CTCCTCCAGCTGCTGCAGCCAGCTCGGAGGAAGAGG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTTTCTTCCTCTTTGCTaGCGAGGCTGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLFLPLC*RGCSSW
Trigger: CCAAGAAGAACAGCCTCGCCAGCAAAGAGGAAGAAA...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTGGCAATACCTTGGACTaGAATGGTCACTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSGNTLD*NGHCLS
Trigger: GGACAAACAGTGACCATTCCAGTCCAAGGTATTGCC...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGAGCCAGCGACAGCCTaGGCCTGGCCCCCAACGTTG +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPEPATA*AWPPTL
Trigger: CAACGTTGGGGGCCAGGCCCAGGCTGTCGCTGGCTC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGTGGATCTCGGGAACATaGCCTGAGTATCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEAWISGT*PEYPLQ
Trigger: CTGGAGCGGATACTCAGGTCATGTTCCCGAGATCCA...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGTGGCTGTTGCCATGGTaGCCAAGGTCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEAWLLPW*PRSVQE
Trigger: TTCCTGGACAGACCTTGGTCACCATGGCAACAGCCA...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTCTGTAACAACGCATaGTGTTCTGGAAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSFCNNA*CSGRTC
Trigger: ACAGGTCCTTCCAGAACATCATGCGTTGTTACAGAA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGATTCTTTTTGCAGGTaGTTCACTTCCGTCGTCCAA +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLDSFCR*FTSVVQ
Trigger: TTGGACGACGGAAGTGAATCACCTGCAAAAAGAATC...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTGTCAAGATGCTGCTaGAAGATGTCTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSLSRCC*KMSLIC
Trigger: GCAGATGAGAGACATCTTGCAGCAGCATCTTGACAA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCTGTGGAATGCGTCATaGTCCAGAACACCAGATAAA +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLLWNAS*SRTPDK
Trigger: TTTATCTGGTGTTCTGGAGCATGACGCATTCCACAG...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGACCGGACCAGGGACTTaGAAAGTGGTTCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEATGPGT*KVVPVT
Trigger: GGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGT...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGCCTCTTCCTCCGAGCTaGCTGCAGCAGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLPLPPS*LQQLEE
Trigger: CTCCTCCAGCTGCTGCAGCCAGCTCGGAGGAAGAGG...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCTCTTCCTCCGAGCTaGCTGCAGCAGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGPLPPS*LQQLEE
Trigger: CTCCTCCAGCTGCTGCAGCCAGCTCGGAGGAAGAGG...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGATTCCCAGGAGGCTTATaGGAAAAAGCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGFPGGL*EKATTS
Trigger: TGAGGTGGTCGCTTTTTCCCATAAGCCTCCTGGGAA...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAGGTCTGTCCAGGAACTaGTGTGACAGAAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGGLSRN*CDRNSL
Trigger: GAGACTGTTTCTGTCACACCAGTTCCTGGACAGACC...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTAGCAGAGTGATTCTCTaGGCAGATTCTTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLSRVIL*ADSFCR
Trigger: CCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCT...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGCACTGGGTGCATTCCTaGGGCCGGACAGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLHWVHS*GRTAWC
Trigger: ACACCATGCTGTCCGGCCTCAGGAATGCACCCAGTG...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCGCAGCAGGCCAAGAGTaGCCTGTGGAATGCGTCATG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAAAGQE*PVECVM
Trigger: CATGACGCATTCCACAGGTCACTCTTGGCCTGCTGC...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCAGGGGAAATCTGTTaGATGGCCACCGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGPGEIC*MATGPG
Trigger: CCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGG...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACGTAACAGAGCAGAGTaGTTCTCTGGGCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGRNRAE*FSGQIL
Trigger: AAGAATCTGCCCAGAGAATCACTCTGCTCTGTTACG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCACGGCTCAGGCTGTGTaGAGCTGTGGAGACGGGAGT +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGTAQAV*SCGDGS
Trigger: ACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGT...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGGGCTGTGTGCAGCTGTaGAGACGGGAGTCACACACG +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLGCVQL*RRESHT
Trigger: CGTGTGTGACTCCCGTCTCCACAGCTGCACACAGCC...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTTGCCATCACATAAATaGCACACATCAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLLPSHK*HTSTAG
Trigger: ACCAGCTGTTGATGTGTGCCATTTATGTGATGGCAA...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR CAA 72 bp TGTATTGCTCAGGTTGGCCTTAAACTCCTGGTCCTCTaGTCCCCTACCCCTTGGGTGATGGGATACCAGGCA +
Preference number: 4 (lower is better)
Translates to: CIAQVGLKLLVL*SPTPWVMGYQA
Trigger: TGCCTGGTATCCCATCACCCAAGGGGTAGGGGACAAGAGGACCAGGAGTTTAAGGCCAACCTGAGCAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR CAA 72 bp GTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTaGGCCTTAAACTCCTGGTCCTCTTGTCCCCTACCC +
Preference number: 4 (lower is better)
Translates to: VQVALRHAVLLR*ALNSWSSCPLP
Trigger: GGGTAGGGGACAAGAGGACCAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCCCGCCTCGTCCATGTTaGGGCGGCTGCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFPPRPC*GGCTAP
Trigger: AGGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGG...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGLESLG*QSSDRP
Trigger: AGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAA...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTGGATCTCGGGAACATaGCCTGAGTATCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAWISGT*PEYPLQ
Trigger: CTGGAGCGGATACTCAGGTCATGTTCCCGAGATCCA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTGGCTGTTGCCATGGTaGCCAAGGTCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAWLLPW*PRSVQE
Trigger: TTCCTGGACAGACCTTGGTCACCATGGCAACAGCCA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGCTTCCAGCCAGTGCTTaGGCACTGAGGGGCTGGATA +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLLPASA*ALRGWI
Trigger: TATCCAGCCCCTCAGTGCTCAAGCACTGGCTGGAAG...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACCAGGGGAAATCTGTTaGATGGCCACCGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPPGEIC*MATGPG
Trigger: CCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTACCTGTCTTCTTTTGTaGCCTTTGCCATCACATAAA +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSTCLLL*PLPSHK
Trigger: TTTATGTGATGGCAAAGGTCACAAAAGAAGACAGGT...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGATTCTGTAACAACGCATaGTGTTCTGGAAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGFCNNA*CSGRTC
Trigger: ACAGGTCCTTCCAGAACATCATGCGTTGTTACAGAA...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCTGTAGCTCTCGCTCATaGTGCGGTAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGCSSRS*CGSCSR
Trigger: CCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACA...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTGCAGACTCTAAGTaGTTTAGACTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSCADSK*FRLVKM
Trigger: CATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACTGTGGAATGCGTCATaGTCCAGAACACCAGATAAA +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGLWNAS*SRTPDK
Trigger: TTTATCTGGTGTTCTGGAGCATGACGCATTCCACAG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCGTGACAGTGGCTGTTaGCATGGTGACCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLARDSGC*HGDQGL
Trigger: CAGACCTTGGTCACCATGGCAACAGCCACTGTCACG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGACGTTCTCGGAAATGTaGGGGCAGATTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEATFSEM*GQICHV
Trigger: GACATGGCAAATCTGCCCCCACATTTCCGAGAACGT...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGATCCCTCCATTTTCGTTaGCAATACCTTGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGSLHFR*QYLGLE
Trigger: TTCCAGTCCAAGGTATTGCCAACGAAAATGGAGGGA...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGCTGGCTCCGGGCCTGTaGCTGAGTTCTGTAACAACG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLLAPGL*LSSVTT
Trigger: CGTTGTTACAGAACTCAGCCACAGGCCCGGAGCCAG...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGACCTCATCACTGGGCTaGAATCTCTACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEATSSLG*NLYWLC
Trigger: ACAGAGCCAGTAGAGATTCCAGCCCAGTGATGAGGT...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTTGCTTCGTTGTTATGTaGGGAAATGTAGATAGGATG +
Preference number: 4 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLCFVVM*GNVDRM
Trigger: CATCCTATCTACATTTCCCCACATAACAACGAAGCA...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTCTGGCTGGAAATGCTaGGAATATATTTCGTACATT +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSSGWKC*EYISYI
