Pregenerated sensors for RBFOX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008658Ensembl transcript IDs: ENSMUST00000056416.9, ENSMUST00000115841.10, ENSMUST00000229741.2, ENSMUST00000230658.2, ENSMUST00000231031.2, ENSMUST00000231088.2, ENSMUST00000231194.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGGGCAGATCTTGTTCTTTGGGGATAACCCTGGGGCACTaGGGAGAGGGAAGGGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: VLLWPCSEKGWGRSCSLGITLGH*GEGRAG Trigger: GCCCGCCCTTCCCTCTCCCCAGTGCCCCAGGGTTAT...CCCCAAAGAACAAGATCTGCCCCATCCTTTTTCGGAGCAGGGCCAGAGCAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGGGCAGATCTTGTTCTTTGGGGTGGATGCAGAAAGAATaGCTTGCCGTTTCCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VLLWPCSEKGWGRSCSLGWMQKE*LAVSSL Trigger: AAGACTGGAAACGGCAAGTCATTCTTTCTGCATCCA...CCCCAAAGAACAAGATCTGCCCCATCCTTTTTCGGAGCAGGGCCAGAGCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGGTGTTTGCTTCCTTCTaGCAATTGTTGGGCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TSCNFSAVLLWPCSEKGWVFASF*QLLGLG Trigger: ACCAAGGCCCAACAATTGTCAGAAGGAAGCAAACAC...CCATCCTTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGGGCAGATCTTGTTCTTTGGGGCCTTCTGACAATTGTTaGGCCTTGGTGATAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: VLLWPCSEKGWGRSCSLGPSDNC*ALVIEI Trigger: TATTTCTATCACCAAGGCCCAACAATTGTCAGAAGG...CCCCAAAGAACAAGATCTGCCCCATCCTTTTTCGGAGCAGGGCCAGAGCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGTAGGTAAGAAGCTGAGTACTGCAGGTGGAATGATAAGAGGGTGGACTGGCTTTGAGTTGCTAACATaGTGTCCTACTGCATGTGAT | + |
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Preference number: 2 (lower is better) Translates to: WVGKKLSTAGGMIRGWTGFELLT*CPTACD Trigger: ATCACATGCAGTAGGACATCATGTTAGCAACTCAAA...GCCAGTCCACCCTCTTATCATTCCACCTGCAGTACTCAGCTTCTTACCTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATCACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAACACAGACTGAAAAATTaGAAGTTGCTCACAGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: KITSCNFSAVLLWPCSEKHRLKN*KLLTAQ Trigger: CTGCGCTGTGAGCAACTTGCAATTTTTCAGTCTGTG...TTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGTGATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR TCA 72 bp | GGCACTGGGGAGAGGGAAGGGCGGGCTCTCACAGACTaGAAAATTGCAAGTTGCTCACAGCGCAGTCATGTT | + |
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Preference number: 3 (lower is better) Translates to: GTGEREGRALTD*KIASCSQRSHV Trigger: AACATGACTGCGCTGTGAGCAACTTGCAATTTTTCAGTCTGTGAGAGCCCGCCCTTCCCTCTCCCCAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR TCA 72 bp | GCAGAGTTGTTACAGCAGGTTGGCAGGTTCACAGCGTaGGTTGATAACTTACTAAAGTGCGTGCCGCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: AELLQQVGRFTA*VDNLLKCVPRG Trigger: GCCCCGCGGCACGCACTTTAGTAAGTTATCAACTCACGCTGTGAACCTGCCAACCTGCTGTAACAACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR CCA 72 bp | GCTGAGTACTGCAGGTGGAATGATAAGAGGGTGGACTaGCCGACACAGCTTCCTTCCTTCAACTGCAATCTC | + |
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Preference number: 3 (lower is better) Translates to: AEYCRWNDKRVD*PTQLPSFNCNL Trigger: GAGATTGCAGTTGAAGGAAGGAAGCTGTGTCGGCCAGTCCACCCTCTTATCATTCCACCTGCAGTACTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR CCA 72 bp | AAGAAGCTGAGTACTGCAGGTGGAATGATAAGAGGGTaGACTGGCCGACACAGCTTCCTTCCTTCAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: KKLSTAGGMIRG*TGRHSFLPSTA Trigger: TGCAGTTGAAGGAAGGAAGCTGTGTCGGCCAGTCCACCCTCTTATCATTCCACCTGCAGTACTCAGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR GCA 72 bp | GGAGAGGGAAGGGCGGGCTCTCACAGACTGAAAAATTaGAAGTTGCTCACAGCGCAGTCATGTTTTCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: GEGRAGSHRLKN*KLLTAQSCFQK Trigger: TTTTTGAAAACATGACTGCGCTGTGAGCAACTTGCAATTTTTCAGTCTGTGAGAGCCCGCCCTTCCCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| 3UTR-3UTR CAA 90 bp | AAAATCACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAGGCAGATCTTGTTCTTaGGGGGTGGAGGGGATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KITSCNFSAVLLWPCSEKGRSCS*GVEGIV Trigger: AACTATCCCCTCCACCCCCAAAGAACAAGATCTGCC...TTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGTGATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CCA 90 bp | ATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGGCCATAGGCCGGGATTaGGGGCGGGGGCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MQHSGLGKLPLSPHWKVGAIGRD*GRGRCS Trigger: GCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGC...CCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTGCCATAGGCCGGGATTaGGGGCGGGGGCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CNTQASESFLSPHIGRLGAIGRD*GRGRCS Trigger: GCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGC...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGCCATAGGCCGGGATTaGGGGCGGGGGCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVAIGRD*GRGRCS Trigger: GCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGC...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTGGTTGTGTCTGGGGCTaGCCGTCGGTCGGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ATLRPRKASSLPTLEGWVGCVWG*PSVGAA Trigger: TGCAGCCCCGACCGACGGCCAGCCCCAGACACAACC...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTCCACGGCCTCGAAGGTaGGCCCCTCGGTATGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ATLRPRKASSLPTLEGWVPRPRR*APRYAA Trigger: AGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGG...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTCCACGGCCTCGAAGGTaGGCCCCTCGGTATGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CNTQASESFLSPHIGRLGPRPRR*APRYAA Trigger: AGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGG...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCGGGGCGCTGCAGCCCTaGAGGTGTTGTACACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: CPTACDATLRPRKASSLPGALQP*RCCTRC Trigger: GCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCC...