Pregenerated sensors for RBBP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026439Ensembl transcript IDs: ENSMUST00000027700.15, ENSMUST00000187505.7, ENSMUST00000188575.7, ENSMUST00000189786.3, ENSMUST00000190825.7, ENSMUST00000190997.7
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AAGTCACTCGAGGACATGCATGGAGGACGGAAGGCAAGCAGGACATaGGAAATGACACGTCCAAAGATGGGACTCCAACAGTTAGGTGAA | + |
Preference number: 1 (lower is better) Translates to: KSLEDMHGGRKASRT*EMTRPKMGLQQLGE Trigger: TTCACCTAACTGTTGGAGTCCCATCTTTGGACGTGTCATTTCCCATGTCCTGCTTGCCTTCCGTCCTCCATGCATGTCCTCGAGTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CCA 90 bp | CCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTaGAAGCAGCACAGGAGCAACAGAACTAGAAACTTCCAGCGTGTC | + |
Preference number: 1 (lower is better) Translates to: PVSHLPITTIGLTHT*KQHRSNRTRNFQRV Trigger: GACACGCTGGAAGTTTCTAGTTCTGTTGCTCCTGTGCTGCTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR TCA 90 bp | GACAGGTTCTCCACAGGCAAGGATTTAAGGAACGAACCTCATCTTTaGTTTGAAGTGGGCTGCTGTTGCTTTGATTTGGGGGTGGAGGTC | + |
Preference number: 1 (lower is better) Translates to: DRFSTGKDLRNEPHL*FEVGCCCFDLGVEV Trigger: GACCTCCACCCCCAAATCAAAGCAACAGCAGCCCACTTCAAATCAAAGATGAGGTTCGTTCCTTAAATCCTTGCCTGTGGAGAACCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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3UTR GCA 90 bp | CCTTCCTTTCCTGCCAGTCTGAAATCTTTCGAGCACTTGCTTCTCTaGCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGA | + |
Preference number: 1 (lower is better) Translates to: PSFPASLKSFEHLLL*PTFIHNMELQEALG Trigger: TCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGATTTCAGACTGGCAGGAAAGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR GCA 90 bp | AAAGCCATGATTATTCAAACGGATCTAATACTGGAAAACATGCAATaGAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAA | + |
Preference number: 1 (lower is better) Translates to: KAMIIQTDLILENMQ*KGTPDSLEPSLLSK Trigger: TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTTTTCCAGTATTAGATCCGTTTGAATAATCATGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CCA 90 bp | TTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTaGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCAGT | + |
Preference number: 1 (lower is better) Translates to: FSAQPLYTIWSYRKH*EGKVMNERNRRCIS Trigger: ACTGATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CCA 90 bp | ACAGGTAAAGCGATACACAAACTACTGATGATTCTTAGCTGGAGATaGATAAAACTAATCATATCCAAAAGCCATGATTATTCAAACGGA | + |
Preference number: 1 (lower is better) Translates to: TGKAIHKLLMILSWR*IKLIISKSHDYSNG Trigger: TCCGTTTGAATAATCATGGCTTTTGGATATGATTAGTTTTATCCATCTCCAGCTAAGAATCATCAGTAGTTTGTGTATCGCTTTACCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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3UTR CCA 90 bp | GTCAACACAGGTAAAGCGATACACAAACTACTGATGATTCTTAGCTaGAGATGGATAAAACTAATCATATCCAAAAGCCATGATTATTCA | + |
Preference number: 1 (lower is better) Translates to: VNTGKAIHKLLMILS*RWIKLIISKSHDYS Trigger: TGAATAATCATGGCTTTTGGATATGATTAGTTTTATCCATCTCCAGCTAAGAATCATCAGTAGTTTGTGTATCGCTTTACCTGTGTTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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3UTR-3UTR CCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAACCTTCACCTCCTGGGTaGGAGGCAGAGGCCTTTGTT | + |
Preference number: 2 (lower is better) Translates to: CRLRASAFLRACLDFCLKPSPPG*EAEAFV Trigger: AACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGG...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCACTCCTTCACCTCCTaGGTGGGAGGCAGAGGCCTT | + |
Preference number: 2 (lower is better) Translates to: ESLFGLLLERKAGPCALLHSFTS*VGGRGL Trigger: AAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTG...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CAA 90 bp | CGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTaGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCCATAATTCACTT | + |
Preference number: 2 (lower is better) Translates to: RLRASAFLRACLDFC*KGRQGRVLFFHNSL Trigger: AAGTGAATTATGGAAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR TCA 90 bp | TCTACCACAGTACAATGTAATCAACGGGTTTGGCTGTCTGAAGGAGCCTCCACCGGGCTGCTGTTGCTTTaGTTTGGGGGTGGAGGTCTC | + |
Preference number: 2 (lower is better) Translates to: STTVQCNQRVWLSEGASTGLLLL*FGGGGL Trigger: GAGACCTCCACCCCCAAATCAAAGCAACAGCAGCCC...GGTGGAGGCTCCTTCAGACAGCCAAACCCGTTGATTACATTGTACTGTGGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR CCA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGCCTTCACCTCCTGGGTaGGAGGCAGAGGCCTTTGTT | + |
Preference number: 2 (lower is better) Translates to: HPVSHLPITTIGLTHTWKPSPPG*EAEAFV Trigger: AACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGG...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR CCA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAACCTTCACCTCCTGGGTaGGAGGCAGAGGCCTTTGTT | + |
Preference number: 2 (lower is better) Translates to: LCPTFIHNMELQEALGGEPSPPG*EAEAFV Trigger: AACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGG...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | GCCAGAGGCGTCACTAACCCTTCGCACACTTGGCTTCCTGACTTTGGATTTTCAGAAGTGGGCTGCTGTTaGTTTGATTTGGGGGTGGAG | + |
Preference number: 2 (lower is better) Translates to: ARGVTNPSHTWLPDFGFSEVGCC*FDLGVE Trigger: CTCCACCCCCAAATCAAAGCAACAGCAGCCCACTTC...TGAAAATCCAAAGTCAGGAAGCCAAGTGTGCGAAGGGTTAGTGACGCCTCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR CCA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGCACTCCTTCACCTCCTaGGTGGGAGGCAGAGGCCTT | + |
Preference number: 2 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWHSFTS*VGGRGL Trigger: AAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTG...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR TCA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAACCTTTCCTGCCAGTCTaGAATCTTTCGAGCACTTGC | + |
Preference number: 2 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKPFLPV*NLSSTC Trigger: GCAAGTGCTCGAAAGATTTCAGACTGGCAGGAAAGG...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | AGGGAAGGCAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACACTGGAAAACATGCAATaGAAGGGAACCCCTGATTCT | + |
Preference number: 2 (lower is better) Translates to: REGRNPCISLHTTAVCCTLENMQ*KGTPDS Trigger: AGAATCAGGGGTTCCCTTGCATTGCATGTTTTCCAG...TGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTGCCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR GCA 90 bp | TCAGCTTGCACACCACTGCAGTGTGCTGTACAGAGACATGACATGGAGGTAATGGAAGGCAGGGCCGTGTaGTCTTCTTCCATAATTCAC | + |
Preference number: 2 (lower is better) Translates to: SACTPLQCAVQRHDMEVMEGRAV*SSSIIH Trigger: GTGAATTATGGAAGAAGAGCACACGGCCCTGCCTTC...CATTACCTCCATGTCATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR TCA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAACTCCAACAGTTAGGTaGACAAAACACGGGCACTCT | + |
Preference number: 2 (lower is better) Translates to: LCPTFIHNMELQEALGGETPTVR*TKHGHS Trigger: AGAGTGCCCGTGTTTTGTTCACCTAACTGTTGGAGT...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCCTGTTTGGACTTCTaGTTGAAAGGAAGGCAGGGC | + |
Preference number: 2 (lower is better) Translates to: ALASLPNLYTQYGATGSTACLDF*LKGRQG Trigger: GCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGC...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTAAGTCACTCGAGGACATaGATGGAGGACGGAAGGCAA | + |
Preference number: 2 (lower is better) Translates to: PNLYTQYGATGSTGRGKLSHSRT*MEDGRQ Trigger: TTGCCTTCCGTCCTCCATGCATGTCCTCGAGTGACT...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CCA 90 bp | GTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGCAGCACAAGGCAAGCAGGACATaGGAAATGACACGTCCAAAG | + |
Preference number: 2 (lower is better) Translates to: VSHLPITTIGLTHTWKQHKASRT*EMTRPK Trigger: CTTTGGACGTGTCATTTCCCATGTCCTGCTTGCCTT...GTGCTGCTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR TCA 90 bp | GCATTAGCATCCAGATGGAGGGAAATCAAGCCACTTCACACAGGGAAGGCAGAATGCTGTACAGAGACATaGCATGGAGGTAATGTCTAC | + |
Preference number: 2 (lower is better) Translates to: ALASRWREIKPLHTGKAECCTET*HGGNVY Trigger: GTAGACATTACCTCCATGTCATGTCTCTGTACAGCA...TTCTGCCTTCCCTGTGTGAAGTGGCTTGATTTCCCTCCATCTGGATGCTAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR GCA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAAGAAAGAAACAGAAGATaGATCAGTCTTCCTAGGTGC | + |
Preference number: 2 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKERNRR*ISLPRC Trigger: GCACCTAGGAAGACTGATGCATCTTCTGTTTCTTTC...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CCA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGAAGGCAAGCAGGACATaGGAAATGACACGTCCAAAG | + |
Preference number: 2 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEKASRT*EMTRPK Trigger: CTTTGGACGTGTCATTTCCCATGTCCTGCTTGCCTT...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR TCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGTACCTGATGACAGAGTaGGAAGAACCAAGGGTTCCA | + |
Preference number: 2 (lower is better) Translates to: HLLLCPTFIHNMELQEALYLMTE*EEPRVP Trigger: TGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTA...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR TCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTTACCTGATGACAGAGTaGGAAGAACCAAGGGTTCCA | + |
Preference number: 2 (lower is better) Translates to: ALASLPNLYTQYGATGSTYLMTE*EEPRVP Trigger: TGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTA...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR TCA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGGCACACTTGGCTTCCTaGCTTTGGATTTTCAGAAAA | + |