Trigger: AATGTACGAAATATATTCTCAGCATTTCCAGCCAGA...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGGTCCAGGAACTGGTGTaGCAGAAACAGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLVQELV*QKQSPQ
Trigger: CTGGGGAGACTGTTTCTGTCACACCAGTTCCTGGAC...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACTTCCAGCCAGTGCTTaGGCACTGAGGGGCTGGATA +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPLPASA*ALRGWI
Trigger: TATCCAGCCCCTCAGTGCTCAAGCACTGGCTGGAAG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGCGTAACAGAGCAGAGTaGTTCTCTGGGCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEARNRAE*FSGQIL
Trigger: AAGAATCTGCCCAGAGAATCACTCTGCTCTGTTACG...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCGTGACAGTGGCTGTTaGCATGGTGACCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGRDSGC*HGDQGL
Trigger: CAGACCTTGGTCACCATGGCAACAGCCACTGTCACG...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCACCGGACCAGGGACTTaGAAAGTGGTTCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGTGPGT*KVVPVT
Trigger: GGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGT...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGTTTCTTCCTCTTTGCTaGCGAGGCTGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEAFLPLC*RGCSSW
Trigger: CCAAGAAGAACAGCCTCGCCAGCAAAGAGGAAGAAA...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGGGAAAATTTCTGATGTaGTACAGGGCTGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEAGKFLM*YRAVAS
Trigger: AGAGGCGACAGCCCTGTACCACATCAGAAATTTTCC...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTAGCACCCAGCAAAAATaGAAAATTTCTGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCSTQQK*KISDVV
Trigger: TACCACATCAGAAATTTTCCATTTTTGCTGGGTGCT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCTCACGCCAGTCAGTaGTGTGCAGACTCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGPHASQ*CADSKC
Trigger: GCACTTAGAGTCTGCACACCACTGACTGGCGTGAGG...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCAGGGACTTGCAAAGTaGTTCCTGTCACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAQGLAK*FLSPVG
Trigger: CCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACAGCACAGCTTCTCAATaGCACACGGCGGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYSTASQ*HTAGRR
Trigger: CCTCCGACCCGCCGTGTGTCATTGAGAAGCTGTGCT...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACCACTGGGTGCATTCCTaGGGCCGGACAGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYHWVHS*GRTAWC
Trigger: ACACCATGCTGTCCGGCCTCAGGAATGCACCCAGTG...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGCTGTCAGCGATAGCCTaGGTTGGATCTCGGGAACAT +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLLSAIA*VGSREH
Trigger: ATGTTCCCGAGATCCAACTCAGGCTATCGCTGACAG...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACCCAGGGGAAATCTGTTaGATGGCCACCGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYPGEIC*MATGPG
Trigger: CCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGG...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCACGTATTCTTCATATaGCTTATTAACGGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCHVFFI*LINGLK
Trigger: TTTAAGGCCGTTAATAAGGCATATGAAGAATACGTG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTCACGTATTCTTCATATaGCTTATTAACGGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSHVFFI*LINGLK
Trigger: TTTAAGGCCGTTAATAAGGCATATGAAGAATACGTG...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGATGTGCAGACTCTAAGTaGTTTAGACTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGCADSK*FRLVKM
Trigger: CATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACA...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGGGATGCGCCCAGATGTaGTTCCTTCAGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLGCAQM*FLQRDY
Trigger: ATAGTCCCTCTGAAGGAAGCACATCTGGGCGCATCC...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCGTCTGCGCGTTTGCCTaGGAGTACTTCATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGVCAFA*EYFMAN
Trigger: GTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGAC...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTACTAAAATTCTCATCTaGCTGGAAATGCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCTKILI*LEMLRI
Trigger: TATTCTCAGCATTTCCAGCCAGATGAGAATTTTAGT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTCCCAGGAGGCTTATaGGAAAAAGCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAFPGGL*EKATTS
Trigger: TGAGGTGGTCGCTTTTTCCCATAAGCCTCCTGGGAA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGGGGAAATCTGTTGAATaGCCACCGGACCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLGKSVE*PPDQGL
Trigger: AAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCC...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGGGGAAATCTGTTGAATaGCCACCGGACCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLGKSVE*PPDQGL
Trigger: AAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCC...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTATAAGTTCGGTGCACTaGATTATAGAGAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCISSVH*IIENSK
Trigger: CTTTGAATTCTCTATAATCCAGTGCACCGAACTTAT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCACCTCATCACTGGGCTaGAATCTCTACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLATSSLG*NLYWLC
Trigger: ACAGAGCCAGTAGAGATTCCAGCCCAGTGATGAGGT...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCGCCTGTTCTTACAAATaGATAGGGAGAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAACSYK*IGREGR
Trigger: CCTCCCCTCTCTCCCTATCCATTTGTAAGAACAGGC...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCGCACATGCTAACCAATaGAGGTCATTTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGAHANQ*RSFPSS
Trigger: GCTGGAGGGAAATGACCTTCATTGGTTAGCATGTGC...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFLESLG*QSSDRP
Trigger: AGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTAGCACAGCTTCTCAATaGCACACGGCGGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTSTASQ*HTAGRR
Trigger: CCTCCGACCCGCCGTGTGTCATTGAGAAGCTGTGCT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGCAGCAGGCCAAGAGTaGCCTGTGGAATGCGTCATG +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLAAGQE*PVECVM
Trigger: CATGACGCATTCCACAGGTCACTCTTGGCCTGCTGC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACGCAGCAGGCCAAGAGTaGCCTGTGGAATGCGTCATG +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYAAGQE*PVECVM
Trigger: CATGACGCATTCCACAGGTCACTCTTGGCCTGCTGC...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGTCCATTGTTGGCCGTaGCAGTGGCTGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLVHCWP*QWLLPW
Trigger: CCATGGCAACAGCCACTGTCACGGCCAACAATGGAC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCGTAACAGAGCAGAGTaGTTCTCTGGGCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLARNRAE*FSGQIL
Trigger: AAGAATCTGCCCAGAGAATCACTCTGCTCTGTTACG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACCAGCTTCTCACTGGGTaGATTCCTGAGGCCGGACAG +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYQLLTG*IPEAGQ
Trigger: CTGTCCGGCCTCAGGAATGCACCCAGTGAGAAGCTG...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCCAGCTTCTCACTGGGTaGATTCCTGAGGCCGGACAG +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFQLLTG*IPEAGQ
Trigger: CTGTCCGGCCTCAGGAATGCACCCAGTGAGAAGCTG...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCCAGACTTCCAGCCAGTaGTTGAGCACTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFQTSSQ*LSTEGL
Trigger: CAGCCCCTCAGTGCTCAAGCACTGGCTGGAAGTCTG...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAAGCACCCAGCAAAAATaGAAAATTTCTGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGSTQQK*KISDVV
Trigger: TACCACATCAGAAATTTTCCATTTTTGCTGGGTGCT...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGCCCACAGTGGGGACTTaGTTTTCCATGCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLPTVGT*FSMPNG
Trigger: ACCATTTGGCATGGAAAACCAAGTCCCCACTGTGGG...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACAGGGACTTGCAAAGTaGTTCCTGTCACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPQGLAK*FLSPVG
Trigger: CCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGGGAAATCTGTTGAATaGCCACCGGACCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPGKSVE*PPDQGL
Trigger: AAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACCTGGCTCCGGGCCTGTaGCTGAGTTCTGTAACAACG +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYLAPGL*LSSVTT
Trigger: CGTTGTTACAGAACTCAGCCACAGGCCCGGAGCCAG...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGACCTCATCACTGGGCTaGAATCTCTACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLTSSLG*NLYWLC
Trigger: ACAGAGCCAGTAGAGATTCCAGCCCAGTGATGAGGT...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCTCATTCGCCACATCCTaGAGACGACGTAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGSFATS*RRRNRA
