Pregenerated sensors for RB1CC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025907Ensembl transcript IDs: ENSMUST00000027040.13, ENSMUST00000159530.2, ENSMUST00000159906.8, ENSMUST00000160871.8, ENSMUST00000161327.8, ENSMUST00000162257.8, ENSMUST00000162795.8
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCCGTTTTTCCCCACCTGTTCTTCAGATGTTGTCATTCTCTGTTaGTCAAATGCTCCTGCCTCAGCCTCCTGTGATGCTGGAACTCTG | + |
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Preference number: 1 (lower is better) Translates to: KPFFPTCSSDVVILC*SNAPASASCDAGTL Trigger: CAGAGTTCCAGCATCACAGGAGGCTGAGGCAGGAGCATTTGAGCAACAGAGAATGACAACATCTGAAGAACAGGTGGGGAAAAACGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| 3UTR CCA 90 bp | GCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTaGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: ATNEASHKPQCRLCP*KTSILVRISSYLGG Trigger: TCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR GCA 90 bp | CTCCCTGGAGCCCAGATGATCTGTGTGAAAAGTGCTTTTGAAGACTaGTCATTATTTATGGCTGATCTTAAAGTCAGTCAAATTACACTG | + |
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Preference number: 1 (lower is better) Translates to: LPGAQMICVKSAFED*SLFMADLKVSQITL Trigger: CAGTGTAATTTGACTGACTTTAAGATCAGCCATAAATAATGAGCAGTCTTCAAAAGCACTTTTCACACAGATCATCTGGGCTCCAGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR CCA 90 bp | TTCAATATCTTTGTTCAGTGCCAGCTTTTAAACCTTGAGTTTACATaGTTCTGTTCCACAGAACACCACTTCACCCTGTTACATAGGATA | + |
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Preference number: 1 (lower is better) Translates to: FNIFVQCQLLNLEFT*FCSTEHHFTLLHRI Trigger: TATCCTATGTAACAGGGTGAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCACTGAACAAAGATATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR GCA 90 bp | TCTGAGACACAGGGTCTTCTTCTCTTGCTTCAAATGCTTGAGTGCTaGATTTATAGGCATGAGCCAGGCATATATAATGTTTTTATTATA | + |
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Preference number: 1 (lower is better) Translates to: SETQGLLLLLQMLEC*IYRHEPGIYNVFII Trigger: TATAATAAAAACATTATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAGAAGAAGACCCTGTGTCTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| 3UTR-3UTR CCA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTAGTAGTTTATCAGCACTaGAGGACAAATCAAAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LMRLVTSHSAGSALGKHLVVYQH*RTNQKW Trigger: CCATTTTTGATTTGTCCTCCAGTGCTGATAAACTAC...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTAGTCACAAGCCACAGTaGAGGCTCTGCCCTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTSHKPQ*RLCPWK Trigger: TTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACT...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTCTTCTAGATGCACCTaGAGCTCCCTCACCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: FISTGGQIKNGMRCRDFFSSRCT*SSLTWF Trigger: AAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGA...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTGTAGTTTATCAGCACTaGAGGACAAATCAAAAATGG | + |
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Preference number: 2 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTVVYQH*RTNQKW Trigger: CCATTTTTGATTTGTCCTCCAGTGCTGATAAACTAC...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCGTAGTTTATCAGCACTaGAGGACAAATCAAAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: FISTGGQIKNGMRCRDFFVVYQH*RTNQKW Trigger: CCATTTTTGATTTGTCCTCCAGTGCTGATAAACTAC...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| 3UTR TCA 72 bp | CCTAAGATGCTGAGAGGTTTGAGTGAGTCCTGCACTTaGAAACATCAGTGGCACAGACTCTTCCTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PKMLRGLSESCT*KHQWHRLFLPG Trigger: TCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTGCAGGACTCACTCAAACCTCTCAGCATCTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR GCA 72 bp | TTCCCCACCTGTTCTTCAGATGTTGTCATTCTCTGTTaGTCAAATGCTCCTGCCTCAGCCTCCTGTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: FPTCSSDVVILC*SNAPASASCDA Trigger: AGCATCACAGGAGGCTGAGGCAGGAGCATTTGAGCAACAGAGAATGACAACATCTGAAGAACAGGTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| 3UTR-3UTR CAA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGAGAGTGCGAGGACTCTaGAATTCACAAGAGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLRVRGL*NSQEDK Trigger: TTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCT...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGCTCCCTCACCTGGTTaGAGATCCAGGGCAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIAPSPG*RSRAGR Trigger: TCTTCCTGCCCTGGATCTCAAACCAGGTGAGGGAGC...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| 3UTR CCA 72 bp | GAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTaGAAAACATCTATTTTGGTCCGAATTTCTAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: EASHKPQCRLCP*KTSILVRISSY Trigger: ATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCGTGCAGGCTCTGCCCTaGGAAAACATCTATTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFVQALP*ENIYFG Trigger: ACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCAC...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR GCA 72 bp | CAGGGTCTTCTTCTCTTGCTTCAAATGCTTGAGTGCTaGATTTATAGGCATGAGCCAGGCATATATAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: QGLLLLLQMLEC*IYRHEPGIYNV Trigger: AACATTATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAGAAGAAGACCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| 3UTR GCA 72 bp | ACACAGGGTCTTCTTCTCTTGCTTCAAATGCTTGAGTaGTGCATTTATAGGCATGAGCCAGGCATATATAAT | + |
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Preference number: 3 (lower is better) Translates to: TQGLLLLLQMLE*CIYRHEPGIYN Trigger: ATTATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAGAAGAAGACCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| 3UTR CCA 72 bp | CACAGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTaGTCCGAATTTCTAGTTATTTGGGTGGAAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: HSAGSALGKHLF*SEFLVIWVETK Trigger: TTTTGTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR CCA 72 bp | TTTGTTCAGTGCCAGCTTTTAAACCTTGAGTTTACATaGTTCTGTTCCACAGAACACCACTTCACCCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: FVQCQLLNLEFT*FCSTEHHFTLL Trigger: TAACAGGGTGAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCACTGAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR TCA 72 bp | CTTCAATATCTTTGTTCAGTGCCAGCTTTTAAACCTTaGGTTTACATGGTTCTGTTCCACAGAACACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LQYLCSVPAFKP*VYMVLFHRTPL Trigger: AAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCACTGAACAAAGATATTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR GCA 72 bp | GCCCAGATGATCTGTGTGAAAAGTGCTTTTGAAGACTaGTCATTATTTATGGCTGATCTTAAAGTCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AQMICVKSAFED*SLFMADLKVSQ Trigger: TTGACTGACTTTAAGATCAGCCATAAATAATGAGCAGTCTTCAAAAGCACTTTTCACACAGATCATCTGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| 3UTR GCA 72 bp | TTATTGTTCCTAAGATGTAGCCACTTAAAAGGTAAGTaGAGTCCACCAATGAAGTATATTGTTATGTTGACT | + |
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Preference number: 3 (lower is better) Translates to: LLFLRCSHLKGK*SPPMKYIVMLT Trigger: AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAACAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGAGATCCAGGCGCACCATAGAGCTCTaGGGCTGCAGCCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TQGLLDAPEAPSPGLRSRRTIEL*GCSHRC Trigger: GCACCTGTGGCTGCAGCCCCAGAGCTCTATGGTGCG...CCTGGATCTCAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGGACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGTCTCTCTGGCTCCCCTaGGAGCTCAGGTGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: FPRTQGLLDAPEAPSPGLSLWLP*ELRCTR Trigger: GCGTGTGCACCTGAGCTCCCAGGGGAGCCAGAGAGA...CAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGTCCTTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTATCTCTCTGGCTCCCCTaGGAGCTCAGGTGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: LMRLVTSHSAGSALGKHLSLWLP*ELRCTR Trigger: GCGTGTGCACCTGAGCTCCCAGGGGAGCCAGAGAGA...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | TTCCCAAGGACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGACTCCTGTGTGTGCCTaGTGTGCAGTGTGTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: FPRTQGLLDAPEAPSPGLTPVCA*CAVCPL Trigger: TAGAGGACACACTGCACATCAGGCACACACAGGAGT...CAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGTCCTTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR TCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTTGCCGTCTCCATGACTaGTCTCTCTGGCTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALCRLHD*SLWLPW Trigger: CCAGGGGAGCCAGAGAGATCAGTCATGGAGACGGCA...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGCATCTGCCGTCTCCATaGCTGATCTCTCTGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLHLPSP*LISLAP Trigger: GGGAGCCAGAGAGATCAGTCATGGAGACGGCAGATG...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGCTCCCTCACCTGGTTTaGGATCCAGGGCAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLLPHLV*DPGQEE Trigger: CTCTTCCTGCCCTGGATCTCAAACCAGGTGAGGGAG...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR GCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTCCCTGGGAGCTCAGGTaGACACGCACCATAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALPWELR*TRTIEL Trigger: GAGCTCTATGGTGCGTGTGCACCTGAGCTCCCAGGG...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGAGATCCAGGCATGCTTGTCTCCATTaGGGAATCCAGTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TQGLLDAPEAPSPGLRSRHACLH*GIQSSF Trigger: GAAGGAAGACTGGATTCCGCAATGGAGACAAGCATG...CCTGGATCTCAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR TCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTACTCCTGTGTGTGCCTaGTGTGCAGTGTGTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALTPVCA*CAVCPL Trigger: TAGAGGACACACTGCACATCAGGCACACACAGGAGT...