Preference number: 2 (lower is better) Translates to: HPVSHLPITTIGLTHTWKAHLAS*LWIFRK Trigger: TTTTCTGAAAATCCAAAGTCAGGAAGCCAAGTGTGC...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR GCA 90 bp | TCTTTCGAGCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGGCAGGGCCGTGTaGTCTTCTTCCATAATTCAC | + |
Preference number: 2 (lower is better) Translates to: SFEHLLLCPTFIHNMELQEGRAV*SSSIIH Trigger: GTGAATTATGGAAGAAGAGCACACGGCCCTGCCTTC...CTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | TACAGGAAGCACTGGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCAGTCACTCGAGGACATaGATGGAGGACGGAAGGCAA | + |
Preference number: 2 (lower is better) Translates to: YRKHWEGKVMNERNRRCISHSRT*MEDGRQ Trigger: TTGCCTTCCGTCCTCCATGCATGTCCTCGAGTGACT...GATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGGAAAGAAACAGAAGATaGATCAGTCTTCCTAGGTGC | + |
Preference number: 2 (lower is better) Translates to: HPVSHLPITTIGLTHTWKERNRR*ISLPRC Trigger: GCACCTAGGAAGACTGATGCATCTTCTGTTTCTTTC...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR TCA 90 bp | TCTTTCGAGCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGACTCCAACAGTTAGGTaGACAAAACACGGGCACTCT | + |
Preference number: 2 (lower is better) Translates to: SFEHLLLCPTFIHNMELQTPTVR*TKHGHS Trigger: AGAGTGCCCGTGTTTTGTTCACCTAACTGTTGGAGT...CTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR GCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTGAGCACTTGCTTCTCTaGCCAACCTTTATACACAAT | + |
Preference number: 2 (lower is better) Translates to: KRTANAERAKVRKRRVKAEHLLL*PTFIHN Trigger: ATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTC...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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3UTR CCA 72 bp | TCTTCACCAGCAACACAACCTGGTGTGAAGTTGAAGTaGGTCAAGCCTCCTGCCGTCTTCGCGCATCCGCGT | + |
Preference number: 3 (lower is better) Translates to: SSPATQPGVKLK*VKPPAVFAHPR Trigger: ACGCGGATGCGCGAAGACGGCAGGAGGCTTGACCCACTTCAACTTCACACCAGGTTGTGTTGCTGGTGAAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR GCA 72 bp | CTTCACACAGGGAAGGCAGAAACCCCTGCATCAGCTTaGACACCACTGCAGTGTGCTGTACAGAGACATGAC | + |
Preference number: 3 (lower is better) Translates to: LHTGKAETPASA*TPLQCAVQRHD Trigger: GTCATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTGCCTTCCCTGTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR GCA 72 bp | AATCAAGCCACTTCACACAGGGAAGGCAGAAACCCCTaGATCAGCTTGCACACCACTGCAGTGTGCTGTACA | + |
Preference number: 3 (lower is better) Translates to: NQATSHREGRNP*ISLHTTAVCCT Trigger: TGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTGCCTTCCCTGTGTGAAGTGGCTTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR CCA 72 bp | AACAAAACACGGGCACTCTTCACCAGCAACACAACCTaGTGTGAAGTTGAAGTGGGTCAAGCCTCCTGCCGT | + |
Preference number: 3 (lower is better) Translates to: NKTRALFTSNTT*CEVEVGQASCR Trigger: ACGGCAGGAGGCTTGACCCACTTCAACTTCACACCAGGTTGTGTTGCTGGTGAAGAGTGCCCGTGTTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CAA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAAGGGAGGCAGAGGCCTTaGTTTTCAACTAAAGCCAAT | + |
Preference number: 3 (lower is better) Translates to: CRLRASAFLRACLDFCLKGRQRP*FSTKAN Trigger: ATTGGCTTTAGTTGAAAACAAAGGCCTCTGCCTCCC...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CAA 90 bp | CAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACAGAGACATGTGCTGTTGCTTTGATTaGGGGGTGGAGGTCTCTCAT | + |
Preference number: 3 (lower is better) Translates to: QKPLHQLAHHCSVLYRDMCCCFD*GVEVSH Trigger: ATGAGAGACCTCCACCCCCAAATCAAAGCAACAGCA...CATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR CAA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGTGTTTGGACTTCTGCTaGAAAGGAAGGCAGGGCCGT | + |
Preference number: 3 (lower is better) Translates to: CFSAQPLYTIWSYRKHWECLDFC*KGRQGR Trigger: ACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACA...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR TCA 72 bp | TCTAATACTGGAAAACATGCAATGCAAGGGAACCCCTaGTTCTCTAGAGCCCAGCCTCCTGAGCAAAGGGCA | + |
Preference number: 3 (lower is better) Translates to: SNTGKHAMQGNP*FSRAQPPEQRA Trigger: TGCCCTTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTTTTCCAGTATTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CAA 90 bp | GTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGCAGCACGGGAGGCAGAGGCCTTaGTTTTCAACTAAAGCCAAT | + |
Preference number: 3 (lower is better) Translates to: VSHLPITTIGLTHTWKQHGRQRP*FSTKAN Trigger: ATTGGCTTTAGTTGAAAACAAAGGCCTCTGCCTCCC...GTGCTGCTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR-3UTR CAA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAGGGAGGCAGAGGCCTTaGTTTTCAACTAAAGCCAAT | + |
Preference number: 3 (lower is better) Translates to: LCPTFIHNMELQEALGGEGRQRP*FSTKAN Trigger: ATTGGCTTTAGTTGAAAACAAAGGCCTCTGCCTCCC...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
3UTR-3UTR CAA 90 bp | TGGAAATGGGACACAGCATTAGCATCCAGATGGAGGGAAATCAAGCCACTTCACTTCCTGAGAGCCTGTTaGGACTTCTGCTTGAAAGGA | + |
Preference number: 3 (lower is better) Translates to: WKWDTALASRWREIKPLHFLRAC*DFCLKG Trigger: TCCTTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAA...GTGAAGTGGCTTGATTTCCCTCCATCTGGATGCTAATGCTGTGTCCCATTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
||
3UTR-3UTR CAA 90 bp | GTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGCAGCACAACCTCATCTTTGATTaGAAGTGGGCTGCTGTTGCT | + |
Preference number: 3 (lower is better) Translates to: VSHLPITTIGLTHTWKQHNLIFD*KWAAVA Trigger: AGCAACAGCAGCCCACTTCAAATCAAAGATGAGGTT...GTGCTGCTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
||
3UTR GCA 72 bp | GCAAATTTTCAGAAAAGAACAAGTCACTCGAGGACATaGATGGAGGACGGAAGGCAAGCAGGACATGGGAAA | + |
Preference number: 3 (lower is better) Translates to: ANFQKRTSHSRT*MEDGRQAGHGK Trigger: TTTCCCATGTCCTGCTTGCCTTCCGTCCTCCATGCATGTCCTCGAGTGACTTGTTCTTTTCTGAAAATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
3UTR CCA 72 bp | AGCACTTGCTTCTCTGCCCAACCTTTATACACAATATaGAGCTACAGGAAGCACTGGGAGGGGAAAGTTATG | + |
Preference number: 3 (lower is better) Translates to: STCFSAQPLYTI*SYRKHWEGKVM Trigger: CATAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
3UTR TCA 72 bp | AGGGTAAAAGCTAAGCAACCTTTCACAGAAAGGAAGTaGGTGAAGACAGTAATGGGGCGTAGCTCCAGGAAA | + |
Preference number: 3 (lower is better) Translates to: RVKAKQPFTERK*VKTVMGRSSRK Trigger: TTTCCTGGAGCTACGCCCCATTACTGTCTTCACTCACTTCCTTTCTGTGAAAGGTTGCTTAGCTTTTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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3UTR GCA 72 bp | CCTGCCAGTCTGAAATCTTTCGAGCACTTGCTTCTCTaGCCAACCTTTATACACAATATGGAGCTACAGGAA | + |
Preference number: 3 (lower is better) Translates to: PASLKSFEHLLL*PTFIHNMELQE Trigger: TTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGATTTCAGACTGGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
3UTR GCA 72 bp | ATTATTCAAACGGATCTAATACTGGAAAACATGCAATaGAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTC | + |
Preference number: 3 (lower is better) Translates to: IIQTDLILENMQ*KGTPDSLEPSL Trigger: GAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTTTTCCAGTATTAGATCCGTTTGAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR-3UTR CAA 90 bp | TGGAAATGGGACACAGCATTAGCATCCAGATGGAGGGAAATCAAGCCACTTCACCTTGGCTTCCTGACTTaGGATTTTCAGAAAATTTCA | + |
Preference number: 3 (lower is better) Translates to: WKWDTALASRWREIKPLHLGFLT*DFQKIS Trigger: TGAAATTTTCTGAAAATCCAAAGTCAGGAAGCCAAG...GTGAAGTGGCTTGATTTCCCTCCATCTGGATGCTAATGCTGTGTCCCATTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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3UTR TCA 72 bp | GACATGGAGGTAATGTCTACAAATAAAAACATCCCGTaGGCCACTTACCAATCACAACCATTGGTCTCACTC | + |
Preference number: 3 (lower is better) Translates to: DMEVMSTNKNIP*ATYQSQPLVSL Trigger: GAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATGTTTTTATTTGTAGACATTACCTCCATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
||
3UTR CCA 72 bp | CAACCTTTATACACAATATGGAGCTACAGGAAGCACTaGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGA | + |
Preference number: 3 (lower is better) Translates to: QPLYTIWSYRKH*EGKVMNERNRR Trigger: TCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CCA 72 bp | GGTAAAGCGATACACAAACTACTGATGATTCTTAGCTaGAGATGGATAAAACTAATCATATCCAAAAGCCAT | + |
Preference number: 3 (lower is better) Translates to: GKAIHKLLMILS*RWIKLIISKSH Trigger: ATGGCTTTTGGATATGATTAGTTTTATCCATCTCCAGCTAAGAATCATCAGTAGTTTGTGTATCGCTTTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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3UTR CCA 72 bp | GCGATACACAAACTACTGATGATTCTTAGCTGGAGATaGATAAAACTAATCATATCCAAAAGCCATGATTAT | + |
Preference number: 3 (lower is better) Translates to: AIHKLLMILSWR*IKLIISKSHDY Trigger: ATAATCATGGCTTTTGGATATGATTAGTTTTATCCATCTCCAGCTAAGAATCATCAGTAGTTTGTGTATCGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
||
CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCCCTCCTGCCAAGGACTaGCTGAGTTCCGCCTGCACT | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVPPAKD*LSSACT Trigger: AGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGGAGG...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 |
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CDS-3UTR CCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCCTCCTGCCAAGGACTaGCTGAGTTCCGCCTGCACT | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLPPAKD*LSSACT Trigger: AGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGGAGG...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 |