Trigger: TGCTCTGTTACGTCGTCTCCAGGATGTGGCGAATGA...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR CAA 72 bp CAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTaGCTGGATTCAGGAGCAAGGTTCCGTAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QKRFPFIPSFNQ*LDSGARFRSPA
Trigger: TGCAGGACTACGGAACCTTGCTCCTGAATCCAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGCACATGCTAACCAATaGAGGTCATTTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPAHANQ*RSFPSS
Trigger: GCTGGAGGGAAATGACCTTCATTGGTTAGCATGTGC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGTTGGAACAGATTTTCTaGAAGCCACATATAAGGCAC +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEALEQIF*KPHIRH
Trigger: GTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAA...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTCAGCGGTCCCTTTaGTCACAGTTGGAACAGATT +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGLQRSL*SQLEQI
Trigger: AATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAG...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAACGTTCTCGGAAATGTaGGGGCAGATTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPTFSEM*GQICHV
Trigger: GACATGGCAAATCTGCCCCCACATTTCCGAGAACGT...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGGGAAAATTTCTGATGTaGTACAGGGCTGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLGKFLM*YRAVAS
Trigger: AGAGGCGACAGCCCTGTACCACATCAGAAATTTTCC...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCCCTCACGCCAGTCAGTaGTGTGCAGACTCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFPHASQ*CADSKC
Trigger: GCACTTAGAGTCTGCACACCACTGACTGGCGTGAGG...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAACTAAAATTCTCATCTaGCTGGAAATGCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGTKILI*LEMLRI
Trigger: TATTCTCAGCATTTCCAGCCAGATGAGAATTTTAGT...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACCCACAGTGGGGACTTaGTTTTCCATGCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPPTVGT*FSMPNG
Trigger: ACCATTTGGCATGGAAAACCAAGTCCCCACTGTGGG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGAGTAGTGCTGACTGTTaGGGAGCTGTACCTGTCATA +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLSSADC*GAVPVI
Trigger: TATGACAGGTACAGCTCCCCAACAGTCAGCACTACT...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGCCTGTTCTTACAAATaGATAGGGAGAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPACSYK*IGREGR
Trigger: CCTCCCCTCTCTCCCTATCCATTTGTAAGAACAGGC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGTTCTCTCTAGGTTTTaGGGTGGCATGACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPVLSRF*GGMTSS
Trigger: TGAAGAGGTCATGCCACCTCAAAACCTAGAGAGAAC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTGGCTGTTGCCATGGTaGCCAAGGTCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTWLLPW*PRSVQE
Trigger: TTCCTGGACAGACCTTGGTCACCATGGCAACAGCCA...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTCCGTATCATACTGTTaGTTTCCCTCAGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLASVSYC*FPSVSL
Trigger: CAAAGAGACTGAGGGAAATCAACAGTATGATACGGA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGTTGTCAAGATGCTGCTaGAAGATGTCTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLLSRCC*KMSLIC
Trigger: GCAGATGAGAGACATCTTGCAGCAGCATCTTGACAA...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGCTGTGGAATGCGTCATaGTCCAGAACACCAGATAAA +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLLWNAS*SRTPDK
Trigger: TTTATCTGGTGTTCTGGAGCATGACGCATTCCACAG...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGGATGCGCCCAGATGTaGTTCCTTCAGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLGCAQM*FLQRDY
Trigger: ATAGTCCCTCTGAAGGAAGCACATCTGGGCGCATCC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCGGATGCGCCCAGATGTaGTTCCTTCAGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFGCAQM*FLQRDY
Trigger: ATAGTCCCTCTGAAGGAAGCACATCTGGGCGCATCC...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGTCTGCGCGTTTGCCTaGGAGTACTTCATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLVCAFA*EYFMAN
Trigger: GTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGAC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACGTCTGCGCGTTTGCCTaGGAGTACTTCATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYVCAFA*EYFMAN
Trigger: GTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGAC...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGGCAATACCTTGGACTaGAATGGTCACTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPGNTLD*NGHCLS
Trigger: GGACAAACAGTGACCATTCCAGTCCAAGGTATTGCC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGTCCCTCCATTTTCGTTaGCAATACCTTGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLSLHFR*QYLGLE
Trigger: TTCCAGTCCAAGGTATTGCCAACGAAAATGGAGGGA...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCACCTGTCTTCTTTTGTaGCCTTTGCCATCACATAAA +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLATCLLL*PLPSHK
Trigger: TTTATGTGATGGCAAAGGTCACAAAAGAAGACAGGT...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGTCCGTATCATACTGTTaGTTTCCCTCAGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLSVSYC*FPSVSL
Trigger: CAAAGAGACTGAGGGAAATCAACAGTATGATACGGA...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCTTAGACTTGTCAAGATaGTGCTGCAAGATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGLDLSR*CCKMSL
Trigger: GAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAA...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGTTCCTTTATCCCCTTaGCCTCCAACACTAGACCGT +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLVPLSP*PPTLDR
Trigger: ACGGTCTAGTGTTGGAGGCCAAGGGGATAAAGGAAC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGACTAAAATTCTCATCTaGCTGGAAATGCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEATKILI*LEMLRI
Trigger: TATTCTCAGCATTTCCAGCCAGATGAGAATTTTAGT...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCGGTCTGTCCAGGAACTaGTGTGACAGAAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFGLSRN*CDRNSL
Trigger: GAGACTGTTTCTGTCACACCAGTTCCTGGACAGACC...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGATAAGTTCGGTGCACTaGATTATAGAGAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: YPLGDGIPGICCHTESEAISSVH*IIENSK
Trigger: CTTTGAATTCTCTATAATCCAGTGCACCGAACTTAT...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGTTGCCATCACATAAATaGCACACATCAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLLPSHK*HTSTAG
Trigger: ACCAGCTGTTGATGTGTGCCATTTATGTGATGGCAA...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTCATTCGCCACATCCTaGAGACGACGTAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYSFATS*RRRNRA
Trigger: TGCTCTGTTACGTCGTCTCCAGGATGTGGCGAATGA...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
3UTR CAA 72 bp TTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATaGCTCAGGTTGGCCTTAAACTCCTGGTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LHVVQVALRHAV*LRLALNSWSSC
Trigger: ACAAGAGGACCAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTCTGGCTGGAAATGCTaGGAATATATTTCGTACATT +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLASGWKC*EYISYI
Trigger: AATGTACGAAATATATTCTCAGCATTTCCAGCCAGA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACGTTCTCTCTAGGTTTTaGGGTGGCATGACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYVLSRF*GGMTSS
Trigger: TGAAGAGGTCATGCCACCTCAAAACCTAGAGAGAAC...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTGTTGTAGAACTGAATaGGGTCTCCTCGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYCCRTE*GLLVPP
Trigger: AGGAGGAACGAGGAGACCTCATTCAGTTCTACAACA...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGTTGGAACAGATTTTCTaGAAGCCACATATAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLLEQIF*KPHIRH
Trigger: GTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAA...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACCTTCAGCGGTCCCTTTaGTCACAGTTGGAACAGATT +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYLQRSL*SQLEQI
Trigger: AATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAG...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTACGTTCTCGGAAATGTaGGGGCAGATTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTTFSEM*GQICHV
Trigger: GACATGGCAAATCTGCCCCCACATTTCCGAGAACGT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTTTCTTCCTCTTTGCTaGCGAGGCTGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFFLPLC*RGCSSW
Trigger: CCAAGAAGAACAGCCTCGCCAGCAAAGAGGAAGAAA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACGGAAAATTTCTGATGTaGTACAGGGCTGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYGKFLM*YRAVAS
Trigger: AGAGGCGACAGCCCTGTACCACATCAGAAATTTTCC...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACAGTAGTGCTGACTGTTaGGGAGCTGTACCTGTCATA +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYSSADC*GAVPVI
