Pregenerated sensors for RB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022105Ensembl transcript IDs: ENSMUST00000022701.7, ENSMUST00000164624.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTATCCGAGCGCTCCTGTTCTGACCTCTTCTGGGTGTTCGAGGTaGACCATTAATGGGGATTGCAGCTGTTTTGTATGGCTCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: CYPSAPVLTSSGCSR*TINGDCSCFVWLSE Trigger: CTCAGAGAGCCATACAAAACAGCTGCAATCCCCATTAATGGTTCACCTCGAACACCCAGAAGAGGTCAGAACAGGAGCGCTCGGATAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164624.2 |
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| 3UTR CCA 90 bp | TCAGCTTGTACCTGCACATTTTATATCTCTAACATGAGCAGAACCTaGGAACTAGTCACAACCATGAGCCAGGAGTCTGGTGTCCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SACTCTFYISNMSRT*ELVTTMSQESGVPR Trigger: CCTGGGGACACCAGACTCCTGGCTCATGGTTGTGACTAGTTCCCAGGTTCTGCTCATGTTAGAGATATAAAATGTGCAGGTACAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR GCA 90 bp | TCATATTTTAAATGGCATGATCTGCACAAGATTCTCAATCCTGTGTaGTATCAATTCTCTACCATTGATTACAACATTGAAGTGGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: SYFKWHDLHKILNPV*YQFSTIDYNIEVAY Trigger: GTAAGCCACTTCAATGTTGTAATCAATGGTAGAGAATTGATAGCACACAGGATTGAGAATCTTGTGCAGATCATGCCATTTAAAATATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR CCA 90 bp | TCCCAGTTTGTAACAATCTGTTTCAGTAGAAGATTCAAGATAATTTaGTTGAATGTGGACAGTCAATCAACTTGCATTTGGAAGACAAGA | + |
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Preference number: 1 (lower is better) Translates to: SQFVTICFSRRFKII*LNVDSQSTCIWKTR Trigger: TCTTGTCTTCCAAATGCAAGTTGATTGACTGTCCACATTCAACCAAATTATCTTGAATCTTCTACTGAAACAGATTGTTACAAACTGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCGGCTCATGTTGGAAATaGAAACAACTTGCTTTCATA | + |
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Preference number: 2 (lower is better) Translates to: EERQSSQPDVGGQDPCRGGSCWK*KQLAFI Trigger: TATGAAAGCAAGTTGTTTGCATTTCCAACATGAGCC...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR CAA 90 bp | CTTCTGGGTGTTCGAGGTGAACCATTAATGGGGATTGCAGCTGTTTaGTATGGCTCTCTGAGTAGTGCAGGAGGTGAGAACTTAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: LLGVRGEPLMGIAAV*YGSLSSAGGENLIK Trigger: TTTTATTAAGTTCTCACCTCCTGCACTACTCAGAGAGCCATACAAAACAGCTGCAATCCCCATTAATGGTTCACCTCGAACACCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164624.2 |
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| 3UTR CAA 90 bp | ATCTTGATTCTTCAGGACCCAGAAACATTAAAAAGTGCACTTGGGTaGTACTGTACTAGGGTCCTCTTAAGCACAGTTGTGGCCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: ILILQDPETLKSALG*YCTRVLLSTVVAKL Trigger: AAGTTTGGCCACAACTGTGCTTAAGAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTGAAGAATCAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCGTTCAAAGCATGTGTTaGGTGAATAAAAGAATCGGT | + |
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Preference number: 2 (lower is better) Translates to: QDPETLKSALGLYCTRVLVQSMC*VNKRIG Trigger: ACCGATTCTTTTATTCACCCAACACATGCTTTGAAC...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATAAATACACCTTTAGGTaGGGGGTGAAGGGAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYKYTFR*GVKGVP Trigger: AGGCACTCCCTTCACCCCCCACCTAAAGGTGTATTT...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR TCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATGCAGCTGTTTTCATCTaGAGTTTCTGCACAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYAAVFI*SFCTAG Trigger: TCCAGCTGTGCAGAAACTTCAGATGAAAACAGCTGC...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR GCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATCAAACATCACACATGTaGCATGAGGAAAGGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYQTSHM*HEERQS Trigger: ACTTTGCCTTTCCTCATGGCACATGTGTGATGTTTG...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR GCA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGAGAAACATTAAAAAGTaGACTTGGGTTGTACTGTAC | + |