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CDS-3UTR TCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCCTGCCAAGGACTGGCTaGGTTCCGCCTGCACTTTAC | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVLPRTG*VPPALY Trigger: GTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAG...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCAGGTCAGGGCCATGCTaGTGCAGTCCAGAGTCCCAT | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVRSGPC*CSPESH Trigger: ATGGGACTCTGGACTGCATCAGCATGGCCCTGACCT...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CAA 72 bp | GCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTaGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCCAT | + |
Preference number: 4 (lower is better) Translates to: ASAFLRACLDFC*KGRQGRVLFFH Trigger: ATGGAAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAATGGGATCCACGCTGGTaGCATCCACTTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKWDPRW*HPLPHL Trigger: AAGATGAGGAAGTGGATGTCACCAGCGTGGATCCCA...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAACTGGGATCCATCTGCTaGAGACTGCCTCTTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKLGSIC*RLPLLL Trigger: GAGAAGAAGAGGCAGTCTTCAGCAGATGGATCCCAG...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGCTCCTCCTGCTTTTaGTCCTTTAGGCCGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKGSSCF*SFRPAC Trigger: GCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGCC...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCATCCATCAAGGAGCTTaGGACTGCATCCGGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVIHQGA*DCIRWR Trigger: CCTCCACCGGATGCAGTCCCAAGCTCCTTGATGGAT...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCCTGGGATCCATCTGCTaGAGACTGCCTCTTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVLGSIC*RLPLLL Trigger: GAGAAGAAGAGGCAGTCTTCAGCAGATGGATCCCAG...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCTGGGATCCATCTGCTaGAGACTGCCTCTTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLLGSIC*RLPLLL Trigger: GAGAAGAAGAGGCAGTCTTCAGCAGATGGATCCCAG...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTATGGGACTGCATCCGGTaGAGGGCCATACGGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLWDCIR*RAIRVF Trigger: GAAAACCCGTATGGCCCTCCACCGGATGCAGTCCCA...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAAATCCATCAAGGAGCTTaGGACTGCATCCGGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKIHQGA*DCIRWR Trigger: CCTCCACCGGATGCAGTCCCAAGCTCCTTGATGGAT...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCACAGCAGTTCTGAGATaGCTCCTCCTGCCAAGGACT | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVTAVLR*LLLPRT Trigger: AGTCCTTGGCAGGAGGAGCCATCTCAGAACTGCTGT...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 |
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CDS-3UTR TCA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAATGGGATCCACGCTGGTaGCATCCACTTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKWDPRW*HPLPHL Trigger: AAGATGAGGAAGTGGATGTCACCAGCGTGGATCCCA...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAATTTCTCTTTACCTTTTaGTCCTTTAGGCCGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKFLFTF*SFRPAC Trigger: GCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAA...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVLGRPA*FFLDLP Trigger: TGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAA...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLLGRPA*FFLDLP Trigger: TGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAA...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AGGGAAGGCAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACATCCTTTAGGCCGGCCTaGTTGCTTCTTCTTGGATTT | + |
Preference number: 4 (lower is better) Translates to: REGRNPCISLHTTAVCCTSFRPA*LLLLGF Trigger: AAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGA...TGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTGCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCGCAGGAGTTCCCCTCTaGTCCCATGTAAGATCTTCA | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVAGVPL*SHVRSS Trigger: TGAAGATCTTACATGGGACCAGAGGGGAACTCCTGC...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AGGGAAGGCAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACAACAGCAGTTCTGAGATaGCTCCTCCTGCTTTTGATC | + |
Preference number: 4 (lower is better) Translates to: REGRNPCISLHTTAVCCTTAVLR*LLLLLI Trigger: GATCAAAAGCAGGAGGAGCCATCTCAGAACTGCTGT...TGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTGCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTCCTGCTGCCAAGGACTaGCTGAGTTCCGCCTGCACT | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTPAAKD*LSSACT Trigger: AGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGCAGG...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGTGGGATCCACGCTGGTaGCATCCACTTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: HPVSHLPITTIGLTHTWKWDPRW*HPLPHL Trigger: AAGATGAGGAAGTGGATGTCACCAGCGTGGATCCCA...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR TCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTTTTCTCTTTACCTTTTaGTCCTTTAGGCCGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLFLFTF*SFRPAC Trigger: GCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAA...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTACTGCCAAGGACTGGCTaGGTTCCGCCTGCACTTTAC | + |
Preference number: 4 (lower is better) Translates to: PNLYTQYGATGSTGRGKLLPRTG*VPPALY Trigger: GTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAG...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | TCTACCACAGTACAATGTAATCAACGGGTTTGGCTGTCTGAAGGAGCCTCCACCAAGTCCTGCAGCTTCTaGATAGGCTCTGGCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: STTVQCNQRVWLSEGASTKSCSF*IGSGSP Trigger: TGGAGAGCCAGAGCCTATGCAGAAGCTGCAGGACTT...GGTGGAGGCTCCTTCAGACAGCCAAACCCGTTGATTACATTGTACTGTGGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR GCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGAAGTCCTGCAGCTTCTaGATAGGCTCTGGCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKKSCSF*IGSGSP Trigger: TGGAGAGCCAGAGCCTATGCAGAAGCTGCAGGACTT...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAAAGTCCTGCAGCTTCTaGATAGGCTCTGGCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLKSCSF*IGSGSP Trigger: TGGAGAGCCAGAGCCTATGCAGAAGCTGCAGGACTT...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCTATTCACCAAGTCCTaGAGCTTCTGCATAGGCTCT | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLLFTKS*SFCIGS Trigger: AGAGCCTATGCAGAAGCTGCAGGACTTGGTGAATAG...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTTCCTTTAGGCCGGCCTaGTTGCTTCTTCTTGGATTT | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLSFRPA*LLLLGF Trigger: AAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGA...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAATGGCTGAGTTCCGCCTaGACTTTACCCTTCGTTGAT | + |
Preference number: 4 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKWLSSA*TLPFVD Trigger: ATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCA...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
CDS-3UTR CCA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAACTTCTGCATAGGCTCTaGCTCTCCATCCCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: LCPTFIHNMELQEALGGELLHRL*LSIPST Trigger: TGTGGAAGGGATGGAGAGCCAGAGCCTATGCAGAAG...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTACTTCTGCATAGGCTCTaGCTCTCCATCCCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLLLHRL*LSIPST Trigger: TGTGGAAGGGATGGAGAGCCAGAGCCTATGCAGAAG...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTATGGGACTGCATCCGGTaGAGGGCCATACGGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: PNLYTQYGATGSTGRGKLWDCIR*RAIRVF Trigger: GAAAACCCGTATGGCCCTCCACCGGATGCAGTCCCA...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCTTCTTCTTTGGTGGCTaGGATCCATCTGCTGAAGAC | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVFFFGG*DPSAED Trigger: GTCTTCAGCAGATGGATCCCAGCCACCAAAGAAGAA...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAATTTAGGTTTCTTCTTTaGTGGCTGGGATCCATCTGC | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKFRFLL*WLGSIC Trigger: GCAGATGGATCCCAGCCACCAAAGAAGAAACCTAAA...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGACAGCAGTTCTGAGATaGCTCCTCCTGCCAAGGACT | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKTAVLR*LLLPRT Trigger: AGTCCTTGGCAGGAGGAGCCATCTCAGAACTGCTGT...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 |
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CDS-3UTR TCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAAAACATGTTTGGAATCTaGAAGGGTCAACATGACAGG | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKNMFGI*KGQHDR Trigger: CCTGTCATGTTGACCCTTTCAGATTCCAAACATGTT...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAACTCCAATTTTCTACTTaGTTTTGGGCCCAAATGGAC | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKLQFST*FWAQMD Trigger: GTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAG...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCATTAGCATCCAGATGGAGGGAAATCAAGCCACTTCACACAGGGAAGGCAGAACTGCCTCTTCTTCTCTaGACTAGCCCCTTCATCCAT | + |
Preference number: 4 (lower is better) Translates to: ALASRWREIKPLHTGKAELPLLL*TSPFIH Trigger: ATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAG...TTCTGCCTTCCCTGTGTGAAGTGGCTTGATTTCCCTCCATCTGGATGCTAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR TCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTACTGCCTCTTCTTCTCTaGACTAGCCCCTTCATCCAT | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLLPLLL*TSPFIH Trigger: ATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAG...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TCTTTCGAGCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGAGGTCAGGGCCATGCTaGTGCAGTCCAGAGTCCCAT | + |