Trigger: TATGACAGGTACAGCTCCCCAACAGTCAGCACTACT...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGGCAATACCTTGGACTaGAATGGTCACTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLGNTLD*NGHCLS
Trigger: GGACAAACAGTGACCATTCCAGTCCAAGGTATTGCC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTGCACACATCAACAGCTaGTCCAGATGTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTAHINS*SRCLSI
Trigger: GATGGACAGACATCTGGACCAGCTGTTGATGTGTGC...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGTGCTTCGTTGTTATGTaGGGAAATGTAGATAGGATG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLCFVVM*GNVDRM
Trigger: CATCCTATCTACATTTCCCCACATAACAACGAAGCA...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCTGCTTCGTTGTTATGTaGGGAAATGTAGATAGGATG +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGCFVVM*GNVDRM
Trigger: CATCCTATCTACATTTCCCCACATAACAACGAAGCA...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTTCTGTAACAACGCATaGTGTTCTGGAAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFFCNNA*CSGRTC
Trigger: ACAGGTCCTTCCAGAACATCATGCGTTGTTACAGAA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTGTTGTAGAACTGAATaGGGTCTCCTCGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTCCRTE*GLLVPP
Trigger: AGGAGGAACGAGGAGACCTCATTCAGTTCTACAACA...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGATTCTTTTTGCAGGTaGTTCACTTCCGTCGTCCAA +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLDSFCR*FTSVVQ
Trigger: TTGGACGACGGAAGTGAATCACCTGCAAAAAGAATC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCGATTCTTTTTGCAGGTaGTTCACTTCCGTCGTCCAA +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFDSFCR*FTSVVQ
Trigger: TTGGACGACGGAAGTGAATCACCTGCAAAAAGAATC...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTTGTCAAGATGCTGCTaGAAGATGTCTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFLSRCC*KMSLIC
Trigger: GCAGATGAGAGACATCTTGCAGCAGCATCTTGACAA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGTTCTTTTGTGACCTTTaGCATCACATAAATGGCACA +
Preference number: 4 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLFFCDL*HHINGT
Trigger: TGTGCCATTTATGTGATGGCAAAGGTCACAAAAGAA...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCTTCTTTTGTGACCTTTaGCATCACATAAATGGCACA +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGFFCDL*HHINGT
Trigger: TGTGCCATTTATGTGATGGCAAAGGTCACAAAAGAA...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTAGTAGTGCTGACTGTTaGGGAGCTGTACCTGTCATA +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTSSADC*GAVPVI
Trigger: TATGACAGGTACAGCTCCCCAACAGTCAGCACTACT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCATAAGTTCGGTGCACTaGATTATAGAGAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAISSVH*IIENSK
Trigger: CTTTGAATTCTCTATAATCCAGTGCACCGAACTTAT...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCAGCAGAGTGATTCTCTaGGCAGATTCTTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFSRVIL*ADSFCR
Trigger: CCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCT...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTCCGTATCATACTGTTaGTTTCCCTCAGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFSVSYC*FPSVSL
Trigger: CAAAGAGACTGAGGGAAATCAACAGTATGATACGGA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTATTAGACTTGTCAAGATaGTGCTGCAAGATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLLDLSR*CCKMSL
Trigger: GAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAA...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCAACAGCGAAGGATTCTaGTTAAAGATACATAGTTTC +
Preference number: 4 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGNSEGF*LKIHSF
Trigger: GAAACTATGTATCTTTAACCAGAATCCTTCGCTGTT...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTCCCTCCATTTTCGTTaGCAATACCTTGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTSLHFR*QYLGLE
Trigger: TTCCAGTCCAAGGTATTGCCAACGAAAATGGAGGGA...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTATTGCCATCACATAAATaGCACACATCAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLLPSHK*HTSTAG
Trigger: ACCAGCTGTTGATGTGTGCCATTTATGTGATGGCAA...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTAGCAGAGTGATTCTCTaGGCAGATTCTTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTSRVIL*ADSFCR
Trigger: CCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCACCTGTCTTCTTTTGTaGCCTTTGCCATCACATAAA +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFTCLLL*PLPSHK
Trigger: TTTATGTGATGGCAAAGGTCACAAAAGAAGACAGGT...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTGGAACAGATTTTCTaGAAGCCACATATAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYLEQIF*KPHIRH
Trigger: GTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAA...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAAACAGCGAAGGATTCTaGTTAAAGATACATAGTTTC +
Preference number: 4 (lower is better)
Translates to: TANPGSQCYASYSHKVPPNSEGF*LKIHSF
Trigger: GAAACTATGTATCTTTAACCAGAATCCTTCGCTGTT...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR TCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTCTGGCTGGAAATGCTaGGAATATATTTCGTACATT +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFSGWKC*EYISYI
Trigger: AATGTACGAAATATATTCTCAGCATTTCCAGCCAGA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTGTGCAGACTCTAAGTaGTTTAGACTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTCADSK*FRLVKM
Trigger: CATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACA...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTTCTTTTGTGACCTTTaGCATCACATAAATGGCACA +
Preference number: 4 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFFFCDL*HHINGT
Trigger: TGTGCCATTTATGTGATGGCAAAGGTCACAAAAGAA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CCA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACAGCACCCAGCAAAAATaGAAAATTTCTGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYSTQQK*KISDVV
Trigger: TACCACATCAGAAATTTTCCATTTTTGCTGGGTGCT...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR GCA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTACACGTATTCTTCATATaGCTTATTAACGGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLHVFFI*LINGLK
Trigger: TTTAAGGCCGTTAATAAGGCATATGAAGAATACGTG...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp TGCGGTAGCTGCTCCAGGCCTCGGCGCGCGCCGCCTCGTCCATGTTaGGGCGGCTGCACAGCTCCTCGAACCGCTGCTGGATCTGATGGC +
Preference number: 5 (lower is better)
Translates to: CGSCSRPRRAPPRPC*GGCTAPRTAAGSDG
Trigger: GCCATCAGATCCAGCAGCGGTTCGAGGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGGCGCGCGCCGAGGCCTGGAGCAGCTACCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp GCGATCCGCGGCGTCGCCATCCTCCTCCTCTTCCTCCGAGCTGGCTaGAGCAGCTGGAGGAGGCGGTGGCGACTGGTTGCCTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: AIRGVAILLLFLRAG*SSWRRRWRLVASRC
Trigger: GCATCTGGAGGCAACCAGTCGCCACCGCCTCCTCCAGCTGCTGCAGCCAGCTCGGAGGAAGAGGAGGAGGATGGCGACGCCGCGGATCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp ACCAATGAAGGTCATTTCCCTCCAGCGTGTAGCTCTCGCTCATGCTaGGGTAGCTGCTCCAGGCCTCGGCGCGCGCCGCCTCGTCCATGT +
Preference number: 5 (lower is better)
Translates to: TNEGHFPPACSSRSC*GSCSRPRRAPPRPC
Trigger: ACATGGACGAGGCGGCGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACACGCTGGAGGGAAATGACCTTCATTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp CTAACCAATGAAGGTCATTTCCCTCCAGCGTGTAGCTCTCGCTCATaGTGCGGTAGCTGCTCCAGGCCTCGGCGCGCGCCGCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: LTNEGHFPPACSSRS*CGSCSRPRRAPPRP
Trigger: TGGACGAGGCGGCGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACACGCTGGAGGGAAATGACCTTCATTGGTTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAGCCGCCTCGTCCATGTaGAGGCGGCTGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGAASSM*RRLHSS
Trigger: GGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGGC...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGGCCGCCTCGTCCATGTaGAGGCGGCTGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: YPLGDGIPGICCHTESEAAASSM*RRLHSS
Trigger: GGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGGC...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTCACCGGACCAGGGACTaGCAAAGTGGTTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSHRTRD*QSGSCH
Trigger: GTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTG...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTGCCTGGGTTCTGCTGTaGTCCACCAGGGGAAATCTG +
Preference number: 5 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSAWVLL*STRGNL
Trigger: CAGATTTCCCCTGGTGGACAACAGCAGAACCCAGGC...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp TCCAGCTTCTCACTGGGTGCATTCCTGAGGCCGGACAGCATGGTGTaGAGACGGCTCAGGCTGTGTGCAGCTGTGGAGACGGGAGTCACA +
Preference number: 5 (lower is better)
Translates to: SSFSLGAFLRPDSMV*RRLRLCAAVETGVT