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACACGCACCATAGAGCTCTaGGGCTGCAGCCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTRTIEL*GCSHRC Trigger: GCACCTGTGGCTGCAGCCCCAGAGCTCTATGGTGCG...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR TCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGACATAAGGTGTCCTaGACAGTTAGTGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALGHKVS*TVSGGG Trigger: TCCTCCTCCACTAACTGTTCAGGACACCTTATGTCC...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATTGCCGTCTCCATGACTaGTCTCTCTGGCTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLQMLECCIYRHEPGIYCRLHD*SLWLPW Trigger: CCAGGGGAGCCAGAGAGATCAGTCATGGAGACGGCA...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| CDS-3UTR TCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTTCTTCTAGATGCACCTaGAGCTCCCTCACCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALSSRCT*SSLTWF Trigger: AAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGA...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR GCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACACCCTGGGAGCTCAGGTaGACACGCACCATAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTPWELR*TRTIEL Trigger: GAGCTCTATGGTGCGTGTGCACCTGAGCTCCCAGGG...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTCGCACCATAGAGCTCTaGGGCTGCAGCCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SAGSALGKHLFWSEFLVIRTIEL*GCSHRC Trigger: GCACCTGTGGCTGCAGCCCCAGAGCTCTATGGTGCG...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACACCTCCAGATTGGCCATaGTTGCAGCCCAGCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTPPDWP*LQPSLG Trigger: ACCAAGGCTGGGCTGCAATCATGGCCAATCTGGAGG...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | ACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGAGATCCAGGCTTACATCTCATGTCTaGCAAGTCAGAAACTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TQGLLDAPEAPSPGLRSRLTSHV*QVRNFE Trigger: CTCAAAGTTTCTGACTTGTCAGACATGAGATGTAAG...CCTGGATCTCAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR TCA 90 bp | CAGAATGCCTTGAAGAGACTGAGGACAAACTCTGAGACATCAGTCTTTGATTTATGCCGTCTCCATGACTaGTCTCTCTGGCTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QNALKRLRTNSETSVFDLCRLHD*SLWLPW Trigger: CCAGGGGAGCCAGAGAGATCAGTCATGGAGACGGCA...TAAATCAAAGACTGATGTCTCAGAGTTTGTCCTCAGTCTCTTCAAGGCATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR GCA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTATGTGTGTGCCTGATGTaGAGTGTGTCCTCTAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LMRLVTSHSAGSALGKHLCVCLM*SVSSNS Trigger: GGAATTAGAGGACACACTGCACATCAGGCACACACA...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR GCA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTACATGCTTGTCTCCATTaGGGAATCCAGTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LMRLVTSHSAGSALGKHLHACLH*GIQSSF Trigger: GAAGGAAGACTGGATTCCGCAATGGAGACAAGCATG...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR GCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGCTTGGACAGACATCATaGTTGTCTCCATTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLLGQTS*LSPLRN Trigger: ATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAG...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGAATTTTCGAGGCTTCTaGGTACAAAATGAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLNFRGF*VQNEEG Trigger: GCCTTCCTCATTTTGTACTCAGAAGCCTCGAAAATT...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGTGGCCATCTGCCGTCTCCATaGCTGATCTCTCTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STGGQIKNGMRCRDFFCGHLPSP*LISLAP Trigger: GGGAGCCAGAGAGATCAGTCATGGAGACGGCAGATG...GCCACAGAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATCAGATTGGCCATGATTaGAGCCCAGCCTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQMLECCIYRHEPGIYQIGHD*SPALVL Trigger: CAGCACCAAGGCTGGGCTGCAATCATGGCCAATCTG...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR GCA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTATGTAGGGCAAGTACATaGTGGTGTAGAGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMRLVTSHSAGSALGKHLCRAST*WCRGSK Trigger: CTTTGAACCTCTACACCAGCATGTACTTGCCCTACA...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTCCTTCTGCTGTGTTCTaGTCTCTTCCAACAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALPSAVF*SLPTRS Trigger: AGATCTTGTTGGAAGAGAGCAGAACACAGCAGAAGG...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTCTTGGACAGACATCATaGTTGTCTCCATTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALLGQTS*LSPLRN Trigger: ATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAG...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTAGGGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALRASTC*CRGSKS Trigger: TGACTTTGAACCTCTACACCAGCATGTACTTGCCCT...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGCGCACCATAGAGCTCTaGGGCTGCAGCCACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKNMLKSARTLEFTRGQMRTIEL*GCSHRC Trigger: GCACCTGTGGCTGCAGCCCCAGAGCTCTATGGTGCG...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGTCTCTCTGGCTCCCCTaGGAGCTCAGGTGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLSLWLP*ELRCTR Trigger: GCGTGTGCACCTGAGCTCCCAGGGGAGCCAGAGAGA...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTCTCTCTGGCTCCCCTaGGAGCTCAGGTGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMSLWLP*ELRCTR Trigger: GCGTGTGCACCTGAGCTCCCAGGGGAGCCAGAGAGA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATGCCCAGCCTTGGTGCTaGAGATGTTCATCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQMLECCIYRHEPGIYAQPWC*RCSSWT Trigger: TGTCCATGATGAACATCTTCAGCACCAAGGCTGGGC...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTATGCTCCATTGACTTGTaGAATGAGGTTACCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LMRLVTSHSAGSALGKHLCSIDL*NEVTKD Trigger: ATCCTTGGTAACCTCATTTCACAAGTCAATGGAGCA...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTTTCCCCACCTGTTCTTCAGATGTTGTCATTCTCTGTTGCTCAAATGCGTCTTTAGCATCCACTaGAGCTTCTTCTTGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVFPHLFFRCCHSLLLKCVFSIH*SFFLLD Trigger: GTCCAGCAAGAAGAAGCTTCAGTGGATGCTAAAGAC...GCATTTGAGCAACAGAGAATGACAACATCTGAAGAACAGGTGGGGAAAAACGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGCTTACATCTCATGTCTaGCAAGTCAGAAACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLLTSHV*QVRNFE Trigger: CTCAAAGTTTCTGACTTGTCAGACATGAGATGTAAG...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTGCCGTCTCCATGACTaGTCTCTCTGGCTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYECRLHD*SLWLPW Trigger: CCAGGGGAGCCAGAGAGATCAGTCATGGAGACGGCA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGTCTTTATCCCGCTCTTaGTGCTGCATTGTACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLSLSRS*CCIVLF Trigger: AAAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGA...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGCCCTGGGAGCTCAGGTaGACACGCACCATAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLPWELR*TRTIEL Trigger: GAGCTCTATGGTGCGTGTGCACCTGAGCTCCCAGGG...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCCCTGGGAGCTCAGGTaGACACGCACCATAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTPWELR*TRTIEL Trigger: GAGCTCTATGGTGCGTGTGCACCTGAGCTCCCAGGG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTCTTGAAGCAACAGTGTaGAAAACTGCAGGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALLEATV*KTAGII Trigger: TATGATGCCTGCAGTTTTCCACACTGTTGCTTCAAG...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTAAGAGCAGAGCTTCTTaGCAACGTCATACATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALKSRAS*QRHTFP Trigger: TGGAAATGTATGACGTTGCCAAGAAGCTCTGCTCTT...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGCTCCACCATCATTTCTaGACTTTGTGGATCACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLLHHHF*TLWITY Trigger: ATAAGTGATCCACAAAGTCCAGAAATGATGGTGGAG...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATGACTGTGGGGATGCCTaGCTTGTGGATACCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQMLECCIYRHEPGIYDCGDA*LVDTFC Trigger: ACAAAAGGTATCCACAAGTCAGGCATCCCCACAGTC...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCGACTGTGGGGATGCCTaGCTTGTGGATACCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFDCGDA*LVDTFC Trigger: ACAAAAGGTATCCACAAGTCAGGCATCCCCACAGTC...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCTGCAGCCACAGGTGCTaGGGAAAGAAAACTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFCSHRC*GKKTAS Trigger: ACTAGCAGTTTTCTTTCCTCAGCACCTGTGGCTGCA...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGCATCTGCCGTCTCCATaGCTGATCTCTCTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKNMLKSARTLEFTRGQMHLPSP*LISLAP Trigger: GGGAGCCAGAGAGATCAGTCATGGAGACGGCAGATG...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGCATCTGCCGTCTCCATaGCTGATCTCTCTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMHLPSP*LISLAP Trigger: GGGAGCCAGAGAGATCAGTCATGGAGACGGCAGATG...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGCTCCCTCACCTGGTTTaGGATCCAGGGCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYELPHLV*DPGQEE Trigger: CTCTTCCTGCCCTGGATCTCAAACCAGGTGAGGGAG...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCACACACTCTTCGATCTaGAGCCATGCATTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFTHSSI*SHAFSS Trigger: GGAGGAGAATGCATGGCTGCAGATCGAAGAGTGTGT...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAGCTGTGAGAGTCTTGTaGAGCAGCTCTGCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTAVRVL*SSSAFL Trigger: GAGAAATGCAGAGCTGCTGCACAAGACTCTCACAGC...