Pregenerated sensors for RBBP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031353Ensembl transcript IDs: ENSMUST00000033720.12, ENSMUST00000112326.8, ENSMUST00000112327.8, ENSMUST00000138791.2, ENSMUST00000143681.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATCATATGGTGGTTTATAAAACAAGTGAGCCTGTTGAGCCATCTTaGAGGCTCAGAAAAGGTTTCTTTAAACTGCTTCCACCCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: DHMVVYKTSEPVEPS*RLRKGFFKLLPPYK Trigger: TTTGTAGGGTGGAAGCAGTTTAAAGAAACCTTTTCTGAGCCTGCAAGATGGCTCAACAGGCTCACTTGTTTTATAAACCACCATATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143681.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACTCATACTTTGGGTTTAAGATCCTTGCCCCTCCAGTTCCGATGCCGTGACAATTTTGTGCATGGTTaGGGAGTTGGTTCTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TTHTLGLRSLPLQFRCRDNFVHG*GVGSFL Trigger: GAGGAAAGAACCAACTCCCCAACCATGCACAAAATT...GTCACGGCATCGGAACTGGAGGGGCAAGGATCTTAAACCCAAAGTATGAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143681.2 |
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| 3UTR CAA 90 bp | TTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTaGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: LSPNSYNMIQYATAH*KVLESEGKECQKPS Trigger: GGACGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTATACAATGCCTTTTTaGCGCTTGACAAATCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ATAHLKVLESEGKECQKPYTMPF*RLTNQA Trigger: TGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATA...CGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR-3UTR CCA 90 bp | TACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGTATACAATGCCTTTTTaGCGCTTGACAAATCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: YATAHLKVLESEGKECQKYTMPF*RLTNQA Trigger: TGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATA...CTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR CAA 90 bp | TGCCAGAAGCCGTCCCACTTACATTTCCTACTATACAATGCCTTTTaGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCAATA | + |
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Preference number: 2 (lower is better) Translates to: CQKPSHLHFLLYNAF*ALDKSSIHVAIHSI Trigger: TATTGAATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAGTAGGAAATGTAAGTGGGACGGCTTCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAATGCCTTTTTGGCGCTTaGCAAATCAAGCATTCATGT | + |
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Preference number: 2 (lower is better) Translates to: FLSPNSYNMIQYATAHLKCLFGA*QIKHSC Trigger: ACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCA...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR TCA 72 bp | GTTGCTCATGTGGCTCATACAAATCTATATATACTATaGGAGATGGGAGCATGCACACCCACCCACCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: VAHVAHTNLYIL*EMGACTPTHPS Trigger: GGAAGGGTGGGTGGGTGTGCATGCTCCCATCTCTCATAGTATATATAGATTTGTATGAGCCACATGAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| 3UTR CCA 72 bp | ATGTGGCTCATACAAATCTATATATACTATGAGAGATaGGAGCATGCACACCCACCCACCCTTCCACATCTT | + |
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Preference number: 3 (lower is better) Translates to: MWLIQIYIYYER*EHAHPPTLPHL Trigger: AAGATGTGGAAGGGTGGGTGGGTGTGCATGCTCCCATCTCTCATAGTATATATAGATTTGTATGAGCCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| 3UTR-3UTR CAA 90 bp | TACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCTATACAATGCCTTTTaGGCGCTTGACAAATCAAGC | + |
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Preference number: 3 (lower is better) Translates to: YATAHLKVLESEGKECQKLYNAF*ALDKSS Trigger: GCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG...CTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR-3UTR CAA 90 bp | AAGATCCCAGCTGACAGTGCAATGTCAATTGATATAGTGCATGTGTTTTATTATAAACAAGTGAGCCTGTaGAGCCATCTTGCAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: KIPADSAMSIDIVHVFYYKQVSL*SHLAGS Trigger: TGAGCCTGCAAGATGGCTCAACAGGCTCACTTGTTT...ATAATAAAACACATGCACTATATCAATTGACATTGCACTGTCAGCTGGGATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143681.2 |