Trigger: TGTGACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGTCTTCACACCATGCTGTCCGGCCTCAGGAATGCACCCAGTGAGAAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp ATTCCTGAGGCCGGACAGCATGGTGTGAAGACGGCTCAGGCTGTGTaGAGCTGTGGAGACGGGAGTCACACACGGGCTGTTCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: IPEAGQHGVKTAQAV*SCGDGSHTRAVLLN
Trigger: GTTCAGGAGAACAGCCCGTGTGTGACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGTCTTCACACCATGCTGTCCGGCCTCAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp GGCCGGACAGCATGGTGTGAAGACGGCTCAGGCTGTGTGCAGCTGTaGAGACGGGAGTCACACACGGGCTGTTCTCCTGAACATACCTCA +
Preference number: 5 (lower is better)
Translates to: GRTAWCEDGSGCVQL*RRESHTGCSPEHTS
Trigger: TGAGGTATGTTCAGGAGAACAGCCCGTGTGTGACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGTCTTCACACCATGCTGTCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCCTTCAGCGGTCCCTTaGCTCACAGTTGGAACAGAT +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCPSAVP*LTVGTD
Trigger: ATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAGG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp TCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCACTGTTTGTCCATaGTTGGCCGTGACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SGALGQGLDTSRSGPAPLVTVCP*LAVTVA
Trigger: AGCCACTGTCACGGCCAACAATGGACAAACAGTGAC...AAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCTCGAGGAGAAGGCATaGCTTCGTTGTTATGTGGGG +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCLEEKA*LRCYVG
Trigger: CCCCACATAACAACGAAGCAATGCCTTCTCCTCGAG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp AGTGGCTGGCCTGGGTTCTGCTGTTGTCCACCAGGGGAAATCTGTTaGATGGCCACCGGACCAGGGACTTGCAAAGTGGTTCCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SGWPGFCCCPPGEIC*MATGPGTCKVVPVT
Trigger: GGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGTGGACAACAGCAGAACCCAGGCCAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ATCAGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTCTGTTTTCTTCCTCTTaGCTGGCGAGGCTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: IRSFRPRPGHFQVGASPSLFSSS*LARLFF
Trigger: GAAGAACAGCCTCGCCAGCAAAGAGGAAGAAAACAG...AGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTACTGTTTGTCCATTGTaGGCCGTGACAGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCTVCPL*AVTVAV
Trigger: AACAGCCACTGTCACGGCCAACAATGGACAAACAGT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp CTGTGTGCAGCTGTGGAGACGGGAGTCACACACGGGCTGTTCTCCTaGACATACCTCACGCCAGTCAGTGGTGTGCAGACTCTAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LCAAVETGVTHGLFS*TYLTPVSGVQTLSA
Trigger: AGCACTTAGAGTCTGCACACCACTGACTGGCGTGAGGTATGTTCAGGAGAACAGCCCGTGTGTGACTCCCGTCTCCACAGCTGCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp GCTGGCCTGGGTTCTGCTGTTGTCCACCAGGGGAAATCTGTTGAATaGCCACCGGACCAGGGACTTGCAAAGTGGTTCCTGTCACCTGTT +
Preference number: 5 (lower is better)
Translates to: AGLGSAVVHQGKSVE*PPDQGLAKWFLSPV
Trigger: AACAGGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGTGGACAACAGCAGAACCCAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGAGTCACTGTTTGTCCATaGTTGGCCGTGACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGVTVCP*LAVTVA
Trigger: AGCCACTGTCACGGCCAACAATGGACAAACAGTGAC...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTATCCCTCCATTTTCGTaGGCAATACCTTGGACTGGA +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCIPPFS*AIPWTG
Trigger: TCCAGTCCAAGGTATTGCCAACGAAAATGGAGGGAT...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGGCCTGGGTTCTGCTGTaGTCCACCAGGGGAAATCTG +
Preference number: 5 (lower is better)
Translates to: YPLGDGIPGICCHTESEAAWVLL*STRGNL
Trigger: CAGATTTCCCCTGGTGGACAACAGCAGAACCCAGGC...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCTGGGCAGATTCTTTTaGCAGGTGATTCACTTCCGT +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCLGRFF*QVIHFR
Trigger: ACGGAAGTGAATCACCTGCAAAAAGAATCTGCCCAG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTCTAAGTGCTTTAGACTaGTCAAGATGCTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCLSALD*SRCCCK
Trigger: CTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAG...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGATGGAATGGTCACTGTTaGTCCATTGTTGGCCGTGAC +
Preference number: 5 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGWNGHC*SIVGRD
Trigger: GTCACGGCCAACAATGGACAAACAGTGACCATTCCA...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp TCAATGACACACGGCGGGTCGGAGGACGCTTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCTTTCGCATATATAAAAAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: SMTHGGSEDALESLG*QSSDRPFAYIKSTQ
Trigger: CTGGGTGCTTTTTATATATGCGAAAGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAAAGCGTCCTCCGACCCGCCGTGTGTCATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211136.2
CDS CCA 90 bp CAGGGGAAATCTGTTGAATGGCCACCGGACCAGGGACTTGCAAAGTaGTTCCTGTCACCTGTTGGGAACTCAGACTTCCAGCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: QGKSVEWPPDQGLAK*FLSPVGNSDFQPVL
Trigger: AAGCACTGGCTGGAAGTCTGAGTTCCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACGCCGCCTCGTCCATGTaGAGGCGGCTGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYAASSM*RRLHSS
Trigger: GGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGGC...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGATTCGTTGGCAATACCTaGGACTGGAATGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGFVGNT*DWNGHC
Trigger: ACAGTGACCATTCCAGTCCAAGGTATTGCCAACGAA...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCCACCGGACCAGGGACTaGCAAAGTGGTTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAHRTRD*QSGSCH
Trigger: GTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTG...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGAGCTTTAGGCCAAGGCCTGGACACTTCCAGGTCGGGGCCAGCCCCTCTTGTGTCCGTATCATACTGTaGATTTCCCTCAGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: RSFRPRPGHFQVGASPSCVRIIL*ISLSLF
Trigger: AAAGAGACTGAGGGAAATCAACAGTATGATACGGAC...ACAAGAGGGGCTGGCCCCGACCTGGAAGTGTCCAGGCCTTGGCCTAAAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp TGGGAAAAAGCGACCACCTCAAGGCAGCAGGCCAAGAGTGACCTGTaGAATGCGTCATGCTCCAGAACACCAGATAAATCCATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: WEKATTSRQQAKSDL*NASCSRTPDKSMSP
Trigger: GGGAGACATGGATTTATCTGGTGTTCTGGAGCATGACGCATTCCACAGGTCACTCTTGGCCTGCTGCCTTGAGGTGGTCGCTTTTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGCACCGGACCAGGGACTaGCAAAGTGGTTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLHRTRD*QSGSCH
Trigger: GTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTG...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCACCAGGGGAAATCTGTaGAATGGCCACCGGACCAGG +
Preference number: 5 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGTRGNL*NGHRTR
Trigger: CCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGT...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGACCAGGGGAAATCTGTaGAATGGCCACCGGACCAGG +
Preference number: 5 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLTRGNL*NGHRTR
Trigger: CCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGT...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp TCAATGACACACGGCGGGTCGGAGGACGCTTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCTTTAAAATTAGGGTTCACAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SMTHGGSEDALESLG*QSSDRPLKLGFTSS
Trigger: AGAACTTGTGAACCCTAATTTTAAAGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAAAGCGTCCTCCGACCCGCCGTGTGTCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
CDS TCA 90 bp CCTCGGTCATTCGCCACATCCTGGAGACGACGTAACAGAGCAGAGTaGTTCTCTGGGCAGATTCTTTTTGCAGGTGATTCACTTCCGTCG +
Preference number: 5 (lower is better)
Translates to: PRSFATSWRRRNRAE*FSGQILFAGDSLPS
Trigger: CGACGGAAGTGAATCACCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCTCTGTTACGTCGTCTCCAGGATGTGGCGAATGACCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp TGGAATGGTCACTGTTTGTCCATTGTTGGCCGTGACAGTGGCTGTTaGCATGGTGACCAAGGTCTGTCCAGGAACTGGTGTGACAGAAAC +
Preference number: 5 (lower is better)
Translates to: WNGHCLSIVGRDSGC*HGDQGLSRNWCDRN
Trigger: GTTTCTGTCACACCAGTTCCTGGACAGACCTTGGTCACCATGGCAACAGCCACTGTCACGGCCAACAATGGACAAACAGTGACCATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTGTTCCTTTATCCCCTaGGCCTCCAACACTAGACCG +
Preference number: 5 (lower is better)
Translates to: GLHVVQVALRHAVLLRLACSFIP*ASNTRP
Trigger: CGGTCTAGTGTTGGAGGCCAAGGGGATAAAGGAACA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGGAAGGGAGAGTGAGTGCTCAAGGGATCAGGAGCTTTAGGCCAAGGCCTGGACTGTATTTAGTTCGGTaGGAGAATTCTGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: GEGRVSAQGIRSFRPRPGLYLVR*ENSDGF
Trigger: GAAGCCATCAGAATTCTCCAACCGAACTAAATACAG...TCCAGGCCTTGGCCTAAAGCTCCTGATCCCTTGAGCACTCACTCTCCCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp TTCTTTCAATCTGTCAGCGATAGCCTGAGTTGGATCTCGGGAACATaGCCTGAGTATCCGCTCCAGCTTCTCACTGGGTGCATTCCTGAG +
