Pregenerated sensors for RAX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024518Ensembl transcript IDs: ENSMUST00000025396.5, ENSMUST00000235720.2, ENSMUST00000237506.2, ENSMUST00000238035.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCGGCAGGCTCTGCAGCGCTGTGGCGCCTCCTCCGGGCAGCGGTaGCCCAAGCCACGGCTCCAGCGGCAGGGCGCTCCCCGGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SRQALQRCGASSGQR*PKPRLQRQGAPRRS Trigger: GGACCTCCGGGGAGCGCCCTGCCGCTGGAGCCGTGGCTTGGGCCACCGCTGCCCGGAGGAGGCGCCACAGCGCTGCAGAGCCTGCCGGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 90 bp | CGGCGCGCAGGGGTACGCGGGCGGTGGCCCGAGCTGCTGCAGACCTaGACCCAGGGGCGCGGAGTTCAGGAAGGGCGGTGGTGGCGTGTA | + |
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Preference number: 1 (lower is better) Translates to: RRAGVRGRWPELLQT*TQGRGVQEGRWWRV Trigger: TACACGCCACCACCGCCCTTCCTGAACTCCGCGCCCCTGGGTCCAGGTCTGCAGCAGCTCGGGCCACCGCCCGCGTACCCCTGCGCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 90 bp | CTGCAGACCTGGACCCAGGGGCGCGGAGTTCAGGAAGGGCGGTGGTaGCGTGTAGCTGGCCGGGAGACCCTGCCCCGGCGGCCCGAATCC | + |
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Preference number: 1 (lower is better) Translates to: LQTWTQGRGVQEGRW*RVAGRETLPRRPES Trigger: GGATTCGGGCCGCCGGGGCAGGGTCTCCCGGCCAGCTACACGCCACCACCGCCCTTCCTGAACTCCGCGCCCCTGGGTCCAGGTCTGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 90 bp | GCTGTTGCGCGGGTACGCCTCTTCCAGCGAGAACTTGTCCCCGAATaGCGGCGCGCAGGGGTACGCGGGCGGTGGCCCGAGCTGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: AVARVRLFQRELVPE*RRAGVRGRWPELLQ Trigger: CTGCAGCAGCTCGGGCCACCGCCCGCGTACCCCTGCGCGCCGGCATTCGGGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 90 bp | CAGCAACTCCGCAGCGCCTCTAGAGGGCTTGCCAGGGCTTTCCGATaGCCTGGATGTGCTCTTTGGCCTTCAGGCGCAGAGCGGCGATGC | + |
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Preference number: 1 (lower is better) Translates to: QQLRSASRGLARAFR*PGCALWPSGAERRC Trigger: GCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGCCCTCTAGAGGCGCTGCGGAGTTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 90 bp | TGGCCTGGATGTGCTCTTTGGCCTTCAGGCGCAGAGCGGCGATGCTaGTGTTGCGCGGGTACGCCTCTTCCAGCGAGAACTTGTCCCCGA | + |
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Preference number: 1 (lower is better) Translates to: WPGCALWPSGAERRC*CCAGTPLPARTCPR Trigger: TCGGGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 90 bp | CGATGGCCTGGATGTGCTCTTTGGCCTTCAGGCGCAGAGCGGCGATaGTGCTGTTGCGCGGGTACGCCTCTTCCAGCGAGAACTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: RWPGCALWPSGAERR*CCCAGTPLPARTCP Trigger: GGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 90 bp | TCTAGAATACTTAGTGTGTATGTCTGGAGGCCCTGGCCGTGGCTATaGCTGTCAGAGCTCTCAGGGCCTACAGGACAAGGGCTGGATTAC | + |
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Preference number: 1 (lower is better) Translates to: SRILSVYVWRPWPWL*LSELSGPTGQGLDY Trigger: GTAATCCAGCCCTTGTCCTGTAGGCCCTGAGAGCTCTGACAGGCATAGCCACGGCCAGGGCCTCCAGACATACACACTAAGTATTCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 90 bp | TTTCTCTCTAGAATACTTAGTGTGTATGTCTGGAGGCCCTGGCCGTaGCTATGCCTGTCAGAGCTCTCAGGGCCTACAGGACAAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: FLSRILSVYVWRPWP*LCLSELSGPTGQGL Trigger: CAGCCCTTGTCCTGTAGGCCCTGAGAGCTCTGACAGGCATAGCCACGGCCAGGGCCTCCAGACATACACACTAAGTATTCTAGAGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR TCA 90 bp | CTCCTCCTACCCAGCATCCTGGGAGCTGTTAGCAGAACTCACGCTTaGGGGATGCATAAAATTAGGGAGTCAGAAGAAAGAGTCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LLLPSILGAVSRTHA*GMHKIRESEERVSQ Trigger: CTGAGAGACTCTTTCTTCTGACTCCCTAATTTTATGCATCCCTCAAGCGTGAGTTCTGCTAACAGCTCCCAGGATGCTGGGTAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 90 bp | TACCCAGCATCCTGGGAGCTGTTAGCAGAACTCACGCTTGAGGGATaGATAAAATTAGGGAGTCAGAAGAAAGAGTCTCTCAGGACAATC | + |
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Preference number: 1 (lower is better) Translates to: YPASWELLAELTLEG*IKLGSQKKESLRTI Trigger: GATTGTCCTGAGAGACTCTTTCTTCTGACTCCCTAATTTTATGCATCCCTCAAGCGTGAGTTCTGCTAACAGCTCCCAGGATGCTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 90 bp | AACTTTACAAAGTTTCTTCAACCTATTTTTCTCACTCCCCATTCCTaGCGTCCGGAACATCCCAGGTCAAGATCCTTGGTCCTTCCCGAT | + |