Preference number: 4 (lower is better) Translates to: SFEHLLLCPTFIHNMELQRSGPC*CSPESH Trigger: ATGGGACTCTGGACTGCATCAGCATGGCCCTGACCT...CTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCTCGCCTATCAAAAGATaGCACCACGTTCAAATCCGA | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVSPIKR*HHVQIR Trigger: TCGGATTTGAACGTGGTGGCATCTTTTGATAGGCGA...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAATCACCAGGTTGCCAATaGTCTTTTCCCAGATATACA | + |
Preference number: 4 (lower is better) Translates to: CRLRASAFLRACLDFCLKSPGCQ*SFPRYT Trigger: TGTATATCTGGGAAAAGAGCATTGGCAACCTGGTGA...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAGCATCAGCCCCTGTTTaGTCAGGCTCACTCTTATCT | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLASAPV*SGSLLS Trigger: AGATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGC...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAGCTTCTTCTTGGATTTaGCATCCCCCTTCACACCCA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLASSWI*HPPSHP Trigger: TGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGC...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKLGRPA*FFLDLP Trigger: TGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAA...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTATGGCTGAGTTCCGCCTaGACTTTACCCTTCGTTGAT | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLWLSSA*TLPFVD Trigger: ATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCA...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAGCAGGAGTTCCCCTCTaGTCCCATGTAAGATCTTCA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLAGVPL*SHVRSS Trigger: TGAAGATCTTACATGGGACCAGAGGGGAACTCCTGC...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TCTTTCGAGCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGTGGGACTGCATCCGGTaGAGGGCCATACGGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: SFEHLLLCPTFIHNMELQWDCIR*RAIRVF Trigger: GAAAACCCGTATGGCCCTCCACCGGATGCAGTCCCA...CTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCTTTAGGTTTCTTCTTTaGTGGCTGGGATCCATCTGC | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVFRFLL*WLGSIC Trigger: GCAGATGGATCCCAGCCACCAAAGAAGAAACCTAAA...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCTCATTCGGCACTCCTTaGAGCTCTATATTGGTGGTT | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVSFGTP*SSILVV Trigger: AACCACCAATATAGAGCTCCAAGGAGTGCCGAATGA...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGACAGCAGTTCTGAGATaGCTCCTCCTGCTGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWTAVLR*LLLLPR Trigger: CCTTGGCAGCAGGAGGAGCCATCTCAGAACTGCTGT...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCAACATGTTTGGAATCTaGAAGGGTCAACATGACAGG | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVNMFGI*KGQHDR Trigger: CCTGTCATGTTGACCCTTTCAGATTCCAAACATGTT...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCTCCAATTTTCTACTTaGTTTTGGGCCCAAATGGAC | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLLQFST*FWAQMD Trigger: GTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAG...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTTTTCATCCAACTCTTTaGAGTCTGGTGCAAATGCAC | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLFHPTL*SLVQMH Trigger: GTGCATTTGCACCAGACTTCAAAGAGTTGGATGAAA...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCTTTCATCCAACTCTTTaGAGTCTGGTGCAAATGCAC | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVFHPTL*SLVQMH Trigger: GTGCATTTGCACCAGACTTCAAAGAGTTGGATGAAA...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCTGGGATCCATCTGCTaGAGACTGCCTCTTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALLGSIC*RLPLLL Trigger: GAGAAGAAGAGGCAGTCTTCAGCAGATGGATCCCAG...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCACTCACAAGCTTATaGCCATCTCGGCTCCAACAC | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTALTSL*PSRLQH Trigger: GTGTTGGAGCCGAGATGGTCATAAGCTTGTGAGTGC...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGCACTCACAAGCTTATaGCCATCTCGGCTCCAACAC | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALALTSL*PSRLQH Trigger: GTGTTGGAGCCGAGATGGTCATAAGCTTGTGAGTGC...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | TCTACCACAGTACAATGTAATCAACGGGTTTGGCTGTCTGAAGGAGCCTCCACCCTATTCACCAAGTCCTaGAGCTTCTGCATAGGCTCT | + |
Preference number: 4 (lower is better) Translates to: STTVQCNQRVWLSEGASTLFTKS*SFCIGS Trigger: AGAGCCTATGCAGAAGCTGCAGGACTTGGTGAATAG...GGTGGAGGCTCCTTCAGACAGCCAAACCCGTTGATTACATTGTACTGTGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR GCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGTCCTTTAGGCCGGCCTaGTTGCTTCTTCTTGGATTT | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKSFRPA*LLLLGF Trigger: AAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGA...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAACTACCTCAGGGGCAATaGGTAAATACAATAGAGCCT | + |
Preference number: 4 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKLPQGQ*VNTIEP Trigger: AGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAG...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTTGGGACTGCATCCGGTaGAGGGCCATACGGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: KRTANAERAKVRKRRVKAWDCIR*RAIRVF Trigger: GAAAACCCGTATGGCCCTCCACCGGATGCAGTCCCA...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TCAGCTTGCACACCACTGCAGTGTGCTGTACAGAGACATGACATGGAGGTAATGTTCTTCTTTGGTGGCTaGGATCCATCTGCTGAAGAC | + |
Preference number: 4 (lower is better) Translates to: SACTPLQCAVQRHDMEVMFFFGG*DPSAED Trigger: GTCTTCAGCAGATGGATCCCAGCCACCAAAGAAGAA...CATTACCTCCATGTCATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAATTCTTCTTTGGTGGCTaGGATCCATCTGCTGAAGAC | + |
Preference number: 4 (lower is better) Translates to: LCPTFIHNMELQEALGGEFFFGG*DPSAED Trigger: GTCTTCAGCAGATGGATCCCAGCCACCAAAGAAGAA...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TCTACCACAGTACAATGTAATCAACGGGTTTGGCTGTCTGAAGGAGCCTCCACCACACCCAGTAGTGGATaGACTTCATCATTCGGCACT | + |
Preference number: 4 (lower is better) Translates to: STTVQCNQRVWLSEGASTTPSSG*TSSFGT Trigger: AGTGCCGAATGATGAAGTCCATCCACTACTGGGTGT...GGTGGAGGCTCCTTCAGACAGCCAAACCCGTTGATTACATTGTACTGTGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAACACCCAGTAGTGGATaGACTTCATCATTCGGCACT | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLTPSSG*TSSFGT Trigger: AGTGCCGAATGATGAAGTCCATCCACTACTGGGTGT...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGACACCCAGTAGTGGATaGACTTCATCATTCGGCACT | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKTPSSG*TSSFGT Trigger: AGTGCCGAATGATGAAGTCCATCCACTACTGGGTGT...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAGGGAATCGAAACCTCTaGTCGCAATCTCCTGAAAGA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLGNRNL*SQSPER Trigger: TCTTTCAGGAGATTGCGACCAGAGGTTTCGATTCCC...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTACTGCCTCTTCTTCTCTaGACTAGCCCCTTCATCCAT | + |
Preference number: 4 (lower is better) Translates to: PNLYTQYGATGSTGRGKLLPLLL*TSPFIH Trigger: ATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAG...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGTTTCTCTTTACCTTTTaGTCCTTTAGGCCGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEFLFTF*SFRPAC Trigger: GCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAA...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGCTATTCACCAAGTCCTaGAGCTTCTGCATAGGCTCT | + |
Preference number: 4 (lower is better) Translates to: CFSAQPLYTIWSYRKHWELFTKS*SFCIGS Trigger: AGAGCCTATGCAGAAGCTGCAGGACTTGGTGAATAG...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTGAAGTCTGGTGCAAATaGACTCCAATTTTCTACTTG | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLEVWCK*TPIFYL Trigger: CAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTC...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCATCAGCCCCTGTTTaGTCAGGCTCACTCTTATCT | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTASAPV*SGSLLS Trigger: AGATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGC...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGCTTCTTCTTGGATTTaGCATCCCCCTTCACACCCA | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALASSWI*HPPSHP Trigger: TGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGC...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTLGRPA*FFLDLP Trigger: TGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAA...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGTGGCTGAGTTCCGCCTaGACTTTACCCTTCGTTGAT | + |
Preference number: 4 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWWLSSA*TLPFVD Trigger: ATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCA...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACAGAGACATGGCAGAACAACATGTTTaGAATCTGAAAGGGTCAACA | + |
Preference number: 4 (lower is better) Translates to: QKPLHQLAHHCSVLYRDMAEQHV*NLKGST Trigger: TGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGC...CATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCAGGAGTTCCCCTCTaGTCCCATGTAAGATCTTCA | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTAGVPL*SHVRSS Trigger: TGAAGATCTTACATGGGACCAGAGGGGAACTCCTGC...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGCAGGAGTTCCCCTCTaGTCCCATGTAAGATCTTCA | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALAGVPL*SHVRSS Trigger: TGAAGATCTTACATGGGACCAGAGGGGAACTCCTGC...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTCAACTCTTTGAAGTCTaGTGCAAATGCACTCCAATT | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLQLFEV*CKCTPI Trigger: AATTGGAGTGCATTTGCACCAGACTTCAAAGAGTTG...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCCAACTCTTTGAAGTCTaGTGCAAATGCACTCCAATT | + |