Preference number: 5 (lower is better)
Translates to: FFQSVSDSLSWISGT*PEYPLQLLTGCIPE
Trigger: CTCAGGAATGCACCCAGTGAGAAGCTGGAGCGGATACTCAGGTCATGTTCCCGAGATCCAACTCAGGCTATCGCTGACAGATTGAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp TACAAATGGATAGGGAGAGAGGGGAGGAGTGTCCGTCTGCGCGTTTaGCTGCGAGTACTTCATGGCAAACGCTTGGATTTGCTTCCTATA +
Preference number: 5 (lower is better)
Translates to: YKWIGREGRSVRLRV*LRVLHGKRLDLLPI
Trigger: TATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTCCTCCCCTCTCTCCCTATCCATTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp AGTCACACACGGGCTGTTCTCCTGAACATACCTCACGCCAGTCAGTaGTGTGCAGACTCTAAGTGCTTTAGACTTGTCAAGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHTRAVLLNIPHASQ*CADSKCFRLVKMLL
Trigger: CAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGGCGTGAGGTATGTTCAGGAGAACAGCCCGTGTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp CCAGTCAGTGGTGTGCAGACTCTAAGTGCTTTAGACTTGTCAAGATaGTGCTGCAAGATGTCTCTCATCTGCGTCCGTTCAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: PVSGVQTLSALDLSR*CCKMSLICVRSALS
Trigger: AGAGAGTGCTGAACGGACGCAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp TGGGCTGTGGAACTGGTAGGGTGCTGTTTGACCTCATCACTGGGCTaGAATCTCTACTGGCTCTGTCTGTATTTAGTTCGGTTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: WAVELVGCCLTSSLG*NLYWLCLYLVRLEN
Trigger: ATTCTCCAACCGAACTAAATACAGACAGAGCCAGTAGAGATTCCAGCCCAGTGATGAGGTCAAACAGCACCCTACCAGTTCCACAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp AGAGGGGAGGAGTGTCCGTCTGCGCGTTTGCCTGCGAGTACTTCATaGCAAACGCTTGGATTTGCTTCCTATAGATGTTGTTGTAGAACT +
Preference number: 5 (lower is better)
Translates to: RGEECPSARLPASTS*QTLGFASYRCCCRT
Trigger: AGTTCTACAACAACATCTATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGGCGAGGCTGTTCTTCTaGGGGATATTTAAAAATGTC +
Preference number: 5 (lower is better)
Translates to: YPLGDGIPGICCHTESEAARLFF*GIFKNV
Trigger: GACATTTTTAAATATCCCCAAGAAGAACAGCCTCGC...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGCTGTTTTCTTCCTCTTaGCTGGCGAGGCTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLLFSSS*LARLFF
Trigger: GAAGAACAGCCTCGCCAGCAAAGAGGAAGAAAACAG...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTTAAACTCCTGACTGTTTGTCCATTGTaGGCCGTGACAGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SPSCPQTCCIAQVGLKLLTVCPL*AVTVAV
Trigger: AACAGCCACTGTCACGGCCAACAATGGACAAACAGT...CAGGAGTTTAAGGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACACCAGGGGAAATCTGTaGAATGGCCACCGGACCAGG +
Preference number: 5 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYTRGNL*NGHRTR
Trigger: CCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGT...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp TACCCCTTGGGTGATGGGATACCAGGCATTTGCTGCCACACTGAGTCAGAAGCGCTGTATTTAGTTCGGTaGGAGAATTCTGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: YPLGDGIPGICCHTESEALYLVR*ENSDGF
Trigger: GAAGCCATCAGAATTCTCCAACCGAACTAAATACAG...CGCTTCTGACTCAGTGTGGCAGCAAATGCCTGGTATCCCATCACCCAAGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACTCGAGGAGAAGGCATaGCTTCGTTGTTATGTGGGG +
Preference number: 5 (lower is better)
Translates to: TANPGSQCYASYSHKVPPLEEKA*LRCYVG
Trigger: CCCCACATAACAACGAAGCAATGCCTTCTCCTCGAG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 90 bp CAAACGCTTGGATTTGCTTCCTATAGATGTTGTTGTAGAACTGAATaGGGTCTCCTCGTTCCTCCTCTTCAACGTCACTGCTGGCACCCG +
Preference number: 5 (lower is better)
Translates to: QTLGFASYRCCCRTE*GLLVPPLQRHCWHP
Trigger: CGGGTGCCAGCAGTGACGTTGAAGAGGAGGAACGAGGAGACCTCATTCAGTTCTACAACAACATCTATAGGAAGCAAATCCAAGCGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp AGTGGTGTGCAGACTCTAAGTGCTTTAGACTTGTCAAGATGCTGCTaGAAGATGTCTCTCATCTGCGTCCGTTCAGCACTCTCTGTACCT +
Preference number: 5 (lower is better)
Translates to: SGVQTLSALDLSRCC*KMSLICVRSALSVP
Trigger: AGGTACAGAGAGTGCTGAACGGACGCAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp GTCAGTGGTGTGCAGACTCTAAGTGCTTTAGACTTGTCAAGATGCTaGTGCAAGATGTCTCTCATCTGCGTCCGTTCAGCACTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VSGVQTLSALDLSRC*CKMSLICVRSALSV
Trigger: TACAGAGAGTGCTGAACGGACGCAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp CTCCTGAACATACCTCACGCCAGTCAGTGGTGTGCAGACTCTAAGTaGTTTAGACTTGTCAAGATGCTGCTGCAAGATGTCTCTCATCTG +
Preference number: 5 (lower is better)
Translates to: LLNIPHASQWCADSK*FRLVKMLLQDVSHL
Trigger: CAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGGCGTGAGGTATGTTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 90 bp CTGGTAGGGTGCTGTTTGACCTCATCACTGGGCTGGAATCTCTACTaGCTCTGTCTGTATTTAGTTCGGTTGGAGAATTCTGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: LVGCCLTSSLGWNLY*LCLYLVRLENSDGF
Trigger: GAAGCCATCAGAATTCTCCAACCGAACTAAATACAGACAGAGCCAGTAGAGATTCCAGCCCAGTGATGAGGTCAAACAGCACCCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTCCCTTTGCTCACAGTaGGAACAGATTTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GLHVVQVALRHAVLLRLASLCSQ*EQIFCK
Trigger: CTTGCAGAAAATCTGTTCCAACTGTGAGCAAAGGGA...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAAATGTGGGGGCAGATTaGCCATGTCTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: TANPGSQCYASYSHKVPPNVGAD*PCLPTS
Trigger: AGAAGTGGGAAGACATGGCAAATCTGCCCCCACATT...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTGCCTGGGTTCTGCTGTaGTCCACCAGGGGAAATCTG +
Preference number: 5 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTAWVLL*STRGNL
Trigger: CAGATTTCCCCTGGTGGACAACAGCAGAACCCAGGC...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCGCGAGGCTGTTCTTCTaGGGGATATTTAAAAATGTC +
Preference number: 5 (lower is better)
Translates to: GLHVVQVALRHAVLLRLAARLFF*GIFKNV
Trigger: GACATTTTTAAATATCCCCAAGAAGAACAGCCTCGC...GGCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTATGTTCCTTTATCCCCTaGGCCTCCAACACTAGACCG +
Preference number: 5 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLCSFIP*ASNTRP
Trigger: CGGTCTAGTGTTGGAGGCCAAGGGGATAAAGGAACA...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGTCACTGTTTGTCCATaGTTGGCCGTGACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLVTVCP*LAVTVA
Trigger: AGCCACTGTCACGGCCAACAATGGACAAACAGTGAC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCACTGGGCAGATTCTTTTaGCAGGTGATTCACTTCCGT +
Preference number: 5 (lower is better)
Translates to: TANPGSQCYASYSHKVPPLGRFF*QVIHFR
Trigger: ACGGAAGTGAATCACCTGCAAAAAGAATCTGCCCAG...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACAATGTGGGGGCAGATTaGCCATGTCTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYNVGAD*PCLPTS
Trigger: AGAAGTGGGAAGACATGGCAAATCTGCCCCCACATT...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GCCACACTGAGTCAGAAGCGCTTCCCTTTTATCCCCTCCTTTAATCAGTTGCTGGCGAGGCTGTTCTTCTaGGGGATATTTAAAAATGTC +
Preference number: 5 (lower is better)
Translates to: ATLSQKRFPFIPSFNQLLARLFF*GIFKNV
Trigger: GACATTTTTAAATATCCCCAAGAAGAACAGCCTCGC...CAGCAACTGATTAAAGGAGGGGATAAAAGGGAAGCGCTTCTGACTCAGTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTGTTCCTTTATCCCCTaGGCCTCCAACACTAGACCG +
Preference number: 5 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTCSFIP*ASNTRP
Trigger: CGGTCTAGTGTTGGAGGCCAAGGGGATAAAGGAACA...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACACTGTTTGTCCATTGTaGGCCGTGACAGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYTVCPL*AVTVAV
Trigger: AACAGCCACTGTCACGGCCAACAATGGACAAACAGT...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTATGGAATGGTCACTGTTaGTCCATTGTTGGCCGTGAC +
Preference number: 5 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLWNGHC*SIVGRD
Trigger: GTCACGGCCAACAATGGACAAACAGTGACCATTCCA...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AGGGTTACATGTAGTCCAAGTTGCCCTCAGACATGCTGTATTGCTCAGGTTGGCCTGTATTTAGTTCGGTaGGAGAATTCTGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: RVTCSPSCPQTCCIAQVGLYLVR*ENSDGF
Trigger: GAAGCCATCAGAATTCTCCAACCGAACTAAATACAG...GCCAACCTGAGCAATACAGCATGTCTGAGGGCAACTTGGACTACATGTAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTCTCGAGGAGAAGGCATaGCTTCGTTGTTATGTGGGG +
Preference number: 5 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTLEEKA*LRCYVG
Trigger: CCCCACATAACAACGAAGCAATGCCTTCTCCTCGAG...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTAATGTGGGGGCAGATTaGCCATGTCTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTNVGAD*PCLPTS
Trigger: AGAAGTGGGAAGACATGGCAAATCTGCCCCCACATT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTTGGAATGGTCACTGTTaGTCCATTGTTGGCCGTGAC +
Preference number: 5 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTWNGHC*SIVGRD
Trigger: GTCACGGCCAACAATGGACAAACAGTGACCATTCCA...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp GGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAATTACACAGGTTCTTCGTTGGCAATACCTaGGACTGGAATGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: GHNAMHLTAIKCHQLHRFFVGNT*DWNGHC