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTCTGCATTTCTCCAGCTaGACATGTAGAGCAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SAGSALGKHLFWSEFLVILHFSS*TCRAAR Trigger: TCGGGCTGCTCTACATGTCCAGCTGGAGAAATGCAG...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| 3UTR CAA 72 bp | CTGAGACACAGGGTCTTCTTCTCTTGCTTCAAATGCTaGAGTGCTGCATTTATAGGCATGAGCCAGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LRHRVFFSCFKC*SAAFIGMSQAY Trigger: ATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAGAAGAAGACCCTGTGTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCGCTAGGCAATACATCTaGGGAACTGTACTAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFARQYI*GTVLRA Trigger: GGCTCTTAGTACAGTTCCTCAGATGTATTGCCTAGC...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTTCGAAATCAAATGTATaGGCATCGATACTATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: INRQLMRLVTSHSAGSALSKSNV*ASILSG Trigger: TCCAGATAGTATCGATGCTCATACATTTGATTTCGA...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATGGCACAGATCGTCCTTaGTGGTTTGTATACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQMLECCIYRHEPGIYGTDRP*WFVYCC Trigger: ACAGCAGTATACAAACCATCAAGGACGATCTGTGCC...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACACTCCTGTGTGTGCCTaGTGTGCAGTGTGTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNTPVCA*CAVCPL Trigger: TAGAGGACACACTGCACATCAGGCACACACAGGAGT...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCACCTGAAGCTGGTTTaGGATCCAGGGCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTHLKLV*DPGQEE Trigger: CTCTTCCTGCCCTGGATCTCAAACCAGCTTCAGGTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159530.2 |
||
| CDS-3UTR GCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCAGATTGGCCATGATTaGAGCCCAGCCTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTQIGHD*SPALVL Trigger: CAGCACCAAGGCTGGGCTGCAATCATGGCCAATCTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGGAGATTCCACATCATTaGGTCTATCTTGAACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLEIPHH*VYLEHL Trigger: TAAATGTTCAAGATAGACCCAATGATGTGGAATCTC...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTTGCATTCTCCTCCATTaGCCACCAGAACCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTCILLH*PPEPGA Trigger: AGCACCAGGTTCTGGTGGTCAATGGAGGAGAATGCA...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTTTCCCCACCTGTTCTTCAGATGTTGTCATTCTCTGTTGCTCAAATGCTTTGTACAAATGTTCTaGAATGGCACAGATCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFPHLFFRCCHSLLLKCFVQMF*NGTDRP Trigger: AGGACGATCTGTGCCATTTCAGAACATTTGTACAAA...GCATTTGAGCAACAGAGAATGACAACATCTGAAGAACAGGTGGGGAAAAACGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTTTCCCCACCTGTTCTTCAGATGTTGTCATTCTCTGTTGCTCAAATGCAAGAGCACTCAATTCTaGGTTCAATCTAGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVFPHLFFRCCHSLLLKCKSTQF*VQSSLQ Trigger: TTGCAGACTAGATTGAACTCAGAATTGAGTGCTCTT...GCATTTGAGCAACAGAGAATGACAACATCTGAAGAACAGGTGGGGAAAAACGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAACCCTGAGGAATGGCTaGACTTCTGAAGGACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTTLRNG*TSEGQN Trigger: ATTTTGTCCTTCAGAAGTGCAGCCATTCCTCAGGGT...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGTGTGTGCCTGATGTaGAGTGTGTCCTCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGSALGKHLFWSEFLVICVCLM*SVSSNS Trigger: GGAATTAGAGGACACACTGCACATCAGGCACACACA...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGTGGCTGTGTGTGCCTGATGTaGAGTGTGTCCTCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGGQIKNGMRCRDFFCGCVCLM*SVSSNS Trigger: GGAATTAGAGGACACACTGCACATCAGGCACACACA...GCCACAGAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | GCCGTTTTTCCCCACCTGTTCTTCAGATGTTGTCATTCTCTGTTGCTCAAATGCACAAATGTTCTGAAATaGCACAGATCGTCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVFPHLFFRCCHSLLLKCTNVLK*HRSSLM Trigger: CATCAAGGACGATCTGTGCCATTTCAGAACATTTGT...GCATTTGAGCAACAGAGAATGACAACATCTGAAGAACAGGTGGGGAAAAACGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCTTGAAGAATCTTCTCTaGCTGACTCAAAGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFLKNLL*LTQRQE Trigger: CTCCTGCCTTTGAGTCAGCCAGAGAAGATTCTTCAA...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| 3UTR CAA 72 bp | CCACAGTGCAGGCTCTGCCCTTGGAAAACATCTATTTaGGTCCGAATTTCTAGTTATTTGGGTGGAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQCRLCPWKTSI*VRISSYLGGNK Trigger: TTTGTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAAGCCCAGCCTTGGTGCTaGAGATGTTCATCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQAQPWC*RCSSWT Trigger: TGTCCATGATGAACATCTTCAGCACCAAGGCTGGGC...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAGCACTTCCTaGCCAGAGATTCCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTNQSTS*PEIPHH Trigger: ATGATGTGGAATCTCTGGTCAGGAAGTGCTTTGATT...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAGAGCCTCAACAATTCTaGCTCTTTCTAACAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTEPQQF*LFLTAL Trigger: TAGAGCTGTTAGAAAGAGTCAGAATTGTTGAGGCTC...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACGGCACAGATCGTCCTTaGTGGTTTGTATACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNGTDRP*WFVYCC Trigger: ACAGCAGTATACAAACCATCAAGGACGATCTGTGCC...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCTGCAGCCACAGGTGCTaGGGAAAGAAAACTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVTIQLMFINRQLMRLVCSHRC*GKKTAS Trigger: ACTAGCAGTTTTCTTTCCTCAGCACCTGTGGCTGCA...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTTGCAGCCACAGGTGCTaGGGAAAGAAAACTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTCSHRC*GKKTAS Trigger: ACTAGCAGTTTTCTTTCCTCAGCACCTGTGGCTGCA...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTCTTCTAGATGCACCTaGAGCTCCCTCACCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYISSRCT*SSLTWF Trigger: AAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCTACAAGGCGGAGCAGTaGCTGCAGTTTTTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLVTIQLMFINRQLMRLVYKAEQ*LQFFSI Trigger: GATGGAGAAAAACTGCAGGCACTGCTCCGCCTTGTA...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGCTGTGAGAGTCTTGTaGAGCAGCTCTGCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIAVRVL*SSSAFL Trigger: GAGAAATGCAGAGCTGCTGCACAAGACTCTCACAGC...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGTGGCCCTTCTGCTGTGTTCTaGTCTCTTCCAACAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: STGGQIKNGMRCRDFFCGPSAVF*SLPTRS Trigger: AGATCTTGTTGGAAGAGAGCAGAACACAGCAGAAGG...GCCACAGAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACATCCCGCTCTTGCTGCTaGATTGTACTTTTTAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTSRSCC*IVLFSL Trigger: TAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGA...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACATTATCCCGCTCTTGCTaGTGCATTGTACTTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTLSRSC*CIVLFS Trigger: GCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAA...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCAGCTAGCAATCATCTaGTCCAAGGCATACAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTQLAII*SKAYSR Trigger: TCGGCTGTATGCCTTGGACCAGATGATTGCTAGCTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGCAGCTAGCAATCATCTaGTCCAAGGCATACAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLQLAII*SKAYSR Trigger: TCGGCTGTATGCCTTGGACCAGATGATTGCTAGCTG...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCCTGCATTTCTCCAGCTaGACATGTAGAGCAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFLHFSS*TCRAAR Trigger: TCGGGCTGCTCTACATGTCCAGCTGGAGAAATGCAG...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGTGGCTTGAAGAATCTTCTCTaGCTGACTCAAAGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STGGQIKNGMRCRDFFCGLKNLL*LTQRQE Trigger: CTCCTGCCTTTGAGTCAGCCAGAGAAGATTCTTCAA...GCCACAGAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTGCTAGGCAATACATCTaGGGAACTGTACTAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTARQYI*GTVLRA Trigger: GGCTCTTAGTACAGTTCCTCAGATGTATTGCCTAGC...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTAGGAGGAGTTTTTGGTaGGGTAGTGGTTGTAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIRRSFW*GSGCNA Trigger: GGCATTACAACCACTACCTCACCAAAAACTCCTCCT...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGAGGAGGAGTTTTTGGTaGGGTAGTGGTTGTAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLRRSFW*GSGCNA Trigger: GGCATTACAACCACTACCTCACCAAAAACTCCTCCT...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAAGGACATAAGGTGTCCTaGACAGTTAGTGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQGHKVS*TVSGGG Trigger: TCCTCCTCCACTAACTGTTCAGGACACCTTATGTCC...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGTGGCACAAGTCAGAAACTTTaGGTTTCAACTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STGGQIKNGMRCRDFFCGTSQKL*VSTPAA Trigger: AGCTGCAGGAGTTGAAACTCAAAGTTTCTGACTTGT...GCCACAGAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGCAGCCACAGGTGCTaGGGAAAGAAAACTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFCSHRC*GKKTAS Trigger: ACTAGCAGTTTTCTTTCCTCAGCACCTGTGGCTGCA...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACTGTAGGGCAAGTACATaGTGGTGTAGAGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNCRAST*WCRGSK Trigger: CTTTGAACCTCTACACCAGCATGTACTTGCCCTACA...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCATGCTTGTCTCCATTaGGGAATCCAGTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTHACLH*GIQSSF Trigger: GAAGGAAGACTGGATTCCGCAATGGAGACAAGCATG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCCATGCTTGTCTCCATTaGGGAATCCAGTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLVTIQLMFINRQLMRLVHACLH*GIQSSF Trigger: GAAGGAAGACTGGATTCCGCAATGGAGACAAGCATG...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACCACTTCAGTCTGACGTaGAGATTGTTTGCTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNHFSLT*RLFASS Trigger: AGAGCTAGCAAACAATCTCCACGTCAGACTGAAGTG...