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Preference number: 2 (lower is better) Translates to: KMYHSRENTNIPRCRRTERNIKK*TWVVLY Trigger: GTACAGTACAACCCAAGTGCACTTTTTAATGTTTCT...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR CCA 90 bp | CTAATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATTACAACATTGAAGTaGCTTACGAATCACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LICVMIMQNLMKKWGKLSITTLK*LTNHPH Trigger: GTGTGGGTGATTCGTAAGCCACTTCAATGTTGTAAT...AGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATCAATCAACTTGCATTTaGAAGACAAGACACATTTTC | + |
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Preference number: 2 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYQSTCI*KTRHIF Trigger: GAAAATGTGTCTTGTCTTCCAAATGCAAGTTGATTG...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR TCA 72 bp | AGCGCTCCTGTTCTGACCTCTTCTGGGTGTTCGAGGTaGACCATTAATGGGGATTGCAGCTGTTTTGTATGG | + |
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Preference number: 3 (lower is better) Translates to: SAPVLTSSGCSR*TINGDCSCFVW Trigger: CCATACAAAACAGCTGCAATCCCCATTAATGGTTCACCTCGAACACCCAGAAGAGGTCAGAACAGGAGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164624.2 |
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| 3UTR TCA 72 bp | TTTTCTAGTTGTTTTGCTATCCGAGCGCTCCTGTTCTaGCCTCTTCTGGGTGTTCGAGGTGAACCATTAATG | + |
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Preference number: 3 (lower is better) Translates to: FSSCFAIRALLF*PLLGVRGEPLM Trigger: CATTAATGGTTCACCTCGAACACCCAGAAGAGGTCAGAACAGGAGCGCTCGGATAGCAAAACAACTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164624.2 |
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| 3UTR-3UTR CAA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGGGACAGTCAATCAACTaGCATTTGGAAGACAAGACA | + |
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Preference number: 3 (lower is better) Translates to: KMYHSRENTNIPRCRRTEGQSIN*HLEDKT Trigger: TGTCTTGTCTTCCAAATGCAAGTTGATTGACTGTCC...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAACTGAGTATGGAAGGCTaGGGCTGCTTGTGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKLSMEG*GCLCLC Trigger: ACAGAGACACAAGCAGCCTCAGCCTTCCATACTCAG...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAATCTGGGTGTTCGAGGTaGACCATTAATGGGGATTGC | + |
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Preference number: 4 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKSGCSR*TINGDC Trigger: GCAATCCCCATTAATGGTTCACCTCGAACACCCAGA...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCAATGTGAGGTATTGGTaGCAAGGTAGGAGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: EERQSSQPDVGGQDPCRGNVRYW*QGRRPG Trigger: ACCAGGCCTCCTACCTTGTCACCAATACCTCACATT...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAAGGGCTTCGAGGAATGTaGGGTATTGGTGACAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKGLRGM*GIGDKV Trigger: TACCTTGTCACCAATACCTCACATTCCTCGAAGCCC...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAAATGTTTACTCCCATCTaGTTCATCGGCTCCCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKMFTPI*FIGSLD Trigger: ATCGAGGGAGCCGATGAAGCAGATGGGAGTAAACAT...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCTGTTCTGACCTCTTCTaGGTGTTCGAGGTGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: EERQSSQPDVGGQDPCRGCSDLF*VFEVNH Trigger: ATGGTTCACCTCGAACACCCAGAAGAGGTCAGAACA...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCACCATTAATGGGGATTaGAGCTGTTTTGTATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EERQSSQPDVGGQDPCRGTINGD*SCFVWL Trigger: GAGCCATACAAAACAGCTGCAATCCCCATTAATGGT...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCACACACAACATTAGCTaGAATGAGATTACCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EERQSSQPDVGGQDPCRGTHNIS*NEITRS Trigger: TGACCTGGTAATCTCATTTCAGCTAATGTTGTGTGT...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCCGAGCGCTCCTGTTCTaGCCTCTTCTGGGTGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: QDPETLKSALGLYCTRVLRALLF*PLLGVR Trigger: TCGAACACCCAGAAGAGGTCAGAACAGGAGCGCTCG...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAATTTTGCAATGTATGCTaGAACAGAGTCCAGATGATG | + |
