Pregenerated sensors for RBCK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027466Ensembl transcript IDs: ENSMUST00000028964.14, ENSMUST00000109847.9, ENSMUST00000144865.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTTACCAAGCCTAAAGGTATGGGGCCAAACCAGGCCAGTCCCTTaGCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: PLPSLKVWGQTRPVP*LALLFTAIHVGLGQ Trigger: CTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCCCCATACCTTTAGGCTTGGTAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGCAGAGGCAGTGCGAATaGCATCAGCTCAGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: AKDEAVVGPQGASSGKIEQRQCE*HQLSWV Trigger: GACCCAGCTGAGCTGATGTCATTCGCACTGCCTCTG...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAACAGGGCCATGAGGTCTaGTCAGCCAGAAGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ARQRMRLWWVLREQAQGKQGHEV*SARSNR Trigger: TCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGCCATCTAGTGCAGGGCCATaGGGTCTGGTCAGCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: KLRENRVTQSTSQPGLRPSSAGP*GLVSQK Trigger: CTTCTGGCTGACCAGACCTCATGGCCCTGCACTAGA...TGGCCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAACCAGGCCAGTCCCTTaGCTAGCCCTGCTGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: VVGPQGASSGKIESLRALTRPVP*LALLFT Trigger: AGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGT...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGCAGGGCCATGAGGTCTaGTCAGCCAGAAGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: SKLRENRVTQSTSQPGLRQGHEV*SARSNR Trigger: TCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTCAGAGGCAGTGCGAATaGCATCAGCTCAGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KEEDAELNPMGCFLTYQSQRQCE*HQLSWV Trigger: GACCCAGCTGAGCTGATGTCATTCGCACTGCCTCTG...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTTCTAGTGCAGGGCCATaGGGTCTGGTCAGCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: KEEDAELNPMGCFLTYQSSSAGP*GLVSQK Trigger: CTTCTGGCTGACCAGACCTCATGGCCCTGCACTAGA...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTACCAGGCCAGTCCCTTaGCTAGCCCTGCTGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: KEEDAELNPMGCFLTYQSTRPVP*LALLFT Trigger: AGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGT...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACTATACATGTGGGGCTaGGTCAGTATGAGAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: VVGPQGASSGKIESLRALLYMWG*VSMRAT Trigger: GGTGGCTCTCATACTGACCCAGCCCCACATGTATAG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR TCA 72 bp | GTGGCTAGTAAGGGTCGGGTGTCTAGTGCAGGGCCATaGGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VASKGRVSSAGP*GLVSQKQQRQC Trigger: GCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTGCACTAGACACCCGACCCTTACTAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR GCA 72 bp | AGCCTAAAGGTATGGGGCCAAACCAGGCCAGTCCCTTaGCTAGCCCTGCTGTTCACTGCTATACATGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SLKVWGQTRPVP*LALLFTAIHVG Trigger: CCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCCCCATACCTTTAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| 3UTR TCA 72 bp | GGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATaGCATCAGCTCAGCTGGGTCCTTGTAACACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GLVSQKQQRQCE*HQLSWVLVTQQ Trigger: TTGCTGTGTTACAAGGACCCAGCTGAGCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGCCCTGGGCCCCAGCGTaGGCCCTTGGTGACCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQPWAPA*ALGDPA Trigger: TGCTGGGTCACCAAGGGCCCACGCTGGGGCCCAGGG...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGAGCGGCAGCCACCACTaGTGTCCCCTGGGCCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GQTRPVPCLALLFTAIHVSGSHH*CPLGPL Trigger: CAGGGGGCCCAGGGGACACCAGTGGTGGCTGCCGCT...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAAAGCGGCAGCCACCACTaGTGTCCCCTGGGCCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKSGSHH*CPLGPL Trigger: CAGGGGGCCCAGGGGACACCAGTGGTGGCTGCCGCT...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAAGTGCAGCCAGGGCACTaGCAGCCCACCGGTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKVQPGH*QPTGGD Trigger: GTCACCACCGGTGGGCTGGCAGTGCCCTGGCTGCAC...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCCGGCACTGTGGGCAGTaGATGGCCTCGCCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISRHCGQ*MASPCC Trigger: GCAGCAGGGCGAGGCCATGCACTGCCCACAGTGCCG...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGCCACCTCCGCCTCCTaGCTGTTTCGGATGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQATSAS*LFRMVP Trigger: GGGCACCATCCGAAACAGCCAGGAGGCGGAGGTGGC...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR TCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCGGCATGGAATCCCATTaGCCCGGCAGCGGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISGMESH*PGSGSH Trigger: GTGGCTGCCGCTGCCGGGTCAATGGGATTCCATGCC...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | AGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTAGTGCAGCCAGGGCACTaGCAGCCCACCGGTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SPLPSPAVHCYTCGAGSVVQPGH*QPTGGD Trigger: GTCACCACCGGTGGGCTGGCAGTGCCCTGGCTGCAC...TACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGAGCACCAGGCTCCTCTaGTCCAGCTGCACGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQSTRLL*SSCTCC Trigger: GCAGCACGTGCAGCTGGAGCAGAGGAGCCTGGTGCT...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCTCAGCTCGGCACTGTGGGCAGTaGATGGCCTCGCCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EVWSARSNRGSANDISSARHCGQ*MASPCC Trigger: GCAGCAGGGCGAGGCCATGCACTGCCCACAGTGCCG...AGCTGAGCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACCCTGGGCCCCAGCGTaGGCCCTTGGTGACCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VVGPQGASSGKIESLRALPWAPA*ALGDPA Trigger: TGCTGGGTCACCAAGGGCCCACGCTGGGGCCCAGGG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR TCA 90 bp | AGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTAGGCATGGAATCCCATTaGCCCGGCAGCGGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SPLPSPAVHCYTCGAGSVGMESH*PGSGSH Trigger: GTGGCTGCCGCTGCCGGGTCAATGGGATTCCATGCC...TACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGGCACCCTCTGCTCTaGCAGCCAGGTGGCATACTT | + |