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTGTGAGCCCCTCGGTATaGAGCTGCAGCAGTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ATLRPRKASSLPTLEGWVVSPSV*SCSSGG Trigger: GCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCAC...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | ATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTGGGGGCGGGGGCGCTaGAGCCCTGAAGGTGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: MQHSGLGKLPLSPHWKVGWGRGR*SPEGVV Trigger: TACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCA...CCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGTTGTGTCTGGGGCTaGCCGTCGGTCGGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVGCVWG*PSVGAA Trigger: TGCAGCCCCGACCGACGGCCAGCCCCAGACACAACC...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGGCGCTGCAGCCCTaGAGGTGTTGTACACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVGALQP*RCCTRC Trigger: GCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCC...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGGGCGCTGCAGCCCTaGAGGTGTTGTACACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ACDATLRPRKASSLPTLEGALQP*RCCTRC Trigger: GCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCC...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGTGAGCCCCTCGGTATaGAGCTGCAGCAGTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ACDATLRPRKASSLPTLEVSPSV*SCSSGG Trigger: GCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCAC...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAATGGGGGCGGGGGCGCTaGAGCCCTGAAGGTGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: ACDATLRPRKASSLPTLEWGRGR*SPEGVV Trigger: TACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCA...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTGGTTGTGTCTGGGGCTaGCCGTCGGTCGGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFGCVWG*PSVGAA Trigger: TGCAGCCCCGACCGACGGCCAGCCCCAGACACAACC...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGTCAGAAGGTTGTGTCTaGGGCTGGCCGTCGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWSEGCV*GWPSVG Trigger: CCCGACCGACGGCCAGCCCCAGACACAACCTTCTGA...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGTCAGGGGCGGCGGCTaGTTCCTGATTACCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TACDATLRPRKASSLPTLVRGGG*FLITPQ Trigger: CTGAGGGGTAATCAGGAAGCAGCCGCCGCCCCTGAC...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR GCA 90 bp | TGGGTAGGTAAGAAGCTGAGTACTGCAGGTGGAATGATAAGAGGGTGGACTGGCGTGAGCCCCTCGGTATaGAGCTGCAGCAGTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WVGKKLSTAGGMIRGWTGVSPSV*SCSSGG Trigger: GCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCAC...GCCAGTCCACCCTCTTATCATTCCACCTGCAGTACTCAGCTTCTTACCTACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR GCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGGTCAGGGGCGGCGGCTaGTTCCTGATTACCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWVRGGG*FLITSG Trigger: ACCACTGGTAATCAGGAAGCAGCCGCCGCCCCTGAC...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGTCAGGGACAGTGGTCTaGCCGGTGTACTCTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: TACDATLRPRKASSLPTLSGTVV*PVYSGA Trigger: CGCGCCAGAGTACACCGGCCAGACCACTGTCCCTGA...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTCCCTCCTGGTTGGCCTaGCACAACAGCACCGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGPSWLA*HNSTVP Trigger: AGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGG...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056416.9 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTCCCTCCTGGTTGGCCTaGCACAACAGCACCGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVPSWLA*HNSTVP Trigger: AGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGG...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056416.9 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGCACCAACGCCGTAGGTaGGGGCTGGAGCAAGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWHQRRR*GLEQVC Trigger: ACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTG...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTCCCTCCTGGTTGGCCTaGCACAACAGCACCGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVPSWLA*HNSTVP Trigger: TGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGG...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231088.2 |
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| CDS-3UTR GCA 90 bp | ATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGAGGTGTTGTACACGGTaGGACCACGGCCTCGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: MQHSGLGKLPLSPHWKVGRCCTR*DHGLEG Trigger: ACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCT...CCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAGGTGTTGTACACGGTaGGACCACGGCCTCGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWRCCTR*DHGLEG Trigger: ACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCT...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCGCAGGGATGCCATTCTaGGGTGGTGCGAACTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSAGMPF*GGANCA Trigger: AGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGC...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTGCAGGGATGCCATTCTaGGGTGGTGCGAACTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGAGMPF*GGANCA Trigger: AGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGC...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTCAGGGACAGTGGTCTaGCCGGTGTACTCTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFSGTVV*PVYSGA Trigger: CGCGCCAGAGTACACCGGCCAGACCACTGTCCCTGA...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTTCAGAAGGTTGTGTCTaGGGCTGGCCGTCGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFSEGCV*GWPSVG Trigger: CCCGACCGACGGCCAGCCCCAGACACAACCTTCTGA...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTAAGATCCCTCCTGGTTaGCCTGGCACAACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ATLRPRKASSLPTLEGWVKIPPG*PGTTAP Trigger: CGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTT...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCGCCGTAGGTGGGGGCTaGAGCAAGTGTGTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSAVGGG*SKCVVV Trigger: TACCACCACACACTTGCTCCAGCCCCCACCTACGGC...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGCCGTAGGTGGGGGCTaGAGCAAGTGTGTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ACDATLRPRKASSLPTLEAVGGG*SKCVVV Trigger: TACCACCACACACTTGCTCCAGCCCCCACCTACGGC...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGCACCAACGCCGTAGGTaGGGGCTGGAGCAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TACDATLRPRKASSLPTLHQRRR*GLEQVC Trigger: ACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTG...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGAGGTGTTGTACACGGTaGGACCACGGCCTCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TACDATLRPRKASSLPTLRCCTR*DHGLEG Trigger: ACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCT...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGTCAGAAGGTTGTGTCTaGGGCTGGCCGTCGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSCNFSAVLLWPCSEKGWSEGCV*GWPSVG Trigger: CCCGACCGACGGCCAGCCCCAGACACAACCTTCTGA...CCATCCTTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGACACATGCAGCCGCTTaGGCTGGGACTTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWTHAAA*AGTCFL Trigger: CAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGT...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTAAGATCCCTCCTGGTTaGCCTGGCACAACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGKIPPG*PGTTAP Trigger: CGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTT...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGATGGAAGATCCCTCCTaGTTGGCCTGGCACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWMEDPS*LAWHNS Trigger: GCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCAT...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTGGGGCCACTGTACATaGAAGATCCCTCCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MQHSGLGKLPLSPHWKVGWGHCT*KIPPGW Trigger: CCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCA...CCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTGCCGTAGGTGGGGGCTaGAGCAAGTGTGTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFAVGGG*SKCVVV Trigger: TACCACCACACACTTGCTCCAGCCCCCACCTACGGC...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTCACCAACGCCGTAGGTaGGGGCTGGAGCAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFHQRRR*GLEQVC Trigger: ACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTG...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTGCGCAAAAGCATTCATaGCACCAACGCCGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATLRPRKASSLPTLEGWVAQKHS*HQRRRW Trigger: CCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGC...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTGCGCAAAAGCATTCATaGCACCAACGCCGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNTQASESFLSPHIGRLGAQKHS*HQRRRW Trigger: CCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGC...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR GCA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTGTATTCTGCAGGGATaGCATTCTGGGGTGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CNTQASESFLSPHIGRLGCILQG*HSGVVR Trigger: TCGCACCACCCCAGAATGGCATCCCTGCAGAATACA...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR GCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTAGGTGTTGTACACGGTaGGACCACGGCCTCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFRCCTR*DHGLEG Trigger: ACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCT...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGGCAGGGATGCCATTCTaGGGTGGTGCGAACTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSCNFSAVLLWPCSEKGWAGMPF*GGANCA Trigger: AGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGC...CCATCCTTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CCA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCTGCAGCCGCTTGGGCTaGGACTTGCTTTCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPTACDATLRPRKASSLPCSRLG*DLLSVF Trigger: AAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCA...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTACACATGCAGCCGCTTaGGCTGGGACTTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGTHAAA*AGTCFL Trigger: CAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGT...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTCATTTGTCGGAGGTCTaGATCCCGGAACCGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGHLSEV*IPEPER Trigger: CCTTTCCGGTTCCGGGATCCAGACCTCCGACAAATG...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCATGGAAGATCCCTCCTaGTTGGCCTGGCACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSMEDPS*LAWHNS Trigger: GCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCAT...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTGCGCAAAAGCATTCATaGCACCAACGCCGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGAQKHS*HQRRRW Trigger: CCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGC...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGCGCAAAAGCATTCATaGCACCAACGCCGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVAQKHS*HQRRRW Trigger: CCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGC...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCCCCACATCATCAGCATaGCTCCTAGTCTTGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: CPTACDATLRPRKASSLPPTSSA*LLVLAS Trigger: CGATGCCAAGACTAGGAGCCATGCTGATGATGTGGG...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAATGTATTCTGCAGGGATaGCATTCTGGGGTGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ACDATLRPRKASSLPTLECILQG*HSGVVR Trigger: TCGCACCACCCCAGAATGGCATCCCTGCAGAATACA...