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Preference number: 4 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKFCNVC*NRVQMM Trigger: CATCATCTGGACTCTGTTTCAGCATACATTGCAAAA...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAAGTTCCAGAATCAAGATaGTGCAATGTACTTCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKVPESR*CNVLLL Trigger: TAGCAGAAGTACATTGCAGCATCTTGATTCTGGAAC...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCCTTCAAACTCAAGCCTaGCCAGGGGCAGCTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: QDPETLKSALGLYCTRVLLQTQA*PGAALR Trigger: CCGAAGAGCTGCCCCTGGCCAGGCTTGAGTTTGAAG...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| 3UTR CAA 72 bp | GTTCGAGGTGAACCATTAATGGGGATTGCAGCTGTTTaGTATGGCTCTCTGAGTAGTGCAGGAGGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VRGEPLMGIAAV*YGSLSSAGGEN Trigger: GTTCTCACCTCCTGCACTACTCAGAGAGCCATACAAAACAGCTGCAATCCCCATTAATGGTTCACCTCGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164624.2 |
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| CDS-3UTR TCA 90 bp | AGTGGCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATACCTGGAGAGGCAGGCTaGGAGGACAAGCAGGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: SGLRITHTNIQLVPAHFIPGEAG*EDKQVQ Trigger: TTGAACCTGCTTGTCCTCTCAGCCTGCCTCTCCAGG...TATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCGCAGTATGGTTACCCTaGAGAGGCAGGCTGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AYESPTQIFSLYLHILYLAVWLP*RGRLRG Trigger: TCCTCTCAGCCTGCCTCTCCAGGGTAACCATACTGC...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGATATCTGCTGCAGTATaGTTACCCTGGAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KMYHSRENTNIPRCRRTEISAAV*LPWRGR Trigger: CCTGCCTCTCCAGGGTAACCATACTGCAGCAGATAT...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGGATTTCAATGGCTTCTaGGTATGGAAGGCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KMYHSRENTNIPRCRRTEDFNGF*VWKAEA Trigger: AGCCTCAGCCTTCCATACTCAGAAGCCATTGAAATC...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCAATGTCGGTCTCTCATaGGCTCATACTCATTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: QDPETLKSALGLYCTRVLNVGLS*AHTHFA Trigger: TGCAAAATGAGTATGAGCTCATGAGAGACCGACATT...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCCTCTCATTCATTCTCTaGTTTTGCATTCGTGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: QDPETLKSALGLYCTRVLLSFIL*FCIRVR Trigger: TCGAACACGAATGCAAAAGCAGAGAATGAATGAGAG...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGGTTTCTGTTGGAATTTaGACTCCGCTGGGAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: KMYHSRENTNIPRCRRTEVSVGI*TPLGDV Trigger: AACATCTCCCAGCGGAGTCCAAATTCCAACAGAAAC...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCTCTGCCAGTTTCTGTTaGAATTTGGACTCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AYESPTQIFSLYLHILYLSASFC*NLDSAG Trigger: CCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGA...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCTTCTCTTTAAAGATGTaGCCAACATCCTTTACTCTC | + |