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Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQGHPLL*QPGGIL Trigger: AAGTATGCCACCTGGCTGGCAGAGCAGAGGGTGCCC...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | AGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTACTGAGGGGCACCCTCTaGTCTGCCAGCCAGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SPLPSPAVHCYTCGAGSVLRGTL*SASQVA Trigger: TGCCACCTGGCTGGCAGAGCAGAGGGTGCCCCTCAG...TACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGCCAACCACCCACTGCTaGAGGCTAGGTGGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQPTTHC*RLGGKP Trigger: TGGCTTCCCACCTAGCCTGCAGCAGTGGGTGGTTGG...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAAAGCACCAGGCTCCTCTaGTCCAGCTGCACGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKSTRLL*SSCTCC Trigger: GCAGCACGTGCAGCTGGAGCAGAGGAGCCTGGTGCT...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAAACTGTGGGCAGTGCATaGCCTCGCCCTGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKTVGSA*PRPAAA Trigger: TGCTGCAGCAGGGCGAGGCCATGCACTGCCCACAGT...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAACACAATCCGGCACTGTaGGCAGTGCATGGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKHNPAL*AVHGLA Trigger: GGCGAGGCCATGCACTGCCCACAGTGCCGGATTGTG...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCCACAATCCGGCACTGTaGGCAGTGCATGGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISHNPAL*AVHGLA Trigger: GGCGAGGCCATGCACTGCCCACAGTGCCGGATTGTG...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR TCA 90 bp | CAGGGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCGCAGCTCTTGTGGGTTaGGTGACGTGTTGCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QGHEVWSARSNRGSANDIAALVG*VTCCGL Trigger: CAGCCCGCAACACGTCACTCAACCCACAAGAGCTGC...GATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR TCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATGCAGAGCAGGCAGTTaGCACGGGTGCACACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKCRAGS*HGCTQD Trigger: GTCCTGTGTGCACCCGTGTCAACTGCCTGCTCTGCA...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCGGTCTCCTGGTCTCGTaGCAGCCTCTGTCCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISGLLVS*QPLSNH Trigger: GTGGTTGGACAGAGGCTGGCACGAGACCAGGAGACC...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGTTTCGGATGGTGCCCTaGAGGCACTCCCTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQFRMVP*RHSLQK Trigger: CTTCTGCAGGGAGTGCCTGCAGGGCACCATCCGAAA...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGGGCTGTTTCGGATGGTaGCCTGCAGGCACTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIEGCFGW*PAGTPC Trigger: GCAGGGAGTGCCTGCAGGGCACCATCCGAAACAGCC...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | CAGGGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCCTCTCTCCAGCAGCTTaGCGGGGCATGAGTAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QGHEVWSARSNRGSANDILSPAA*RGMSRC Trigger: GCACCTACTCATGCCCCGGCAAGCTGCTGGAGAGAG...GATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCCTCTCTCCAGCAGCTTaGCGGGGCATGAGTAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISLSPAA*RGMSRC Trigger: GCACCTACTCATGCCCCGGCAAGCTGCTGGAGAGAG...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR CCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTGCTGTTTCCGCTGCTaGTACTGGCGCAGCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIECCFRC*YWRSAS Trigger: GGAGGCGCTGCGCCAGTACCAGCAGCGGAAACAGCA...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR TCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAAGTTTTACTTGCACCCTaGGGGGCACCCTCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKVLLAP*GAPSAL Trigger: CAGAGCAGAGGGTGCCCCTCAGGGTGCAAGTAAAAC...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR TCA 90 bp | AGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGCAGAGCAGGCAGTTaGCACGGGTGCACACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SPLPSPAVHCYTCGAGSVCRAGS*HGCTQD Trigger: GTCCTGTGTGCACCCGTGTCAACTGCCTGCTCTGCA...TACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGGGTCTCCTGGTCTCGTaGCAGCCTCTGTCCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIEGLLVS*QPLSNH Trigger: GTGGTTGGACAGAGGCTGGCACGAGACCAGGAGACC...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS-3UTR GCA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGTCCAACATTCGCAGTTaGCGCTGCCGCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPVPCLALLFTAIHVSNIRS*RCRCSS Trigger: AGAGCTGCAGCGGCAGCGGCAACTGCGAATGTTGGA...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGCCTGCAGGCACTCCCTaGAGAAGGTGTGCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPVPCLALLFTAIHVPAGTP*RRCADT Trigger: AGTGTCTGCACACCTTCTGCAGGGAGTGCCTGCAGG...