Trigger: ACAGTGACCATTCCAGTCCAAGGTATTGCCAACGAA...GAACCTGTGTAATTGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp ACAGCAAACCCTGGGTCACAATGCTATGCATCTTACAGCCATAAAGTGCCACCAGTCCGTATCATACTGTaGATTTCCCTCAGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TANPGSQCYASYSHKVPPVRIIL*ISLSLF
Trigger: AAAGAGACTGAGGGAAATCAACAGTATGATACGGAC...TGGTGGCACTTTATGGCTGTAAGATGCATAGCATTGTGACCCAGGGTTTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp AGTTTCCTTCAGCGGTCCCTTTGCTCACAGTTGGAACAGATTTTCTaGAAGCCACATATAAGGCACATGCTAACCAATGAAGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: SFLQRSLCSQLEQIF*KPHIRHMLTNEGHF
Trigger: GAAATGACCTTCATTGGTTAGCATGTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CAATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACCTAAGTGCTTTAGACTaGTCAAGATGCTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: QLHRFLQTLHAFTLYSTYLSALD*SRCCCK
Trigger: CTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAG...GTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTACTAAGTGCTTTAGACTaGTCAAGATGCTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLLSALD*SRCCCK
Trigger: CTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAG...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp AATTACACAGGTTCCTTCAGACATTGCACGCTTTCACACTGTACAGTACCTACTATCCCTCCATTTTCGTaGGCAATACCTTGGACTGGA +
Preference number: 5 (lower is better)
Translates to: NYTGSFRHCTLSHCTVPTIPPFS*AIPWTG
Trigger: TCCAGTCCAAGGTATTGCCAACGAAAATGGAGGGAT...AGTAGGTACTGTACAGTGTGAAAGCGTGCAATGTCTGAAGGAACCTGTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 90 bp GAAGGATTCTGGTTAAAGATACATAGTTTCCTTCAGCGGTCCCTTTaGTCACAGTTGGAACAGATTTTCTGCAAGCCACATATAAGGCAC +
Preference number: 5 (lower is better)
Translates to: EGFWLKIHSFLQRSL*SQLEQIFCKPHIRH
Trigger: GTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAGGAAACTATGTATCTTTAACCAGAATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS-3UTR CAA 90 bp CCATATGCAAGTGGAAATGAAGTTAAATACAGTTCCTCTCCTGGGGCCTACCTAGTCCGTATCATACTGTaGATTTCCCTCAGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PYASGNEVKYSSSPGAYLVRIIL*ISLSLF
Trigger: AAAGAGACTGAGGGAAATCAACAGTATGATACGGAC...TAGGTAGGCCCCAGGAGAGGAACTGTATTTAACTTCATTTCCACTTGCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp CTGCTCCAGGCCTCGGCGCGCGCCGCCTCGTCCATGTaGAGGCGGCTGCACAGCTCCTCGAACCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLQASARAASSM*RRLHSSSNRCW
Trigger: CCAGCAGCGGTTCGAGGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGGCGCGCGCCGAGGCCTGGAGCAG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp TGCTCCAGGCCTCGGCGCGCGCCGCCTCGTCCATGTTaGGGCGGCTGCACAGCTCCTCGAACCGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: CSRPRRAPPRPC*GGCTAPRTAAG
Trigger: TCCAGCAGCGGTTCGAGGAGCTGTGCAGCCGCCTCAACATGGACGAGGCGGCGCGCGCCGAGGCCTGGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp CCTCCAGCGTGTAGCTCTCGCTCATGCTGCGGTAGCTaGTCCAGGCCTCGGCGCGCGCCGCCTCGTCCATGT +
Preference number: 6 (lower is better)
Translates to: PPACSSRSCCGS*SRPRRAPPRPC
Trigger: ACATGGACGAGGCGGCGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACACGCTGGAGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp GGTCATTTCCCTCCAGCGTGTAGCTCTCGCTCATGCTaGGGTAGCTGCTCCAGGCCTCGGCGCGCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: GHFPPACSSRSC*GSCSRPRRAPP
Trigger: AGGCGGCGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACACGCTGGAGGGAAATGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp GAAGGTCATTTCCCTCCAGCGTGTAGCTCTCGCTCATaGTGCGGTAGCTGCTCCAGGCCTCGGCGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: EGHFPPACSSRS*CGSCSRPRRAP
Trigger: CGGCGCGCGCCGAGGCCTGGAGCAGCTACCGCAGCATGAGCGAGAGCTACACGCTGGAGGGAAATGACCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp GCCGGACAGCATGGTGTGAAGACGGCTCAGGCTGTGTaGAGCTGTGGAGACGGGAGTCACACACGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: AGQHGVKTAQAV*SCGDGSHTRAV
Trigger: AACAGCCCGTGTGTGACTCCCGTCTCCACAGCTGCACACAGCCTGAGCCGTCTTCACACCATGCTGTCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp CTGAGGGGCTGGATAGAGCCAGCGACAGCCTGGGCCTaGCCCCCAACGTTGACTTGGACTGGGAAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: LRGWIEPATAWA*PPTLTWTGKKV
Trigger: AACCTTCTTCCCAGTCCAAGTCAACGTTGGGGGCCAGGCCCAGGCTGTCGCTGGCTCTATCCAGCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp CTCTTCAACGTCACTGCTGGCACCCGTGAGTCGAGTTaGTGTAGGAGGGGCACTGCTGGGCTGTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: LFNVTAGTRESS*CRRGTAGLWNW
Trigger: CCAGTTCCACAGCCCAGCAGTGCCCCTCCTACACCAACTCGACTCACGGGTGCCAGCAGTGACGTTGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp AATGGCCACCGGACCAGGGACTTGCAAAGTGGTTCCTGTCACCTGTaGGGAACTCAGACTTCCAGCCAGTGCTTGAGCACTGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: NGHRTRDLQSGSCHL*GTQTSSQCLSTEGL
Trigger: CAGCCCCTCAGTGCTCAAGCACTGGCTGGAAGTCTGAGTTCCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp GCTGTGGAGACGGGAGTCACACACGGGCTGTTCTCCTaGACATACCTCACGCCAGTCAGTGGTGTGCAGACT +
Preference number: 6 (lower is better)
Translates to: AVETGVTHGLFS*TYLTPVSGVQT
Trigger: AGTCTGCACACCACTGACTGGCGTGAGGTATGTTCAGGAGAACAGCCCGTGTGTGACTCCCGTCTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp CACGGCGGGTCGGAGGACGCTTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCTTTAAAATTAGGGTTC +
Preference number: 6 (lower is better)
Translates to: HGGSEDALESLG*QSSDRPLKLGF
Trigger: GAACCCTAATTTTAAAGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAAAGCGTCCTCCGACCCGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
CDS GCA 72 bp GGAGAGAGGGGAGGAGTGTCCGTCTGCGCGTTTGCCTaGGAGTACTTCATGGCAAACGCTTGGATTTGCTTC +
Preference number: 6 (lower is better)
Translates to: GERGGVSVCAFA*EYFMANAWICF
Trigger: GAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTCCTCCCCTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp ATAGAGCCAGCGACAGCCTGGGCCTGGCCCCCAACGTaGACTTGGACTGGGAAGAAGGTTATCCCTCCATTT +
Preference number: 6 (lower is better)
Translates to: IEPATAWAWPPT*TWTGKKVIPPF
Trigger: AAATGGAGGGATAACCTTCTTCCCAGTCCAAGTCAACGTTGGGGGCCAGGCCCAGGCTGTCGCTGGCTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp GGAAAAAGCGACCACCTCAAGGCAGCAGGCCAAGAGTaGCCTGTGGAATGCGTCATGCTCCAGAACACCAGA +
Preference number: 6 (lower is better)
Translates to: GKSDHLKAAGQE*PVECVMLQNTR
Trigger: TCTGGTGTTCTGGAGCATGACGCATTCCACAGGTCACTCTTGGCCTGCTGCCTTGAGGTGGTCGCTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp CCTGGGTTCTGCTGTTGTCCACCAGGGGAAATCTGTTaGATGGCCACCGGACCAGGGACTTGCAAAGTGGTT +
Preference number: 6 (lower is better)
Translates to: PGFCCCPPGEIC*MATGPGTCKVV
Trigger: AACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGTGGACAACAGCAGAACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp CACGGCGGGTCGGAGGACGCTTTAGAGTCCTTGGGGTaGCAGTCCTCGGACAGGCCTTTCGCATATATAAAA +
Preference number: 6 (lower is better)
Translates to: HGGSEDALESLG*QSSDRPFAYIK
Trigger: TTTTATATATGCGAAAGGCCTGTCCGAGGACTGTCACCCCAAGGACTCTAAAGCGTCCTCCGACCCGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211136.2
CDS GCA 72 bp ATAGGGAGAGAGGGGAGGAGTGTCCGTCTGCGCGTTTaGCTGCGAGTACTTCATGGCAAACGCTTGGATTTG +
Preference number: 6 (lower is better)
Translates to: IGREGRSVRLRV*LRVLHGKRLDL
Trigger: CAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTCCTCCCCTCTCTCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp GCGACCACCTCAAGGCAGCAGGCCAAGAGTGACCTGTaGAATGCGTCATGCTCCAGAACACCAGATAAATCC +
Preference number: 6 (lower is better)
Translates to: ATTSRQQAKSDL*NASCSRTPDKS
Trigger: GGATTTATCTGGTGTTCTGGAGCATGACGCATTCCACAGGTCACTCTTGGCCTGCTGCCTTGAGGTGGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp GGTTCTGCTGTTGTCCACCAGGGGAAATCTGTTGAATaGCCACCGGACCAGGGACTTGCAAAGTGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: GSAVVHQGKSVE*PPDQGLAKWFL
Trigger: CAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGTGGACAACAGCAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp GATAGGGAGAGAGGGGAGGAGTGTCCGTCTGCGCGTTaGCCTGCGAGTACTTCATGGCAAACGCTTGGATTT +
Preference number: 6 (lower is better)
Translates to: DRERGEECPSAR*PASTSWQTLGF
Trigger: AAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTCCTCCCCTCTCTCCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp TTGTCCACCAGGGGAAATCTGTTGAATGGCCACCGGACCAGGGACTaGCAAAGTGGTTCCTGTCACCTGTTGGGAACTCAGACTTCCAGC +
Preference number: 6 (lower is better)
Translates to: LSTRGNLLNGHRTRD*QSGSCHLLGTQTSS
Trigger: GCTGGAAGTCTGAGTTCCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCTGGTGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp TCTGTTGAATGGCCACCGGACCAGGGACTTGCAAAGTaGTTCCTGTCACCTGTTGGGAACTCAGACTTCCAG +
Preference number: 6 (lower is better)