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Preference number: 1 (lower is better) Translates to: NFTKFLQPIFLTPHS*RPEHPRSRSLVLPD Trigger: ATCGGGAAGGACCAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAATAGGTTGAAGAAACTTTGTAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| 3UTR CAA 90 bp | GCGGCGATGCTGCTGTTGCGCGGGTACGCCTCTTCCAGCGAGAACTaGTCCCCGAATGCCGGCGCGCAGGGGTACGCGGGCGGTGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: AAMLLLRGYASSSEN*SPNAGAQGYAGGGP Trigger: CGGGCCACCGCCCGCGTACCCCTGCGCGCCGGCATTCGGGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCGGGTACGCCTCTTCCAGCGAGAACTTGTCCCCGAATGCCGGCGCGCAGGTGGTGGCGTGTAGCTaGCCGGGAGACCCTGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: LRGYASSSENLSPNAGAQVVACS*PGDPAP Trigger: CGGGGCAGGGTCTCCCGGCCAGCTACACGCCACCAC...CTGCGCGCCGGCATTCGGGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGGCCCCAGGCTGGGCTGGGTaGACACAGGGCTCGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PPKAGWRLAAGLAKKSSAPGWAG*TQGSQQ Trigger: TTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGG...GGCCGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTGCCAGGGCTTTCCGATGGCCTGGATGTGCTCTTTGGCCTTCAGGCGCACCAGGCTGGGCTGGGTaGACACAGGGCTCGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GLARAFRWPGCALWPSGAPGWAG*TQGSQQ Trigger: TTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGG...TGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACCCAGGGGCGCGGAGTTCAGGAAGGGCGGTGGTGGCGTGTAGCTGGCCGGAGGAGGGGAGAATCCTaGAGCTTCATGGACGACACT | + |
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Preference number: 2 (lower is better) Translates to: WTQGRGVQEGRWWRVAGRRRGES*SFMDDT Trigger: AGTGTCGTCCATGAAGCTGCAGGATTCTCCCCTCCT...CCGGCCAGCTACACGCCACCACCGCCCTTCCTGAACTCCGCGCCCCTGGGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CAA 90 bp | GGTGCACACAGGGCTCGCAGCAACTCCGCAGCGCCTCTAGAGGGCTaGCCAGGGCTTTCCGATGGCCTGGATGTGCTCTTTGGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GAHRARSNSAAPLEG*PGLSDGLDVLFGLQ Trigger: CTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGCCCTCTAGAGGCGCTGCGGAGTTGCTGCGAGCCCTGTGTGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTGGCCTCTTTCGAACCGCCCAAGGCTGGCTaGCGGCTTGCAGCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PQFVPLTARLNFRLASFEPPKAG*RLAAGL Trigger: TAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGG...TTCGAAAGAGGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTTCTCACTCCCCATTCCTGCCGTCCGGAACATCCCAGGTCAAGATCCTTGAATCCCGGCAGGCTCTaGAGCGCTGTGGCGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IFLTPHSCRPEHPRSRSLNPGRL*SAVAPP Trigger: AGGAGGCGCCACAGCGCTGCAGAGCCTGCCGGGATT...CAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTCCCAGACCCACCAGGTCCAAAATAACATCATCCTTTCCCAGACCTTACGGCGATGCTGCTGTTaGGCGGGTACGCCTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QHSQTHQVQNNIILSQTLRRCCC*AGTPLP Trigger: TGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCG...TAAGGTCTGGGAAAGGATGATGTTATTTTGGACCTGGTGGGTCTGGGAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGCGAGGCTGAATTTCCGTTTGGCCTCTTTCGAAGAGTAGGCGCGAGTGTCCCAGGTCAAGATCCTTaGTCCTTCCCGATGATAGGC | + |
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Preference number: 2 (lower is better) Translates to: DSEAEFPFGLFRRVGASVPGQDP*SFPMIG Trigger: GCCTATCATCGGGAAGGACCAAGGATCTTGACCTGG...GACACTCGCGCCTACTCTTCGAAAGAGGCCAAACGGAAATTCAGCCTCGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGAATCCTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCTTAGCCCGTCGGTTCTaGAACCATACCTGGGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: RGESCSFMDDTSSFSWRLLARRF*NHTWVS Trigger: ACTAACCCAGGTATGGTTCCAGAACCGACGGGCTAA...GAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGATTCTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGAGCTCTCAGGGCCTACAGGACAAGGGCTGGATTACACTCCTCTGCCTTTTCCTGCTCCACAGTaGCCCCCACCAAACCTAATA | + |
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Preference number: 2 (lower is better) Translates to: LSELSGPTGQGLDYTPLPFPAPQ*PPPNLI Trigger: TATTAGGTTTGGTGGGGGCCACTGTGGAGCAGGAAA...AGGCAGAGGAGTGTAATCCAGCCCTTGTCCTGTAGGCCCTGAGAGCTCTGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | GCTCTGCAGCGCTGTGGCGCCTCCTCCGGGCAGCGGTaGCCCAAGCCACGGCTCCAGCGGCAGGGCGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: ALQRCGASSGQR*PKPRLQRQGAP Trigger: GGGAGCGCCCTGCCGCTGGAGCCGTGGCTTGGGCCACCGCTGCCCGGAGGAGGCGCCACAGCGCTGCAGAGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | CCGGCGGCCCGAATCCCGGCAGGCTCTGCAGCGCTGTaGCGCCTCCTCCGGGCAGCGGTGGCCCAAGCCACG | + |
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Preference number: 3 (lower is better) Translates to: PAARIPAGSAAL*RLLRAAVAQAT Trigger: CGTGGCTTGGGCCACCGCTGCCCGGAGGAGGCGCCACAGCGCTGCAGAGCCTGCCGGGATTCGGGCCGCCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | GCGCGGAGTTCAGGAAGGGCGGTGGTGGCGTGTAGCTaGCCGGGAGACCCTGCCCCGGCGGCCCGAATCCCG | + |
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Preference number: 3 (lower is better) Translates to: ARSSGRAVVACS*PGDPAPAARIP Trigger: CGGGATTCGGGCCGCCGGGGCAGGGTCTCCCGGCCAGCTACACGCCACCACCGCCCTTCCTGAACTCCGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | TGGACCCAGGGGCGCGGAGTTCAGGAAGGGCGGTGGTaGCGTGTAGCTGGCCGGGAGACCCTGCCCCGGCGG | + |