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTAGGTTGTTCTGTGTTTaGATGGGAGATGGTTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAGSALGKHLFWSEFLVIRLFCV*MGDGFE Trigger: TTCGAAACCATCTCCCATCCAAACACAGAACAACCT...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCTCATTGGGTCTATCTTaGACATTTATCCAGTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFSLGLS*TFIQSN Trigger: GTTAGACTGGATAAATGTTCAAGATAGACCCAATGA...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACACAAGTCAGAAACTTTaGGTTTCAACTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNTSQKL*VSTPAA Trigger: AGCTGCAGGAGTTGAAACTCAAAGTTTCTGACTTGT...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACTCATTGGGTCTATCTTaGACATTTATCCAGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNSLGLS*TFIQSV Trigger: CACCGACTGGATAAATGTTCAAGATAGACCCAATGA...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTTCAGCATTTCCTTCTaGTGTGTTCTGCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEFSISF*CVLLSS Trigger: GGAAGAGAGCAGAACACAGCAGAAGGAAATGCTGAA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACATCATATGCTTGGCGATaGAAAGATGTAACATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTSYAWR*KDVTLS Trigger: AGACAATGTTACATCTTTGCATCGCCAAGCATATGA...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCAAGGTTCTGGATAAGTaGTTCATACTTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFKVLDK*FILLFL Trigger: CAAGAAGAGAAGTATGAAGCACTTATCCAGAACCTT...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTCTTGGACAGACATCATaGTTGTCTCCATTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYILGQTS*LSPLRN Trigger: ATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAG...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGGTTGGACAGACATCATaGTTGTCTCCATTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEVGQTS*LSPLRN Trigger: ATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAC...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGCCCTGTAACTATGTCTaGTTAGGCACTCCAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLPCNYV*LGTPIV Trigger: CACTATTGGAGTGCCTAACCAGACATAGTTACAGGG...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTCCCTGTAACTATGTCTaGTTAGGCACTCCAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIPCNYV*LGTPIV Trigger: CACTATTGGAGTGCCTAACCAGACATAGTTACAGGG...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCACTTCAGTCTGACGTaGAGATTGTTTGCTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTHFSLT*RLFASS Trigger: AGAGCTAGCAAACAATCTCCACGTCAGACTGAAGTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGAGGGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYERASTC*CRGSKS Trigger: TGACTTTGAACCTCTACACCAGCATGTACTTGCCCT...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACATCTTTCTCAAGGTTCTaGATAAGTGCTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTSFSRF*ISASYF Trigger: GAAGTATGAAGCACTTATCCAGAACCTTGAGAAAGA...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCCAAAGGCAGGAGTTTTaGCTATTTGATTCTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFQRQEF*LFDSQD Trigger: ATCTTGAGAATCAAATAGCCAAAACTCCTGCCTTTG...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAGATAACATGTTTTCTTaGACAGACATCATGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTDNMFS*TDIMLV Trigger: GACAAGCATGATGTCTGTCCAAGAAAACATGTTATC...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGTGCTGGACAGTACTTTaGCAAGATTCCCTAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKNMLKSARTLEFTRGQMCWTVL*QDSLSS Trigger: AGAACTTAGGGAATCTTGTCAAAGTACTGTCCAGCA...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGAATCAAAGCACTTCCTaGCCAGAGATTCCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMNQSTS*PEIPHH Trigger: ATGATGTGGAATCTCTGGTCAGGAAGTGCTTTGATT...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGGAGCCTCAACAATTCTaGCTCTTTCTAACAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEEPQQF*LFLTAL Trigger: TAGAGCTGTTAGAAAGAGTCAGAATTGTTGAGGCTC...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCACAAGTCAGAAACTTTaGGTTTCAACTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVTIQLMFINRQLMRLVTSQKL*VSTPAA Trigger: AGCTGCAGGAGTTGAAACTCAAAGTTTCTGACTTGT...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTCAATCAAAGAGGTTCTaGCATTTTGCATTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAGSALGKHLFWSEFLVIQSKRF*HFAFPH Trigger: ATGAGGAAATGCAAAATGTCAGAACCTCTTTGATTG...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTTGAGTTTCAACTCCTaGAGCTGTTGCTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYILSFNS*SCCSFS Trigger: GGAAAAAGAGCAACAGCTGCAGGAGTTGAAACTCAA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGAGTTTCAACTCCTaGAGCTGTTGCTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMLSFNS*SCCSFS Trigger: GGAAAAAGAGCAACAGCTGCAGGAGTTGAAACTCAA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACCTTCTGCTGTGTTCTaGTCTCTTCCAACAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQPSAVF*SLPTRS Trigger: AGATCTTGTTGGAAGAGAGCAGAACACAGCAGAAGG...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTTCAGCATTTCCTTCTaGTGTGTTCTGCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFFSISF*CVLLSS Trigger: GGAAGAGAGCAGAACACAGCAGAAGGAAATGCTGAA...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTAAGGTTCTGGATAAGTaGTTCATACTTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSALGKHLFWSEFLVIKVLDK*FILLFL Trigger: CAAGAAGAGAAGTATGAAGCACTTATCCAGAACCTT...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATGCCTTGAAGAGACTGAGGACAAACTCTGAGACATCAGTCTTTGATTTAAAGGTTCTGGATAAGTaGTTCATACTTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNALKRLRTNSETSVFDLKVLDK*FILLFL Trigger: CAAGAAGAGAAGTATGAAGCACTTATCCAGAACCTT...TAAATCAAAGACTGATGTCTCAGAGTTTGTCCTCAGTCTCTTCAAGGCATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCGAGGTTCTGACATTTTaGATTTCCTCATTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFEVLTF*ISSFFL Trigger: AAGAAAGAATGAGGAAATGCAAAATGTCAGAACCTC...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTCCCGCTCTTGCTGCTaGATTGTACTTTTTAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYESRSCC*IVLFSL Trigger: TAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTCCCGCTCTTGCTGCTaGATTGTACTTTTTAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMSRSCC*IVLFSL Trigger: TAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTTTATCCCGCTCTTGCTaGTGCATTGTACTTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTLSRSC*CIVLFS Trigger: GCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAA...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTTATCCCGCTCTTGCTaGTGCATTGTACTTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYELSRSC*CIVLFS Trigger: GCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGAAGAGCAGAGCTTCTTaGCAACGTCATACATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEKSRAS*QRHTFP Trigger: TGGAAATGTATGACGTTGCCAAGAAGCTCTGCTCTT...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGAGGTTGTTCTGTGTTTaGATGGGAGATGGTTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYERLFCV*MGDGFE Trigger: TTCGAAACCATCTCCCATCCAAACACAGAACAACCT...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACACAAATGTTCTGAAATaGCACAGATCGTCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CPWKTSILVRISSYLGGNTNVLK*HRSSLM Trigger: CATCAAGGACGATCTGTGCCATTTCAGAACATTTGT...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CCA 90 bp | CAGAATGCCTTGAAGAGACTGAGGACAAACTCTGAGACATCAGTCTTTGATTTATCTTTCTCAAGGTTCTaGATAAGTGCTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNALKRLRTNSETSVFDLSFSRF*ISASYF Trigger: GAAGTATGAAGCACTTATCCAGAACCTTGAGAAAGA...TAAATCAAAGACTGATGTCTCAGAGTTTGTCCTCAGTCTCTTCAAGGCATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | CAGAATGCCTTGAAGAGACTGAGGACAAACTCTGAGACATCAGTCTTTGATTTACAAAGGCAGGAGTTTTaGCTATTTGATTCTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNALKRLRTNSETSVFDLQRQEF*LFDSQD Trigger: ATCTTGAGAATCAAATAGCCAAAACTCCTGCCTTTG...TAAATCAAAGACTGATGTCTCAGAGTTTGTCCTCAGTCTCTTCAAGGCATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATTGAAGAATCTTCTCTaGCTGACTCAAAGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQLKNLL*LTQRQE Trigger: CTCCTGCCTTTGAGTCAGCCAGAGAAGATTCTTCAA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCAATTTTCGAGGCTTCTaGGTACAAAATGAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFNFRGF*VQNEEG Trigger: GCCTTCCTCATTTTGTACTCAGAAGCCTCGAAAATT...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTTGTACAAATGTTCTaGAATGGCACAGATCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMFVQMF*NGTDRP Trigger: AGGACGATCTGTGCCATTTCAGAACATTTGTACAAA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGGATTGGAGTTCTTGCTaGTGCTTTTCCTTTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMDWSSC*CFSFSV Trigger: AACACTAAAGGAAAAGCATCAGCAAGAACTCCAATC...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGGATTGGAGTTCTTGCTaGTGCTTTTCCTTTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKNMLKSARTLEFTRGQMDWSSC*CFSFSV Trigger: AACACTAAAGGAAAAGCATCAGCAAGAACTCCAATC...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTAAGAGCACTCAATTCTaGGTTCAATCTAGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTKSTQF*VQSSLQ Trigger: TTGCAGACTAGATTGAACTCAGAATTGAGTGCTCTT...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATTGAGTTTCAACTCCTaGAGCTGTTGCTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQLSFNS*SCCSFS Trigger: GGAAAAAGAGCAACAGCTGCAGGAGTTGAAACTCAA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTCTTTATCCCGCTCTTaGTGCTGCATTGTACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYESLSRS*CCIVLF Trigger: AAAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGACTTCCTCTTCAAGCTaGTTCTTCTCTTCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMTSSSS*FFSSSK Trigger: TTTGCTTGAAGAGAAGAAGCAGCTTGAAGAGGAAGT...