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGCCATGCTGTTTCCGCTGCTaGTACTGGCGCAGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLRENRVTQSTSQPGLRPCCFRC*YWRSAS Trigger: GGAGGCGCTGCGCCAGTACCAGCAGCGGAAACAGCA...TGGCCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACCTGGCTGTTTCGGATaGTGCCCTGCAGGCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVGPQGASSGKIESLRALPGCFG*CPAGTP Trigger: GGGAGTGCCTGCAGGGCACCATCCGAAACAGCCAGG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGAACTGTGGGCAGTGCATaGCCTCGCCCTGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFTAIHVGLGQYESHHRRTVGSA*PRPAAA Trigger: TGCTGCAGCAGGGCGAGGCCATGCACTGCCCACAGT...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCCACTCACACAGAGCCTaGTGTCCTGTGTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGHEVWSARSNRGSANDIHSHRA*CPVLGR Trigger: TCTCCCCAACACAGGACATCAGGCTCTGTGTGAGTG...GATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTGTCCAACCACCCACTaGTGCAGGCTAGGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIECPTTH*CRLGGK Trigger: CTTCCCACCTAGCCTGCAGCAGTGGGTGGTTGGACA...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCTCAGCTTGTCCAACCACCCACTaGTGCAGGCTAGGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVWSARSNRGSANDISSACPTTH*CRLGGK Trigger: CTTCCCACCTAGCCTGCAGCAGTGGGTGGTTGGACA...AGCTGAGCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | TGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCCTGCAGGCACTCCCTaGAGAAGGTGTGCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: CLALLFTAIHVGLGQYESPAGTP*RRCADT Trigger: AGTGTCTGCACACCTTCTGCAGGGAGTGCCTGCAGG...GCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCGGTGCTTCGGTTCTCTaGGATGGACACACCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QGHEVWSARSNRGSANDIGASVL*DGHTQI Trigger: GATCTGGGTGTGTCCATCGCAGAGAACCGAAGCACC...GATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTAAGAAGCACCAACCCCTaGAGTCGGGGGTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLPSPAVHCYTCGAGSVRSTNP*SRGSCS Trigger: ACTGCAAGACCCCCGACTGCAGGGGTTGGTGCTTCT...TACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGCAGCCGTCCTTCTTCTaGACCACAATCCGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPVPCLALLFTAIHVQPSFF*TTIRHC Trigger: ACAGTGCCGGATTGTGGTGCAGAAGAAGGACGGCTG...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAACAGCCGTCCTTCTTCTaGACCACAATCCGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKQPSFF*TTIRHC Trigger: ACAGTGCCGGATTGTGGTGCAGAAGAAGGACGGCTG...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAACTGCTGCAGGCTAGGTaGGAAGCCATAGTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARQRMRLWWVLREQAQGKLLQAR*EAIVQE Trigger: TTCCTGGACTATGGCTTCCCACCTAGCCTGCAGCAG...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCGAATGCAAGGTCTCCTaGTCTCGTGCCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISECKVS*SRASLC Trigger: ACAGAGGCTGGCACGAGACCAGGAGACCTTGCATTC...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTGCCACCTCCGCCTCCTaGCTGTTTCGGATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEEDAELNPMGCFLTYQSATSAS*LFRMVP Trigger: GGGCACCATCCGAAACAGCCAGGAGGCGGAGGTGGC...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGCAGCAGATCTCAGTGTaGCAGACTGTACAGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KPARQRMRLWWVLREQAQQQISV*QTVQRI Trigger: GATCCGCTGTACAGTCTGCCACACTGAGATCTGCTG...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR TCA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGAGTTTTACTTGCACCCTaGGGGGCACCCTCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTAIHVGLGQYESHHRRVLLAP*GAPSAL Trigger: CAGAGCAGAGGGTGCCCCTCAGGGTGCAAGTAAAAC...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR TCA 90 bp | TGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACTCACACAGAGCCTaGTGTCCTGTGTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLALLFTAIHVGLGQYESHSHRA*CPVLGR Trigger: TCTCCCCAACACAGGACATCAGGCTCTGTGTGAGTG...GCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGTCCCTGCAGAAGGTGTaGAGACACTCACGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SKLRENRVTQSTSQPGLRSLQKV*RHSRST Trigger: GGTGCTGCGTGAGTGTCTGCACACCTTCTGCAGGGA...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGATTTCGGATGGTGCCCTaGAGGCACTCCCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTAIHVGLGQYESHHRRFRMVP*RHSLQK Trigger: CTTCTGCAGGGAGTGCCTGCAGGGCACCATCCGAAA...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGGGTGCTTCGGTTCTCTaGGATGGACACACCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIEGASVL*DGHTQI Trigger: GATCTGGGTGTGTCCATCGCAGAGAACCGAAGCACC...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGAGTGGTAGCTCAAGGTaGTTCGGTTCTCTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPVPCLALLFTAIHVSGSSR*FGSLRW Trigger: CCATCGCAGAGAACCGAAGCACCTTGAGCTACCACT...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAAGAAGCACCAACCCCTaGAGTCGGGGGTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVGPQGASSGKIESLRALRSTNP*SRGSCS Trigger: ACTGCAAGACCCCCGACTGCAGGGGTTGGTGCTTCT...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGGAATGCAAGGTCTCCTaGTCTCGTGCCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIEECKVS*SRASLC Trigger: ACAGAGGCTGGCACGAGACCAGGAGACCTTGCATTC...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTGGGCACCCTCTGCTCTaGCAGCCAGGTGGCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KEEDAELNPMGCFLTYQSGHPLL*QPGGIL Trigger: AAGTATGCCACCTGGCTGGCAGAGCAGAGGGTGCCC...