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Preference number: 3 (lower is better) Translates to: WTQGRGVQEGRW*RVAGRETLPRR Trigger: CCGCCGGGGCAGGGTCTCCCGGCCAGCTACACGCCACCACCGCCCTTCCTGAACTCCGCGCCCCTGGGTCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | ACCTGGACCCAGGGGCGCGGAGTTCAGGAAGGGCGGTaGTGGCGTGTAGCTGGCCGGGAGACCCTGCCCCGG | + |
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Preference number: 3 (lower is better) Translates to: TWTQGRGVQEGR*WRVAGRETLPR Trigger: CCGGGGCAGGGTCTCCCGGCCAGCTACACGCCACCACCGCCCTTCCTGAACTCCGCGCCCCTGGGTCCAGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | CGGGTACGCCTCTTCCAGCGAGAACTTGTCCCCGAATaGCGGCGCGCAGGGGTACGCGGGCGGTGGCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: RVRLFQRELVPE*RRAGVRGRWPE Trigger: CTCGGGCCACCGCCCGCGTACCCCTGCGCGCCGGCATTCGGGGACAAGTTCTCGCTGGAAGAGGCGTACCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR-3UTR CAA 90 bp | GCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCAGCGCCTCGCCTGGATGTGCTCTTaGGCCTTCAGGCGCAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: ATRLGWVHTGLAATPQRLAWMCS*AFRRRA Trigger: CGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGC...GAGGCGCTGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | CTTTGGCCTTCAGGCGCAGAGCGGCGATGCTGCTGTTaGGCGGGTACGCCTCTTCCAGCGAGAACTTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LWPSGAERRCCC*AGTPLPARTCP Trigger: GGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | GGATGTGCTCTTTGGCCTTCAGGCGCAGAGCGGCGATaGTGCTGTTGCGCGGGTACGCCTCTTCCAGCGAGA | + |
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Preference number: 3 (lower is better) Translates to: GCALWPSGAERR*CCCAGTPLPAR Trigger: TCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | CGCAGCGCCTCTAGAGGGCTTGCCAGGGCTTTCCGATaGCCTGGATGTGCTCTTTGGCCTTCAGGCGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RSASRGLARAFR*PGCALWPSGAE Trigger: CTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGCCCTCTAGAGGCGCTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | TGTGCTCTTTGGCCTTCAGGCGCAGAGCGGCGATGCTaGTGTTGCGCGGGTACGCCTCTTCCAGCGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: CALWPSGAERRC*CCAGTPLPART Trigger: AGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | CTTGCCAGGGCTTTCCGATGGCCTGGATGTGCTCTTTaGCCTTCAGGCGCAGAGCGGCGATGCTGCTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LARAFRWPGCAL*PSGAERRCCCC Trigger: GCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | CTTTCGAAGAGTAGGCGCGAGTGTCCCGCCCAAGGCTaGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LSKSRRECPAQG*LAACSRASKEK Trigger: CTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACACTCGCGCCTACTCTTCGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTGCCAGGGCTTTCCGATGGCCTGGATGTGCTCTTTGGCCTTCAGGCGCACCCAGGTCAAGATCCTaGGTCCTTCCCGATGATAGG | + |
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Preference number: 3 (lower is better) Translates to: GLARAFRWPGCALWPSGAPRSRS*VLPDDR Trigger: CCTATCATCGGGAAGGACCAAGGATCTTGACCTGGG...TGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | CTTAGTGTGTATGTCTGGAGGCCCTGGCCGTGGCTATaGCTGTCAGAGCTCTCAGGGCCTACAGGACAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSVYVWRPWPWL*LSELSGPTGQG Trigger: CCCTTGTCCTGTAGGCCCTGAGAGCTCTGACAGGCATAGCCACGGCCAGGGCCTCCAGACATACACACTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | AGAATACTTAGTGTGTATGTCTGGAGGCCCTGGCCGTaGCTATGCCTGTCAGAGCTCTCAGGGCCTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: RILSVYVWRPWP*LCLSELSGPTG Trigger: TCCTGTAGGCCCTGAGAGCTCTGACAGGCATAGCCACGGCCAGGGCCTCCAGACATACACACTAAGTATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | GGAGTCAGAAGAAAGAGTCTCTCAGGACAATCCCAGTaGAGCACTCAGCATTCCCAGACCCACCAGGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: GVRRKSLSGQSQ*STQHSQTHQVQ Trigger: TTGGACCTGGTGGGTCTGGGAATGCTGAGTGCTGCACTGGGATTGTCCTGAGAGACTCTTTCTTCTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | CCAGGACAGCAGATGATGGAAACTGAGCCTCCAAGCTaGAAGGTCCCTTTGCCATCAAGGCCAGCACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PGQQMMETEPPS*KVPLPSRPALK Trigger: TTTCAGTGCTGGCCTTGATGGCAAAGGGACCTTGCAGCTTGGAGGCTCAGTTTCCATCATCTGCTGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR TCA 72 bp | TATGCTAAGGACCCCAGGACAGCAGATGATGGAAACTaGGCCTCCAAGCTGCAAGGTCCCTTTGCCATCAAG | + |
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Preference number: 3 (lower is better) Translates to: YAKDPRTADDGN*ASKLQGPFAIK Trigger: CTTGATGGCAAAGGGACCTTGCAGCTTGGAGGCTCAGTTTCCATCATCTGCTGTCCTGGGGTCCTTAGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR TCA 72 bp | CCCAGCATCCTGGGAGCTGTTAGCAGAACTCACGCTTaGGGGATGCATAAAATTAGGGAGTCAGAAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PSILGAVSRTHA*GMHKIRESEER Trigger: TCTTTCTTCTGACTCCCTAATTTTATGCATCCCTCAAGCGTGAGTTCTGCTAACAGCTCCCAGGATGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | AAGTTTCTTCAACCTATTTTTCTCACTCCCCATTCCTaGCGTCCGGAACATCCCAGGTCAAGATCCTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: KFLQPIFLTPHS*RPEHPRSRSLV Trigger: GACCAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAATAGGTTGAAGAAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | TCCTGGGAGCTGTTAGCAGAACTCACGCTTGAGGGATaGATAAAATTAGGGAGTCAGAAGAAAGAGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SWELLAELTLEG*IKLGSQKKESL Trigger: GAGAGACTCTTTCTTCTGACTCCCTAATTTTATGCATCCCTCAAGCGTGAGTTCTGCTAACAGCTCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR GCA 72 bp | CTAGGAATAGAGCTGAGACAGAGCAGTAGCCATCTTTaGCCTGTTCTTGTAAAGGTAATCTGCACAGAGATC | + |