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| 3UTR-3UTR CAA 90 bp | TCCGTTCTTAAGCAACATTCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTaGAAAGTGCTAGAATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVLKQHSFLSPNSYNMIQYATAH*KVLESE Trigger: CTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA...CTGTATCATATTGTAGCTATTAGGGGATAAAAAGGAATGTTGCTTAAGAACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAACTATACAATGCCTTTTaGGCGCTTGACAAATCAAGC | + |
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Preference number: 3 (lower is better) Translates to: FLSPNSYNMIQYATAHLKLYNAF*ALDKSS Trigger: GCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | ATCTATATATACTATGAGAGATGGGAGCATGCACACCCACCCACCCTTCCACATGCTGTAGGGATTGAATaGGAGGCAGTTGACCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: IYIYYERWEHAHPPTLPHAVGIE*EAVDLS Trigger: GCTGAGGTCAACTGCCTCTCATTCAATCCCTACAGC...ATGTGGAAGGGTGGGTGGGTGTGCATGCTCCCATCTCTCATAGTATATATAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR TCA 90 bp | CAGTACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGTGCTCATCAGATGTATaGGTGCCCAGCACTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QYATAHLKVLESEGKECQCSSDV*VPSTSQ Trigger: TTGGCTAGTGCTGGGCACTCATACATCTGATGAGCA...CTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | TTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATGACTCATGCAGCAGATaGCAGGCCACATCCTCTACA | + |
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Preference number: 4 (lower is better) Translates to: LKVLESEGKECQKPSHLHDSCSR*QATSST Trigger: TGTAGAGGATGTGGCCTGGCATCTGCTGCATGAGTC...ATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | GCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCATCATTGGGAATATaGACTCGAGCAACCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: ATAHLKVLESEGKECQKPSSLGI*TRATTR Trigger: TCTGGTGGTTGCTCGAGTTCATATTCCCAATGATGA...CGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | CAGTACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGATCCTCTACAACAGCTaGGTGGCCAGTAAAGATTGC | + |
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Preference number: 4 (lower is better) Translates to: QYATAHLKVLESEGKECQILYNS*VASKDC Trigger: GCAATCTTTACTGGCCACTCAGCTGTTGTAGAGGAT...CTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGACTTCAGGAAGCCACTaGACGGTAAGACTGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLTSGSH*TVRLGH Trigger: GTGGCCCAGTCTTACCGTTCAGTGGCTTCCTGAAGT...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGATCCTCTACAACAGCTaGGTGGCCAGTAAAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: YATAHLKVLESEGKECQKILYNS*VASKDC Trigger: GCAATCTTTACTGGCCACTCAGCTGTTGTAGAGGAT...CTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | ATCTATATATACTATGAGAGATGGGAGCATGCACACCCACCCACCCTTCCACATCATCAGATGTATGAGTaGCCAGCACTAGCCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: IYIYYERWEHAHPPTLPHHQMYE*PALANE Trigger: TTCATTGGCTAGTGCTGGGCACTCATACATCTGATG...ATGTGGAAGGGTGGGTGGGTGTGCATGCTCCCATCTCTCATAGTATATATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR GCA 90 bp | TACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGGCCTTCCTTTGGTCCTaGATTTATATCCCACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YATAHLKVLESEGKECQKAFLWS*IYIPQA Trigger: TGCCTGTGGGATATAAATGCAGGACCAAAGGAAGGC...CTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGGCTGTAGGGATTGAATaGGAGGCAGTTGACCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLAVGIE*EAVDLS Trigger: GCTGAGGTCAACTGCCTCTCATTCAATCCCTACAGC...