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCAGCTCCCTGCAATTCATGTaGTCATGGATGGCCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHEVWSARSNRGSANDISSLQFM*SWMALQ Trigger: CTGCAAGGCCATCCATGAGCACATGAATTGCAGGGA...GCTGATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGAAGCATCTCTGTCGTCTaGCGGGCAGCCACATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTAIHVGLGQYESHHRRSISVV*RAATSF Trigger: GAATGATGTGGCTGCCCGGCAGACGACAGAGATGCT...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGCCATGCATGGCCTCGCCCTaGTGCAGCATTACCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRENRVTQSTSQPGLRPCMASP*CSITFS Trigger: GCTAAAGGTAATGCTGCAGCAGGGCGAGGCCATGCA...TGGCCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGACAGCTTGGGTGGCATaGAATCCCATTGACCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLRENRVTQSTSQPGLRTAWVA*NPIDPA Trigger: TGCCGGGTCAATGGGATTCCATGCCACCCAAGCTGT...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGCAAATGGTGACGGTGTaGATGTACGCATCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AKDEAVVGPQGASSGKIEQMVTV*MYASST Trigger: TGTGGAGGATGCGTACATGCACACCGTCACCATTTG...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTTCCAACATTCGCAGTTaGCGCTGCCGCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEEDAELNPMGCFLTYQSSNIRS*RCRCSS Trigger: AGAGCTGCAGCGGCAGCGGCAACTGCGAATGTTGGA...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGAAGTGGTAGCTCAAGGTaGTTCGGTTCTCTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTAIHVGLGQYESHHRRSGSSR*FGSLRW Trigger: CCATCGCAGAGAACCGAAGCACCTTGAGCTACCACT...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCCGTCTTGGTACTCCCTaGAATTCATGTGCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGHEVWSARSNRGSANDIRLGTP*NSCAHG Trigger: TCCATGAGCACATGAATTGCAGGGAGTACCAAGACG...GATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACCTGATGTCCTGTGTTaGGGAGACCTCGGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VVGPQGASSGKIESLRALPDVLC*GDLGFY Trigger: GTAAAACCCGAGGTCTCCCCAACACAGGACATCAGG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGCCAAGGGCCAGGTCGTCTTaGTACTCCCTGCAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLRENRVTQSTSQPGLRPRARSS*YSLQFM Trigger: CATGAATTGCAGGGAGTACCAAGACGACCTGGCCCT...TGGCCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTATCCCTGCAATTCATGTaGTCATGGATGGCCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVGPQGASSGKIESLRALSLQFM*SWMALQ Trigger: CTGCAAGGCCATCCATGAGCACATGAATTGCAGGGA...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTAGCATCTCTGTCGTCTaGCGGGCAGCCACATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KEEDAELNPMGCFLTYQSSISVV*RAATSF Trigger: GAATGATGTGGCTGCCCGGCAGACGACAGAGATGCT...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCGCAGTTTTGACAGCTTaGGTGGCATGGAATCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CLALLFTAIHVGLGQYESAVLTA*VAWNPI Trigger: AATGGGATTCCATGCCACCCAAGCTGTCAAAACTGC...GCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAAAACCACTTTAATTCACTTAAAGAGGAGGATGCAGAGCTGAACCCCATGCCAACCACCCACTGCTaGAGGCTAGGTGGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WENHFNSLKEEDAELNPMPTTHC*RLGGKP Trigger: TGGCTTCCCACCTAGCCTGCAGCAGTGGGTGGTTGG...CATGGGGTTCAGCTCTGCATCCTCCTCTTTAAGTGAATTAAAGTGGTTTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACGTCTTGGTACTCCCTaGAATTCATGTGCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVGPQGASSGKIESLRALRLGTP*NSCAHG Trigger: TCCATGAGCACATGAATTGCAGGGAGTACCAAGACG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTAGGGCCAGGTCGTCTTaGTACTCCCTGCAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KEEDAELNPMGCFLTYQSRARSS*YSLQFM Trigger: CATGAATTGCAGGGAGTACCAAGACGACCTGGCCCT...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGAGGATGCAGAGCTGAACCCCATGGGCTGTTTCCTGACTTACCAATCTCAGCAGATCTCAGTGTaGCAGACTGTACAGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KEEDAELNPMGCFLTYQSQQISV*QTVQRI Trigger: GATCCGCTGTACAGTCTGCCACACTGAGATCTGCTG...AGATTGGTAAGTCAGGAAACAGCCCATGGGGTTCAGCTCTGCATCCTCCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGAGCAGTTTTGACAGCTTaGGTGGCATGGAATCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LFTAIHVGLGQYESHHRRAVLTA*VAWNPI Trigger: AATGGGATTCCATGCCACCCAAGCTGTCAAAACTGC...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAAAACCACTTTAATTCACTTAAAGAGGAGGATGCAGAGCTGAACCCCATGACAGCTTGGGTGGCATaGAATCCCATTGACCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WENHFNSLKEEDAELNPMTAWVA*NPIDPA Trigger: TGCCGGGTCAATGGGATTCCATGCCACCCAAGCTGT...CATGGGGTTCAGCTCTGCATCCTCCTCTTTAAGTGAATTAAAGTGGTTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAAAACCACTTTAATTCACTTAAAGAGGAGGATGCAGAGCTGAACCCCATGCCTGATGTCCTGTGTTaGGGAGACCTCGGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WENHFNSLKEEDAELNPMPDVLC*GDLGFY Trigger: GTAAAACCCGAGGTCTCCCCAACACAGGACATCAGG...CATGGGGTTCAGCTCTGCATCCTCCTCTTTAAGTGAATTAAAGTGGTTTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAAAACCACTTTAATTCACTTAAAGAGGAGGATGCAGAGCTGAACCCCATGCAAATGGTGACGGTGTaGATGTACGCATCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WENHFNSLKEEDAELNPMQMVTV*MYASST Trigger: TGTGGAGGATGCGTACATGCACACCGTCACCATTTG...CATGGGGTTCAGCTCTGCATCCTCCTCTTTAAGTGAATTAAAGTGGTTTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS CCA 90 bp | CCCACCGGTGGTGACTCCGGTGCTGCATCTGGCTGTCCCGGCTCCTaGTTGGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PTGGDSGAASGCPGS*LVLGFGRTGSKGPR Trigger: ACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCACCGGAGTCACCACCGGTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS CCA 90 bp | CCGGTGGTGACTCCGGTGCTGCATCTGGCTGTCCCGGCTCCTGGTTaGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PVVTPVLHLAVPAPG*SWASEGQVPRAPVT Trigger: AGTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCACCGGAGTCACCACCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS CCA 90 bp | GTGACTCCGGTGCTGCATCTGGCTGTCCCGGCTCCTGGTTGGTCCTaGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTGACTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTPVLHLAVPAPGWS*ASEGQVPRAPVTEG Trigger: CCCTTCAGTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCACCGGAGTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS TCA 90 bp | GGACAGGAGCGCCCGGATCTCTCTCTCCAGCAGCTTGCCGGGGCATaGGTAGGTGCTGTCAATGAAGGGGCAAGCCACCTCCGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQERPDLSLQQLAGA*VGAVNEGASHLRLL Trigger: CAGGAGGCGGAGGTGGCTTGCCCCTTCATTGACAGCACCTACTCATGCCCCGGCAAGCTGCTGGAGAGAGAGATCCGGGCGCTCCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS TCA 90 bp | GTGCAGACACTCACGCAGCACCACGGCCTCGCCGGGTGCCAGCACTaGGTAGCACACAGGGCACTCAGTAGGTTCGGTGTTCAGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQTLTQHHGLAGCQH*VAHRALSRFGVQHQ Trigger: CTGGTGCTGAACACCGAACCTACTGAGTGCCCTGTGTGCTACTCAGTGCTGGCACCCGGCGAGGCCGTGGTGCTGCGTGAGTGTCTGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
||
| CDS TCA 90 bp | TCTCTCTCTCCAGCAGCTTGCCGGGGCATGAGTAGGTGCTGTCAATaGAGGGGCAAGCCACCTCCGCCTCCTGGCTGTTTCGGATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSPAACRGMSRCCQ*RGKPPPPPGCFGWC Trigger: GCACCATCCGAAACAGCCAGGAGGCGGAGGTGGCTTGCCCCTTCATTGACAGCACCTACTCATGCCCCGGCAAGCTGCTGGAGAGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
||
| CDS CCA 90 bp | GCACCGTCTCCATTCCGCCGAATGCCGTGTGAATGCAAGGTCTCCTaGTCTCGTGCCAGCCTCTGTCCAACCACCCACTGCTGCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: APSPFRRMPCECKVS*SRASLCPTTHCCRL Trigger: TAGCCTGCAGCAGTGGGTGGTTGGACAGAGGCTGGCACGAGACCAGGAGACCTTGCATTCACACGGCATTCGGCGGAATGGAGACGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS GCA 90 bp | GGGCTGACAGCAGGTAGAGATAGGCACCGTCTCCATTCCGCCGAATaGCGTGTGAATGCAAGGTCTCCTGGTCTCGTGCCAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLTAGRDRHRLHSAE*RVNARSPGLVPASV Trigger: GACAGAGGCTGGCACGAGACCAGGAGACCTTGCATTCACACGGCATTCGGCGGAATGGAGACGGTGCCTATCTCTACCTGCTGTCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCATGAGGTCTGGTCAGCCAGAAGCAACAGAGGCAGTGCGAATGACATCTGGCATGGAATCCCATaGACCCGGCAGCGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGHEVWSARSNRGSANDIWHGIP*TRQRQP Trigger: TGGCTGCCGCTGCCGGGTCAATGGGATTCCATGCCA...GATGTCATTCGCACTGCCTCTGTTGCTTCTGGCTGACCAGACCTCATGGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS TCA 90 bp | CAGCAGGTAGAGATAGGCACCGTCTCCATTCCGCCGAATGCCGTGTaGATGCAAGGTCTCCTGGTCTCGTGCCAGCCTCTGTCCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QQVEIGTVSIPPNAV*MQGLLVSCQPLSNH Trigger: GTGGTTGGACAGAGGCTGGCACGAGACCAGGAGACCTTGCATTCACACGGCATTCGGCGGAATGGAGACGGTGCCTATCTCTACCTGCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS TCA 90 bp | CTTCCAACATTCGCAGTTGCCGCTGCCGCTGCAGCTCTTGTGGGTTaGGTGACGTGTTGCGGGCTGACAGCAGGTAGAGATAGGCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPTFAVAAAAAALVG*VTCCGLTAGRDRHR Trigger: ACGGTGCCTATCTCTACCTGCTGTCAGCCCGCAACACGTCACTCAACCCACAAGAGCTGCAGCGGCAGCGGCAACTGCGAATGTTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS GCA 90 bp | CCAGGTGGCATACTTGATAGCAGCCTGTTCATCTCCGCCAGCCACTaGCCGGGCAAGGCTCAGGGCCATCTCCTCTGCTTTCTTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGGILDSSLFISASH*PGKAQGHLLCFLGL Trigger: AAGACCAAGAAAGCAGAGGAGATGGCCCTGAGCCTTGCCCGGGCAGTGGCTGGCGGAGATGAACAGGCTGCTATCAAGTATGCCACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS GCA 90 bp | GCAGTCGGGGGTCTTGCAGTGGTAGCTCAAGGTGCTTCGGTTCTCTaGGATGGACACACCCAGATCCAGGAAACGCTGGTAGTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVGGLAVVAQGASVL*DGHTQIQETLVVLR Trigger: CCTGAGGACTACCAGCGTTTCCTGGATCTGGGTGTGTCCATCGCAGAGAACCGAAGCACCTTGAGCTACCACTGCAAGACCCCCGACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
||
| CDS GCA 90 bp | AGCACCAACCCCTGCAGTCGGGGGTCTTGCAGTGGTAGCTCAAGGTaGTTCGGTTCTCTGCGATGGACACACCCAGATCCAGGAAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: STNPCSRGSCSGSSR*FGSLRWTHPDPGNA Trigger: AGCGTTTCCTGGATCTGGGTGTGTCCATCGCAGAGAACCGAAGCACCTTGAGCTACCACTGCAAGACCCCCGACTGCAGGGGTTGGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
||
| CDS CCA 90 bp | GTCTCGTGCCAGCCTCTGTCCAACCACCCACTGCTGCAGGCTAGGTaGGAAGCCATAGTCCAGGAATACCATGTCCTTAAGGGAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSCQPLSNHPLLQAR*EAIVQEYHVLKGGH Trigger: GTGGCCTCCCTTAAGGACATGGTATTCCTGGACTATGGCTTCCCACCTAGCCTGCAGCAGTGGGTGGTTGGACAGAGGCTGGCACGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATTCCAACATTCGCAGTaGCCGCTGCCGCTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARQRMRLWWVLREQAQGKFQHSQ*PLPLQL Trigger: GAGCTGCAGCGGCAGCGGCAACTGCGAATGTTGGAA...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGTTGCAGAGCAGGCAGTaGACACGGGTGCACACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPARQRMRLWWVLREQAQLQSRQ*TRVHTG Trigger: TCCTGTGTGCACCCGTGTCAACTGCCTGCTCTGCAA...CTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGCTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGCCCCAGCGTGGGCCCTaGGTGACCCAGCAGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKLRENRVTQSTSQPGLRPQRGP*VTQQIS Trigger: TGAGATCTGCTGGGTCACCAAGGGCCCACGCTGGGG...