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Preference number: 3 (lower is better) Translates to: LGIELRQSSSHL*PVLVKVICTEI Trigger: GATCTCTGTGCAGATTACCTTTACAAGAACAGGGCAAAGATGGCTACTGCTCTGTCTCAGCTCTATTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| 3UTR CCA 72 bp | CACTCCATTTCCCCCAGTGACATCCTAGTAAGGAAATaGAGAAGTTATTCTCTACATCTTGAGACAGCGACT | + |
|
Preference number: 3 (lower is better) Translates to: HSISPSDILVRK*RSYSLHLETAT Trigger: AGTCGCTGTCTCAAGATGTAGAGAATAACTTCTCCATTTCCTTACTAGGATGTCACTGGGGGAAATGGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCCCAAGCCACGGCTCCAGCGGCAGGGCGCTCCCCGGAGGTCCGCTCCCCTCGGAGCCTCCGGCTaGCGCCTTGGGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWPKPRLQRQGAPRRSAPLGASG*RLGAGR Trigger: CCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAG...GGGAGCGGACCTCCGGGGAGCGCCCTGCCGCTGGAGCCGTGGCTTGGGCCACCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | CGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCAGCGCCAGCTCCCGTCCGCCATaGCTGGCGCGCAGCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPGWAGCTQGSQQLRSASSRPP*LARSPA Trigger: TGCCGGGCTGCGCGCCAGCCATGGCGGACGGGAGCT...GGCGCTGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGAGTAGGCGCGAGTGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGGTGGTGGCGTGTAGCTaGCCGGGAGACCCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRVGASVPPKAGWRLAAGVVACS*PGDPAP Trigger: CGGGGCAGGGTCTCCCGGCCAGCTACACGCCACCAC...CCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACACTCGCGCCTACTCTTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCAGCGCCTCTAGAGGGCTGCGGAGCAGGTaGCCAGCGAGCGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGWAGCTQGSQQLRSASRGLRSR*PASEKL Trigger: GAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCC...TCTAGAGGCGCTGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| 3UTR CAA 72 bp | CTGCTGTTGCGCGGGTACGCCTCTTCCAGCGAGAACTaGTCCCCGAATGCCGGCGCGCAGGGGTACGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRGYASSSEN*SPNAGAQGYAG Trigger: GCCCGCGTACCCCTGCGCGCCGGCATTCGGGGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGTCCCAGCGGGGCCAGTaGCGAGGAAGGCGGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPPKAGWRLAAGLAKKSSSQRGQ*RGRRGA Trigger: CGCTCCCCGCCTTCCTCGGCACTGGCCCCGCTGGGA...CGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCAGCTGCGCGCCCAGCCTaGGATCCCGCTCTTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KFGHQAGLGAHRARSNSAAARPA*DPALSS Trigger: GCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGC...TGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCACAGGAAGGGCGGTGGTaGCGTGTAGCTGGCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFGHQAGLGAHRARSNSAQEGRW*RVAGRE Trigger: CTCCCGGCCAGCTACACGCCACCACCGCCCTTCCTG...TGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR GCA 90 bp | GTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGTTGGGGCAGGCAGGCTaGGCGCCCAGCCTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPPKAGWRLAAGLAKKSSLGQAG*APSLGS Trigger: GGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAA...CGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAAAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCATTGGGGCAGGCAGGCTaGGCGCCCAGCCTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AKKSSATRLGWVHTGLAALGQAG*APSLGS Trigger: GGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAA...TGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTTTTCTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGGCCACTGTGCAAACGCGACGTaGTCCCGCCCGGGCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQGWLAACSRASKEKFGHCANAT*SRPGCG Trigger: TCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACA...GTGGCCGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCACGGCGATGCTGCTGTTaGGCGGGTACGCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFGHQAGLGAHRARSNSARRCCC*AGTPLP Trigger: TGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCG...TGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR GCA 90 bp | GTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGGGCGCAGAGCGGCGATaGTGCTGTTGCGCGGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: VPPKAGWRLAAGLAKKSSGAERR*CCCAGT Trigger: CGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCC...CGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGCAAAGAAAAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGGGCTGCGGAGCAGGTaGCCAGCGAGCGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLAKKSSATRLGWVHTGLGLRSR*PASEKL Trigger: GAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCC...GAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTTTTCTTTGCTAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCCCGTTGGGGCAGGCAGGCTaGGCGCCCAGCCTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLHGRHFQFLLAPPLSPLGQAG*APSLGS Trigger: GGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAA...CGGGCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCTCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPAQGWLAACSRASKEKFSRGCW*GRLGAS Trigger: GGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGA...GAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGAGTAGGCGCGAGTGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGTTAGCCCGTCGGTTCTaGAACCATACCTGGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRVGASVPPKAGWRLAAGLARRF*NHTWTR Trigger: TCGGGTCCAGGTATGGTTCCAGAACCGACGGGCTAA...CCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACACTCGCGCCTACTCTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAAAAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAGAGCTGCTGCAGACCTaGACCCAGGGGCGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AKKSSATRLGWVHTGLAAELLQT*TQGRGV Trigger: AACTCCGCGCCCCTGGGTCCAGGTCTGCAGCAGCTC...TGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTTTTCTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR TCA 90 bp | GGGCTAGCAAAGAAAAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCAAGGCGGGGAGCGGCTaGAGGAGAGGAGGGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLAKKSSATRLGWVHTGLKAGSG*RRGGEN Trigger: ATTCTCCCCTCCTCTCCTTCAGCCGCTCCCCGCCTT...GAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTTTTCTTTGCTAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR GCA 90 bp | TGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGCAGAGCGGCGATGCTaGTGTTGCGCGGGTACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPAQGWLAACSRASKEKFAERRC*CCAGTP Trigger: AGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGC...GAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCCTCGGAGCCTCCGGCTaGCGCCTTGGGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILQLHGRHFQFLLAPPLSLGASG*RLGAGR Trigger: CCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAG...GCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
||
| CDS-3UTR GCA 90 bp | GCTATGCCTGTCAGAGCTCTCAGGGCCTACAGGACAAGGGCTGGATTACACTCCTGTGCAAACGCGACGTaGTCCCGCCCGGGCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AMPVRALRAYRTRAGLHSCANAT*SRPGCG Trigger: TCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACA...GGAGTGTAATCCAGCCCTTGTCCTGTAGGCCCTGAGAGCTCTGACAGGCATAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCCCGTCGGTTCGCTGCGCGCCCAGCCTaGGATCCCGCTCTTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FMDDTSSFSWRLHLARRFAARPA*DPALSS Trigger: GCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGC...GAACCGACGGGCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
||
| CDS-3UTR CCA 90 bp | CCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTGGCCTCTTTCGAACTCGGAGCCTCCGGCTaGCGCCTTGGGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQFVPLTARLNFRLASFELGASG*RLGAGR Trigger: CCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAG...TTCGAAAGAGGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTCGCAGCAACTCCGCAGGCTTTCCGATGGCCTaGATGTGCTCTTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFGHQAGLGAHRARSNSAGFPMA*MCSLAF Trigger: GAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCC...TGCGGAGTTGCTGCGAGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| 3UTR CAA 72 bp | TCTTTGGCCTTCAGGCGCAGAGCGGCGATGCTGCTGTaGCGCGGGTACGCCTCTTCCAGCGAGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLAFRRRAAMLL*RGYASSSENLS Trigger: GGACAAGTTCTCGCTGGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| 3UTR CAA 72 bp | GCTTGCCAGGGCTTTCCGATGGCCTGGATGTGCTCTTaGGCCTTCAGGCGCAGAGCGGCGATGCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACQGFPMAWMCS*AFRRRAAMLLL Trigger: CAACAGCAGCATCGCCGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| 3UTR CAA 72 bp | AGGGCTCGCAGCAACTCCGCAGCGCCTCTAGAGGGCTaGCCAGGGCTTTCCGATGGCCTGGATGTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RARSNSAAPLEG*PGLSDGLDVLF Trigger: AAAGAGCACATCCAGGCCATCGGAAAGCCCTGGCAAGCCCTCTAGAGGCGCTGCGGAGTTGCTGCGAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR GCA 90 bp | CAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTGGCCCCGATGGCCTGGATGTaGTCTTTGGCCTTCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRDPQFVPLTARLNFRLAPMAWM*SLAFRR Trigger: GCGCCTGAAGGCCAAAGAGCACATCCAGGCCATCGG...GGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTCACTCCCCATTCCTGCCGTCCGGAACATCCCAGGTCAAGATCCTTGAGCTCCCGTCCGCCATaGCTGGCGCGCAGCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLTPHSCRPEHPRSRSLSSRPP*LARSPA Trigger: TGCCGGGCTGCGCGCCAGCCATGGCGGACGGGAGCT...CAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCTCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILQLHGRHFQFLLAPPLSSRGCW*GRLGAS Trigger: GGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGA...GCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTCACTCCCCATTCCTGCCGTCCGGAACATCCCAGGTCAAGATCCTTGGGCTCTGCAGCGCTGTaGCGCCTCCTCCGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IFLTPHSCRPEHPRSRSLGSAAL*RLLRAA Trigger: CGCTGCCCGGAGGAGGCGCCACAGCGCTGCAGAGCC...CAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR GCA 90 bp | TGGACAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTCAGCTTCGAGTCGCCTaGTGCTGGCCCAACCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WTAGPAVCPSDSEAEFPFQLRVA*CWPNRE Trigger: CTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTG...AAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGAGAATCCTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCAGCTTCGAGTCGCCTaGTGCTGGCCCAACCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRGESCSFMDDTSSFSWRQLRVA*CWPNRE Trigger: CTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTG...GCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGATTCTCCCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGGCCACAGGAGGGGAGAATCCTaGAGCTTCATGGACGACACT | + |
|
Preference number: 4 (lower is better) Translates to: AQGWLAACSRASKEKFGHRRGES*SFMDDT Trigger: AGTGTCGTCCATGAAGCTGCAGGATTCTCCCCTCCT...GTGGCCGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | CAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTGGCCGCTCTTTCGAGCTCCTaGAGCTCCTCTCTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRDPQFVPLTARLNFRLAALSSS*SSSLQE Trigger: TTCCTGCAGAGAGGAGCTCCAGGAGCTCGAAAGAGC...GGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGGTCGATGCTTCTTCTTaGGAGGTTCCTCCTCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPPKAGWRLAAGLAKKSSVDASS*EVPPPT Trigger: TGTCGGAGGAGGAACCTCCCAAGAAGAAGCATCGAC...CGAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | TGGACAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTCCTGGATGTGCTCTTTaGCCTTCAGGCGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTAGPAVCPSDSEAEFPFPGCAL*PSGAER Trigger: CCGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGG...AAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCCCGTGCAGTTGGTAAGTGGTaGACGTCGTGCGGTTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSFMDDTSSFSWRLHLARAVGKW*TSCGCV Trigger: GACGCAACCGCACGACGTTCACCACTTACCAACTGC...ACGGGCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGAAAGAGTCTCTCAGGACAATCCCAGTGCAGCACTCAGCATTCCCAGAGCTGCGCGCCCAGCCTaGGATCCCGCTCTTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEERVSQDNPSAALSIPRAARPA*DPALSS Trigger: GCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGC...TCTGGGAATGCTGAGTGCTGCACTGGGATTGTCCTGAGAGACTCTTTCTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | CAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTGGCCTTAGCCCGTCGGTTCTaGAACCATACCTTCGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: QRDPQFVPLTARLNFRLALARRF*NHTFVL Trigger: GAGTACGAAGGTATGGTTCCAGAACCGACGGGCTAA...GGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATAGAGCTGAGACAGAGCAGTAGCCATCTTTGCCCTGTTCTTGTAAAGTCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGIELRQSSSHLCPVLVKSRGCW*GRLGAS Trigger: GGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGA...CTTTACAAGAACAGGGCAAAGATGGCTACTGCTCTGTCTCAGCTCTATTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCGAGGCTGAATTTCCGTTTGGCCTCTTTCGAAGAGTAGGCGCGAGTGTCACTTCCAGTTTCTCCTaGCGCCTCCACTTAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSEAEFPFGLFRRVGASVTSSFS*RLHLAR Trigger: ACGGGCTAAGTGGAGGCGCCAGGAGAAACTGGAAGT...GACACTCGCGCCTACTCTTCGAAAGAGGCCAAACGGAAATTCAGCCTCGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTCACTCCCCATTCCTGCCGTCCGGAACATCCCAGGTCAAGATCCTTGGCAGTTGGTAAGTGGTaGACGTCGTGCGGTTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IFLTPHSCRPEHPRSRSLAVGKW*TSCGCV Trigger: GACGCAACCGCACGACGTTCACCACTTACCAACTGC...CAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
||