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTTCCTCTTCAAGCTaGTTCTTCTCTTCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLTSSSS*FFSSSK Trigger: TTTGCTTGAAGAGAAGAAGCAGCTTGAAGAGGAAGT...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCCTTGAAGCAACAGTGTaGAAAACTGCAGGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFLEATV*KTAGII Trigger: TATGATGCCTGCAGTTTTCCACACTGTTGCTTCAAG...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCCCAATAGTGGAATCTTaGCCATTACTGAAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFPIVES*PLLKQQ Trigger: CTGCTGTTTCAGTAATGGCCAAGATTCCACTATTGG...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGGGATGCCTGACTTGTaGATACCTTTTGTTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIGMPDL*IPFVHL Trigger: TAAATGAACAAAAGGTATCCACAAGTCAGGCATCCC...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCGGGATGCCTGACTTGTaGATACCTTTTGTTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLVTIQLMFINRQLMRLVGMPDL*IPFVHL Trigger: TAAATGAACAAAAGGTATCCACAAGTCAGGCATCCC...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGCTCCACCATCATTTCTaGACTTTGTGGATCACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMLHHHF*TLWITY Trigger: ATAAGTGATCCACAAAGTCCAGAAATGATGGTGGAG...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTCGAAATCAAATGTATaGGCATCGATACTATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMSKSNV*ASILSG Trigger: TCCAGATAGTATCGATGCTCATACATTTGATTTCGA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTTTGTTCTAAGCACTaGAATTCAGCTCTCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMFCSKH*NSALND Trigger: GTCATTGAGAGCTGAATTTCAGTGCTTAGAACAAAA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTTTTGTTCTAAGCACTaGAATTCAGCTCTCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEFCSKH*NSALND Trigger: GTCATTGAGAGCTGAATTTCAGTGCTTAGAACAAAA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR TCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCAAGAGCACTCAATTCTaGGTTCAATCTAGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFKSTQF*VQSSLQ Trigger: TTGCAGACTAGATTGAACTCAGAATTGAGTGCTCTT...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR TCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCAATCAAAGAGGTTCTaGCATTTTGCATTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTQSKRF*HFAFPH Trigger: ATGAGGAAATGCAAAATGTCAGAACCTCTTTGATTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTACTTTCTTATTCCATaGCACAGCTTTCACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIYFLIP*HSFHSV Trigger: TACAGAGTGAAAGCTGTGTCATGGAATAAGAAAGTA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTACTTTCTTATTCCATaGCACAGCTTTCACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMYFLIP*HSFHSV Trigger: TACAGAGTGAAAGCTGTGTCATGGAATAAGAAAGTA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCTACTTTCTTATTCCATaGCACAGCTTTCACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLVTIQLMFINRQLMRLVYFLIP*HSFHSV Trigger: TACAGAGTGAAAGCTGTGTCATGGAATAAGAAAGTA...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTCATATGCTTGGCGATaGAAAGATGTAACATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYISYAWR*KDVTLS Trigger: AGACAATGTTACATCTTTGCATCGCCAAGCATATGA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAAACTTCCTCTTCAAGCTaGTTCTTCTCTTCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQTSSSS*FFSSSK Trigger: TTTGCTTGAAGAGAAGAAGCAGCTTGAAGAGGAAGT...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGTCTTTCTCAAGGTTCTaGATAAGTGCTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKNMLKSARTLEFTRGQMSFSRF*ISASYF Trigger: GAAGTATGAAGCACTTATCCAGAACCTTGAGAAAGA...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCAAAGGCAGGAGTTTTaGCTATTTGATTCTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTQRQEF*LFDSQD Trigger: ATCTTGAGAATCAAATAGCCAAAACTCCTGCCTTTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGGATAACATGTTTTCTTaGACAGACATCATGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLDNMFS*TDIMLV Trigger: GACAAGCATGATGTCTGTCCAAGAAAACATGTTATC...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
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| CDS-3UTR TCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCCAATCAAAGAGGTTCTaGCATTTTGCATTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFQSKRF*HFAFPH Trigger: ATGAGGAAATGCAAAATGTCAGAACCTCTTTGATTG...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATCATATGCTTGGCGATaGAAAGATGTAACATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQSYAWR*KDVTLS Trigger: AGACAATGTTACATCTTTGCATCGCCAAGCATATGA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGAGGTTCTGACATTTTaGATTTCCTCATTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIEVLTF*ISSFFL Trigger: AAGAAAGAATGAGGAAATGCAAAATGTCAGAACCTC...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR GCA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGGAGGTTCTGACATTTTaGATTTCCTCATTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMEVLTF*ISSFFL Trigger: AAGAAAGAATGAGGAAATGCAAAATGTCAGAACCTC...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTGTTTGGATGGGAGATaGTTTCGAAATCAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYICLDGR*FRNQMY Trigger: ATACATTTGATTTCGAAACCATCTCCCATCCAAACA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGTGTTTGGATGGGAGATaGTTTCGAAATCAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLCLDGR*FRNQMY Trigger: ATACATTTGATTTCGAAACCATCTCCCATCCAAACA...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CCA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTCTATTTCATATGCTTaGCGATGCAAAGATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRVVYQHWRTNQKWYESISYA*RCKDVT Trigger: TGTTACATCTTTGCATCGCCAAGCATATGAAATAGA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTCTATTTCATATGCTTaGCGATGCAAAGATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FLRCSHLKGKCSPPMKYISISYA*RCKDVT Trigger: TGTTACATCTTTGCATCGCCAAGCATATGAAATAGA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CCA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCGATAACATGTTTTCTTaGACAGACATCATGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FISTGGQIKNGMRCRDFFDNMFS*TDIMLV Trigger: GACAAGCATGATGTCTGTCCAAGAAAACATGTTATC...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATCTATTTCATATGCTTaGCGATGCAAAGATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: QMLVTTLVTIQLMFINRQSISYA*RCKDVT Trigger: TGTTACATCTTTGCATCGCCAAGCATATGAAATAGA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS TCA 90 bp | AGGTGCACACGCACCATAGAGCTCTGGGGCTGCAGCCACAGGTGCTaGGGAAAGAAAACTGCTAGTGCGGAGTTTACTCACTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCTRTIELWGCSHRC*GKKTASAEFTHFLF Trigger: GAAGAGGAAGTGAGTAAACTCCGCACTAGCAGTTTTCTTTCCTCAGCACCTGTGGCTGCAGCCCCAGAGCTCTATGGTGCGTGTGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CAA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGGCTCCCTCACCTGGTTaGAGATCCAGGGCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLAPSPG*RSRAGR Trigger: TCTTCCTGCCCTGGATCTCAAACCAGGTGAGGGAGC...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CAA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGAACAGTCCTCCAGATaGGCCATGATTGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: INRQLMRLVTSHSAGSALEQSSR*AMIAAQ Trigger: CTGGGCTGCAATCATGGCCAATCTGGAGGACTGTTC...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGAGATCCAGGTTGACCAGTCTCTCCTaGTCTTTCTCAAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQGLLDAPEAPSPGLRSRLTSLS*SFSRFW Trigger: CCAGAACCTTGAGAAAGACAAGGAGAGACTGGTCAA...CCTGGATCTCAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS-3UTR CAA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTATGCATTCTCCTCCATaGACCACCAGAACCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: INRQLMRLVTSHSAGSALMHSPP*TTRTWC Trigger: GCACCAGGTTCTGGTGGTCAATGGAGGAGAATGCAT...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
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| CDS-3UTR CAA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGGGACAGACATCATGCTaGTCTCCATTGCGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLGQTSC*SPLRNP Trigger: TGGATTCCGCAATGGAGACAAGCATGATGTCTGTCC...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CAA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGTTTGCTAGCTCTTGTTaGGCAGTGGTGCACTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLFASSC*AVVHFC Trigger: ACAGAAGTGCACCACTGCCAAACAAGAGCTAGCAAA...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CAA 90 bp | CACTTGAAAACATCAGTGGCACAGACTCTTCCTCCCTGGAGCCCAGATGATCTGCAGGTTGTTCTGTGTTaGGATGGGAGATGGTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HLKTSVAQTLPPWSPDDLQVVLC*DGRWFR Trigger: TCGAAACCATCTCCCATCCAAACACAGAACAACCTG...CAGATCATCTGGGCTCCAGGGAGGAAGAGTCTGTGCCACTGATGTTTTCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGGGTCTTCTAGATGCACCTGAAGCTCCCTCACCTGGTTTGAGATCCAGGGCTCTTGCTGCTGCATaGTACTTTTTAGCTTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQGLLDAPEAPSPGLRSRALAAA*YFLAYH Trigger: GTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGC...CCTGGATCTCAAACCAGGTGAGGGAGCTTCAGGTGCATCTAGAAGACCCTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