Preference number: 4 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVQLFEV*CKCTPI Trigger: AATTGGAGTGCATTTGCACCAGACTTCAAAGAGTTG...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCT | + |
Preference number: 4 (lower is better) Translates to: HPVSHLPITTIGLTHTWKLPQGQ*VNTIEP Trigger: AGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAG...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCT | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKLPQGQ*VNTIEP Trigger: AGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAG...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGTTCTTCTTTGGTGGCTaGGATCCATCTGCTGAAGAC | + |
Preference number: 4 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEFFFGG*DPSAED Trigger: GTCTTCAGCAGATGGATCCCAGCCACCAAAGAAGAA...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGTTTAGGTTTCTTCTTTaGTGGCTGGGATCCATCTGC | + |
Preference number: 4 (lower is better) Translates to: HPVSHLPITTIGLTHTWKFRFLL*WLGSIC Trigger: GCAGATGGATCCCAGCCACCAAAGAAGAAACCTAAA...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACC | + |
Preference number: 4 (lower is better) Translates to: ESLFGLLLERKAGPCALLIGLLR*VKGIET Trigger: GGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAAT...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGAACATGTTTGGAATCTaGAAGGGTCAACATGACAGG | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKNMFGI*KGQHDR Trigger: CCTGTCATGTTGACCCTTTCAGATTCCAAACATGTT...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | ATTGCCAGAGGCGTCACTAACCCTTCGCACACTTGGCTTCCTGACTTTGGATTTCCGGGCAAACTCAATTaGTTTAATGGCGGTAGTATT | + |
Preference number: 4 (lower is better) Translates to: IARGVTNPSHTWLPDFGFPGKLN*FNGGSI Trigger: AATACTACCGCCATTAAATCAATTGAGTTTGCCCGG...AAATCCAAAGTCAGGAAGCCAAGTGTGCGAAGGGTTAGTGACGCCTCTGGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR TCA 90 bp | TCAGCTTGCACACCACTGCAGTGTGCTGTACAGAGACATGACATGGAGGTAATGCTCCAATTTTCTACTTaGTTTTGGGCCCAAATGGAC | + |
Preference number: 4 (lower is better) Translates to: SACTPLQCAVQRHDMEVMLQFST*FWAQMD Trigger: GTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAG...CATTACCTCCATGTCATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR TCA 90 bp | TACAGGAAGCACTGGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCTGGGATCCACGCTGGTaGCATCCACTTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: YRKHWEGKVMNERNRRCIWDPRW*HPLPHL Trigger: AAGATGAGGAAGTGGATGTCACCAGCGTGGATCCCA...GATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTACTGAAAGGGTCAACATaGCAGGAGCAGATTTCATGG | + |
Preference number: 4 (lower is better) Translates to: PNLYTQYGATGSTGRGKLLKGST*QEQISW Trigger: CCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAG...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCTATTCACCAAGTCCTaGAGCTTCTGCATAGGCTCT | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALLFTKS*SFCIGS Trigger: AGAGCCTATGCAGAAGCTGCAGGACTTGGTGAATAG...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTATCACCAGGTTGCCAATaGTCTTTTCCCAGATATACA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLSPGCQ*SFPRYT Trigger: TGTATATCTGGGAAAAGAGCATTGGCAACCTGGTGA...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGTCACCAGGTTGCCAATaGTCTTTTCCCAGATATACA | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKSPGCQ*SFPRYT Trigger: TGTATATCTGGGAAAAGAGCATTGGCAACCTGGTGA...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTATCCTTTAGGCCGGCCTaGTTGCTTCTTCTTGGATTT | + |
Preference number: 4 (lower is better) Translates to: PNLYTQYGATGSTGRGKLSFRPA*LLLLGF Trigger: AAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGA...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | GCATTAGCATCCAGATGGAGGGAAATCAAGCCACTTCACACAGGGAAGGCAGAACTCTTTGAAGTCTGGTaGAAATGCACTCCAATTTTC | + |
Preference number: 4 (lower is better) Translates to: ALASRWREIKPLHTGKAELFEVW*KCTPIF Trigger: GAAAATTGGAGTGCATTTGCACCAGACTTCAAAGAG...TTCTGCCTTCCCTGTGTGAAGTGGCTTGATTTCCCTCCATCTGGATGCTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR GCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTACTCTTTGAAGTCTGGTaGAAATGCACTCCAATTTTC | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLLFEVW*KCTPIF Trigger: GAAAATTGGAGTGCATTTGCACCAGACTTCAAAGAG...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | ACTAGAAACTTCCAGCGTGTCCCTGTCACATCTACCACAGTACAATGTAATCAAGCATCAGCCCCTGTTTaGTCAGGCTCACTCTTATCT | + |
Preference number: 4 (lower is better) Translates to: TRNFQRVPVTSTTVQCNQASAPV*SGSLLS Trigger: AGATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGC...TTGATTACATTGTACTGTGGTAGATGTGACAGGGACACGCTGGAAGTTTCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR GCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTGCTTCTTCTTGGATTTaGCATCCCCCTTCACACCCA | + |
Preference number: 4 (lower is better) Translates to: KRTANAERAKVRKRRVKAASSWI*HPPSHP Trigger: TGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGC...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAGCAGAACAACATGTTTaGAATCTGAAAGGGTCAACA | + |
Preference number: 4 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLAEQHV*NLKGST Trigger: TGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGC...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGTCATTCGGCACTCCTTaGAGCTCTATATTGGTGGTT | + |
Preference number: 4 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWSFGTP*SSILVV Trigger: AACCACCAATATAGAGCTCCAAGGAGTGCCGAATGA...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGTCATTCGGCACTCCTTaGAGCTCTATATTGGTGGTT | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALSFGTP*SSILVV Trigger: AACCACCAATATAGAGCTCCAAGGAGTGCCGAATGA...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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3UTR CAA 72 bp | CCTTCCTTTCCTGCCAGTCTGAAATCTTTCGAGCACTaGCTTCTCTGCCCAACCTTTATACACAATATGGAG | + |
Preference number: 4 (lower is better) Translates to: PSFPASLKSFEH*LLCPTFIHNME Trigger: CTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGATTTCAGACTGGCAGGAAAGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTACTCCAATTTTCTACTTaGTTTTGGGCCCAAATGGAC | + |
Preference number: 4 (lower is better) Translates to: PNLYTQYGATGSTGRGKLLQFST*FWAQMD Trigger: GTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAG...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGTTTCATCCAACTCTTTaGAGTCTGGTGCAAATGCAC | + |
Preference number: 4 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWFHPTL*SLVQMH Trigger: GTGCATTTGCACCAGACTTCAAAGAGTTGGATGAAA...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTTTTCATCCAACTCTTTaGAGTCTGGTGCAAATGCAC | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTFHPTL*SLVQMH Trigger: GTGCATTTGCACCAGACTTCAAAGAGTTGGATGAAA...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TACAGGAAGCACTGGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCCTGAAAGGGTCAACATaGCAGGAGCAGATTTCATGG | + |
Preference number: 4 (lower is better) Translates to: YRKHWEGKVMNERNRRCILKGST*QEQISW Trigger: CCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAG...GATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGAAGTCTGGTGCAAATaGACTCCAATTTTCTACTTG | + |
Preference number: 4 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEEVWCK*TPIFYL Trigger: CAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTC...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TGGAAATGGGACACAGCATTAGCATCCAGATGGAGGGAAATCAAGCCACTTCACCAACTCTTTGAAGTCTaGTGCAAATGCACTCCAATT | + |
Preference number: 4 (lower is better) Translates to: WKWDTALASRWREIKPLHQLFEV*CKCTPI Trigger: AATTGGAGTGCATTTGCACCAGACTTCAAAGAGTTG...GTGAAGTGGCTTGATTTCCCTCCATCTGGATGCTAATGCTGTGTCCCATTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CCA 90 bp | TCTTTCGAGCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCT | + |
Preference number: 4 (lower is better) Translates to: SFEHLLLCPTFIHNMELQLPQGQ*VNTIEP Trigger: AGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAG...CTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TACAGGAAGCACTGGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCACACCCAGTAGTGGATaGACTTCATCATTCGGCACT | + |
Preference number: 4 (lower is better) Translates to: YRKHWEGKVMNERNRRCITPSSG*TSSFGT Trigger: AGTGCCGAATGATGAAGTCCATCCACTACTGGGTGT...GATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTGGGAATCGAAACCTCTaGTCGCAATCTCCTGAAAGA | + |
Preference number: 4 (lower is better) Translates to: KRTANAERAKVRKRRVKAGNRNL*SQSPER Trigger: TCTTTCAGGAGATTGCGACCAGAGGTTTCGATTCCC...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190997.7 |
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CDS-3UTR TCA 90 bp | TCTTTCGAGCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGAACATGTTTGGAATCTaGAAGGGTCAACATGACAGG | + |
Preference number: 4 (lower is better) Translates to: SFEHLLLCPTFIHNMELQNMFGI*KGQHDR Trigger: CCTGTCATGTTGACCCTTTCAGATTCCAAACATGTT...CTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGCTCGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTTCGCCTATCAAAAGATaGCACCACGTTCAAATCCGA | + |