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Preference number: 4 (lower is better) Translates to: QDPETLKSALGLYCTRVLFSLKM*PTSFTL Trigger: GAGAGTAAAGGATGTTGGGCACATCTTTAAAGAGAA...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATAGAGTCCAGATGATGTaGTCTAGCTCTGGGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYRVQMM*SSSGWS Trigger: TGACCACCCAGAGCTAGAGCACATCATCTGGACTCT...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGCCAGAATCAAGATGCTaGAATGTACTTCTGCTATAC | + |
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Preference number: 4 (lower is better) Translates to: KMYHSRENTNIPRCRRTEPESRC*NVLLLY Trigger: GTATAGCAGAAGTACATTGCAGCATCTTGATTCTGG...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR GCA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCGATTCCATGATTCGATaGTCACATCTTTCTAAATGT | + |
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Preference number: 4 (lower is better) Translates to: QDPETLKSALGLYCTRVLDSMIR*SHLSKC Trigger: ACATTTAGAAAGATGTGAGCATCGAATCATGGAATC...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCCATAACAGTCCTAACTaGAGTGTGTGGAGTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: AYESPTQIFSLYLHILYLHNSPN*SVWSNH Trigger: GTGGTTACTCCACACACTCCAGTTAGGACTGTTATG...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATGAATTTGGACTCCGCTaGGAGATGTTTACTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYEFGLR*EMFTPI Trigger: GATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTC...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR CCA 90 bp | AGTGGCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATAGCATTCGTGTTCGAGTaGAAGTCATTTCTGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SGLRITHTNIQLVPAHFIAFVFE*KSFLPV Trigger: AACTGGCAGAAATGACTTCCACTCGAACACGAATGC...TATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | CTAATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTGGAAATCAGATTTTCTaGTGGCTGATCACTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LICVMIMQNLMKKWGKLSGNQIF*WLITCR Trigger: TCTGCAAGTGATCAGCCATCAGAAAATCTGATTTCC...AGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS-3UTR TCA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGCAAACGTTCTTCTTCTaGTTTAAGCATGGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMYHSRENTNIPRCRRTEQTFFF*FKHGFH Trigger: ATGGAATCCATGCTTAAATCAGAAGAAGAACGTTTG...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR TCA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCATGCAAGGGATTCCATaGTTCGATGCTCACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AYESPTQIFSLYLHILYLMQGIP*FDAHIF Trigger: AAAGATGTGAGCATCGAATCATGGAATCCCTTGCAT...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR TCA 90 bp | AGTGGCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATACTTCAGCACTTCTTTTaGGCACTCTGTCACTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLRITHTNIQLVPAHFILQHFF*ALCHYY Trigger: GTAATAGTGACAGAGTGCTCAAAAGAAGTGCTGAAG...TATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR GCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATTGGAGTAACCACGTTTaGCTCTTCATCAGGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYWSNHV*LFIRVV Trigger: AACAACCCTGATGAAGAGGCAAACGTGGTTACTCCA...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR TCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATCTTTTCCTCCTTGTTTaGGACATCCTTGCTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYLFLLV*DILALI Trigger: AATGAGAGCAAGGATGTCTCAAACAAGGAGGAAAAG...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR GCA 90 bp | AGTGGCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATAAGAAAGATACATATCTaGTGCAGTATGGTTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLRITHTNIQLVPAHFIRKIHI*CSMVTL Trigger: CAGGGTAACCATACTGCAGCAGATATGTATCTTTCT...TATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR GCA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATTTCATTCTCTGCTTTTaGATTCGTGTTCGAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYFILCF*IRVRVE Trigger: TTCCACTCGAACACGAATGCAAAAGCAGAGAATGAA...