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| CDS GCA 90 bp | GAAAGAAAACTGCTAGTGCGGAGTTTACTCACTTCCTCTTCAAGCTaGTTCTTCTCTTCAAGCAAACGAGCTCGGTCCTCAGAGAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ERKLLVRSLLTSSSS*FFSSSKRARSSESD Trigger: GTCGCTCTCTGAGGACCGAGCTCGTTTGCTTGAAGAGAAGAAGCAGCTTGAAGAGGAAGTGAGTAAACTCCGCACTAGCAGTTTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS-3UTR CAA 90 bp | CTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTGGAAAACATCTAGTTCCGCAACTAAGCTaGAAGAATCTTCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMRLVTSHSAGSALGKHLVPQLS*KNLLWL Trigger: CAGCCAGAGAAGATTCTTCAAGCTTAGTTGCGGAAC...TAGATGTTTTCCAAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAGCTCCCTCACCTGGTTaGAGATCCAGGGCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTAPSPG*RSRAGR Trigger: TCTTCCTGCCCTGGATCTCAAACCAGGTGAGGGAGC...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS TCA 90 bp | GTTCTGAAATGGCACAGATCGTCCTTGATGGTTTGTATACTGCTGTaGGAGTCTTGTGCAGCAGCTCTGCATTTCTCCAGCTGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: VLKWHRSSLMVCILL*ESCAAALHFSSWTC Trigger: ACATGTCCAGCTGGAGAAATGCAGAGCTGCTGCACAAGACTCTCACAGCAGTATACAAACCATCAAGGACGATCTGTGCCATTTCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS TCA 90 bp | CGTTCAGTACCGGTGGGATCTGGAGCTACATGCTCCATTGACTTGTaGAATGAGGTTACCAAGGATGTGTTCGTTGTTCTAGGCATATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSVPVGSGATCSIDL*NEVTKDVFVVLGIS Trigger: TGATATGCCTAGAACAACGAACACATCCTTGGTAACCTCATTTCACAAGTCAATGGAGCATGTAGCTCCAGATCCCACCGGTACTGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000162795.8 |
||
| CDS TCA 90 bp | CTGTCTTTAGCATCCACTGAAGCTTCTTCTTGCTGGACAGTACTTTaGCAAGATTCCCTAAGTTCTTTGCCACGTTCAGTACCGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLASTEASSCWTVL*QDSLSSLPRSVPVG Trigger: TCCCACCGGTACTGAACGTGGCAAAGAACTTAGGGAATCTTGTCAAAGTACTGTCCAGCAAGAAGAAGCTTCAGTGGATGCTAAAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000162795.8 |
||
| CDS TCA 90 bp | TCAAAGCACTTCCTGACCAGAGATTCCACATCATTGGGTCTATCTTaGACATTTATCCAGTCGGTGGGATCTGGAGCTACATGCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SKHFLTRDSTSLGLS*TFIQSVGSGATCSI Trigger: AATGGAGCATGTAGCTCCAGATCCCACCGACTGGATAAATGTTCAAGATAGACCCAATGATGTGGAATCTCTGGTCAGGAAGTGCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161327.8 |
||
| CDS GCA 90 bp | TCCTCTGCTTCTCTTCAGATAACATGTTTTCTTGGACAGACATCATaGTTGTCTCCATTGCGGAATCCAGTCTTCCTTCATCTGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSASLQITCFLGQTS*LSPLRNPVFLHLPS Trigger: AGACGGCAGATGAAGGAAGACTGGATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAGAAAACATGTTATCTGAAGAGAAGCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS TCA 90 bp | TTTATCCAGTCGGTGGGATCTGGAGCTACATGCTCCATTGACTTGTaGAATGAGGTTACCAAGGATGTGTTCGTTGTTCTAGGCATATCA | + |
|
Preference number: 5 (lower is better) Translates to: FIQSVGSGATCSIDL*NEVTKDVFVVLGIS Trigger: TGATATGCCTAGAACAACGAACACATCCTTGGTAACCTCATTTCACAAGTCAATGGAGCATGTAGCTCCAGATCCCACCGACTGGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161327.8 |
||
| CDS GCA 90 bp | TCCAAACTTTGTGCTGCTTTTACCAAATTATGTAGGGCAAGTACATaGTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGGACCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLCAAFTKLCRAST*WCRGSKSQSKGTLR Trigger: CCTCAGGGTCCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCCCTACATAATTTGGTAAAAGCAGCACAAAGTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS CCA 90 bp | TCTAGGAGCATGATCCTCTGCTTCTCTTCAGATAACATGTTTTCTTaGACAGACATCATGCTTGTCTCCATTGCGGAATCCAGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSMILCFSSDNMFS*TDIMLVSIAESSLP Trigger: AGGAAGACTGGATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAGAAAACATGTTATCTGAAGAGAAGCAGAGGATCATGCTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACACTGCAAGCTGTGTCCTaGAAGCAACAGTGTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTLQAVS*KQQCGK Trigger: TTTTCCACACTGTTGCTTCAAGGACACAGCTTGCAG...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCGAACAGTCCTCCAGATaGGCCATGATTGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLVTIQLMFINRQLMRLVEQSSR*AMIAAQ Trigger: CTGGGCTGCAATCATGGCCAATCTGGAGGACTGTTC...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAGTTGTTTTCCGTCTTaGACTAAAGCACCAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTSCFPS*TKAPAH Trigger: GTGGGCTGGTGCTTTAGTCAAAGACGGAAAACAACT...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATAGCTTGGTGAACAGGTaGTTCTGTGTTTGGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLQMLECCIYRHEPGIYSLVNR*FCVWMG Trigger: TCCCATCCAAACACAGAACAACCTGTTCACCAAGCT...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR CAA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTTTCTATTTCATATGCTaGGCGATGCAAAGATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: INRQLMRLVTSHSAGSALFYFIC*AMQRCN Trigger: GTTACATCTTTGCATCGCCAAGCATATGAAATAGAA...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAGTTCCGCAACTAAGCTaGAAGAATCTTCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTVPQLS*KNLLWL Trigger: CAGCCAGAGAAGATTCTTCAAGCTTAGTTGCGGAAC...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | ATTAACAGGCAACTAATGAGGCTAGTCACAAGCCACAGTGCAGGCTCTGCCCTTCTCTTGTTCTTCAAGTaGTTCCAGAAACTTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: INRQLMRLVTSHSAGSALLLFFK*FQKLSF Trigger: AAAGCTAAGTTTCTGGAACAACTTGAAGAACAAGAG...AAGGGCAGAGCCTGCACTGTGGCTTGTGACTAGCCTCATTAGTTGCCTGTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGGCACCTGAAGCTGGTTaGAGATCCAGGGCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEAPEAG*RSRAGR Trigger: TCTTCCTGCCCTGGATCTCAAACCAGCTTCAGGTGC...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159530.2 |
||
| CDS TCA 90 bp | AAAGAAGTTTTTGGTATGAATTTGAACAGTCCTCCAGATTGGCCATaGTTGCAGCCCAGCCTTGGTGCTGAAGATGTTCATCATGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: KEVFGMNLNSPPDWP*LQPSLGAEDVHHGQ Trigger: TTGTCCATGATGAACATCTTCAGCACCAAGGCTGGGCTGCAATCATGGCCAATCTGGAGGACTGTTCAAATTCATACCAAAAACTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS TCA 90 bp | AGGAGAGAGCACCAGTTCAGTAGATCTTTTCATCTCAGCTTTCTCTaGGCCTTCATGTTCATTCAAAGAATCCGGTCTTCCCAAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: RREHQFSRSFHLSFL*AFMFIQRIRSSQTF Trigger: GAATGTTTGGGAAGACCGGATTCTTTGAATGAACATGAAGGCTCAGAGAAAGCTGAGATGAAAAGATCTACTGAACTGGTGCTCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS TCA 90 bp | GACTCAGGGCTTTCTGCTAATGAATCCAAGTCTATAGAAGCTTGGTaGACAGGTTGTTCTGTGTTTGGATGGGAGATGGTTTCGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: DSGLSANESKSIEAW*TGCSVFGWEMVSKS Trigger: TGATTTCGAAACCATCTCCCATCCAAACACAGAACAACCTGTTCACCAAGCTTCTATAGACTTGGATTCATTAGCAGAAAGCCCTGAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS CCA 90 bp | CATTCAAAGAATCCGGTCTTCCCAAACATTCCCTGTAACTATGTCTaGTTAGGCACTCCAATAGTGGAATCTTGGCCATTACTGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HSKNPVFPNIPCNYV*LGTPIVESWPLLKQ Trigger: CTGTTTCAGTAATGGCCAAGATTCCACTATTGGAGTGCCTAACCAGACATAGTTACAGGGAATGTTTGGGAAGACCGGATTCTTTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCTTCAAATGCTTGAGTGCTGCATTTATAGGCATGAGCCAGGCATATATAAAGAAAAATTGGATTaGTGTCCGTCCCAGCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQMLECCIYRHEPGIYKEKLD*CPSQRC Trigger: ACAGCGCTGGGACGGACACAAATCCAATTTTTCTTT...ATATATGCCTGGCTCATGCCTATAAATGCAGCACTCAAGCATTTGAAGCAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGGCTCTGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTCAGGTTGTTCTGTGTTaGGATGGGAGATGGTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SAGSALGKHLFWSEFLVIQVVLC*DGRWFR Trigger: TCGAAACCATCTCCCATCCAAACACAGAACAACCTG...AATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCAGAGCCTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACACAACTCCTGCAGCTGTaGCTCTTTTTCCTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTQLLQL*LFFLNS Trigger: ACTATTCAGGAAAAAGAGCAACAGCTGCAGGAGTTG...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS CCA 90 bp | ACGTCATACATTTCCACTGCAAGCTGTGTCCTTGAAGCAACAGTGTaGAAAACTGCAGGCATCATAAGAGACTCTTCAACTTTTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSYISTASCVLEATV*KTAGIIRDSSTFIS Trigger: GGAAATAAAAGTTGAAGAGTCTCTTATGATGCCTGCAGTTTTCCACACTGTTGCTTCAAGGACACAGCTTGCAGTGGAAATGTATGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000160871.8 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS CCA 90 bp | AAACTTTGTGCTGCTTTTACCAAATTATGTAGGGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCACAAAGTAAGGGGACCCTGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KLCAAFTKLCRASTC*CRGSKSQSKGTLRN Trigger: ATTCCTCAGGGTCCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCCCTACATAATTTGGTAAAAGCAGCACAAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACTGGCACAGATCGTCCTaGATGGTTTGTATACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPWKTSILVRISSYLGGNWHRSS*MVCILL Trigger: CAGCAGTATACAAACCATCAAGGACGATCTGTGCCA...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCGCTCTTGCTGCTGCATaGTACTTTTTAGCTTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFALAAA*YFLAYH Trigger: GTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGC...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAGCTCTTGCTGCTGCATaGTACTTTTTAGCTTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTALAAA*YFLAYH Trigger: GTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGC...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAACAATGGCCAGCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAATCTTTATCCCGCTCTaGCTGCTGCATTGTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTQQWPAVFRVVYQHWRTIFIPL*LLHCTF Trigger: AAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGAT...TGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGCTGGCCATTGTTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGGACAGACATCATGCTaGTCTCCATTGCGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIGQTSC*SPLRNP Trigger: TGGATTCCGCAATGGAGACAAGCATGATGTCTGTCC...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGGGACAGACATCATGCTaGTCTCCATTGCGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMGQTSC*SPLRNP Trigger: TGGATTCCGCAATGGAGACAAGCATGATGTCTGTCC...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS GCA 90 bp | TCTTCTTCTTTCAACTGCAATGTCCGTTCTAGGAGCATGATCCTCTaGTTCTCTTCAGATAACATGTTTTCTTGGACAGACATCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSFNCNVRSRSMIL*FSSDNMFSWTDIML Trigger: AAGCATGATGTCTGTCCAAGAAAACATGTTATCTGAAGAGAAGCAGAGGATCATGCTCCTAGAACGGACATTGCAGTTGAAAGAAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