Preference number: 4 (lower is better) Translates to: KRTANAERAKVRKRRVKASPIKR*HHVQIR Trigger: TCGGATTTGAACGTGGTGGCATCTTTTGATAGGCGA...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGAAGTCTGGTGCAAATaGACTCCAATTTTCTACTTG | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALEVWCK*TPIFYL Trigger: CAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTC...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
CDS-3UTR GCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGAAGTCTGGTGCAAATaGACTCCAATTTTCTACTTG | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTEVWCK*TPIFYL Trigger: CAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTC...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR GCA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAGACTGGATGGATGTGTaGACTAATTATTTTAGCAAT | + |
Preference number: 4 (lower is better) Translates to: LCPTFIHNMELQEALGGEDWMDV*TNYFSN Trigger: ATTGCTAAAATAATTAGTGCACACATCCATCCAGTC...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
CDS-3UTR CCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTTTTAGGTTTCTTCTTTaGTGGCTGGGATCCATCTGC | + |
Preference number: 4 (lower is better) Translates to: KRTANAERAKVRKRRVKAFRFLL*WLGSIC Trigger: GCAGATGGATCCCAGCCACCAAAGAAGAAACCTAAA...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
||
CDS-3UTR CCA 90 bp | ACTAGAAACTTCCAGCGTGTCCCTGTCACATCTACCACAGTACAATGTAATCAATCATTCGGCACTCCTTaGAGCTCTATATTGGTGGTT | + |
Preference number: 4 (lower is better) Translates to: TRNFQRVPVTSTTVQCNQSFGTP*SSILVV Trigger: AACCACCAATATAGAGCTCCAAGGAGTGCCGAATGA...TTGATTACATTGTACTGTGGTAGATGTGACAGGGACACGCTGGAAGTTTCTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
||
CDS-3UTR CCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGACACAAAGAACAGACTaGATGGATGTGTGCACTAAT | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALTQRTD*MDVCTN Trigger: ATTAGTGCACACATCCATCCAGTCTGTTCTTTGTGT...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTACACAAAGAACAGACTaGATGGATGTGTGCACTAAT | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTTQRTD*MDVCTN Trigger: ATTAGTGCACACATCCATCCAGTCTGTTCTTTGTGT...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
CDS-3UTR CCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACC | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALIGLLR*VKGIET Trigger: GGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAAT...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGAGTTTCGGTTTAAATaGAGAATCTTTCTCTTTACC | + |
Preference number: 4 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKEFRFK*RIFLFT Trigger: GGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTC...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
CDS-3UTR GCA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTCTCTTTGAAGTCTGGTaGAAATGCACTCCAATTTTC | + |
Preference number: 4 (lower is better) Translates to: KRTANAERAKVRKRRVKALFEVW*KCTPIF Trigger: GAAAATTGGAGTGCATTTGCACCAGACTTCAAAGAG...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
||
CDS-3UTR CCA 90 bp | TACAGGAAGCACTGGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCGCAGAACAACATGTTTaGAATCTGAAAGGGTCAACA | + |
Preference number: 4 (lower is better) Translates to: YRKHWEGKVMNERNRRCIAEQHV*NLKGST Trigger: TGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGC...GATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | TACAGGAAGCACTGGGAGGGGAAAGTTATGAATGAAAGAAACAGAAGATGCATCCAACTCTTTGAAGTCTaGTGCAAATGCACTCCAATT | + |
Preference number: 4 (lower is better) Translates to: YRKHWEGKVMNERNRRCIQLFEV*CKCTPI Trigger: AATTGGAGTGCATTTGCACCAGACTTCAAAGAGTTG...GATGCATCTTCTGTTTCTTTCATTCATAACTTTCCCCTCCCAGTGCTTCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGAGTTTCGGTTTAAATaGAGAATCTTTCTCTTTACC | + |
Preference number: 4 (lower is better) Translates to: HLLLCPTFIHNMELQEALEFRFK*RIFLFT Trigger: GGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTC...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CCA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGAGTTTCGGTTTAAATaGAGAATCTTTCTCTTTACC | + |
Preference number: 4 (lower is better) Translates to: ALASLPNLYTQYGATGSTEFRFK*RIFLFT Trigger: GGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTC...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 90 bp | GGAGTTCCCCTCTGGTCCCATGTAAGATCTTCACCAGGTTGCCAATaGTCTTTTCCCAGATATACAGCGCATGCTGCCTCGCAGAGCCCG | + |
Preference number: 5 (lower is better) Translates to: GVPLWSHVRSSPGCQ*SFPRYTAHAASQSP Trigger: CGGGCTCTGCGAGGCAGCATGCGCTGTATATCTGGGAAAAGAGCATTGGCAACCTGGTGAAGATCTTACATGGGACCAGAGGGGAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 90 bp | GACACCACTCCACTAGAGATAGAAGCTATGATGGGTCGGACTGGATaGCAAGCCACGTCCAGCAGGAGTTCCCCTCTGGTCCCATGTAAG | + |
Preference number: 5 (lower is better) Translates to: DTTPLEIEAMMGRTG*QATSSRSSPLVPCK Trigger: CTTACATGGGACCAGAGGGGAACTCCTGCTGGACGTGGCTTGGCATCCAGTCCGACCCATCATAGCTTCTATCTCTAGTGGAGTGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 90 bp | TCTGAGATGGCTCCTCCTGCTGCCAAGGACTGGCTGAGTTCCGCCTaGACTTTACCCTTCGTTGATCCTTCCAGAGGTAAACCTCTGTCC | + |
Preference number: 5 (lower is better) Translates to: SEMAPPAAKDWLSSA*TLPFVDPSRGKPLS Trigger: GGACAGAGGTTTACCTCTGGAAGGATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGCAGGAGGAGCCATCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190997.7 |
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CDS CCA 90 bp | AATGGACACCACTCCACTAGAGATAGAAGCTATGATGGGTCGGACTaGATGCCAAGCCACGTCCAGCAGGAGTTCCCCTCTGGTCCCATG | + |
Preference number: 5 (lower is better) Translates to: NGHHSTRDRSYDGSD*MPSHVQQEFPSGPM Trigger: CATGGGACCAGAGGGGAACTCCTGCTGGACGTGGCTTGGCATCCAGTCCGACCCATCATAGCTTCTATCTCTAGTGGAGTGGTGTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAACATCCATCAAGGAGCTaGGGACTGCATCCGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKHPSRS*GLHPVE Trigger: CTCCACCGGATGCAGTCCCAAGCTCCTTGATGGATG...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAATGCTTCTTCTTGGATTaGCCATCCCCCTTCACACCC | + |
Preference number: 5 (lower is better) Translates to: CRLRASAFLRACLDFCLKCFFLD*PSPFTP Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCA...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAATTTAGGCCGGCCTGCTaGCTTCTTCTTGGATTTGCC | + |
Preference number: 5 (lower is better) Translates to: CRLRASAFLRACLDFCLKFRPAC*LLLGFA Trigger: GGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAA...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 90 bp | TCTGAGATGGCTCCTCCTGCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCCAGTAGTGGA | + |
Preference number: 5 (lower is better) Translates to: SEMAPPAFDPLGRPA*FFLDLPSPFTPSSG Trigger: TCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGCCATCTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CAA 90 bp | CAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACAGAGACATGAGCATCAGCCCCTGTTaGCTCAGGCTCACTCTTATC | + |
Preference number: 5 (lower is better) Translates to: QKPLHQLAHHCSVLYRDMSISPC*LRLTLI Trigger: GATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGCT...CATGTCTCTGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CAA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTACATCCATCAAGGAGCTaGGGACTGCATCCGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLHPSRS*GLHPVE Trigger: CTCCACCGGATGCAGTCCCAAGCTCCTTGATGGATG...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTTGCTTCTTCTTGGATTaGCCATCCCCCTTCACACCC | + |
Preference number: 5 (lower is better) Translates to: ESLFGLLLERKAGPCALLCFFLD*PSPFTP Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCA...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAAAGCATCAGCCCCTGTTaGCTCAGGCTCACTCTTATC | + |
Preference number: 5 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKSISPC*LRLTLI Trigger: GATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGCT...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGCATCCATCAAGGAGCTaGGGACTGCATCCGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEHPSRS*GLHPVE Trigger: CTCCACCGGATGCAGTCCCAAGCTCCTTGATGGATG...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAAATCATTCGGCACTCCTaGGAGCTCTATATTGGTGGT | + |
Preference number: 5 (lower is better) Translates to: CRLRASAFLRACLDFCLKIIRHS*ELYIGG Trigger: ACCACCAATATAGAGCTCCAAGGAGTGCCGAATGAT...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GCCAGAGGCGTCACTAACCCTTCGCACACTTGGCTTCCTGACTTTGGATTTTCATTTAGGCCGGCCTGCTaGCTTCTTCTTGGATTTGCC | + |
Preference number: 5 (lower is better) Translates to: ARGVTNPSHTWLPDFGFSFRPAC*LLLGFA Trigger: GGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAA...TGAAAATCCAAAGTCAGGAAGCCAAGTGTGCGAAGGGTTAGTGACGCCTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CAA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTAAGCATCAGCCCCTGTTaGCTCAGGCTCACTCTTATC | + |
Preference number: 5 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLSISPC*LRLTLI Trigger: GATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGCT...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTATCATTCGGCACTCCTaGGAGCTCTATATTGGTGGT | + |
Preference number: 5 (lower is better) Translates to: ESLFGLLLERKAGPCALLIIRHS*ELYIGG Trigger: ACCACCAATATAGAGCTCCAAGGAGTGCCGAATGAT...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAATTTAGGCCGGCCTGCTaGCTTCTTCTTGGATTTGCC | + |
Preference number: 5 (lower is better) Translates to: LCPTFIHNMELQEALGGEFRPAC*LLLGFA Trigger: GGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAA...TTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCGCACTTTACCCTTCGTaGATCCTTCCAGAGGTAAAC | + |
Preference number: 5 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVALYPS*ILPEVN Trigger: GTTTACCTCTGGAAGGATCAACGAAGGGTAAAGTGC...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAAC | + |