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | CAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATTTCCTACTATACAATGAGCTACAGTCTTATCTaGAGAGCCAGTTGCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: QRVKNARSRPTYISYYTMSYSLI*RASCQN Trigger: ATTCTGGCAACTGGCTCTGCAGATAAGACTGTAGCT...CATTGTATAGTAGGAAATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | CAGTACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGTTATGTGGAGACCAGTaGACCTGGAAAATTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: QYATAHLKVLESEGKECQLCGDQ*TWKISS Trigger: GGATGAAATTTTCCAGGTCCACTGGTCTCCACATAA...CTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | ATCATATGGTGGTTTATAAAACAAGTGAGCCTGTTGAGCCATCTTGCAGGCTCAAATAAACAGGAGCTCTaGAGGCCCATCTTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: IIWWFIKQVSLLSHLAGSNKQEL*RPIFCI Trigger: GATGCAGAAGATGGGCCTCCAGAGCTCCTGTTTATT...TGAGCCTGCAAGATGGCTCAACAGGCTCACTTGTTTTATAAACCACCATATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143681.2 |
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| CDS-3UTR TCA 90 bp | TCCGTTCTTAAGCAACATTCCTTTTTATCCCCTAATAGCTACAATATGATACAGACTTCAGGAAGCCACTaGACGGTAAGACTGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SVLKQHSFLSPNSYNMIQTSGSH*TVRLGH Trigger: GTGGCCCAGTCTTACCGTTCAGTGGCTTCCTGAAGT...CTGTATCATATTGTAGCTATTAGGGGATAAAAAGGAATGTTGCTTAAGAACGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCGATGCCGTGACATCTaGCTCTTCATCATTGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: YATAHLKVLESEGKECQKRCRDI*LFIIVN Trigger: ATTTACAATGATGAAGAGTCAGATGTCACGGCATCG...CTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATCGATGCCGTGACATCTaGCTCTTCATCATTGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: LKVLESEGKECQKPSHLHRCRDI*LFIIVN Trigger: ATTTACAATGATGAAGAGTCAGATGTCACGGCATCG...ATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | CTATACAATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTGCTCATCAGATGTATaGGTGCCCAGCACTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LYNAFLALDKSSIHVAIHCSSDV*VPSTSQ Trigger: TTGGCTAGTGCTGGGCACTCATACATCTGATGAGCA...ATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGGCCTTCCTTTGGTCCTaGATTTATATCCCACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLAFLWS*IYIPQA Trigger: TGCCTGTGGGATATAAATGCAGGACCAAAGGAAGGC...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATTTCCTACTATACAATGAATAGTTTCATTATGTaGAGACCAGTGGACCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QRVKNARSRPTYISYYTMNSFIM*RPVDLE Trigger: TTCCAGGTCCACTGGTCTCCACATAATGAAACTATT...CATTGTATAGTAGGAAATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGGTGTTTTTGTGGCAATaGTGTGAGGATTCTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLVFLWQ*CEDSVA Trigger: TGCCACAGAATCCTCACATCATTGCCACAAAAACAC...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | ATAAAACAAGTGAGCCTGTTGAGCCATCTTGCAGGCTCAGAAAAGGTTTCTTTATCTGCCATATCTGCATaGTGTTATCTTCAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: IKQVSLLSHLAGSEKVSLSAISA*CYLQTQ Trigger: CTGTGTCTGAAGATAACATCATGCAGATATGGCAGA...TAAAGAAACCTTTTCTGAGCCTGCAAGATGGCTCAACAGGCTCACTTGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143681.2 |
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| CDS-3UTR GCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGGATGCACTCAGGAGATaGCCACTCAGATTAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLDALRR*PLRLEF Trigger: GAATTCTAATCTGAGTGGGCATCTCCTGAGTGCATC...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | CTATACAATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATCGAGCAACCACCAGATaGTTCTGCTCATCAGATGTA | + |