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| CDS CCA 90 bp | GAAGTTTCTCTTGAAGTTCCGCAACTAAGCTTGAAGAATCTTCTCTaGCTGACTCAAAGGCAGGAGTTTTGGCTATTTGATTCTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EVSLEVPQLSLKNLL*LTQRQEFWLFDSQD Trigger: ATCTTGAGAATCAAATAGCCAAAACTCCTGCCTTTGAGTCAGCCAGAGAAGATTCTTCAAGCTTAGTTGCGGAACTTCAAGAGAAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGCTGCAAGCTGTGTCCTaGAAGCAACAGTGTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMLQAVS*KQQCGK Trigger: TTTTCCACACTGTTGCTTCAAGGACACAGCTTGCAG...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGAGCTTGGTGAACAGGTaGTTCTGTGTTTGGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMSLVNR*FCVWMG Trigger: TCCCATCCAAACACAGAACAACCTGTTCACCAAGCT...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTTGGCACAGATCGTCCTaGATGGTTTGTATACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIWHRSS*MVCILL Trigger: CAGCAGTATACAAACCATCAAGGACGATCTGTGCCA...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGGTTCCGCAACTAAGCTaGAAGAATCTTCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEVPQLS*KNLLWL Trigger: CAGCCAGAGAAGATTCTTCAAGCTTAGTTGCGGAAC...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCTGTGGCATCTTTATCCCGCTCTaGCTGCTGCATTGTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: STGGQIKNGMRCRDFFCGIFIPL*LLHCTF Trigger: AAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGAT...GCCACAGAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCGGACAGACATCATGCTaGTCTCCATTGCGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FISTGGQIKNGMRCRDFFGQTSC*SPLRNP Trigger: TGGATTCCGCAATGGAGACAAGCATGATGTCTGTCC...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS TCA 90 bp | GGTTGTTCTGTGTTTGGATGGGAGATGGTTTCGAAATCAAATGTATaGGCATCGATACTATCTGGAGATAATTCTTCTAAGGGACACACT | + |
|
Preference number: 5 (lower is better) Translates to: GCSVFGWEMVSKSNV*ASILSGDNSSKGHT Trigger: AGTGTGTCCCTTAGAAGAATTATCTCCAGATAGTATCGATGCTCATACATTTGATTTCGAAACCATCTCCCATCCAAACACAGAACAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS GCA 90 bp | CGGTCCTCAGAGAGCGACTCTATCAAATCTTTATCCCGCTCTTGCTaGTGCATTGTACTTTTTAGCTTATCACTAAGATCATTTATTATG | + |
|
Preference number: 5 (lower is better) Translates to: RSSESDSIKSLSRSC*CIVLFSLSLRSFIM Trigger: CATAATAAATGATCTTAGTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGATTTGATAGAGTCGCTCTCTGAGGACCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGAAAGAGCAGAGCTTCTaGGCAACGTCATACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKNMLKSARTLEFTRGQMKEQSF*ATSYIS Trigger: GGAAATGTATGACGTTGCCAAGAAGCTCTGCTCTTT...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTGGAAAACATCTATTTTGGTCCGAATTTCTAGTTATTTGGGTGGAAACTCCAATAGTGGAATCTaGGCCATTACTGAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPWKTSILVRISSYLGGNSNSGI*AITETA Trigger: TGCTGTTTCAGTAATGGCCAAGATTCCACTATTGGA...GTTTCCACCCAAATAACTAGAAATTCGGACCAAAATAGATGTTTTCCAAGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATTTGCTAGCTCTTGTTaGGCAGTGGTGCACTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QMLVTTLVTIQLMFINRQFASSC*AVVHFC Trigger: ACAGAAGTGCACCACTGCCAAACAAGAGCTAGCAAA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCAGTTGTTTTCCGTCTTaGACTAAAGCACCAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FISTGGQIKNGMRCRDFFSCFPS*TKAPAH Trigger: GTGGGCTGGTGCTTTAGTCAAAGACGGAAAACAACT...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGATCGTCCTTGATGGTTaGTATACTGCTGTGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMIVLDG*YTAVRV Trigger: GACTCTCACAGCAGTATACAAACCATCAAGGACGAT...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTATCGTCCTTGATGGTTaGTATACTGCTGTGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIIVLDG*YTAVRV Trigger: GACTCTCACAGCAGTATACAAACCATCAAGGACGAT...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGCTTCTGATCCTTTTCTaGCTGCACACAGACAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVFRVVYQHWRTNQKWYELLILF*LHTDNS Trigger: GCTATTGTCTGTGTGCAGCAAGAAAAGGATCAGAAG...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGCTTCTGATCCTTTTCTaGCTGCACACAGACAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMLLILF*LHTDNS Trigger: GCTATTGTCTGTGTGCAGCAAGAAAAGGATCAGAAG...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGCTTCTGATCCTTTTCTaGCTGCACACAGACAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLLLILF*LHTDNS Trigger: GCTATTGTCTGTGTGCAGCAAGAAAAGGATCAGAAG...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTCAACTCCTGCAGCTGTaGCTCTTTTTCCTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLRCSHLKGKCSPPMKYIQLLQL*LFFLNS Trigger: ACTATTCAGGAAAAAGAGCAACAGCTGCAGGAGTTG...AATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCTTAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGACTCAACTCCTGCAGCTGTaGCTCTTTTTCCTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLKGKCSPPMKYIVMLTQLLQL*LFFLNS Trigger: ACTATTCAGGAAAAAGAGCAACAGCTGCAGGAGTTG...AGTCAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATTGACCAGTCTCTCCTaGTCTTTCTCAAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QMLVTTLVTIQLMFINRQLTSLS*SFSRFW Trigger: CCAGAACCTTGAGAAAGACAAGGAGAGACTGGTCAA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCTTTTAAACCTTGAGTTTACATGGTTCTGTTCCACAGAACACCACTTCCTCTTGTTCTTCAAGTaGTTCCAGAAACTTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CQLLNLEFTWFCSTEHHFLLFFK*FQKLSF Trigger: AAAGCTAAGTTTCTGGAACAACTTGAAGAACAAGAG...GAAGTGGTGTTCTGTGGAACAGAACCATGTAAACTCAAGGTTTAAAAGCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS GCA 90 bp | AAGTTTTCGGTCTCTTGTTCAAGTAAAGACTTCAGCATTTCCTTCTaGTGTGTTCTGCTCTCTTCCAACAAGATCTTTATCTCATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KFSVSCSSKDFSISF*CVLLSSNKIFISSV Trigger: AACAGATGAGATAAAGATCTTGTTGGAAGAGAGCAGAACACAGCAGAAGGAAATGCTGAAGTCTTTACTTGAACAAGAGACCGAAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTCCAATAGTGGAATCTaGGCCATTACTGAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMSNSGI*AITETA Trigger: TGCTGTTTCAGTAATGGCCAAGATTCCACTATTGGA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCTTGCTGGACAGTACTTaGACAAGATTCCCTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLVTIQLMFINRQLMRLVLLDST*TRFPKF Trigger: GAACTTAGGGAATCTTGTCAAAGTACTGTCCAGCAA...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027040.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAACATGTTAAAGAGTGCGAGGACTCTTGAATTCACAAGAGGACAAATGGTTTTTGGTATGAATTaGAACAGTCCTCCAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: IKNMLKSARTLEFTRGQMVFGMN*NSPPDW Trigger: CCAATCTGGAGGACTGTTCAAATTCATACCAAAAAC...CATTTGTCCTCTTGTGAATTCAAGAGTCCTCGCACTCTTTAACATGTTCTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGATGTAGAGATTTCTTCATCTTTATCCCGCTCTaGCTGCTGCATTGTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FISTGGQIKNGMRCRDFFIFIPL*LLHCTF Trigger: AAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGAT...GAAGAAATCTCTACATCTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS GCA 90 bp | TCCTCAGAGAGCGACTCTATCAAATCTTTATCCCGCTCTTGCTGCTaGATTGTACTTTTTAGCTTATCACTAAGATCATTTATTATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSESDSIKSLSRSCC*IVLFSLSLRSFIMF Trigger: AAACATAATAAATGATCTTAGTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGATTTGATAGAGTCGCTCTCTGAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAAGTTTTTGGTATGAATTaGAACAGTCCTCCAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QMLVTTLVTIQLMFINRQVFGMN*NSPPDW Trigger: CCAATCTGGAGGACTGTTCAAATTCATACCAAAAAC...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAACTAATGAGGCTAGTCTTCTCCAAAGACATATaGTGGTCTGTCATAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLVTIQLMFINRQLMRLVFSKDI*WSVITF Trigger: GAAAGTTATGACAGACCACAATATGTCTTTGGAGAA...GACTAGCCTCATTAGTTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGTTCTCCAAAGACATATaGTGGTCTGTCATAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLFSKDI*WSVITF Trigger: GAAAGTTATGACAGACCACAATATGTCTTTGGAGAA...