Preference number: 5 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVGRTTC*ESERVN Trigger: GTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCC...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | AGGGAAGGCAGAAACCCCTGCATCAGCTTGCACACCACTGCAGTGTGCTGTACACCTTGGAGCTCTATATaGGTGGTTTTAGGTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: REGRNPCISLHTTAVCCTPWSSI*VVLGFF Trigger: GAAGAAACCTAAAACCACCAATATAGAGCTCCAAGG...TGTACAGCACACTGCAGTGGTGTGCAAGCTGATGCAGGGGTTTCTGCCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CAA 90 bp | TGCCGTCTTCGCGCATCCGCGTTCCTGAGAGCCTGTTTGGACTTCTGCTTGAAACCTTGGAGCTCTATATaGGTGGTTTTAGGTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: CRLRASAFLRACLDFCLKPWSSI*VVLGFF Trigger: GAAGAAACCTAAAACCACCAATATAGAGCTCCAAGG...TTTCAAGCAGAAGTCCAAACAGGCTCTCAGGAACGCGGATGCGCGAAGACGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | AACATGCAATGCAAGGGAACCCCTGATTCTCTAGAGCCCAGCCTCCTGAGCAAAGCACTTTACCCTTCGTaGATCCTTCCAGAGGTAAAC | + |
Preference number: 5 (lower is better) Translates to: NMQCKGTPDSLEPSLLSKALYPS*ILPEVN Trigger: GTTTACCTCTGGAAGGATCAACGAAGGGTAAAGTGC...TTTGCTCAGGAGGCTGGGCTCTAGAGAATCAGGGGTTCCCTTGCATTGCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 90 bp | GGAGAATCTTTCTCTTTACCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCCAGTAGTGGA | + |
Preference number: 5 (lower is better) Translates to: GESFSLPFDPLGRPA*FFLDLPSPFTPSSG Trigger: TCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAAGATTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGGTTCCACGGTCATTTTCTACTTGATTTaGGGCCCAAATGGACACCAC | + |
Preference number: 5 (lower is better) Translates to: AVQRLPDDRVRRTKGSTVIFYLI*GPNGHH Trigger: GTGGTGTCCATTTGGGCCCAAAATCAAGTAGAAAAT...GACCGTGGAACCCTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTAAGCATCAGCCCCTGTTaGCTCAGGCTCACTCTTATC | + |
Preference number: 5 (lower is better) Translates to: PNLYTQYGATGSTGRGKLSISPC*LRLTLI Trigger: GATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGCT...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGATCATTCGGCACTCCTaGGAGCTCTATATTGGTGGT | + |
Preference number: 5 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKIIRHS*ELYIGG Trigger: ACCACCAATATAGAGCTCCAAGGAGTGCCGAATGAT...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GCACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTTGCTTCTTCTTGGATTaGCCATCCCCCTTCACACCC | + |
Preference number: 5 (lower is better) Translates to: ALASLPNLYTQYGATGSTCFFLD*PSPFTP Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCA...AGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
||
CDS-3UTR CAA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTATGCTTCTTCTTGGATTaGCCATCCCCCTTCACACCC | + |
Preference number: 5 (lower is better) Translates to: PNLYTQYGATGSTGRGKLCFFLD*PSPFTP Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCA...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | ATGATTGGCCACGCTGTCCAAAGGCTACCTGATGACAGAGTGAGAAGAACCAAGGCACTTTACCCTTCGTaGATCCTTCCAGAGGTAAAC | + |
Preference number: 5 (lower is better) Translates to: MIGHAVQRLPDDRVRRTKALYPS*ILPEVN Trigger: GTTTACCTCTGGAAGGATCAACGAAGGGTAAAGTGC...CTTGGTTCTTCTCACTCTGTCATCAGGTAGCCTTTGGACAGCGTGGCCAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 90 bp | CAAATCCGAGTCATCGTCTACCGGCAGAACAACATGTTTGGAATCTaGAAGGGTCAACATGACAGGAGCAGATTTCATGGGACACACGAG | + |
Preference number: 5 (lower is better) Translates to: QIRVIVYRQNNMFGI*KGQHDRSRFHGTHE Trigger: CTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTAGACGATGACTCGGATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 90 bp | GAGGGCCATACGGGTTTTCTTCAGGGTCTTCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCTTTGAATCTTCCAGCTCTTCATCAC | + |
Preference number: 5 (lower is better) Translates to: EGHTGFLQGLLPQGQ*VNTIEPLNLPALHH Trigger: GTGATGAAGAGCTGGAAGATTCAAAGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCTGAAGAAAACCCGTATGGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 90 bp | CCTTGGAGCTCTATATTGGTGGTTTTAGGTTTCTTCTTTGGTGGCTaGGATCCATCTGCTGAAGACTGCCTCTTCTTCTCTGAACTAGCC | + |
Preference number: 5 (lower is better) Translates to: PWSSILVVLGFFFGG*DPSAEDCLFFSELA Trigger: GGCTAGTTCAGAGAAGAAGAGGCAGTCTTCAGCAGATGGATCCCAGCCACCAAAGAAGAAACCTAAAACCACCAATATAGAGCTCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | GAGAGCCTGTTTGGACTTCTGCTTGAAAGGAAGGCAGGGCCGTGTGCTCTTCTTACTCCAATTTTCTACTaGATTTTGGGCCCAAATGGA | + |
Preference number: 5 (lower is better) Translates to: ESLFGLLLERKAGPCALLTPIFY*ILGPNG Trigger: TCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAGT...AAGAAGAGCACACGGCCCTGCCTTCCTTTCAAGCAGAAGTCCAAACAGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAAC | + |
Preference number: 5 (lower is better) Translates to: HLLLCPTFIHNMELQEALGRTTC*ESERVN Trigger: GTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCC...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTAGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAAC | + |
Preference number: 5 (lower is better) Translates to: PNLYTQYGATGSTGRGKLGRTTC*ESERVN Trigger: GTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCC...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAAC | + |
Preference number: 5 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWGRTTC*ESERVN Trigger: GTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCC...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGATTTTCTACTTGATTTaGGGCCCAAATGGACACCAC | + |
Preference number: 5 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEIFYLI*GPNGHH Trigger: GTGGTGTCCATTTGGGCCCAAAATCAAGTAGAAAAT...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CATCCCGTGAGCCACTTACCAATCACAACCATTGGTCTCACTCACACTTGGAAGACTCCAATTTTCTACTaGATTTTGGGCCCAAATGGA | + |
Preference number: 5 (lower is better) Translates to: HPVSHLPITTIGLTHTWKTPIFY*ILGPNG Trigger: TCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAGT...CTTCCAAGTGTGAGTGAGACCAATGGTTGTGATTGGTAAGTGGCTCACGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS-3UTR CAA 90 bp | AAAATCCACTCCTTCACCTCCTGGGTGGGAGGCAGAGGCCTTTGTTTTCAACTATTTTCATCCAACTCTTaGAAGTCTGGTGCAAATGCA | + |
Preference number: 5 (lower is better) Translates to: KIHSFTSWVGGRGLCFQLFSSNS*KSGANA Trigger: TGCATTTGCACCAGACTTCAAAGAGTTGGATGAAAA...TAGTTGAAAACAAAGGCCTCTGCCTCCCACCCAGGAGGTGAAGGAGTGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 90 bp | TGCTGTGTTAATCAGGAAGCAACTCCCCTTCCGGGCAAACTCAATTaGTTTAATGGCGGTAGTATTGCTTGTCCCAGTTGTTACTCTGAA | + |
Preference number: 5 (lower is better) Translates to: CCVNQEATPLPGKLN*FNGGSIACPSCYSE Trigger: TTCAGAGTAACAACTGGGACAAGCAATACTACCGCCATTAAATCAATTGAGTTTGCCCGGAAGGGGAGTTGCTTCCTGATTAACACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 90 bp | CGAGAACCTTGTTCTGATCTCGAGGATGATATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACCTCTGGTCGCAATCTCCTGAAAGAA | + |
Preference number: 5 (lower is better) Translates to: REPCSDLEDDIGLLR*VKGIETSGRNLLKE Trigger: TTCTTTCAGGAGATTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCTCGAGATCAGAACAAGGTTCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000188575.7 ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | TGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGTTTTCATCCAACTCTTaGAAGTCTGGTGCAAATGCA | + |
Preference number: 5 (lower is better) Translates to: CFSAQPLYTIWSYRKHWEFSSNS*KSGANA Trigger: TGCATTTGCACCAGACTTCAAAGAGTTGGATGAAAA...CTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGCCTTGGAGCTCTATATaGGTGGTTTTAGGTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWPWSSI*VVLGFF Trigger: GAAGAAACCTAAAACCACCAATATAGAGCTCCAAGG...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGCCTTGGAGCTCTATATaGGTGGTTTTAGGTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: HLLLCPTFIHNMELQEALPWSSI*VVLGFF Trigger: GAAGAAACCTAAAACCACCAATATAGAGCTCCAAGG...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGTTTAGGACCAAGATCTaGCCTTTTGCATTTCCTGTA | + |
Preference number: 5 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWFRTKI*PFAFPV Trigger: TACAGGAAATGCAAAAGGCAAGATCTTGGTCCTAAA...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGACTCCAATTTTCTACTaGATTTTGGGCCCAAATGGA | + |
Preference number: 5 (lower is better) Translates to: HLLLCPTFIHNMELQEALTPIFY*ILGPNG Trigger: TCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAGT...CAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | CCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGGAGGGGAAAGTTATTTTCATCCAACTCTTaGAAGTCTGGTGCAAATGCA | + |
Preference number: 5 (lower is better) Translates to: PNLYTQYGATGSTGRGKLFSSNS*KSGANA Trigger: TGCATTTGCACCAGACTTCAAAGAGTTGGATGAAAA...TAACTTTCCCCTCCCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | ACTTGCTTCTCTGCCCAACCTTTATACACAATATGGAGCTACAGGAAGCACTGGTTTTCATCCAACTCTTaGAAGTCTGGTGCAAATGCA | + |
Preference number: 5 (lower is better) Translates to: TCFSAQPLYTIWSYRKHWFSSNS*KSGANA Trigger: TGCATTTGCACCAGACTTCAAAGAGTTGGATGAAAA...CCAGTGCTTCCTGTAGCTCCATATTGTGTATAAAGGTTGGGCAGAGAAGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027700.15 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 90 bp | ATGACCATCTCGGCTCCAACACAAAGAACAGACTGGATGGATGTGTaGACTAATTATTTTAGCAATGCCTCTGGTCAAGAAATCCCAAAT | + |
Preference number: 5 (lower is better) Translates to: MTISAPTQRTDWMDV*TNYFSNASGQEIPN Trigger: ATTTGGGATTTCTTGACCAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTCTGTTCTTTGTGTTGGAGCCGAGATGGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS-3UTR CAA 90 bp | AAAAGAACAGCAAATGCAGAGAGAGCCAAGGTGAGAAAGAGAAGGGTAAAAGCTATTTTCTACTTGATTTaGGGCCCAAATGGACACCAC | + |