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| 3UTR CAA 72 bp | AATTTGGTTGAATGTGGACAGTCAATCAACTTGCATTaGGAAGACAAGACACATTTTCTAAGGGTATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: NLVECGQSINLH*EDKTHFLRVFT Trigger: CGTGAATACCCTTAGAAAATGTGTCTTGTCTTCCAAATGCAAGTTGATTGACTGTCCACATTCAACCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR GCA 90 bp | AGTGGCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCCATCCTTGGACTaGTTAATGAGATCAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGLRITHTNIQLVPAHFISPSLD*LMRSNK Trigger: TTTATTTGATCTCATTAAGCAGTCCAAGGATGGAGA...TATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGCCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CCA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCATCTGGTTTATTTTCTaGAACTTTTCAGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AYESPTQIFSLYLHILYLIWFIF*NFSDVP Trigger: TGGGACATCTGAAAAGTTCCAGAAAATAAACCAGAT...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCATCTCGGAGTCATTTTaGTGGGTGTTGGCAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: EERQSSQPDVGGQDPCRGISESF*WVLADL Trigger: AAGGTCTGCCAACACCCACAAAAATGACTCCGAGAT...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | TCAGGACCCCTGCAGAGGCCCTCACTTCTGAGGGCAGCAGGCTCATGTTGGAAAAGTTTCTGTTGGAATTaGGACTCCGCTGGGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SGPLQRPSLLRAAGSCWKSFCWN*DSAGRC Trigger: ACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACT...TTTCCAACATGAGCCTGCTGCCCTCAGAAGTGAGGGCCTCTGCAGGGGTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 90 bp | AGTGGAAGTCATTTCTGCCAGTTTCTGTTGGAATTTGGACTCCGCTaGGAGATGTTTACTCCCATCTGCTTCATCGGCTCCCTCGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSHFCQFLLEFGLR*EMFTPICFIGSLDV Trigger: GACATCGAGGGAGCCGATGAAGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAAATGACTTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | GAGGAAAGGCAAAGTAGTCAGCCAGATGTAGGGGGTCAGGACCCCTGCAGAGGCATAGCATTATCAACCTaGGTACTGGTATCGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EERQSSQPDVGGQDPCRGIALST*VLVSIS Trigger: AGAAATCGATACCAGTACCAAGGTTGATAATGCTAT...GCCTCTGCAGGGGTCCTGACCCCCTACATCTGGCTGACTACTTTGCCTTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS TCA 90 bp | AAAGATACATATCTGCTGCAGTATGGTTACCCTGGAGAGGCAGGCTaGGAGGACAAGCAGGTTCAAGGTTATCAGGTCCTTCTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDTYLLQYGYPGEAG*EDKQVQGYQVLLHP Trigger: AGGATGGAGAAGGACCTGATAACCTTGAACCTGCTTGTCCTCTCAGCCTGCCTCTCCAGGGTAACCATACTGCAGCAGATATGTATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 90 bp | CGGACTCCAAGTTTATATCGCTGTACTCCGATGTCAACACAGCCCTaGCCCACAGCGTTAGCAAACTTCTCTTTAAAGATGTGCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RTPSLYRCTPMSTQP*PTALANFSLKMCPT Trigger: TGTTGGGCACATCTTTAAAGAGAAGTTTGCTAACGCTGTGGGCCAGGGCTGTGTTGACATCGGAGTACAGCGATATAAACTTGGAGTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 90 bp | TTCGTGTTCGAGTGGAAGTCATTTCTGCCAGTTTCTGTTGGAATTTaGACTCCGCTGGGAGATGTTTACTCCCATCTGCTTCATCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FVFEWKSFLPVSVGI*TPLGDVYSHLLHRL Trigger: GAGCCGATGAAGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAAATGACTTCCACTCGAACACGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS TCA 90 bp | CAGGGCAAGGGAGGTAGATTTCAATGGCTTCTGAGTATGGAAGGCTaGGGCTGCTTGTGTCTCTGTATTTGCAGCAGAATTTACACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QGKGGRFQWLLSMEG*GCLCLCICSRIYTC Trigger: ACACGTGTAAATTCTGCTGCAAATACAGAGACACAAGCAGCCTCAGCCTTCCATACTCAGAAGCCATTGAAATCTACCTCCCTTGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCTTCTGCCAGTTTCTGTaGGAATTTGGACTCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDPETLKSALGLYCTRVLFCQFL*EFGLRW Trigger: CCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAA...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS TCA 90 bp | AAATGTCGGTCTCTCATGAGCTCATACTCATTTTGCAATGTATGCTaGAACAGAGTCCAGATGATGTGCTCTAGCTCTGGGTGGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KCRSLMSSYSFCNVC*NRVQMMCSSSGWSD Trigger: GTCTGACCACCCAGAGCTAGAGCACATCATCTGGACTCTGTTTCAGCATACATTGCAAAATGAGTATGAGCTCATGAGAGACCGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 90 bp | TTTTGCATTCGTGTTCGAGTGGAAGTCATTTCTGCCAGTTTCTGTTaGAATTTGGACTCCGCTGGGAGATGTTTACTCCCATCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCIRVRVEVISASFC*NLDSAGRCLLPSAS Trigger: TGAAGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAAATGACTTCCACTCGAACACGAATGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCTCGATGTTCTTCACCTaGCAGATGCCATACATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QDPETLKSALGLYCTRVLSMFFT*QMPYIE Trigger: CTCTATGTATGGCATCTGCAAGGTGAAGAACATCGA...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS TCA 90 bp | ACTGCTGCGATAAAGATGCAGATGCCCCAGAGTTCCTTCTTCTTTTaGATATATCCTTCCAGGATTCCATCCACGGATGAAACTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAAIKMQMPQSSFFF*IYPSRIPSTDETFS Trigger: GGAGAAAGTTTCATCCGTGGATGGAATCCTGGAAGGATATATTCAAAAGAAGAAGGAACTCTGGGGCATCTGCATCTTTATCGCAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS GCA 90 bp | GGACAAGCAGGTTCAAGGTTATCAGGTCCTTCTCCATCCTTGGACTaGTTAATGAGATCAAATAAAGGTGAATCTGAAAGCCATGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQAGSRLSGPSPSLD*LMRSNKGESESHAR Trigger: CCTTGCATGGCTTTCAGATTCACCTTTATTTGATCTCATTAAGCAGTCCAAGGATGGAGAAGGACCTGATAACCTTGAACCTGCTTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS GCA 90 bp | TCCTCCTTGTTTGAGACATCCTTGCTCTCATTCATTCTCTGCTTTTaGATTCGTGTTCGAGTGGAAGTCATTTCTGCCAGTTTCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLFETSLLSFILCF*IRVRVEVISASFCW Trigger: CCAACAGAAACTGGCAGAAATGACTTCCACTCGAACACGAATGCAAAAGCAGAGAATGAATGAGAGCAAGGATGTCTCAAACAAGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGGGTCCTTCTCCATCCTaGGACTGCTTAATGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KMYHSRENTNIPRCRRTEGPSPS*DCLMRS Trigger: TGATCTCATTAAGCAGTCCAAGGATGGAGAAGGACC...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | CAGGACCCAGAAACATTAAAAAGTGCACTTGGGTTGTACTGTACTAGGGTCCTCCTTGTGTCTCTGTATTaGCAGCAGAATTTACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: QDPETLKSALGLYCTRVLLVSLY*QQNLHV Trigger: CACGTGTAAATTCTGCTGCAAATACAGAGACACAAG...GAGGACCCTAGTACAGTACAACCCAAGTGCACTTTTTAATGTTTCTGGGTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS GCA 90 bp | CACTTTTCCTCCTTGTTTGAGACATCCTTGCTCTCATTCATTCTCTaGTTTTGCATTCGTGTTCGAGTGGAAGTCATTTCTGCCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFSSLFETSLLSFIL*FCIRVRVEVISASF Trigger: GAAACTGGCAGAAATGACTTCCACTCGAACACGAATGCAAAAGCAGAGAATGAATGAGAGCAAGGATGTCTCAAACAAGGAGGAAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | CTAATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTCATTTTCTAGTTGTTTaGCTATCCGAGCGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LICVMIMQNLMKKWGKLSHFLVV*LSERSC Trigger: ACAGGAGCGCTCGGATAGCAAAACAACTAGAAAATG...AGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGGTTTTATCATTTCTCTaGTCAAGTTGGCTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KMYHSRENTNIPRCRRTEVLSFL*SSWLPL Trigger: AAGTGGAAGCCAACTTGACAAGAGAAATGATAAAAC...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AAGATGTACCATTCCAGAGAGAACACAAACATCCCCAGATGTAGAAGAACAGAGCAAATGATTCACCAATaGAGACCAAGATTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KMYHSRENTNIPRCRRTEQMIHQ*RPRFLI Trigger: GATCAAGAATCTTGGTCTCAATTGGTGAATCATTTG...CTCTGTTCTTCTACATCTGGGGATGTTTGTGTTCTCTCTGGAATGGTACATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCATTCATTCTCTGCTTTaGCATTCGTGTTCGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AYESPTQIFSLYLHILYLIHSLL*HSCSSG Trigger: TCCACTCGAACACGAATGCAAAAGCAGAGAATGAAT...