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACCCCAGCGTGGGCCCTaGGTGACCCAGCAGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VVGPQGASSGKIESLRALPQRGP*VTQQIS Trigger: TGAGATCTGCTGGGTCACCAAGGGCCCACGCTGGGG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTGGCATGGAATCCCATaGACCCGGCAGCGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AKDEAVVGPQGASSGKIEWHGIP*TRQRQP Trigger: TGGCTGCCGCTGCCGGGTCAATGGGATTCCATGCCA...CTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS TCA 90 bp | CTGGTTGGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTaGCTGAAGGGTGAGGTCCTTGAAGCCCAAATCTTCCAACATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVGPGLRKDRFQGPP*LKGEVLEAQIFQHS Trigger: CGAATGTTGGAAGATTTGGGCTTCAAGGACCTCACCCTTCAGTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS GCA 90 bp | AACGCTGGTAGTCCTCAGGGGACAGGAGCTGCACATACACAGCTTTaGTGCTGGGGTTCAGGACACCCAGCAGATGCCCTCCTCCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: NAGSPQGTGAAHTQL*CWGSGHPADALLLS Trigger: TGATAGGAGGAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGTGTATGTGCAGCTCCTGTCCCCTGAGGACTACCAGCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
||
| CDS TCA 90 bp | TTGGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTGACTaGAGGGTGAGGTCCTTGAAGCCCAAATCTTCCAACATTCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLGFGRTGSKGPRD*RVRSLKPKSSNIRS Trigger: ACTGCGAATGTTGGAAGATTTGGGCTTCAAGGACCTCACCCTTCAGTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS GCA 90 bp | GCTGGTAGTCCTCAGGGGACAGGAGCTGCACATACACAGCTTTGCTaGTGGGGTTCAGGACACCCAGCAGATGCCCTCCTCCTATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AGSPQGTGAAHTQLC*WGSGHPADALLLSN Trigger: ATTTGATAGGAGGAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGTGTATGTGCAGCTCCTGTCCCCTGAGGACTACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
||
| CDS CCA 90 bp | GGTAGTCCTCAGGGGACAGGAGCTGCACATACACAGCTTTGCTGCTaGGGTTCAGGACACCCAGCAGATGCCCTCCTCCTATCAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSPQGTGAAHTQLCC*GSGHPADALLLSNG Trigger: ACCATTTGATAGGAGGAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGTGTATGTGCAGCTCCTGTCCCCTGAGGACTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGCAGCTCTTGTGGGTaGAGTGACGTGTTGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLPSPAVHCYTCGAGSVCSSCG*SDVLRA Trigger: AGCCCGCAACACGTCACTCAACCCACAAGAGCTGCA...TACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGTTCCAACATTCGCAGTaGCCGCTGCCGCTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKLRENRVTQSTSQPGLRFQHSQ*PLPLQL Trigger: GAGCTGCAGCGGCAGCGGCAACTGCGAATGTTGGAA...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGCCAGGCCGTGTGGGTTaGTTGATGAAAGTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQTRPVPCLALLFTAIHVPGRVG*LMKVQP Trigger: TGGCTGCACTTTCATCAACAAACCCACACGGCCTGG...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGCCCTGCTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCTTGCAGAGCAGGCAGTaGACACGGGTGCACACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLALLFTAIHVGLGQYESLQSRQ*TRVHTG Trigger: TCCTGTGTGCACCCGTGTCAACTGCCTGCTCTGCAA...GCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAGCAGGGCTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATGCTCATGGATGGCCTaGCAGAGCAGGCAGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ARQRMRLWWVLREQAQGKCSWMA*QSRQLT Trigger: TGTCAACTGCCTGCTCTGCAAGGCCATCCATGAGCA...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAAACCAGGCCAGTCCCTTGCCTAGCCCTGCTGTTCACTGCTATACATGTGCAGGGCCAGGTCGTCTaGGTACTCCCTGCAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQTRPVPCLALLFTAIHVQGQVV*VLPAIH Trigger: ATGAATTGCAGGGAGTACCAAGACGACCTGGCCCTG...CACATGTATAGCAGTGAACAGCAGGGCTAGGCAAGGGACTGGCCTGGTTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS TCA 90 bp | ATTACCTTTAGCATCTCTGTCGTCTGCCGGGCAGCCACATCATTCTaGGCCCGCAGGGCCAGGTCGTCTTGGTACTCCCTGCAATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ITFSISVVCRAATSF*ARRARSSWYSLQFM Trigger: CATGAATTGCAGGGAGTACCAAGACGACCTGGCCCTGCGGGCTCAGAATGATGTGGCTGCCCGGCAGACGACAGAGATGCTAAAGGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGTGCAGCTCTTGTGGGTaGAGTGACGTGTTGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKLRENRVTQSTSQPGLRCSSCG*SDVLRA Trigger: AGCCCGCAACACGTCACTCAACCCACAAGAGCTGCA...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTAGCCAGCCAGGCCTTAGGGGCCGTGTGGGTTTGTaGATGAAAGTGCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLRENRVTQSTSQPGLRGRVGL*MKVQPG Trigger: CCCTGGCTGCACTTTCATCAACAAACCCACACGGCC...CCTAAGGCCTGGCTGGCTAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGACCAGGCCGTGTGGGTTaGTTGATGAAAGTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFTAIHVGLGQYESHHRRPGRVG*LMKVQP Trigger: TGGCTGCACTTTCATCAACAAACCCACACGGCCTGG...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGATGCTCATGGATGGCCTaGCAGAGCAGGCAGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LFTAIHVGLGQYESHHRRCSWMA*QSRQLT Trigger: TGTCAACTGCCTGCTCTGCAAGGCCATCCATGAGCA...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAATAGAGTCACTCAGAGCACTACAGGGCCAGGTCGTCTaGGTACTCCCTGCAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VVGPQGASSGKIESLRALQGQVV*VLPAIH Trigger: ATGAATTGCAGGGAGTACCAAGACGACCTGGCCCTG...TAGTGCTCTGAGTGACTCTATTTTCCCTGAGCTTGCTCCCTGAGGACCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCAAAGGATGAGGCTGTGGTGGGTCCTCAGGGAGCAAGCTCAGGGAAAAGGACAGGTGAACTCGTaGACATCATCCTCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARQRMRLWWVLREQAQGKGQVNS*TSSSKK Trigger: CTTCTTTGAGGATGATGTCAACGAGTTCACCTGTCC...TTTTCCCTGAGCTTGCTCCCTGAGGACCCACCACAGCCTCATCCTTTGCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS GCA 90 bp | TGCACATACACAGCTTTGCTGCTGGGGTTCAGGACACCCAGCAGATaGCCTCCTCCTATCAAATGGTCCCAGGAAACCAAGCACTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CTYTALLLGFRTPSR*PPPIKWSQETKHFN Trigger: ATTGAAGTGCTTGGTTTCCTGGGACCATTTGATAGGAGGAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGTGTATGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTCACTGCTATACATGTGGGGCTGGGTCAGTATGAGAGCCACCATCGTCGAGGACAGGTGAACTCGTaGACATCATCCTCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFTAIHVGLGQYESHHRRGQVNS*TSSSKK Trigger: CTTCTTTGAGGATGATGTCAACGAGTTCACCTGTCC...TCGACGATGGTGGCTCTCATACTGACCCAGCCCCACATGTATAGCAGTGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