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | TGGGTAGGTAAGAAGCTGAGTACTGCAGGTGGAATGATAAGAGGGTGGACTGGCGCACTCTGCTCCGAGTaGGTCTGTGTAGGAGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: WVGKKLSTAGGMIRGWTGALCSE*VCVGGY Trigger: GTATCCTCCTACACAGACGCACTCGGAGCAGAGTGC...GCCAGTCCACCCTCTTATCATTCCACCTGCAGTACTCAGCTTCTTACCTACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR GCA 90 bp | AAAATCACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAATGGGGGCGGGGGCGCTaGAGCCCTGAAGGTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KITSCNFSAVLLWPCSEKWGRGR*SPEGVV Trigger: TACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCA...TTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGTGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTACACATGCAGCCGCTTaGGCTGGGACTTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFTHAAA*AGTCFL Trigger: CAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGT...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTCATTTGTCGGAGGTCTaGATCCCGGAACCGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFHLSEV*IPEPER Trigger: CCTTTCCGGTTCCGGGATCCAGACCTCCGACAAATG...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTCATTTGTCGGAGGTCTaGATCCCGGAACCGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFHLSEV*IPEPER Trigger: CCTTTCCGGTTCCGGGATCCAGACCTCCGACAAATG...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTATGGAAGATCCCTCCTaGTTGGCCTGGCACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFMEDPS*LAWHNS Trigger: GCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCAT...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTGGGGCCACTGTACATaGAAGATCCCTCCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFWGHCT*KIPPGW Trigger: CCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCA...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTCCCACATCATCAGCATaGCTCCTAGTCTTGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVPTSSA*LLVLAS Trigger: CGATGCCAAGACTAGGAGCCATGCTGATGATGTGGG...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTGTATTCTGCAGGGATaGCATTCTGGGGTGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFCILQG*HSGVVR Trigger: TCGCACCACCCCAGAATGGCATCCCTGCAGAATACA...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGGGCAGATCTTGTTCTTTGGGGTACAGGTTTAATGTGTaGTCAGGGACAGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLWPCSEKGWGRSCSLGYRFNV*SGTVVW Trigger: CCAGACCACTGTCCCTGACCACACATTAAACCTGTA...CCCCAAAGAACAAGATCTGCCCCATCCTTTTTCGGAGCAGGGCCAGAGCAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
||
| CDS-3UTR CCA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTACAGGTTTAATGTGTaGTCAGGGACAGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNTQASESFLSPHIGRLGYRFNV*SGTVVW Trigger: CCAGACCACTGTCCCTGACCACACATTAAACCTGTA...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTTGCAGCCGCTTGGGCTaGGACTTGCTTTCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFCSRLG*DLLSVF Trigger: AAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCA...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTCCCACATCATCAGCATaGCTCCTAGTCTTGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFPTSSA*LLVLAS Trigger: CGATGCCAAGACTAGGAGCCATGCTGATGATGTGGG...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGTACAGGTTTAATGTGTaGTCAGGGACAGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TACDATLRPRKASSLPTLYRFNV*SGTVVW Trigger: CCAGACCACTGTCCCTGACCACACATTAAACCTGTA...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAGGATGGTGCAGCCGCTTGGGCTaGGACTTGCTTTCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSCNFSAVLLWPCSEKGWCSRLG*DLLSVF Trigger: AAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCA...CCATCCTTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
||
| CDS-3UTR TCA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTCATTGGTGTAGGGGTTaGCAGTCTTCTTATTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATLRPRKASSLPTLEGWVHWCRG*QSSYLS Trigger: TGACAAATAAGAAGACTGTCAACCCCTACACCAATG...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
||
| CDS-3UTR CCA 90 bp | AAAATCACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAAAGATCCCTCCTGGTTaGCCTGGCACAACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KITSCNFSAVLLWPCSEKKIPPG*PGTTAP Trigger: CGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTT...TTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGTGATTTT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CCA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCTATATACAAGTGAACTaGGGCCACTGTACATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPTACDATLRPRKASSLPYIQVN*GHCTWK Trigger: CTTCCATGTACAGTGGCCCCAGTTCACTTGTATATA...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCATTGGTGTAGGGGTTaGCAGTCTTCTTATTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSHWCRG*QSSYLS Trigger: TGACAAATAAGAAGACTGTCAACCCCTACACCAATG...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTAGAAGTATATACAAGTaGACTGGGGCCACTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGRSIYK*TGATVH Trigger: ATGTACAGTGGCCCCAGTTCACTTGTATATACTTCT...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR TCA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTAGAAGTATATACAAGTaGACTGGGGCCACTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVRSIYK*TGATVH Trigger: ATGTACAGTGGCCCCAGTTCACTTGTATATACTTCT...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCCGGTATATACTAGCCTaGAATGAAGAAAGAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPTACDATLRPRKASSLPRYILA*NEERTR Trigger: TCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCG...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCTATATACAAGTGAACTaGGGCCACTGTACATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSYIQVN*GHCTWK Trigger: CTTCCATGTACAGTGGCCCCAGTTCACTTGTATATA...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGTTTATTGCCATACACTaGCTCTTGATACACTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWFIAIH*LLIHYS Trigger: GGAGTAGTGTATCAAGAGCCAGTGTATGGCAATAAA...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231031.2 |