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | GCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATCTCTTGTTTGAGACATCCTaGCTCTCATTCATTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AYESPTQIFSLYLHILYLLFETS*LSFILC Trigger: GCAGAGAATGAATGAGAGCAAGGATGTCTCAAACAA...GAGATATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | CTAATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTGAGCTCATACTCATTTaGCAATGTATGCTGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LICVMIMQNLMKKWGKLSELILI*QCMLKQ Trigger: CTGTTTCAGCATACATTGCAAAATGAGTATGAGCTC...AGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATACGATGATTTTGAACTaGAGGTCGATGTTCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYTMILN*RSMFFT Trigger: GGTGAAGAACATCGACCTCAAGTTCAAAATCATCGT...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATCCTTCAGCACTTCTTTaGAGCACTCTGTCACTATTA | + |
|
Preference number: 5 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYPSALL*STLSLL Trigger: TAATAGTGACAGAGTGCTCAAAAGAAGTGCTGAAGG...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATCTGATGGCTGATCACTaGCAGAATTTAAAATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYLMADH*QNLKSP Trigger: TGGTGATTTTAAATTCTGCAAGTGATCAGCCATCAG...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AGTGGCTTACGAATCACCCACACAAATATTCAGCTTGTACCTGCACATTTTATATGGAAGTTCTTTTCTTaGGAGATCTTAGAGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGLRITHTNIQLVPAHFIWKFFS*EILEEK Trigger: TTTCTCCTCTAAGATCTCCAAAGAAAAGAACTTCCA...TATAAAATGTGCAGGTACAAGCTGAATATTTGTGTGGGTGATTCGTAAGCCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS-3UTR CAA 90 bp | AATCTGTGTGATGATCATGCAAAACTTAATGAAGAAATGGGGGAAGCTGTCTATGAGTTCCTTCTTCTTTaGAATATATCCTTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLCDDHAKLNEEMGEAVYEFLLL*NISFQD Trigger: ATCCTGGAAGGATATATTCAAAAGAAGAAGGAACTC...ATAGACAGCTTCCCCCATTTCTTCATTAAGTTTTGCATGATCATCACACAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS GCA 72 bp | GAATTTGGACTCCGCTGGGAGATGTTTACTCCCATCTaGTTCATCGGCTCCCTCGATGTCAAAGCGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EFGLRWEMFTPI*FIGSLDVKAQL Trigger: AAGCTGCGCTTTGACATCGAGGGAGCCGATGAAGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS TCA 72 bp | TATCTGCTGCAGTATGGTTACCCTGGAGAGGCAGGCTaGGAGGACAAGCAGGTTCAAGGTTATCAGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YLLQYGYPGEAG*EDKQVQGYQVL Trigger: AAGGACCTGATAACCTTGAACCTGCTTGTCCTCTCAGCCTGCCTCTCCAGGGTAACCATACTGCAGCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 72 bp | GGAGAAAGATACATATCTGCTGCAGTATGGTTACCCTaGAGAGGCAGGCTGAGAGGACAAGCAGGTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GERYISAAVWLP*RGRLRGQAGSR Trigger: CCTTGAACCTGCTTGTCCTCTCAGCCTGCCTCTCCAGGGTAACCATACTGCAGCAGATATGTATCTTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 72 bp | CATTTCTGCCAGTTTCTGTTGGAATTTGGACTCCGCTaGGAGATGTTTACTCCCATCTGCTTCATCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HFCQFLLEFGLR*EMFTPICFIGS Trigger: GGAGCCGATGAAGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CCA 72 bp | GATCTTAGAGGAGAAAGATACATATCTGCTGCAGTATaGTTACCCTGGAGAGGCAGGCTGAGAGGACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DLRGERYISAAV*LPWRGRLRGQA Trigger: TGCTTGTCCTCTCAGCCTGCCTCTCCAGGGTAACCATACTGCAGCAGATATGTATCTTTCTCCTCTAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CAA 72 bp | CGAGTGGAAGTCATTTCTGCCAGTTTCTGTTGGAATTaGGACTCCGCTGGGAGATGTTTACTCCCATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVEVISASFCWN*DSAGRCLLPSA Trigger: AGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAAATGACTTCCACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS CAA 90 bp | ATTCGTGTTCGAGTGGAAGTCATTTCTGCCAGTTTCTGTTGGAATTaGGACTCCGCTGGGAGATGTTTACTCCCATCTGCTTCATCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IRVRVEVISASFCWN*DSAGRCLLPSASSA Trigger: AGCCGATGAAGCAGATGGGAGTAAACATCTCCCAGCGGAGTCCAAATTCCAACAGAAACTGGCAGAAATGACTTCCACTCGAACACGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