||
| CDS CAA 90 bp | ACCGGTGGTGACTCCGGTGCTGCATCTGGCTGTCCCGGCTCCTGGTaGGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGGDSGAASGCPGSW*VLGFGRTGSKGPRD Trigger: GTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCACCGGAGTCACCACCGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CCA 72 bp | GTGCTGCATCTGGCTGTCCCGGCTCCTGGTTGGTCCTaGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: VLHLAVPAPGWS*ASEGQVPRAPV Trigger: CACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | GGCAAGCCACCTCCGCCTCCTGGCTGTTTCGGATGGTaGCCTGCAGGCACTCCCTGCAGAAGGTGTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GKPPPPPGCFGW*PAGTPCRRCAD Trigger: GTCTGCACACCTTCTGCAGGGAGTGCCTGCAGGGCACCATCCGAAACAGCCAGGAGGCGGAGGTGGCTTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS CCA 72 bp | ACTCCGGTGCTGCATCTGGCTGTCCCGGCTCCTGGTTaGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TPVLHLAVPAPG*SWASEGQVPRA Trigger: GGCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCACCGGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CAA 72 bp | GACTCCGGTGCTGCATCTGGCTGTCCCGGCTCCTGGTaGGTCCTGGGCTTCGGAAGGACAGGTTCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSGAASGCPGSW*VLGFGRTGSKG Trigger: GCCCTTGGAACCTGTCCTTCCGAAGCCCAGGACCAACCAGGAGCCGGGACAGCCAGATGCAGCACCGGAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CAA 90 bp | TGCACCCTGAGGGGCACCCTCTGCTCTGCCAGCCAGGTGGCATACTaGATAGCAGCCTGTTCATCTCCGCCAGCCACTGCCCGGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: CTLRGTLCSASQVAY*IAACSSPPATARAR Trigger: CCTTGCCCGGGCAGTGGCTGGCGGAGATGAACAGGCTGCTATCAAGTATGCCACCTGGCTGGCAGAGCAGAGGGTGCCCCTCAGGGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS TCA 72 bp | CCAGCAGCTTGCCGGGGCATGAGTAGGTGCTGTCAATaGAGGGGCAAGCCACCTCCGCCTCCTGGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PAACRGMSRCCQ*RGKPPPPPGCF Trigger: GAAACAGCCAGGAGGCGGAGGTGGCTTGCCCCTTCATTGACAGCACCTACTCATGCCCCGGCAAGCTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS TCA 72 bp | GGCAGTTTTGACAGCTTGGGTGGCATGGAATCCCATTaGCCCGGCAGCGGCAGCCACCACTGGTGTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSFDSLGGMESH*PGSGSHHWCPL Trigger: CAGGGGACACCAGTGGTGGCTGCCGCTGCCGGGTCAATGGGATTCCATGCCACCCAAGCTGTCAAAACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CAA 72 bp | AGGGGCACCCTCTGCTCTGCCAGCCAGGTGGCATACTaGATAGCAGCCTGTTCATCTCCGCCAGCCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: RGTLCSASQVAY*IAACSSPPATA Trigger: GGCAGTGGCTGGCGGAGATGAACAGGCTGCTATCAAGTATGCCACCTGGCTGGCAGAGCAGAGGGTGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | CGTGTGGGTTTGTTGATGAAAGTGCAGCCAGGGCACTaGCAGCCCACCGGTGGTGACTCCGGTGCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: RVGLLMKVQPGH*QPTGGDSGAAS Trigger: AGATGCAGCACCGGAGTCACCACCGGTGGGCTGGCAGTGCCCTGGCTGCACTTTCATCAACAAACCCACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | CCTCAGGGGACAGGAGCTGCACATACACAGCTTTGCTaGTGGGGTTCAGGACACCCAGCAGATGCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PQGTGAAHTQLC*WGSGHPADALL Trigger: GAGGAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGTGTATGTGCAGCTCCTGTCCCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
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| CDS CCA 72 bp | CCATTCCGCCGAATGCCGTGTGAATGCAAGGTCTCCTaGTCTCGTGCCAGCCTCTGTCCAACCACCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: PFRRMPCECKVS*SRASLCPTTHC Trigger: GCAGTGGGTGGTTGGACAGAGGCTGGCACGAGACCAGGAGACCTTGCATTCACACGGCATTCGGCGGAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CCA 72 bp | ACAGCCGTCCTTCTTCTGCACCACAATCCGGCACTGTaGGCAGTGCATGGCCTCGCCCTGCTGCAGCATTAC | + |
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Preference number: 6 (lower is better) Translates to: TAVLLLHHNPAL*AVHGLALLQHY Trigger: GTAATGCTGCAGCAGGGCGAGGCCATGCACTGCCCACAGTGCCGGATTGTGGTGCAGAAGAAGGACGGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS TCA 72 bp | GAGATAGGCACCGTCTCCATTCCGCCGAATGCCGTGTaGATGCAAGGTCTCCTGGTCTCGTGCCAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: EIGTVSIPPNAV*MQGLLVSCQPL Trigger: CAGAGGCTGGCACGAGACCAGGAGACCTTGCATTCACACGGCATTCGGCGGAATGGAGACGGTGCCTATCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS TCA 72 bp | TTCGCAGTTGCCGCTGCCGCTGCAGCTCTTGTGGGTTaGGTGACGTGTTGCGGGCTGACAGCAGGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: FAVAAAAAALVG*VTCCGLTAGRD Trigger: ATCTCTACCTGCTGTCAGCCCGCAACACGTCACTCAACCCACAAGAGCTGCAGCGGCAGCGGCAACTGCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS TCA 72 bp | CCTGGGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTaGCTGAAGGGTGAGGTCCTTGAAGCCCAAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGLRKDRFQGPP*LKGEVLEAQIF Trigger: GAAGATTTGGGCTTCAAGGACCTCACCCTTCAGTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | ACCTCGGGTTTTACTTGCACCCTGAGGGGCACCCTCTaGTCTGCCAGCCAGGTGGCATACTTGATAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSGFTCTLRGTL*SASQVAYLIAA Trigger: GGCTGCTATCAAGTATGCCACCTGGCTGGCAGAGCAGAGGGTGCCCCTCAGGGTGCAAGTAAAACCCGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | CCCTGCAGTCGGGGGTCTTGCAGTGGTAGCTCAAGGTaGTTCGGTTCTCTGCGATGGACACACCCAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: PCSRGSCSGSSR*FGSLRWTHPDP Trigger: TGGATCTGGGTGTGTCCATCGCAGAGAACCGAAGCACCTTGAGCTACCACTGCAAGACCCCCGACTGCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS GCA 72 bp | AGTCCTCAGGGGACAGGAGCTGCACATACACAGCTTTaGTGCTGGGGTTCAGGACACCCAGCAGATGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SPQGTGAAHTQL*CWGSGHPADAL Trigger: GAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGTGTATGTGCAGCTCCTGTCCCCTGAGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
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| CDS CAA 90 bp | CAGAGCAGGCAGTTGACACGGGTGCACACAGGACAGGTGAACTCGTaGACATCATCCTCAAAGAAGCACCAACCCCTGCAGTCGGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: QSRQLTRVHTGQVNS*TSSSKKHQPLQSGV Trigger: GACCCCCGACTGCAGGGGTTGGTGCTTCTTTGAGGATGATGTCAACGAGTTCACCTGTCCTGTGTGCACCCGTGTCAACTGCCTGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS TCA 72 bp | GGCTTCGGAAGGACAGGTTCCAAGGGCCCCCGTGACTaGAGGGTGAGGTCCTTGAAGCCCAAATCTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GFGRTGSKGPRD*RVRSLKPKSSN Trigger: GTTGGAAGATTTGGGCTTCAAGGACCTCACCCTTCAGTCACGGGGGCCCTTGGAACCTGTCCTTCCGAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | ATACTTGATAGCAGCCTGTTCATCTCCGCCAGCCACTaGCCGGGCAAGGCTCAGGGCCATCTCCTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ILDSSLFISASH*PGKAQGHLLCF Trigger: AAAGCAGAGGAGATGGCCCTGAGCCTTGCCCGGGCAGTGGCTGGCGGAGATGAACAGGCTGCTATCAAGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | GCAGGTAGAGATAGGCACCGTCTCCATTCCGCCGAATaGCGTGTGAATGCAAGGTCTCCTGGTCTCGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: AGRDRHRLHSAE*RVNARSPGLVP Trigger: TGGCACGAGACCAGGAGACCTTGCATTCACACGGCATTCGGCGGAATGGAGACGGTGCCTATCTCTACCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | CCCAAATCTTCCAACATTCGCAGTTGCCGCTGCCGCTaGAGCTCTTGTGGGTTGAGTGACGTGTTGCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PKSSNIRSCRCR*SSCGLSDVLRA Trigger: AGCCCGCAACACGTCACTCAACCCACAAGAGCTGCAGCGGCAGCGGCAACTGCGAATGTTGGAAGATTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | TCTGAGCCCGCAGGGCCAGGTCGTCTTGGTACTCCCTaGAATTCATGTGCTCATGGATGGCCTTGCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SEPAGPGRLGTP*NSCAHGWPCRA Trigger: TGCTCTGCAAGGCCATCCATGAGCACATGAATTGCAGGGAGTACCAAGACGACCTGGCCCTGCGGGCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CAA 72 bp | GCTGGTATGAAGCAGGTATCTGGTAGGTCTCAGGCCTaGCACGACAGCACATCTCACACCCAGGCCGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AGMKQVSGRSQA*HDSTSHTQAVW Trigger: CCACACGGCCTGGGTGTGAGATGTGCTGTCGTGCAAGGCCTGAGACCTACCAGATACCTGCTTCATACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS GCA 72 bp | ACAGCTTTGCTGCTGGGGTTCAGGACACCCAGCAGATaGCCTCCTCCTATCAAATGGTCCCAGGAAACCAAG | + |
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Preference number: 6 (lower is better) Translates to: TALLLGFRTPSR*PPPIKWSQETK Trigger: CTTGGTTTCCTGGGACCATTTGATAGGAGGAGGGCATCTGCTGGGTGTCCTGAACCCCAGCAGCAAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
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| CDS CCA 72 bp | CAGCCTCTGTCCAACCACCCACTGCTGCAGGCTAGGTaGGAAGCCATAGTCCAGGAATACCATGTCCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: QPLSNHPLLQAR*EAIVQEYHVLK Trigger: CTTAAGGACATGGTATTCCTGGACTATGGCTTCCCACCTAGCCTGCAGCAGTGGGTGGTTGGACAGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CCA 72 bp | TGCAGTGGTAGCTCAAGGTGCTTCGGTTCTCTGCGATaGACACACCCAGATCCAGGAAACGCTGGTAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSGSSRCFGSLR*THPDPGNAGSP Trigger: AGGACTACCAGCGTTTCCTGGATCTGGGTGTGTCCATCGCAGAGAACCGAAGCACCTTGAGCTACCACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS CCA 72 bp | AGGTCGTCTTGGTACTCCCTGCAATTCATGTGCTCATaGATGGCCTTGCAGAGCAGGCAGTTGACACGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSSWYSLQFMCS*MALQSRQLTRV Trigger: CACCCGTGTCAACTGCCTGCTCTGCAAGGCCATCCATGAGCACATGAATTGCAGGGAGTACCAAGACGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 |
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| CDS CAA 72 bp | TTCATGTGCTCATGGATGGCCTTGCAGAGCAGGCAGTaGACACGGGTGCACACAGGACAGGTGAACTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FMCSWMALQSRQ*TRVHTGQVNSL Trigger: CAACGAGTTCACCTGTCCTGTGTGCACCCGTGTCAACTGCCTGCTCTGCAAGGCCATCCATGAGCACATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS CAA 72 bp | CAGTTGACACGGGTGCACACAGGACAGGTGAACTCGTaGACATCATCCTCAAAGAAGCACCAACCCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QLTRVHTGQVNS*TSSSKKHQPLQ Trigger: CTGCAGGGGTTGGTGCTTCTTTGAGGATGATGTCAACGAGTTCACCTGTCCTGTGTGCACCCGTGTCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028964.14 ENSMUST00000109847.9 ENSMUST00000144865.2 |
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| CDS CCA 72 bp | TTCAGGACACCCAGCAGATGCCCTCCTCCTATCAAATaGTCCCAGGAAACCAAGCACTTCAATCCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FRTPSRCPPPIK*SQETKHFNPVP Trigger: TGGGACAGGATTGAAGTGCTTGGTTTCCTGGGACCATTTGATAGGAGGAGGGCATCTGCTGGGTGTCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144865.2 |
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