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Preference number: 4 (lower is better) Translates to: LYNAFLALDKSSIHVAIHRATTR*FCSSDV Trigger: TACATCTGATGAGCAGAACCATCTGGTGGTTGCTCG...ATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TCCGTTCTTAAGCAACATTCCTTTTTATCCCCTAATAGCTACAATATGATACAGCACAGGCAGACAGTATaGTCATCAGATGCACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLKQHSFLSPNSYNMIQHRQTV*SSDALR Trigger: CCTGAGTGCATCTGATGACCATACTGTCTGCCTGTG...CTGTATCATATTGTAGCTATTAGGGGATAAAAAGGAATGTTGCTTAAGAACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | AATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCAATACACAGGCAGACAGTATaGTCATCAGATGCACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NAFLALDKSSIHVAIHSIHRQTV*SSDALR Trigger: CCTGAGTGCATCTGATGACCATACTGTCTGCCTGTG...TATTGAATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGTCTGCCATATCTGCATaGTGTTATCTTCAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLSAISA*CYLQTQ Trigger: CTGTGTCTGAAGATAACATCATGCAGATATGGCAGA...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | CTATACAATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATCATCAGATGTATGAGTaGCCAGCACTAGCCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: LYNAFLALDKSSIHVAIHHQMYE*PALANE Trigger: TTCATTGGCTAGTGCTGGGCACTCATACATCTGATG...ATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | ATGATGAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATAGTATGGTCATCAGATaGACTCAGGAGATGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: MMKLTASVYYSLVAHVAHSMVIR*TQEMPT Trigger: AGTGGGCATCTCCTGAGTGCATCTGATGACCATACT...ATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTCATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR GCA 90 bp | TACGCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGATATTTTCAGCCATCTaGCATATCTGCATGATGTTA | + |
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Preference number: 4 (lower is better) Translates to: YATAHLKVLESEGKECQKIFSAI*HICMML Trigger: TAACATCATGCAGATATGGCAGATGGCTGAAAATAT...CTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAACGAGCAACCACCAGATaGTTCTGCTCATCAGATGTA | + |
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Preference number: 4 (lower is better) Translates to: FLSPNSYNMIQYATAHLKRATTR*FCSSDV Trigger: TACATCTGATGAGCAGAACCATCTGGTGGTTGCTCG...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGGATGTGAGGATTCTGTaGCATATAACGAGCACGATT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLDVRIL*HITSTI Trigger: AATCGTGCTCGTTATATGCCACAGAATCCTCACATC...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATCAAAACATCAGAAGATaGTGTTTTTGTGGCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKVLESEGKECQKPSHLHQNIRR*CFCGND Trigger: ATCATTGCCACAAAAACACCATCTTCTGATGTTTTG...ATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGATTACATTCTCCACTTaGATCTGGTTTTGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSPNSYNMIQYATAHLITFST*IWFCRV Trigger: CACCCTGCAAAACCAGATCCAAGTGGAGAATGTAAT...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | AATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCAATATGTGCATCCACCAAATaGCTCGGCTTAGAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NAFLALDKSSIHVAIHSICASTK*LGLEVV Trigger: TACCACTTCTAAGCCGAGCCATTTGGTGGATGCACA...TATTGAATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAATGTGCATCCACCAAATaGCTCGGCTTAGAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLSPNSYNMIQYATAHLKCASTK*LGLEVV Trigger: TACCACTTCTAAGCCGAGCCATTTGGTGGATGCACA...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | GAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATACAAAAATAAACAGGAGCTCTaGAGGCCCATCTTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: EINSFCVLFFGCSCGSYKNKQEL*RPIFCI Trigger: GATGCAGAAGATGGGCCTCCAGAGCTCCTGTTTATT...TTTGTATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CCA 90 bp | AGTTATCCTCGCATATTTGGGAACTTGAGCAAGCACTTTAAAAGTTTGAGAAAAAATAAACAGGAGCTCTaGAGGCCCATCTTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SYPRIFGNLSKHFKSLRKNKQEL*RPIFCI Trigger: GATGCAGAAGATGGGCCTCCAGAGCTCCTGTTTATT...TTTTCTCAAACTTTTAAAGTGCTTGCTCAAGTTCCCAAATATGCGAGGATAACT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| 3UTR CAA 72 bp | AATAGCTACAATATGATACAGTACGCAACAGCTCACTaGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSYNMIQYATAH*KVLESEGKECQ Trigger: CTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAAGTGTTTTTGTGGCAATaGTGTGAGGATTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSPNSYNMIQYATAHLKVFLWQ*CEDSVA Trigger: TGCCACAGAATCCTCACATCATTGCCACAAAAACAC...