Translates to: SVEWPPDQGLAK*FLSPVGNSDFQ
Trigger: CTGGAAGTCTGAGTTCCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp AGGGGAAATCTGTTGAATGGCCACCGGACCAGGGACTaGCAAAGTGGTTCCTGTCACCTGTTGGGAACTCAG +
Preference number: 6 (lower is better)
Translates to: RGNLLNGHRTRD*QSGSCHLLGTQ
Trigger: CTGAGTTCCCAACAGGTGACAGGAACCACTTTGCAAGTCCCTGGTCCGGTGGCCATTCAACAGATTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp CCCTCCATTTTCGTTGGCAATACCTTGGACTGGAATGGTCACTGTTaGTCCATTGTTGGCCGTGACAGTGGCTGTTGCCATGGTGACCAA +
Preference number: 6 (lower is better)
Translates to: PSIFVGNTLDWNGHC*SIVGRDSGCCHGDQ
Trigger: TTGGTCACCATGGCAACAGCCACTGTCACGGCCAACAATGGACAAACAGTGACCATTCCAGTCCAAGGTATTGCCAACGAAAATGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp TTACAAATGGATAGGGAGAGAGGGGAGGAGTGTCCGTCTGCGCGTTaGCCTGCGAGTACTTCATGGCAAACGCTTGGATTTGCTTCCTAT +
Preference number: 6 (lower is better)
Translates to: LQMDRERGEECPSAR*PASTSWQTLGFASY
Trigger: ATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTCCTCCCCTCTCTCCCTATCCATTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp CGGGCTGTTCTCCTGAACATACCTCACGCCAGTCAGTaGTGTGCAGACTCTAAGTGCTTTAGACTTGTCAAG +
Preference number: 6 (lower is better)
Translates to: RAVLLNIPHASQ*CADSKCFRLVK
Trigger: CTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGGCGTGAGGTATGTTCAGGAGAACAGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp TACCTCACGCCAGTCAGTGGTGTGCAGACTCTAAGTGCTTTAGACTaGTCAAGATGCTGCTGCAAGATGTCTCTCATCTGCGTCCGTTCA +
Preference number: 6 (lower is better)
Translates to: YLTPVSGVQTLSALD*SRCCCKMSLICVRS
Trigger: TGAACGGACGCAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGGCGTGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp TATCAAGACACTTCTGTACACCTGGCTCCGGGCCTGTaGCTGAGTTCTGTAACAACGCATGATGTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: YQDTSVHLAPGL*LSSVTTHDVLE
Trigger: TTCCAGAACATCATGCGTTGTTACAGAACTCAGCCACAGGCCCGGAGCCAGGTGTACAGAAGTGTCTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp GAACTGGTAGGGTGCTGTTTGACCTCATCACTGGGCTaGAATCTCTACTGGCTCTGTCTGTATTTAGTTCGG +
Preference number: 6 (lower is better)
Translates to: ELVGCCLTSSLG*NLYWLCLYLVR
Trigger: CCGAACTAAATACAGACAGAGCCAGTAGAGATTCCAGCCCAGTGATGAGGTCAAACAGCACCCTACCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp GAGTGTCCGTCTGCGCGTTTGCCTGCGAGTACTTCATaGCAAACGCTTGGATTTGCTTCCTATAGATGTTGT +
Preference number: 6 (lower is better)
Translates to: ECPSARLPASTS*QTLGFASYRCC
Trigger: ACAACATCTATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp TCACTGGGCTGGAATCTCTACTGGCTCTGTCTGTATTTAGTTCGGTaGGAGAATTCTGATGGCTTCTGCTCTCACTGCTGCCAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: SLGWNLYWLCLYLVR*ENSDGFCSHCCQSF
Trigger: GAAACTCTGGCAGCAGTGAGAGCAGAAGCCATCAGAATTCTCCAACCGAACTAAATACAGACAGAGCCAGTAGAGATTCCAGCCCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp CGTCTGCGCGTTTGCCTGCGAGTACTTCATGGCAAACGCTTGGATTaGCTTCCTATAGATGTTGTTGTAGAACTGAATGAGGTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: RLRVCLRVLHGKRLD*LPIDVVVELNEVSS
Trigger: CGAGGAGACCTCATTCAGTTCTACAACAACATCTATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp TTCGCCACATCCTGGAGACGACGTAACAGAGCAGAGTaGTTCTCTGGGCAGATTCTTTTTGCAGGTGATTCA +
Preference number: 6 (lower is better)
Translates to: FATSWRRRNRAE*FSGQILFAGDS
Trigger: TGAATCACCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCTCTGTTACGTCGTCTCCAGGATGTGGCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp GTGGTACAGGGCTGTCGCCTCTGTTTTCTTCCTCTTTaGTGGCGAGGCTGTTCTTCTTGGGGATATTTAAAA +
Preference number: 6 (lower is better)
Translates to: VVQGCRLCFLPL*WRGCSSWGYLK
Trigger: TTTTAAATATCCCCAAGAAGAACAGCCTCGCCAGCAAAGAGGAAGAAAACAGAGGCGACAGCCCTGTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp GGTGTGCAGACTCTAAGTGCTTTAGACTTGTCAAGATaGTGCTGCAAGATGTCTCTCATCTGCGTCCGTTCA +
Preference number: 6 (lower is better)
Translates to: GVQTLSALDLSR*CCKMSLICVRS
Trigger: TGAACGGACGCAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp ATACCTCACGCCAGTCAGTGGTGTGCAGACTCTAAGTaGTTTAGACTTGTCAAGATGCTGCTGCAAGATGTC +
Preference number: 6 (lower is better)
Translates to: IPHASQWCADSK*FRLVKMLLQDV
Trigger: GACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGGCGTGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp GACTGTTGGGGAGCTGTACCTGTCATACAATGTGGTTaGAGACGTTATACTTCTTCCAAGTCCTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: DCWGAVPVIQCG*RRYTSSKSSSI
Trigger: GATGCTGGAGGACTTGGAAGAAGTATAACGTCTCCAACCACATTGTATGACAGGTACAGCTCCCCAACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp CCAGTCAGTGGTGTGCAGACTCTAAGTGCTTTAGACTaGTCAAGATGCTGCTGCAAGATGTCTCTCATCTGC +
Preference number: 6 (lower is better)
Translates to: PVSGVQTLSALD*SRCCCKMSLIC
Trigger: GCAGATGAGAGACATCTTGCAGCAGCATCTTGACAAGTCTAAAGCACTTAGAGTCTGCACACCACTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp AGTGTCCGTCTGCGCGTTTGCCTGCGAGTACTTCATGGCAAACGCTaGGATTTGCTTCCTATAGATGTTGTTGTAGAACTGAATGAGGTC +
Preference number: 6 (lower is better)
Translates to: SVRLRVCLRVLHGKR*DLLPIDVVVELNEV
Trigger: GACCTCATTCAGTTCTACAACAACATCTATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAGACGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp GGAGACGACGTAACAGAGCAGAGTGATTCTCTGGGCAGATTCTTTTaGCAGGTGATTCACTTCCGTCGTCCAAGAGAATCCCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: GDDVTEQSDSLGRFF*QVIHFRRPRESLSF
Trigger: AAAAGAGAGGGATTCTCTTGGACGACGGAAGTGAATCACCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCTCTGTTACGTCGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp CCAACGTTGACTTGGACTGGGAAGAAGGTTATCCCTCCATTTTCGTaGGCAATACCTTGGACTGGAATGGTCACTGTTTGTCCATTGTTG +
Preference number: 6 (lower is better)
Translates to: PTLTWTGKKVIPPFS*AIPWTGMVTVCPLL
Trigger: CAACAATGGACAAACAGTGACCATTCCAGTCCAAGGTATTGCCAACGAAAATGGAGGGATAACCTTCTTCCCAGTCCAAGTCAACGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp AGCAGAGTGATTCTCTGGGCAGATTCTTTTTGCAGGTaGTTCACTTCCGTCGTCCAAGAGAATCCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: SRVILWADSFCR*FTSVVQENPSL
Trigger: AAGAGAGGGATTCTCTTGGACGACGGAAGTGAATCACCTGCAAAAAGAATCTGCCCAGAGAATCACTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp CTGCGCGTTTGCCTGCGAGTACTTCATGGCAAACGCTaGGATTTGCTTCCTATAGATGTTGTTGTAGAACTG +
Preference number: 6 (lower is better)
Translates to: LRVCLRVLHGKR*DLLPIDVVVEL
Trigger: CAGTTCTACAACAACATCTATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAACGCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp ATTTCGTACATTTCTTTCAATCTGTCAGCGATAGCCTaGGTTGGATCTCGGGAACATGACCTGAGTATCCGC +
Preference number: 6 (lower is better)
Translates to: ISYISFNLSAIA*VGSREHDLSIR
Trigger: GCGGATACTCAGGTCATGTTCCCGAGATCCAACTCAGGCTATCGCTGACAGATTGAAAGAAATGTACGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS TCA 72 bp GGATTTGCTTCCTATAGATGTTGTTGTAGAACTGAATaGGGTCTCCTCGTTCCTCCTCTTCAACGTCACTGC +
Preference number: 6 (lower is better)
Translates to: GFASYRCCCRTE*GLLVPPLQRHC
Trigger: GCAGTGACGTTGAAGAGGAGGAACGAGGAGACCTCATTCAGTTCTACAACAACATCTATAGGAAGCAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp CAGCGGTCCCTTTGCTCACAGTTGGAACAGATTTTCTaGAAGCCACATATAAGGCACATGCTAACCAATGAA +
Preference number: 6 (lower is better)
Translates to: QRSLCSQLEQIF*KPHIRHMLTNE
Trigger: TTCATTGGTTAGCATGTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAACTGTGAGCAAAGGGACCGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CCA 72 bp ATTCAATTAGGCTCTGCTCCGAACAGCGAAGGATTCTaGTTAAAGATACATAGTTTCCTTCAGCGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: IQLGSAPNSEGF*LKIHSFLQRSL
Trigger: AAGGGACCGCTGAAGGAAACTATGTATCTTTAACCAGAATCCTTCGCTGTTCGGAGCAGAGCCTAATTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 90 bp TGGTTAAAGATACATAGTTTCCTTCAGCGGTCCCTTTGCTCACAGTaGGAACAGATTTTCTGCAAGCCACATATAAGGCACATGCTAACC +
Preference number: 6 (lower is better)
Translates to: WLKIHSFLQRSLCSQ*EQIFCKPHIRHMLT
Trigger: GGTTAGCATGTGCCTTATATGTGGCTTGCAGAAAATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAGGAAACTATGTATCTTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS GCA 72 bp TGGTTAAAGATACATAGTTTCCTTCAGCGGTCCCTTTaGTCACAGTTGGAACAGATTTTCTGCAAGCCACAT +
Preference number: 6 (lower is better)
Translates to: WLKIHSFLQRSL*SQLEQIFCKPH
Trigger: ATGTGGCTTGCAGAAAATCTGTTCCAACTGTGAGCAAAGGGACCGCTGAAGGAAACTATGTATCTTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2
CDS CAA 72 bp GTTTGCCTGCGAGTACTTCATGGCAAACGCTTGGATTaGCTTCCTATAGATGTTGTTGTAGAACTGAATGAG +
Preference number: 6 (lower is better)
Translates to: VCLRVLHGKRLD*LPIDVVVELNE
Trigger: CTCATTCAGTTCTACAACAACATCTATAGGAAGCAAATCCAAGCGTTTGCCATGAAGTACTCGCAGGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034091.8
ENSMUST00000209518.2
ENSMUST00000211136.2