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| CDS-3UTR TCA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTCATTGGTGTAGGGGTTaGCAGTCTTCTTATTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTQASESFLSPHIGRLGFHWCRG*QSSYLS Trigger: TGACAAATAAGAAGACTGTCAACCCCTACACCAATG...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGCGGTATATACTAGCCTaGAATGAAGAAAGAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TACDATLRPRKASSLPTLRYILA*NEERTR Trigger: TCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCG...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTCGGTATATACTAGCCTaGAATGAAGAAAGAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CDATLRPRKASSLPTLEGRYILA*NEERTR Trigger: TCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCG...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTTATATACAAGTGAACTaGGGCCACTGTACATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFYIQVN*GHCTWK Trigger: CTTCCATGTACAGTGGCCCCAGTTCACTTGTATATA...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR GCA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTCGGTATATACTAGCCTaGAATGAAGAAAGAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLRPRKASSLPTLEGWVFRYILA*NEERTR Trigger: TCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCG...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 90 bp | CAACACCGCCATAGGCCGGGATTGGGGGCGGGGGCGCTGCAGCCCTaGAGGTGTTGTACACGGTGCGACCACGGCCTCGAAGGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QHRHRPGLGAGALQP*RCCTRCDHGLEGEP Trigger: GGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 90 bp | CTACTCCGCCATAGGCCGGGATTGGGGGCGGGGGCGCTGCAGCCCTaGAGGTGTTGTACACGGTGCGACCACGGCCTCGAAGGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRHRPGLGAGALQP*RCCTRCDHGLEGEP Trigger: GGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGAGTAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000229741.2 ENSMUST00000231031.2 |
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| CDS TCA 90 bp | GCAGCCCTGAAGGTGTTGTACACGGTGCGACCACGGCCTCGAAGGTaGGCCCCTCGGTATGCAGCTGCAGCAGTGGCGGCCGGATATGGG | + |
|
Preference number: 5 (lower is better) Translates to: AALKVLYTVRPRPRR*APRYAAAAVAAGYG Trigger: CCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | CTGGTAAACAACACCGCCATAGGCCGGGATTGGGGGCGGGGGCGCTaGAGCCCTGAAGGTGTTGTACACGGTGCGACCACGGCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVNNTAIGRDWGRGR*SPEGVVHGATTASK Trigger: CTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTTGTTTACCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | CACGGTGCGACCACGGCCTCGAAGGTGAGCCCCTCGGTATGCAGCTaGAGCAGTGGCGGCCGGATATGGGAAGCCAGGCATTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HGATTASKVSPSVCS*SSGGRIWEARHCRS Trigger: ACTTCTGCAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | GTTGTACACGGTGCGACCACGGCCTCGAAGGTGAGCCCCTCGGTATaGAGCTGCAGCAGTGGCGGCCGGATATGGGAAGCCAGGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVHGATTASKVSPSV*SCSSGGRIWEARHC Trigger: GCAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | TTGATACACTACTCCGCCATAGGCCGGGATTGGGGGCGGGGGCGCTaGAGCCCTGAAGGTGTTGTACACGGTGCGACCACGGCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIHYSAIGRDWGRGR*SPEGVVHGATTASK Trigger: CTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGAGTAGTGTATCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000229741.2 ENSMUST00000231031.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCCGCCATAGGCCGGGATaGGGGGCGGGGGCGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CPTACDATLRPRKASSLPRHRPG*GAGALQ Trigger: CTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCG...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | GTCGGGGCTGCATCATCTGTCTGTGTGGCGGTGCCGGAGACGGTCTaGGCACTGGTGTCAGCACTCTGCTCCGAGTGCGTCTGTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: VGAASSVCVAVPETV*ALVSALCSECVCVG Trigger: TCCTACACAGACGCACTCGGAGCAGAGTGCTGACACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTCGCCATAGGCCGGGATaGGGGGCGGGGGCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CDATLRPRKASSLPTLEGRHRPG*GAGALQ Trigger: CTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCG...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAACGCCATAGGCCGGGATaGGGGGCGGGGGCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ACDATLRPRKASSLPTLERHRPG*GAGALQ Trigger: CTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCG...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | ACTCTGGCGCGGGATGAGGATGAGGGGCCGTGTATTCTGCAGGGATaGCATTCTGGGGTGGTGCGAACTGCGCTGAGGCATAAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLARDEDEGPCILQG*HSGVVRTALRHKAE Trigger: CTCAGCCTTATGCCTCAGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 90 bp | CGCTTGGGCTGGGACTTGCTTTCTGTGTTTTCAGAAGGTTGTGTCTaGGGCTGGCCGTCGGTCGGGGCTGCATCATCTGTCTGTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLGWDLLSVFSEGCV*GWPSVGAASSVCVA Trigger: CGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCAGCCCCAGACACAACCTTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | TGTGTGGCGGTGCCGGAGACGGTCTGCGCACTGGTGTCAGCACTCTaGTCCGAGTGCGTCTGTGTAGGAGGATACAGGTTTAATGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CVAVPETVCALVSAL*SECVCVGGYRFNVW Trigger: CCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGTGCTGACACCAGTGCGCAGACCGTCTCCGGCACCGCCACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | ATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGCATAAGGCTGAGCCATaGTGTCAGGGGCGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MQHSGLGKLPLSPHWKVGHKAEP*CQGRRL Trigger: CAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATG...CCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056416.9 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTGCAGCCCTGAAGGTGTaGTACACGGTGCGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CNTQASESFLSPHIGRLGAALKV*YTVRPR Trigger: CCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGC...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGGCAGCCCTGAAGGTGTaGTACACGGTGCGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWAALKV*YTVRPR Trigger: CCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGC...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 90 bp | GTGCCGGAGACGGTCTGCGCACTGGTGTCAGCACTCTGCTCCGAGTaGGTCTGTGTAGGAGGATACAGGTTTAATGTGTGGTCAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VPETVCALVSALCSE*VCVGGYRFNVWSGT Trigger: TGTCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGTGCTGACACCAGTGCGCAGACCGTCTCCGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 90 bp | TACCCTGCATCAGTCCCGGGAAGTAGGGGGCAGCAGGCACAATCATaGGCACGCCATAAGAATGCAGAAGGACTCCTTGCGACGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: YPASVPGSRGQQAQS*ARHKNAEGLLATPT Trigger: TGTTGGCGTCGCAAGGAGTCCTTCTGCATTCTTATGGCGTGCCCATGATTGTGCCTGCTGCCCCCTACTTCCCGGGACTGATGCAGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229741.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTCATAAGGCTGAGCCATaGTGTCAGGGGCGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CDATLRPRKASSLPTLEGHKAEP*CQGRRL Trigger: CAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATG...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056416.9 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTGAAGATCCCTCCTGGTaGGCCTGGCACAACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ATLRPRKASSLPTLEGWVEDPSW*AWHNST Trigger: GGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTC...AACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGCAGCCCTGAAGGTGTaGTACACGGTGCGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVAALKV*YTVRPR Trigger: CCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGC...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | AAAATCACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAACGCCATAGGCCGGGATaGGGGGCGGGGGCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KITSCNFSAVLLWPCSEKRHRPG*GAGALQ Trigger: CTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCG...TTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGTGATTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CAA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGGCATGGCTCCTAGTCTaGGCATCGGTCAAGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWAWLLV*ASVKGA Trigger: TGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGC...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 90 bp | ATACAAGTGAACTGGGGCCACTGTACATGGAAGATCCCTCCTGGTTaGCCTGGCACAACAGCACCGTGCCTGCATAGAAGTCGGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IQVNWGHCTWKIPPG*PGTTAPCLHRSRGC Trigger: ACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCGACACATGCAGCCGCTaGGGCTGGGACTTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPTACDATLRPRKASSLPDTCSR*GWDLLS Trigger: AGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTC...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTGACACATGCAGCCGCTaGGGCTGGGACTTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CNTQASESFLSPHIGRLGDTCSR*GWDLLS Trigger: AGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTC...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCGAAGATCCCTCCTGGTaGGCCTGGCACAACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSEDPSW*AWHNST Trigger: GGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTC...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGATCCCTCCTGGTaGGCCTGGCACAACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TACDATLRPRKASSLPTLEDPSW*AWHNST Trigger: GGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTC...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTGCATGGCTCCTAGTCTaGGCATCGGTCAAGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CDATLRPRKASSLPTLEGAWLLV*ASVKGA Trigger: TGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGC...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 90 bp | GGCGGCCGGATATGGGAAGCCAGGCATTGCAGAAGTATATACAAGTaGACTGGGGCCACTGTACATGGAAGATCCCTCCTGGTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRIWEARHCRSIYK*TGATVHGRSLLVGL Trigger: CAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCAATGCCTGGCTTCCCATATCCGGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAACCGGAAAGGGATGTaGGACACATGCAGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWNRKGM*DTCSRL Trigger: CAAGCGGCTGCATGTGTCCAACATCCCTTTCCGGTT...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTGCATGGCTCCTAGTCTaGGCATCGGTCAAGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLRPRKASSLPTLEGWVFAWLLV*ASVKGA Trigger: TGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGC...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTGCATGGCTCCTAGTCTaGGCATCGGTCAAGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: NTQASESFLSPHIGRLGFAWLLV*ASVKGA Trigger: TGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGC...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCTGTGTTTTCAGAAGGTaGTGTCTGGGGCTGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSCVFRR*CLGLAV Trigger: GACGGCCAGCCCCAGACACAACCTTCTGAAAACACA...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTGACACATGCAGCCGCTaGGGCTGGGACTTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NTQASESFLSPHIGRLGFDTCSR*GWDLLS Trigger: AGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTC...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTAACCGGAAAGGGATGTaGGACACATGCAGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CDATLRPRKASSLPTLEGNRKGM*DTCSRL Trigger: CAAGCGGCTGCATGTGTCCAACATCCCTTTCCGGTT...ACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTTGTGTTTTCAGAAGGTaGTGTCTGGGGCTGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLRPRKASSLPTLEGWVFCVFRR*CLGLAV Trigger: GACGGCCAGCCCCAGACACAACCTTCTGAAAACACA...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTGTGTTTTCAGAAGGTaGTGTCTGGGGCTGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: NTQASESFLSPHIGRLGFCVFRR*CLGLAV Trigger: GACGGCCAGCCCCAGACACAACCTTCTGAAAACACA...