||
| CDS TCA 72 bp | GGAGGTAGATTTCAATGGCTTCTGAGTATGGAAGGCTaGGGCTGCTTGTGTCTCTGTATTTGCAGCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: GGRFQWLLSMEG*GCLCLCICSRI Trigger: AATTCTGCTGCAAATACAGAGACACAAGCAGCCTCAGCCTTCCATACTCAGAAGCCATTGAAATCTACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS CCA 72 bp | AGTTTATATCGCTGTACTCCGATGTCAACACAGCCCTaGCCCACAGCGTTAGCAAACTTCTCTTTAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SLYRCTPMSTQP*PTALANFSLKM Trigger: CATCTTTAAAGAGAAGTTTGCTAACGCTGTGGGCCAGGGCTGTGTTGACATCGGAGTACAGCGATATAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS TCA 72 bp | TCTCTCATGAGCTCATACTCATTTTGCAATGTATGCTaGAACAGAGTCCAGATGATGTGCTCTAGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLMSSYSFCNVC*NRVQMMCSSSG Trigger: CCCAGAGCTAGAGCACATCATCTGGACTCTGTTTCAGCATACATTGCAAAATGAGTATGAGCTCATGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS CAA 90 bp | CTGAGAGGACAAGCAGGTTCAAGGTTATCAGGTCCTTCTCCATCCTaGGACTGCTTAATGAGATCAAATAAAGGTGAATCTGAAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LRGQAGSRLSGPSPS*DCLMRSNKGESESH Trigger: ATGGCTTTCAGATTCACCTTTATTTGATCTCATTAAGCAGTCCAAGGATGGAGAAGGACCTGATAACCTTGAACCTGCTTGTCCTCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS GCA 72 bp | CACGGGAAGGACAAATCTGTTCCAGAATCAAGATGCTaGAATGTACTTCTGCTATACGTAGCCATTACAACT | + |
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Preference number: 6 (lower is better) Translates to: HGKDKSVPESRC*NVLLLYVAITT Trigger: AGTTGTAATGGCTACGTATAGCAGAAGTACATTGCAGCATCTTGATTCTGGAACAGATTTGTCCTTCCCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS GCA 72 bp | ATCCACGGGAAGGACAAATCTGTTCCAGAATCAAGATaGTGCAATGTACTTCTGCTATACGTAGCCATTACA | + |
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Preference number: 6 (lower is better) Translates to: IHGKDKSVPESR*CNVLLLYVAIT Trigger: TGTAATGGCTACGTATAGCAGAAGTACATTGCAGCATCTTGATTCTGGAACAGATTTGTCCTTCCCGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS GCA 72 bp | TTTGAGACATCCTTGCTCTCATTCATTCTCTGCTTTTaGATTCGTGTTCGAGTGGAAGTCATTTCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: FETSLLSFILCF*IRVRVEVISAS Trigger: ACTGGCAGAAATGACTTCCACTCGAACACGAATGCAAAAGCAGAGAATGAATGAGAGCAAGGATGTCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS TCA 72 bp | ATAAAGATGCAGATGCCCCAGAGTTCCTTCTTCTTTTaGATATATCCTTCCAGGATTCCATCCACGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: IKMQMPQSSFFF*IYPSRIPSTDE Trigger: TTCATCCGTGGATGGAATCCTGGAAGGATATATTCAAAAGAAGAAGGAACTCTGGGGCATCTGCATCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS CCA 72 bp | TTGAATAGTATTCATAACAGTCCTAACTGGAGTGTGTaGAGTAACCACGTTTGCCTCTTCATCAGGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LNSIHNSPNWSV*SNHVCLFIRVV Trigger: AACAACCCTGATGAAGAGGCAAACGTGGTTACTCCACACACTCCAGTTAGGACTGTTATGAATACTATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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| CDS CAA 72 bp | CAATTGAGACCAAGATTCTTGATCTCGGAGTCATTTTaGTGGGTGTTGGCAGACCTTCTGAAATTTTATAAG | + |
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Preference number: 6 (lower is better) Translates to: QLRPRFLISESF*WVLADLLKFYK Trigger: CTTATAAAATTTCAGAAGGTCTGCCAACACCCACAAAAATGACTCCGAGATCAAGAATCTTGGTCTCAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022701.7 |
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