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTTTTTAGAGTAGTTTATCAGCACTGGAGGACAAATCAAAAATGGTATGAGTTCTATTTCATATGCTaGGCGATGCAAAGATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVFRVVYQHWRTNQKWYEFYFIC*AMQRCN Trigger: GTTACATCTTTGCATCGCCAAGCATATGAAATAGAA...CTCATACCATTTTTGATTTGTCCTCCAGTGCTGATAAACTACTCTAAAAACAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTCTATTTCATATGCTaGGCGATGCAAAGATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RCSHLKGKCSPPMKYIVMFYFIC*AMQRCN Trigger: GTTACATCTTTGCATCGCCAAGCATATGAAATAGAA...CATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCCACTTAAAAGGTAAGTGCAGTCCACCAATGAAGTATATTGTTATGTTGCTCTTGTTCTTCAAGTaGTTCCAGAAACTTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSHLKGKCSPPMKYIVMLLLFFK*FQKLSF Trigger: AAAGCTAAGTTTCTGGAACAACTTGAAGAACAAGAG...CAACATAACAATATACTTCATTGGTGGACTGCACTTACCTTTTAAGTGGCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCTGGTAACAACACTGGTAACTATTCAGCTAATGTTTATTAACAGGCAATTCTCCAAAGACATATaGTGGTCTGTCATAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QMLVTTLVTIQLMFINRQFSKDI*WSVITF Trigger: GAAAGTTATGACAGACCACAATATGTCTTTGGAGAA...TTGCCTGTTAATAAACATTAGCTGAATAGTTACCAGTGTTGTTACCAGCATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS TCA 72 bp | CGCACCATAGAGCTCTGGGGCTGCAGCCACAGGTGCTaGGGAAAGAAAACTGCTAGTGCGGAGTTTACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTIELWGCSHRC*GKKTASAEFTH Trigger: GTGAGTAAACTCCGCACTAGCAGTTTTCTTTCCTCAGCACCTGTGGCTGCAGCCCCAGAGCTCTATGGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS TCA 72 bp | TGGCACAGATCGTCCTTGATGGTTTGTATACTGCTGTaGGAGTCTTGTGCAGCAGCTCTGCATTTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WHRSSLMVCILL*ESCAAALHFSS Trigger: GCTGGAGAAATGCAGAGCTGCTGCACAAGACTCTCACAGCAGTATACAAACCATCAAGGACGATCTGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS GCA 72 bp | TTTGTATACTGCTGTGAGAGTCTTGTGCAGCAGCTCTaGATTTCTCCAGCTGGACATGTAGAGCAGCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: FVYCCESLVQQL*ISPAGHVEQPD Trigger: ATCGGGCTGCTCTACATGTCCAGCTGGAGAAATGCAGAGCTGCTGCACAAGACTCTCACAGCAGTATACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS GCA 72 bp | CTGCTAGTGCGGAGTTTACTCACTTCCTCTTCAAGCTaGTTCTTCTCTTCAAGCAAACGAGCTCGGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLVRSLLTSSSS*FFSSSKRARSS Trigger: TGAGGACCGAGCTCGTTTGCTTGAAGAGAAGAAGCAGCTTGAAGAGGAAGTGAGTAAACTCCGCACTAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS CCA 72 bp | TGTTCATTTACCAGCCGGCTACAGCTAGCAATCATCTaGTCCAAGGCATACAGCCGATCTTCAAGCCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: CSFTSRLQLAII*SKAYSRSSSPL Trigger: TAAAGGGCTTGAAGATCGGCTGTATGCCTTGGACCAGATGATTGCTAGCTGTAGCCGGCTGGTAAATGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS CAA 72 bp | ATCGTCCTTGATGGTTTGTATACTGCTGTGAGAGTCTaGTGCAGCAGCTCTGCATTTCTCCAGCTGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: IVLDGLYTAVRV*CSSSAFLQLDM Trigger: CATGTCCAGCTGGAGAAATGCAGAGCTGCTGCACAAGACTCTCACAGCAGTATACAAACCATCAAGGACGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS TCA 72 bp | CCGGTGGGATCTGGAGCTACATGCTCCATTGACTTGTaGAATGAGGTTACCAAGGATGTGTTCGTTGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PVGSGATCSIDL*NEVTKDVFVVL Trigger: TAGAACAACGAACACATCCTTGGTAACCTCATTTCACAAGTCAATGGAGCATGTAGCTCCAGATCCCACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000162795.8 |
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| CDS GCA 72 bp | CATGTTTTCTTGGACAGACATCATGCTTGTCTCCATTaGGGAATCCAGTCTTCCTTCATCTGCCGTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HVFLDRHHACLH*GIQSSFICRLH Trigger: ATGGAGACGGCAGATGAAGGAAGACTGGATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAGAAAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
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| CDS CAA 90 bp | TCTGCTTCTCTTCAGATAACATGTTTTCTTGGACAGACATCATGCTaGTCTCCATTGCGGAATCCAGTCTTCCTTCATCTGCCGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SASLQITCFLGQTSC*SPLRNPVFLHLPSP Trigger: TGGAGACGGCAGATGAAGGAAGACTGGATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAGAAAACATGTTATCTGAAGAGAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
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| CDS TCA 72 bp | AATGCCTGTTGTACTTTCTATTCTTGGAGAAGCAGCTaGCTGTGGGGATGCCTGACTTGTGGATACCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NACCTFYSWRSS*LWGCLTCGYLL Trigger: CAAAAGGTATCCACAAGTCAGGCATCCCCACAGTCAGCTGCTTCTCCAAGAATAGAAAGTACAACAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS TCA 72 bp | TCGGTGGGATCTGGAGCTACATGCTCCATTGACTTGTaGAATGAGGTTACCAAGGATGTGTTCGTTGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SVGSGATCSIDL*NEVTKDVFVVL Trigger: TAGAACAACGAACACATCCTTGGTAACCTCATTTCACAAGTCAATGGAGCATGTAGCTCCAGATCCCACCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161327.8 |
||
| CDS CAA 72 bp | ATCACAAAACAACACCACTTCAGTCTGACGTGGAGATaGTTTGCTAGCTCTTGTTTGGCAGTGGTGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ITKQHHFSLTWR*FASSCLAVVHF Trigger: GAAGTGCACCACTGCCAAACAAGAGCTAGCAAACAATCTCCACGTCAGACTGAAGTGGTGTTGTTTTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 |
||
| CDS TCA 72 bp | GCATCCACTGAAGCTTCTTCTTGCTGGACAGTACTTTaGCAAGATTCCCTAAGTTCTTTGCCACGTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ASTEASSCWTVL*QDSLSSLPRSV Trigger: TACTGAACGTGGCAAAGAACTTAGGGAATCTTGTCAAAGTACTGTCCAGCAAGAAGAAGCTTCAGTGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027040.13 ENSMUST00000162795.8 |
||
| CDS CCA 72 bp | ATTTCCACTGCAAGCTGTGTCCTTGAAGCAACAGTGTaGAAAACTGCAGGCATCATAAGAGACTCTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: ISTASCVLEATV*KTAGIIRDSST Trigger: AGTTGAAGAGTCTCTTATGATGCCTGCAGTTTTCCACACTGTTGCTTCAAGGACACAGCTTGCAGTGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000160871.8 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS CCA 72 bp | AATCCGGTCTTCCCAAACATTCCCTGTAACTATGTCTaGTTAGGCACTCCAATAGTGGAATCTTGGCCATTA | + |
|
Preference number: 6 (lower is better) Translates to: NPVFPNIPCNYV*LGTPIVESWPL Trigger: TAATGGCCAAGATTCCACTATTGGAGTGCCTAACCAGACATAGTTACAGGGAATGTTTGGGAAGACCGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS CCA 72 bp | GCTGCTTTTACCAAATTATGTAGGGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCACAAAGTAAGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: AAFTKLCRASTC*CRGSKSQSKGT Trigger: GGTCCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCCCTACATAATTTGGTAAAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS CAA 72 bp | TCTTTGTCTTGCTCGTGGTTCTTGACCAGTCTCTCCTaGTCTTTCTCAAGGTTCTGGATAAGTGCTTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSCSWFLTSLS*SFSRFWISASY Trigger: GTATGAAGCACTTATCCAGAACCTTGAGAAAGACAAGGAGAGACTGGTCAAGAACCACGAGCAAGACAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS CAA 72 bp | CTTCTTGAAGTTTCTCTTGAAGTTCCGCAACTAAGCTaGAAGAATCTTCTCTGGCTGACTCAAAGGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLEVSLEVPQLS*KNLLWLTQRQE Trigger: CTCCTGCCTTTGAGTCAGCCAGAGAAGATTCTTCAAGCTTAGTTGCGGAACTTCAAGAGAAACTTCAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS GCA 72 bp | TTCAACTGCAATGTCCGTTCTAGGAGCATGATCCTCTaGTTCTCTTCAGATAACATGTTTTCTTGGACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FNCNVRSRSMIL*FSSDNMFSWTD Trigger: GTCTGTCCAAGAAAACATGTTATCTGAAGAGAAGCAGAGGATCATGCTCCTAGAACGGACATTGCAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS CCA 72 bp | CTTGAAGTTCCGCAACTAAGCTTGAAGAATCTTCTCTaGCTGACTCAAAGGCAGGAGTTTTGGCTATTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEVPQLSLKNLL*LTQRQEFWLFD Trigger: ATCAAATAGCCAAAACTCCTGCCTTTGAGTCAGCCAGAGAAGATTCTTCAAGCTTAGTTGCGGAACTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS CCA 72 bp | ATGATCCTCTGCTTCTCTTCAGATAACATGTTTTCTTaGACAGACATCATGCTTGTCTCCATTGCGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: MILCFSSDNMFS*TDIMLVSIAES Trigger: GGATTCCGCAATGGAGACAAGCATGATGTCTGTCCAAGAAAACATGTTATCTGAAGAGAAGCAGAGGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS CAA 72 bp | CAGAACCTGGTGCTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGATCAGCCACAGTTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QNLVLNSNLVFA*NGMLKISHSLH Trigger: GTGCAAACTGTGGCTGATCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAGCACCAGGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027040.13 ENSMUST00000159906.8 ENSMUST00000160871.8 ENSMUST00000162795.8 |
||
| CDS TCA 72 bp | CTTCTTACAACCTCAACAACAGCTAGGCAATACATCTaGGGAACTGTACTAAGAGCCTCAACAATTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LLTTSTTARQYI*GTVLRASTILT Trigger: AGTCAGAATTGTTGAGGCTCTTAGTACAGTTCCTCAGATGTATTGCCTAGCTGTTGTTGAGGTTGTAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS TCA 72 bp | CTTTCTGCTAATGAATCCAAGTCTATAGAAGCTTGGTaGACAGGTTGTTCTGTGTTTGGATGGGAGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSANESKSIEAW*TGCSVFGWEMV Trigger: AACCATCTCCCATCCAAACACAGAACAACCTGTTCACCAAGCTTCTATAGACTTGGATTCATTAGCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS CCA 72 bp | GTCTATAGAAGCTTGGTGAACAGGTTGTTCTGTGTTTaGATGGGAGATGGTTTCGAAATCAAATGTATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VYRSLVNRLFCV*MGDGFEIKCMS Trigger: GCTCATACATTTGATTTCGAAACCATCTCCCATCCAAACACAGAACAACCTGTTCACCAAGCTTCTATAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
||
| CDS TCA 72 bp | CTTCTTCTTTCAACTGCAATGTCCGTTCTAGGAGCATaGTCCTCTGCTTCTCTTCAGATAACATGTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLSTAMSVLGA*SSASLQITCFL Trigger: AAGAAAACATGTTATCTGAAGAGAAGCAGAGGATCATGCTCCTAGAACGGACATTGCAGTTGAAAGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000159530.2 ENSMUST00000161327.8 |
||
| CDS GCA 72 bp | GAGAGCGACTCTATCAAATCTTTATCCCGCTCTTGCTaGTGCATTGTACTTTTTAGCTTATCACTAAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: ESDSIKSLSRSC*CIVLFSLSLRS Trigger: TGATCTTAGTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGATTTGATAGAGTCGCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
||
| CDS GCA 72 bp | TCAGAGAGCGACTCTATCAAATCTTTATCCCGCTCTTaGTGCTGCATTGTACTTTTTAGCTTATCACTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SESDSIKSLSRS*CCIVLFSLSLR Trigger: TCTTAGTGATAAGCTAAAAAGTACAATGCAGCAGCAAGAGCGGGATAAAGATTTGATAGAGTCGCTCTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162257.8 |
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| CDS CCA 72 bp | AAGTCACACTGTTCTTTTTGTACAAATGTTCTGAAATaGCACAGATCGTCCTTGATGGTTTGTATACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: KSHCSFCTNVLK*HRSSLMVCILL Trigger: CAGCAGTATACAAACCATCAAGGACGATCTGTGCCATTTCAGAACATTTGTACAAAAAGAACAGTGTGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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| CDS TCA 72 bp | GTGTTTGGATGGGAGATGGTTTCGAAATCAAATGTATaGGCATCGATACTATCTGGAGATAATTCTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: VFGWEMVSKSNV*ASILSGDNSSK Trigger: CTTAGAAGAATTATCTCCAGATAGTATCGATGCTCATACATTTGATTTCGAAACCATCTCCCATCCAAACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027040.13 ENSMUST00000161327.8 ENSMUST00000162795.8 |
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