Preference number: 5 (lower is better) Translates to: KRTANAERAKVRKRRVKAIFYLI*GPNGHH Trigger: GTGGTGTCCATTTGGGCCCAAAATCAAGTAGAAAAT...AGCTTTTACCCTTCTCTTTCTCACCTTGGCTCTCTCTGCATTTGCTGTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027700.15 ENSMUST00000190997.7 |
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CDS TCA 72 bp | CACTGCTACAGAAGGCAGCGATGGGATCCACGCTGGTaGCATCCACTTCCTCATCTTCAGCAGCATCAGCCC | + |
Preference number: 6 (lower is better) Translates to: HCYRRQRWDPRW*HPLPHLQQHQP Trigger: GGGCTGATGCTGCTGAAGATGAGGAAGTGGATGTCACCAGCGTGGATCCCATCGCTGCCTTCTGTAGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | AGGTTGCCAATGCTCTTTTCCCAGATATACAGCGCATaGTGCCTCGCAGAGCCCGCCACTATGTACTCCCCA | + |
Preference number: 6 (lower is better) Translates to: RLPMLFSQIYSA*CLAEPATMYSP Trigger: TGGGGAGTACATAGTGGCGGGCTCTGCGAGGCAGCATGCGCTGTATATCTGGGAAAAGAGCATTGGCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | GCTCCTCCTGCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCC | + |
Preference number: 6 (lower is better) Translates to: APPAFDPLGRPA*FFLDLPSPFTP Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027700.15 |
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CDS GCA 72 bp | GCTCCTCCTGCTGCCAAGGACTGGCTGAGTTCCGCCTaGACTTTACCCTTCGTTGATCCTTCCAGAGGTAAA | + |
Preference number: 6 (lower is better) Translates to: APPAAKDWLSSA*TLPFVDPSRGK Trigger: TTTACCTCTGGAAGGATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGCAGGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190997.7 |
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CDS CCA 72 bp | CACTCCACTAGAGATAGAAGCTATGATGGGTCGGACTaGATGCCAAGCCACGTCCAGCAGGAGTTCCCCTCT | + |
Preference number: 6 (lower is better) Translates to: HSTRDRSYDGSD*MPSHVQQEFPS Trigger: AGAGGGGAACTCCTGCTGGACGTGGCTTGGCATCCAGTCCGACCCATCATAGCTTCTATCTCTAGTGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | CCCTTCATCCATCAAGGAGCTTGGGACTGCATCCGGTaGAGGGCCATACGGGTTTTCTTCAGGGTCTTCTAC | + |
Preference number: 6 (lower is better) Translates to: PFIHQGAWDCIR*RAIRVFFRVFY Trigger: GTAGAAGACCCTGAAGAAAACCCGTATGGCCCTCCACCGGATGCAGTCCCAAGCTCCTTGATGGATGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | AGCAGTTCTGAGATGGCTCCTCCTGCTGCCAAGGACTaGCTGAGTTCCGCCTGCACTTTACCCTTCGTTGAT | + |
Preference number: 6 (lower is better) Translates to: SSSEMAPPAAKD*LSSACTLPFVD Trigger: ATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGCAGGAGGAGCCATCTCAGAACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190997.7 |
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CDS GCA 72 bp | ATGGCTCCTCCTGCCAAGGACTGGCTGAGTTCCGCCTaGACTTTACCCTTCGTTGATCCTTCCAGAGGTAAA | + |
Preference number: 6 (lower is better) Translates to: MAPPAKDWLSSA*TLPFVDPSRGK Trigger: TTTACCTCTGGAAGGATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGTCCTTGGCAGGAGGAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 |
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CDS GCA 72 bp | TTCCATGGAGTCCTATTCACCAAGTCCTGCAGCTTCTaGATAGGCTCTGGCTCTCCATCCCTTCCACACGTT | + |
Preference number: 6 (lower is better) Translates to: FHGVLFTKSCSF*IGSGSPSLPHV Trigger: AACGTGTGGAAGGGATGGAGAGCCAGAGCCTATGCAGAAGCTGCAGGACTTGGTGAATAGGACTCCATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | CTCTGGTCCCATGTAAGATCTTCACCAGGTTGCCAATaGTCTTTTCCCAGATATACAGCGCATGCTGCCTCG | + |
Preference number: 6 (lower is better) Translates to: LWSHVRSSPGCQ*SFPRYTAHAAS Trigger: CGAGGCAGCATGCGCTGTATATCTGGGAAAAGAGCATTGGCAACCTGGTGAAGATCTTACATGGGACCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | TTCTCTTTACCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCC | + |
Preference number: 6 (lower is better) Translates to: FSLPFDPLGRPA*FFLDLPSPFTP Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CAA 90 bp | ACCACGTTCAAATCCGAGTCATCGTCTACCGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAACATGACAGGAGCAGATTTCATGGGA | + |
Preference number: 6 (lower is better) Translates to: TTFKSESSSTGRTTC*ESERVNMTGADFMG Trigger: TCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTAGACGATGACTCGGATTTGAACGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 72 bp | GTCATCGTCTACCGGCAGAACAACATGTTTGGAATCTaGAAGGGTCAACATGACAGGAGCAGATTTCATGGG | + |
Preference number: 6 (lower is better) Translates to: VIVYRQNNMFGI*KGQHDRSRFHG Trigger: CCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTAGACGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | AATCTCTCTGCCGTCATAGACTCTTATTATTCGATCTaGTGTGTTAATCAGGAAGCAACTCCCCTTCCGGGC | + |
Preference number: 6 (lower is better) Translates to: NLSAVIDSYYSI*CVNQEATPLPG Trigger: GCCCGGAAGGGGAGTTGCTTCCTGATTAACACAGCAGATCGAATAATAAGAGTCTATGACGGCAGAGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | TGGACTTTTAAGATGGGTGAAGGGAATCGAAACCTCTaGTCGCAATCTCCTGAAAGAACATCCCACTGTGAC | + |
Preference number: 6 (lower is better) Translates to: WTFKMGEGNRNL*SQSPERTSHCD Trigger: GTCACAGTGGGATGTTCTTTCAGGAGATTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000188575.7 ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 72 bp | AATCAGGAAGCAACTCCCCTTCCGGGCAAACTCAATTaGTTTAATGGCGGTAGTATTGCTTGTCCCAGTTGT | + |
Preference number: 6 (lower is better) Translates to: NQEATPLPGKLN*FNGGSIACPSC Trigger: ACAACTGGGACAAGCAATACTACCGCCATTAAATCAATTGAGTTTGCCCGGAAGGGGAGTTGCTTCCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 72 bp | GACACTATGTTATCTGTAGAAGCACTCACAAGCTTATaGCCATCTCGGCTCCAACTGTTAAAGGTGCAGGTC | + |
Preference number: 6 (lower is better) Translates to: DTMLSVEALTSL*PSRLQLLKVQV Trigger: GACCTGCACCTTTAACAGTTGGAGCCGAGATGGTCATAAGCTTGTGAGTGCTTCTACAGATAACATAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188575.7 |
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CDS GCA 72 bp | TCCTGTATAAATATATTCCCCTCGCCTATCAAAAGATaGCACCACGTTCAAATCCGAGTCATCGTCTACCGG | + |
Preference number: 6 (lower is better) Translates to: SCINIFPSPIKR*HHVQIRVIVYR Trigger: CCGGTAGACGATGACTCGGATTTGAACGTGGTGGCATCTTTTGATAGGCGAGGGGAATATATTTATACAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | CTGGCTCTCCATCCCTTCCACACGTTAAAATCTCTCTaGCGTCATAGACTCTTATTATTCGATCTGCTGTGT | + |
Preference number: 6 (lower is better) Translates to: LALHPFHTLKSL*RHRLLLFDLLC Trigger: ACACAGCAGATCGAATAATAAGAGTCTATGACGGCAGAGAGATTTTAACGTGTGGAAGGGATGGAGAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | ACGGGTTTTCTTCAGGGTCTTCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCTTTGAATCTTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: TGFLQGLLPQGQ*VNTIEPLNLPA Trigger: AGCTGGAAGATTCAAAGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCTGAAGAAAACCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 72 bp | TTGAAGTCTGGTGCAAATGCACTCCAATTTTCTACTTaGTTTTGGGCCCAAATGGACACCACTCCACTAGAG | + |
Preference number: 6 (lower is better) Translates to: LKSGANALQFST*FWAQMDTTPLE Trigger: CTCTAGTGGAGTGGTGTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS TCA 72 bp | GACACTATGTTATCTGTAGAAGCACTCACAAGCTTATaGCCATCTCGGCTCCAACACAAAGAACAGACTGGA | + |
Preference number: 6 (lower is better) Translates to: DTMLSVEALTSL*PSRLQHKEQTG Trigger: TCCAGTCTGTTCTTTGTGTTGGAGCCGAGATGGTCATAAGCTTGTGAGTGCTTCTACAGATAACATAGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | CCCAGTAGTGGATGGACTTCATCATTCGGCACTCCTTaGAGCTCTATATTGGTGGTTTTAGGTTTCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: PSSGWTSSFGTP*SSILVVLGFFF Trigger: AAAGAAGAAACCTAAAACCACCAATATAGAGCTCCAAGGAGTGCCGAATGATGAAGTCCATCCACTACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | TGTTCTGATCTCGAGGATGATATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACCTCTGGTCGCAATCTC | + |
Preference number: 6 (lower is better) Translates to: CSDLEDDIGLLR*VKGIETSGRNL Trigger: GAGATTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCTCGAGATCAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000188575.7 ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CAA 72 bp | GTCTGGTGCAAATGCACTCCAATTTTCTACTTGATTTaGGGCCCAAATGGACACCACTCCACTAGAGATAGA | + |
Preference number: 6 (lower is better) Translates to: VWCKCTPIFYLI*GPNGHHSTRDR Trigger: TCTATCTCTAGTGGAGTGGTGTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAGTGCATTTGCACCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS GCA 72 bp | TCGGCTCCAACACAAAGAACAGACTGGATGGATGTGTaGACTAATTATTTTAGCAATGCCTCTGGTCAAGAA | + |
Preference number: 6 (lower is better) Translates to: SAPTQRTDWMDV*TNYFSNASGQE Trigger: TTCTTGACCAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTCTGTTCTTTGTGTTGGAGCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CCA 72 bp | CTTATGACCATCTCGGCTCCAACACAAAGAACAGACTaGATGGATGTGTGCACTAATTATTTTAGCAATGCC | + |
Preference number: 6 (lower is better) Translates to: LMTISAPTQRTD*MDVCTNYFSNA Trigger: GGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTCTGTTCTTTGTGTTGGAGCCGAGATGGTCATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000189786.3 ENSMUST00000190825.7 ENSMUST00000190997.7 |
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CDS CAA 72 bp | TTTGAAGTCTGGTGCAAATGCACTCCAATTTTCTACTaGATTTTGGGCCCAAATGGACACCACTCCACTAGA | + |
Preference number: 6 (lower is better) Translates to: FEVWCKCTPIFY*ILGPNGHHSTR Trigger: TCTAGTGGAGTGGTGTCCATTTGGGCCCAAAATCAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027700.15 ENSMUST00000187505.7 ENSMUST00000190825.7 ENSMUST00000190997.7 |