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCCGCTTGGGCTGGGACTaGCTTTCTGTGTTTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CPTACDATLRPRKASSLPRLGWD*LSVFSE Trigger: TTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCG...GGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAACGCTTGGGCTGGGACTaGCTTTCTGTGTTTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ACDATLRPRKASSLPTLERLGWD*LSVFSE Trigger: TTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCG...TTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGCGCTTGGGCTGGGACTaGCTTTCTGTGTTTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TACDATLRPRKASSLPTLRLGWD*LSVFSE Trigger: TTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCG...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | CTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGATGGGAAGCCAGGCATaGCAGAAGTATATACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHVMQHSGLGKLPLSPHWMGSQA*QKYIQV Trigger: CACTTGTATATACTTCTGCAATGCCTGGCTTCCCAT...CCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | TGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTATGGAGCAAAACGGTaGTATCCCCCTCGGTATATA | + |
|
Preference number: 5 (lower is better) Translates to: CNTQASESFLSPHIGRLGYGAKR*YPPRYI Trigger: TATATACCGAGGGGGATACAACCGTTTTGCTCCATA...ACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | ACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTGCCATACACTGGCTCTaGATACACTACTCCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: TLRPRKASSLPTLEGWVFAIHWL*IHYSAI Trigger: TATGGCGGAGTAGTGTATCAAGAGCCAGTGTATGGC...AAAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231031.2 |
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| CDS-3UTR CAA 90 bp | ACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGATGGGAAGCCAGGCATaGCAGAAGTATATACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TACDATLRPRKASSLPTLMGSQA*QKYIQV Trigger: CACTTGTATATACTTCTGCAATGCCTGGCTTCCCAT...CAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GATGTCCTACTGCATGTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCATGGGAAGCCAGGCATaGCAGAAGTATATACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DVLLHVMQHSGLGKLPLSMGSQA*QKYIQV Trigger: CACTTGTATATACTTCTGCAATGCCTGGCTTCCCAT...GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | GTGATGCAACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTTATGGAGCAAAACGGTaGTATCCCCCTCGGTATATA | + |
|
Preference number: 5 (lower is better) Translates to: VMQHSGLGKLPLSPHWKVYGAKR*YPPRYI Trigger: TATATACCGAGGGGGATACAACCGTTTTGCTCCATA...AACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 90 bp | ATACTAGCCTGCAATGAAGAAAGAACGAGACCCACATCATCAGCATaGCTCCTAGTCTTGGCATCGGTCAAGGGCGCAAAAGCATTCATG | + |
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Preference number: 5 (lower is better) Translates to: ILACNEERTRPTSSA*LLVLASVKGAKAFM Trigger: CATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS-3UTR CAA 90 bp | AAAATCACAAGTTGCAATTTTTCGGCTGTGTTGCTCTGGCCCTGCTCCGAAAAAAACCGGAAAGGGATGTaGGACACATGCAGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KITSCNFSAVLLWPCSEKNRKGM*DTCSRL Trigger: CAAGCGGCTGCATGTGTCCAACATCCCTTTCCGGTT...TTTTTCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAACTTGTGATTTT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056416.9 |
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| CDS-3UTR CAA 90 bp | AACACTCAGGCCTCGGAAAGCTTCCTCTCTCCCCACATTGGAAGGTTGGGTTTTTATGGAGCAAAACGGTaGTATCCCCCTCGGTATATA | + |
|
Preference number: 5 (lower is better) Translates to: NTQASESFLSPHIGRLGFYGAKR*YPPRYI Trigger: TATATACCGAGGGGGATACAACCGTTTTGCTCCATA...AAAACCCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 90 bp | TGGAGCAAAACGGTTGTATCCCCCTCGGTATATACTAGCCTGCAATaGAGAAAGAACGAGACCCACATCATCAGCATGGCTCCTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSKTVVSPSVYTSLQ*RKNETHIISMAPSL Trigger: AAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | GGTGCGACCACGGCCTCGAAGGTGAGCCCCTCGGTATaGAGCTGCAGCAGTGGCGGCCGGATATGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GATTASKVSPSV*SCSSGGRIWEA Trigger: GGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 72 bp | AAGGTGTTGTACACGGTGCGACCACGGCCTCGAAGGTaGGCCCCTCGGTATGCAGCTGCAGCAGTGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KVLYTVRPRPRR*APRYAAAAVAA Trigger: GGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | AGAAGGTTGTGTCTGGGGCTGGCCGTCGGTCGGGGCTaGATCATCTGTCTGTGTGGCGGTGCCGGAGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRLCLGLAVGRG*IICLCGGAGDG Trigger: ACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCAGCCCCAGACACAACCTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | ACCACGGCCTCGAAGGTGAGCCCCTCGGTATGCAGCTaGAGCAGTGGCGGCCGGATATGGGAAGCCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: TTASKVSPSVCS*SSGGRIWEARH Trigger: ATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | CTCTGGCGCGGGATGAGGATGAGGGGCCGTGTATTCTaGAGGGATGCCATTCTGGGGTGGTGCGAACTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LWRGMRMRGRVF*RDAILGWCELR Trigger: GCGCAGTTCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | GCATCATCTGTCTGTGTGGCGGTGCCGGAGACGGTCTaGGCACTGGTGTCAGCACTCTGCTCCGAGTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSVCVAVPETV*ALVSALCSECV Trigger: GACGCACTCGGAGCAGAGTGCTGACACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | AAGATCCCTCCTGGTTGGCCTGGCACAACAGCACCGTaGCTGCATAGAAGTCGGGGCTGTAGACCGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KIPPGWPGTTAP*LHRSRGCRPRP Trigger: TGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231194.2 |