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAAGATGCACTCAGGAGATaGCCACTCAGATTAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSPNSYNMIQYATAHLKDALRR*PLRLEF Trigger: GAATTCTAATCTGAGTGGGCATCTCCTGAGTGCATC...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAAAGCTACAGTCTTATCTaGAGAGCCAGTTGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPNSYNMIQYATAHLKSYSLI*RASCQN Trigger: ATTCTGGCAACTGGCTCTGCAGATAAGACTGTAGCT...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | AATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCAATATTGTCACTGTCACAGTaGGAAGCATCAAACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NAFLALDKSSIHVAIHSILSLSQ*EASNCA Trigger: TGCACAGTTTGATGCTTCCCACTGTGACAGTGACAA...TATTGAATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TCCGTTCTTAAGCAACATTCCTTTTTATCCCCTAATAGCTACAATATGATACAGTTGTCACTGTCACAGTaGGAAGCATCAAACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKQHSFLSPNSYNMIQLSLSQ*EASNCA Trigger: TGCACAGTTTGATGCTTCCCACTGTGACAGTGACAA...CTGTATCATATTGTAGCTATTAGGGGATAAAAAGGAATGTTGCTTAAGAACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR TCA 90 bp | GAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATACAAATCTGCCATATCTGCATaGTGTTATCTTCAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EINSFCVLFFGCSCGSYKSAISA*CYLQTQ Trigger: CTGTGTCTGAAGATAACATCATGCAGATATGGCAGA...TTTGTATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CCA 90 bp | GAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATACAAAGATGTGAGGATTCTGTaGCATATAACGAGCACGATT | + |
|
Preference number: 4 (lower is better) Translates to: EINSFCVLFFGCSCGSYKDVRIL*HITSTI Trigger: AATCGTGCTCGTTATATGCCACAGAATCCTCACATC...TTTGTATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CCA 90 bp | TTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGAAAATTACATTCTCCACTTaGATCTGGTTTTGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPNSYNMIQYATAHLKITFST*IWFCRV Trigger: CACCCTGCAAAACCAGATCCAAGTGGAGAATGTAAT...TTTCAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | CTATACAATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCTACAACAGCTGAGTaGCCAGTAAAGATTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYNAFLALDKSSIHVAIHSTTAE*PVKIAL Trigger: TAAAGCAATCTTTACTGGCCACTCAGCTGTTGTAGA...ATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TGTAAAAGTTATCCTCGCATATTTGGGAACTTGAGCAAGCACTTTAAAAGTTTGTTATGTGGAGACCAGTaGACCTGGAAAATTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CKSYPRIFGNLSKHFKSLLCGDQ*TWKISS Trigger: GGATGAAATTTTCCAGGTCCACTGGTCTCCACATAA...CAAACTTTTAAAGTGCTTGCTCAAGTTCCCAAATATGCGAGGATAACTTTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | CTATACAATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATGTGGCCAGTAAAGATTaGTTTAGCATCCACAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYNAFLALDKSSIHVAIHVASKD*FSIHNF Trigger: AAAATTGTGGATGCTAAAGCAATCTTTACTGGCCAC...ATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TCCGTTCTTAAGCAACATTCCTTTTTATCCCCTAATAGCTACAATATGATACAGACTGTGCATCATCATTaGGAATATGAACTCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKQHSFLSPNSYNMIQTVHHH*EYELEQ Trigger: TTGCTCGAGTTCATATTCCCAATGATGATGCACAGT...CTGTATCATATTGTAGCTATTAGGGGATAAAAAGGAATGTTGCTTAAGAACGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | ATGATGAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATTCTACAACAGCTGAGTaGCCAGTAAAGATTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MMKLTASVYYSLVAHVAHSTTAE*PVKIAL Trigger: TAAAGCAATCTTTACTGGCCACTCAGCTGTTGTAGA...ATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTCATCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CCA 90 bp | AGTTATCCTCGCATATTTGGGAACTTGAGCAAGCACTTTAAAAGTTTGAGAAAAAATAGTTTCATTATGTaGAGACCAGTGGACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYPRIFGNLSKHFKSLRKNSFIM*RPVDLE Trigger: TTCCAGGTCCACTGGTCTCCACATAATGAAACTATT...TTTTCTCAAACTTTTAAAGTGCTTGCTCAAGTTCCCAAATATGCGAGGATAACT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR GCA 90 bp | AGTTATCCTCGCATATTTGGGAACTTGAGCAAGCACTTTAAAAGTTTGAGAAAAGTGGCCAGTAAAGATTaGTTTAGCATCCACAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYPRIFGNLSKHFKSLRKVASKD*FSIHNF Trigger: AAAATTGTGGATGCTAAAGCAATCTTTACTGGCCAC...TTTTCTCAAACTTTTAAAGTGCTTGCTCAAGTTCCCAAATATGCGAGGATAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | TCCGTTCTTAAGCAACATTCCTTTTTATCCCCTAATAGCTACAATATGATACAGCAAAACATCAGAAGATaGTGTTTTTGTGGCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLKQHSFLSPNSYNMIQQNIRR*CFCGND Trigger: ATCATTGCCACAAAAACACCATCTTCTGATGTTTTG...CTGTATCATATTGTAGCTATTAGGGGATAAAAAGGAATGTTGCTTAAGAACGGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | AATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCAATATGCGATTCAAAGGTGTaGAGTTTTAGTTTCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: NAFLALDKSSIHVAIHSICDSKV*SFSFRL Trigger: TAATCTGAAACTAAAACTCCACACCTTTGAATCGCA...TATTGAATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CCA 90 bp | AGTTATCCTCGCATATTTGGGAACTTGAGCAAGCACTTTAAAAGTTTGAGAAAATGCGATTCAAAGGTGTaGAGTTTTAGTTTCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SYPRIFGNLSKHFKSLRKCDSKV*SFSFRL Trigger: TAATCTGAAACTAAAACTCCACACCTTTGAATCGCA...TTTTCTCAAACTTTTAAAGTGCTTGCTCAAGTTCCCAAATATGCGAGGATAACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS GCA 90 bp | GAACTCGAGCAACCACCAGATGGTTCTGCTCATCAGATGTATGAGTaGCCAGCACTAGCCAATGAAGGGCATAATCCTTTCCTTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELEQPPDGSAHQMYE*PALANEGHNPFLLV Trigger: AACCAGAAGGAAAGGATTATGCCCTTCATTGGCTAGTGCTGGGCACTCATACATCTGATGAGCAGAACCATCTGGTGGTTGCTCGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033720.12 ENSMUST00000112326.8 ENSMUST00000112327.8 ENSMUST00000138791.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATCCACCGAATTCTCCCTaGTCACTGTCACAGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKVLESEGKECQKPSHLHPPNSP*SLSQWE Trigger: TTCCCACTGTGACAGTGACAAGGGAGAATTCGGTGG...ATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CAA 90 bp | GCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGGGCTTAGAAGTGGTATaGGATCTGGTGTCCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: ATAHLKVLESEGKECQKPGLEVV*DLVSHI Trigger: GATATGGGACACCAGATCCAATACCACTTCTAAGCC...CGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CAA 90 bp | GCAACAGCTCACTTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTTAGCATCCACAATTTaGCCTTCCTTTGGTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATAHLKVLESEGKECQKPLASTI*PSFGPA Trigger: TGCAGGACCAAAGGAAGGCAAAATTGTGGATGCTAA...CGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAAGTGAGCTGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTGCTAGAATCAGAGGGTAAAGAATGCCAGAAGCCGTCCCACTTACATGGCTTAGAAGTGGTATaGGATCTGGTGTCCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: LKVLESEGKECQKPSHLHGLEVV*DLVSHI Trigger: GATATGGGACACCAGATCCAATACCACTTCTAAGCC...ATGTAAGTGGGACGGCTTCTGGCATTCTTTACCCTCTGATTCTAGCACTTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CAA 90 bp | ATCTATATATACTATGAGAGATGGGAGCATGCACACCCACCCACCCTTCCACATATTTTATACTCTTCGTaGATGACACGCTCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IYIYYERWEHAHPPTLPHILYSS*MTRSST Trigger: TGTGGAGGAGCGTGTCATCAACGAAGAGTATAAAAT...ATGTGGAAGGGTGGGTGGGTGTGCATGCTCCCATCTCTCATAGTATATATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CAA 90 bp | TCCTTTTTATCCCCTAATAGCTACAATATGATACAGTACGCAACAGCTCACTTGTTGAATGAGAGGCAGTaGACCTCAGCGGTGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLSPNSYNMIQYATAHLLNERQ*TSAVCA Trigger: TGCACACACCGCTGAGGTCAACTGCCTCTCATTCAA...CAAGTGAGCTGTTGCGTACTGTATCATATTGTAGCTATTAGGGGATAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CAA 90 bp | GAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATACAAATTGAATGAGAGGCAGTaGACCTCAGCGGTGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EINSFCVLFFGCSCGSYKLNERQ*TSAVCA Trigger: TGCACACACCGCTGAGGTCAACTGCCTCTCATTCAA...TTTGTATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS-3UTR CAA 90 bp | AATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATTCAATATCAATTTTCCCTCCCTaGTCACTGTCACAGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NAFLALDKSSIHVAIHSISIFPP*SLSQWE Trigger: TTCCCACTGTGACAGTGACAAGGGAGGGAAAATTGA...TATTGAATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112327.8 |
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| CDS-3UTR CAA 90 bp | CTATACAATGCCTTTTTGGCGCTTGACAAATCAAGCATTCATGTAGCAATACATATTTTATACTCTTCGTaGATGACACGCTCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LYNAFLALDKSSIHVAIHILYSS*MTRSST Trigger: TGTGGAGGAGCGTGTCATCAACGAAGAGTATAAAAT...ATGTATTGCTACATGAATGCTTGATTTGTCAAGCGCCAAAAAGGCATTGTATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033720.12 ENSMUST00000112327.8 |
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| CDS-3UTR CAA 90 bp | ATGATGAAATTAACAGCTTCTGTGTATTATTCTTTGGTTGCTCATGTGGCTCATTTAGCATCCACAATTTaGCCTTCCTTTGGTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MMKLTASVYYSLVAHVAHLASTI*PSFGPA Trigger: TGCAGGACCAAAGGAAGGCAAAATTGTGGATGCTAA...ATGAGCCACATGAGCAACCAAAGAATAATACACAGAAGCTGTTAATTTCATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033720.12 |
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| CDS CCA 72 bp | AGGCAGTTGACCTCAGCGGTGTGTGCATCCACCAAATaGCTCGGCTTAGAAGTGGTATTGGATCTGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQLTSAVCASTK*LGLEVVLDLVS Trigger: GGACACCAGATCCAATACCACTTCTAAGCCGAGCCATTTGGTGGATGCACACACCGCTGAGGTCAACTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033720.12 ENSMUST00000112326.8 ENSMUST00000112327.8 |
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| CDS GCA 72 bp | TCAGCAACAGATCCAAACAAGGACTCATGCAGCAGATaGCAGGCCACATCCTCTACAACAGCTGAGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SATDPNKDSCSR*QATSSTTAEWP Trigger: TGGCCACTCAGCTGTTGTAGAGGATGTGGCCTGGCATCTGCTGCATGAGTCCTTGTTTGGATCTGTTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033720.12 ENSMUST00000112326.8 ENSMUST00000112327.8 |
||
| CDS GCA 72 bp | CAACCACCAGATGGTTCTGCTCATCAGATGTATGAGTaGCCAGCACTAGCCAATGAAGGGCATAATCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QPPDGSAHQMYE*PALANEGHNPF Trigger: GAAAGGATTATGCCCTTCATTGGCTAGTGCTGGGCACTCATACATCTGATGAGCAGAACCATCTGGTGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033720.12 ENSMUST00000112326.8 ENSMUST00000112327.8 ENSMUST00000138791.2 |
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| CDS CAA 90 bp | TCATACAGAAACGGTGTATTCTTCTTCCAGATTTTATACTCTTCGTaGATGACACGCTCCTCCACAGTATCTTCAAACACAAGCCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SYRNGVFFFQILYSS*MTRSSTVSSNTSHD Trigger: ATCGTGGCTTGTGTTTGAAGATACTGTGGAGGAGCGTGTCATCAACGAAGAGTATAAAATCTGGAAGAAGAATACACCGTTTCTGTATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138791.2 |
||
| CDS CAA 90 bp | TCATACAGAAACGGTGTATTCTTCTTCCAGATTTTATACTCTTCGTaGATGACACGCTCCTCCACAGTATCTTCAAACATCTCTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: SYRNGVFFFQILYSS*MTRSSTVSSNISLL Trigger: GAGTAAAGAGATGTTTGAAGATACTGTGGAGGAGCGTGTCATCAACGAAGAGTATAAAATCTGGAAGAAGAATACACCGTTTCTGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033720.12 ENSMUST00000112326.8 ENSMUST00000112327.8 |
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