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| CDS CCA 72 bp | TGTGTGGTCAGGGACAGTGGTCTGGCCGGTGTACTCTaGCGCGGGATGAGGATGAGGGGCCGTGTATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CVVRDSGLAGVL*RGMRMRGRVFC Trigger: GCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGTACACCGGCCAGACCACTGTCCCTGACCACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 72 bp | TCCATCCTGGTAAACAACACCGCCATAGGCCGGGATTaGGGGCGGGGGCGCTGCAGCCCTGAAGGTGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SILVNNTAIGRD*GRGRCSPEGVV Trigger: TACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTTGTTTACCAGGATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 72 bp | TGGCTCTTGATACACTACTCCGCCATAGGCCGGGATTaGGGGCGGGGGCGCTGCAGCCCTGAAGGTGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WLLIHYSAIGRD*GRGRCSPEGVV Trigger: TACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGAGTAGTGTATCAAGAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229741.2 ENSMUST00000231031.2 |
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| CDS GCA 72 bp | CGGGATGAGGATGAGGGGCCGTGTATTCTGCAGGGATaGCATTCTGGGGTGGTGCGAACTGCGCTGAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RDEDEGPCILQG*HSGVVRTALRH Trigger: ATGCCTCAGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CAA 90 bp | CATTCTGGGGTGGTGCGAACTGCGCTGAGGCATAAGGCTGAGCCATaGTGTCAGGGGCGGCGGCTGCTTCCTGATTACCCTGCATCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSGVVRTALRHKAEP*CQGRRLLPDYPASV Trigger: GACTGATGCAGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCCTCAGCGCAGTTCGCACCACCCCAGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229741.2 |
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| CDS GCA 72 bp | GTGCCGGAGACGGTCTGCGCACTGGTGTCAGCACTCTaGTCCGAGTGCGTCTGTGTAGGAGGATACAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VPETVCALVSAL*SECVCVGGYRF Trigger: AAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGTGCTGACACCAGTGCGCAGACCGTCTCCGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | GGCATAAGGCTGAGCCATTGTGTCAGGGGCGGCGGCTaGTTCCTGATTACCCTGCATCAGTCCCGGGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GIRLSHCVRGGG*FLITLHQSREV Trigger: TACTTCCCGGGACTGATGCAGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229741.2 |
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| CDS GCA 72 bp | GGCATAAGGCTGAGCCATTGTGTCAGGGGCGGCGGCTaGTTCCTGATTACCCCTCAGCTGCTCTCTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: GIRLSHCVRGGG*FLITPQLLSFT Trigger: TGTGAAAGAGAGCAGCTGAGGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000230658.2 |
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| CDS CCA 72 bp | AACTGGGGCCACTGTACATGGAAGATCCCTCCTGGTTaGCCTGGCACAACAGCACCGTGCCATTGGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: NWGHCTWKIPPG*PGTTAPCHWCR Trigger: CCTACACCAATGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231088.2 |
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| CDS GCA 72 bp | GGCATAAGGCTGAGCCATTGTGTCAGGGGCGGCGGCTaGTTCCTGATTACCAGTGGTGATCACGTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GIRLSHCVRGGG*FLITSGDHVVR Trigger: TCTGACAACGTGATCACCACTGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231194.2 |
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| CDS CCA 72 bp | AACTGGGGCCACTGTACATGGAAGATCCCTCCTGGTTaGCCTGGCACAACAGCACCGTGCCTGCATAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: NWGHCTWKIPPG*PGTTAPCLHRS Trigger: ACTTCTATGCAGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | ACGGTCTGCGCACTGGTGTCAGCACTCTGCTCCGAGTaGGTCTGTGTAGGAGGATACAGGTTTAATGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: TVCALVSALCSE*VCVGGYRFNVW Trigger: CCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGTGCTGACACCAGTGCGCAGACCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CAA 90 bp | GGTATGCAGCTGCAGCAGTGGCGGCCGGATATGGGAAGCCAGGCATaGCAGAAGTATATACAAGTGAACTGGGGCCACTGTACATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GMQLQQWRPDMGSQA*QKYIQVNWGHCTWK Trigger: CTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CAA 72 bp | AGAACGAGACCCACATCATCAGCATGGCTCCTAGTCTaGGCATCGGTCAAGGGCGCAAAAGCATTCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: RTRPTSSAWLLV*ASVKGAKAFMA Trigger: TGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CAA 90 bp | AATGAAGAAAGAACGAGACCCACATCATCAGCATGGCTCCTAGTCTaGGCATCGGTCAAGGGCGCAAAAGCATTCATGGCACCAACGCCG | + |
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Preference number: 6 (lower is better) Translates to: NEERTRPTSSAWLLV*ASVKGAKAFMAPTP Trigger: CGGCGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 72 bp | CAGAAGTATATACAAGTGAACTGGGGCCACTGTACATaGAAGATCCCTCCTGGTTGGCCTGGCACAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QKYIQVNWGHCT*KIPPGWPGTTA Trigger: TGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS CCA 72 bp | TGCAATGAAGAAAGAACGAGACCCACATCATCAGCATaGCTCCTAGTCTTGGCATCGGTCAAGGGCGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: CNEERTRPTSSA*LLVLASVKGAK Trigger: TTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 72 bp | ATATGGGAAGCCAGGCATTGCAGAAGTATATACAAGTaGACTGGGGCCACTGTACATGGAAGATCCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IWEARHCRSIYK*TGATVHGRSLL Trigger: CAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCAATGCCTGGCTTCCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS TCA 72 bp | ACGGTTGTATCCCCCTCGGTATATACTAGCCTGCAATaGAGAAAGAACGAGACCCACATCATCAGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: TVVSPSVYTSLQ*RKNETHIISMA Trigger: AGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | GTAGGGGTTGACAGTCTTCTTATTTGTCATCACGCGTaGTGTCGCATTATTAACCTCGATTTTACGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: VGVDSLLICHHA*CRIINLDFTAL Trigger: GAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAGAAGACTGTCAACCCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000230658.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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| CDS GCA 72 bp | GCAAAACGGTTGTATCCCCCTCGGTATATACTAGCCTaGAATGAAGAAAGAACGAGACCCACATCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AKRLYPPRYILA*NEERTRPTSSA Trigger: TGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000056416.9 ENSMUST00000115841.10 ENSMUST00000229741.2 ENSMUST00000231031.2 ENSMUST00000231088.2 ENSMUST00000231194.2 |
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