| CDS-3UTR CCA 90 bp | AGGGCTAGCAAAGAAAAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTAATCCTGCAGCTTCATaGACGACACTTCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RASKEKFGHQAGLGAHRANPAAS*TTLPVS Trigger: AGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGATT...AGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTTTTCTTTGCTAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| CDS-3UTR CCA 90 bp | ATTTTTCTCACTCCCCATTCCTGCCGTCCGGAACATCCCAGGTCAAGATCCTTGGCCAGGGCTTTCCGATaGCCTGGATGTGCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLTPHSCRPEHPRSRSLARAFR*PGCALW Trigger: CCAAAGAGCACATCCAGGCCATCGGAAAGCCCTGGC...CAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| 3UTR CAA 72 bp | GGAACCATACCTGGGTTAGTTCCATTCTCAGATGCATaGAATTCGCTCTCACCGTCTCCCTCTCAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTIPGLVPFSDA*NSLSPSPSQAP Trigger: AGGGGCCTGAGAGGGAGACGGTGAGAGCGAATTCAATGCATCTGAGAATGGAACTAACCCAGGTATGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCAGATGCATTGAATTCGCTCTCACCGTCTCCCTCTCAGGCCCCTGTAAAGTCGATGCTTCTTCTTaGGAGGTTCCTCCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: ILRCIEFALTVSLSGPCKVDASS*EVPPPT Trigger: TGTCGGAGGAGGAACCTCCCAAGAAGAAGCATCGAC...TTTACAGGGGCCTGAGAGGGAGACGGTGAGAGCGAATTCAATGCATCTGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
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| CDS CCA 90 bp | CCGGGGCTGCTGGTGGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTaGGGCAGGCAGGCTGCGCGCCCAGCCTGGGATCCCGCTCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: PGLLVGKTRSLRLAP*GRQAARPAWDPALS Trigger: CGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS GCA 90 bp | GGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTGGGGCAGGCAGGCTaGGCGCCCAGCCTGGGATCCCGCTCTTTCGAGCTCCTGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GEDSEPPAGALGQAG*APSLGSRSFELLEL Trigger: GAGCTCCAGGAGCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 90 bp | ATGCTGTGCAAACGCGACGTGCTCCCGCCCGGGCTGCGGAGCAGGTaGCCAGCGAGCGAGAAGCTCCCGTCCGCCATGGCTGGCGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLCKRDVLPPGLRSR*PASEKLPSAMAGAQ Trigger: CTGCGCGCCAGCCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACAGCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| CDS GCA 90 bp | GGATGGCTTCGATGCTGTGCAAACGCGACGTGCTCCCGCCCGGGCTaGGGAGCAGGTGGCCAGCGAGCGAGAAGCTCCCGTCCGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: GWLRCCANATCSRPG*GAGGQRARSSRPPW Trigger: CCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACAGCATCGAAGCCATCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 90 bp | AGCCTCCGGCTGGCGCCTTGGGGCAGGCAGGCTGCGCGCCCAGCCTaGGATCCCGCTCTTTCGAGCTCCTGGAGCTCCTCTCTGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SLRLAPWGRQAARPA*DPALSSSWSSSLQE Trigger: TTCCTGCAGAGAGGAGCTCCAGGAGCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAAGGCGCCAGCCGGAGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 90 bp | GGGCCTAGTAGCTTCGTACTCCGGGACGAATCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTGGGGCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSSFVLRDESRGCW*GRLGASGWRLGAGR Trigger: CCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGATTCGTCCCGGAGTACGAAGCTACTAGGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS CCA 90 bp | TGGAACCATACCTTCGTACTCCGGGACGAATCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTGGGGCAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: WNHTFVLRDESRGCW*GRLGASGWRLGAGR Trigger: CCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGATTCGTCCCGGAGTACGAAGGTATGGTTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| CDS CCA 90 bp | ATGCTGTGCAAACGCGACGTGCTCCCGCCCGGGCTGCGGAGCAGGTaGCCAGCGAGCGAGAAGCTCCCGTCCGCCATGGCATCTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MLCKRDVLPPGLRSR*PASEKLPSAMASPK Trigger: TTTGGGAGATGCCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACAGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237506.2 |
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| CDS CCA 90 bp | CTCCGACAGCTTCGAGTCGCCTGCTGCTGGCCCAACCGAGAGTCCTaGGCTCGGACGTGCTTCTCCTTGCTCCTTGGGGTAGCAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LRQLRVACCWPNRES*ARTCFSLLLGVAGP Trigger: AGGCCCTGCTACCCCAAGGAGCAAGGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS-3UTR CAA 90 bp | CGAAGAGTAGGCGCGAGTGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCGTCGATGCTTCTTCTaGGGAGGTTCCTCCTCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RRVGASVPPKAGWRLAAGRRCFF*GGSSSD Trigger: GTCGGAGGAGGAACCTCCCAAGAAGAAGCATCGACG...CCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACACTCGCGCCTACTCTTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| CDS GCA 90 bp | AGGATGCCGTCTTCCTTGGTAAAGCCCAGGATGGCTTCGATGCTGTaGAAACGCGACGTGCTCCCGCCCGGGCTGCGGAGCAGGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMPSSLVKPRMASML*KRDVLPPGLRSRWP Trigger: TGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACAGCATCGAAGCCATCCTGGGCTTTACCAAGGAAGACGGCATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS-3UTR CAA 90 bp | CGAAGAGTAGGCGCGAGTGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGGTGAACGTCGTGCGGTaGCGTCGATGCTTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: RRVGASVPPKAGWRLAAGVNVVR*RRCFFL Trigger: CAAGAAGAAGCATCGACGCAACCGCACGACGTTCAC...CCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACACTCGCGCCTACTCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| CDS-3UTR CAA 90 bp | AGGGCTAGCAAAGAAAAGTTCGGCCACCAGGCTGGGCTGGGTGCACACAGGGCTGCGGCGATGCTGCTGTaGCGCGGGTACGCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASKEKFGHQAGLGAHRAAAMLL*RGYASS Trigger: GGAAGAGGCGTACCCGCGCAACAGCAGCATCGCCGC...AGCCCTGTGTGCACCCAGCCCAGCCTGGTGGCCGAACTTTTCTTTGCTAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| CDS GCA 90 bp | CGAGTCGCCTGCTGCTGGCCCAACCGAGAGTCCTGGGCTCGGACGTaGTTCTCCTTGCTCCTTGGGGTAGCAGGGCCTAGTAGCTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: RVACCWPNRESWART*FSLLLGVAGPSSFV Trigger: TACGAAGCTACTAGGCCCTGCTACCCCAAGGAGCAAGGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS CCA 90 bp | AGGCAGGCTGCGCGCCCAGCCTGGGATCCCGCTCTTTCGAGCTCCTaGAGCTCCTCTCTGCAGGAAAGGTGTCTAGGATGCCGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQAARPAWDPALSSS*SSSLQERCLGCRLP Trigger: AGGAAGACGGCATCCTAGACACCTTTCCTGCAGAGAGGAGCTCCAGGAGCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGCCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 90 bp | CTTCTTGGGAGGTTCCTCCTCCGACAGCTTCGAGTCGCCTGCTGCTaGCCCAACCGAGAGTCCTGGGCTCGGACGTGCTTCTCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGRFLLRQLRVACC*PNRESWARTCFSLL Trigger: GAGCAAGGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAGGAGGAACCTCCCAAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS GCA 90 bp | CTTCTTCTTGGGAGGTTCCTCCTCCGACAGCTTCGAGTCGCCTGCTaGTGGCCCAACCGAGAGTCCTGGGCTCGGACGTGCTTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LLLGRFLLRQLRVAC*WPNRESWARTCFSL Trigger: CAAGGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAGGAGGAACCTCCCAAGAAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS GCA 90 bp | ATGCTTCTTCTTGGGAGGTTCCTCCTCCGACAGCTTCGAGTCGCCTaGTGCTGGCCCAACCGAGAGTCCTGGGCTCGGACGTGCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: MLLLGRFLLRQLRVA*CWPNRESWARTCFS Trigger: GGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAGGAGGAACCTCCCAAGAAGAAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS CCA 90 bp | GGCTGCGGAGCAGGTGGCCAGCGAGCGAGAAGCTCCCGTCCGCCATaGCATCTCCCAAAGCTTTACACTCCGGACCATCTTCAGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: GCGAGGQRARSSRPP*HLPKLYTPDHLQAL Trigger: AAGTGCCTGAAGATGGTCCGGAGTGTAAAGCTTTGGGAGATGCCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237506.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCGCCCAAGGCTGGCTGGCGGCTTGCAGCAGGGCTAGCAAAGAAAAGTTCGCCTGGATGTGCTCTTaGGCCTTCAGGCGCAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: CPAQGWLAACSRASKEKFAWMCS*AFRRRA Trigger: CGCTCTGCGCCTGAAGGCCAAAGAGCACATCCAGGC...GAACTTTTCTTTGCTAGCCCTGCTGCAAGCCGCCAGCCAGCCTTGGGCGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| CDS-3UTR CAA 90 bp | TGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCCCGTTCGGGTAGGTTAACCTaGCCGGCCAGCTCTTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: CSFMDDTSSFSWRLHLARSGRLT*PASSSR Trigger: CCGCGAAGAGCTGGCCGGCAAGGTTAACCTACCCGA...ACGGGCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
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| CDS-3UTR CAA 90 bp | GCGGTGTGGACAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTAGGATGCCGTCTTCCTaGGTAAAGCCCAGGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: AVWTAGPAVCPSDSEAEFRMPSS*VKPRMA Trigger: AGCCATCCTGGGCTTTACCAAGGAAGACGGCATCCT...AAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTGTCCACACCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| CDS-3UTR CAA 90 bp | CAGCGGGACCCGCAGTTTGTCCCTCTGACAGCGAGGCTGAATTTCCGTTTGGCCAGGATGCCGTCTTCCTaGGTAAAGCCCAGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRDPQFVPLTARLNFRLARMPSS*VKPRMA Trigger: AGCCATCCTGGGCTTTACCAAGGAAGACGGCATCCT...GGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCCCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| CDS-3UTR CAA 90 bp | AGGGGAGAATCCTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCAGGATGCCGTCTTCCTaGGTAAAGCCCAGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGESCSFMDDTSSFSWRLRMPSS*VKPRMA Trigger: AGCCATCCTGGGCTTTACCAAGGAAGACGGCATCCT...GAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGATTCTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235720.2 ENSMUST00000238035.2 |
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| CDS-3UTR CAA 90 bp | ATCCTGCAGCTTCATGGACGACACTTCCAGTTTCTCCTGGCGCCTCCACTTAGCCGTCGATGCTTCTTCTaGGGAGGTTCCTCCTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILQLHGRHFQFLLAPPLSRRCFF*GGSSSD Trigger: GTCGGAGGAGGAACCTCCCAAGAAGAAGCATCGACG...GCTAAGTGGAGGCGCCAGGAGAAACTGGAAGTGTCGTCCATGAAGCTGCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
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| CDS-3UTR CAA 90 bp | ATTTTTCTCACTCCCCATTCCTGCCGTCCGGAACATCCCAGGTCAAGATCCTTGTCGGGTAGGTTAACCTaGCCGGCCAGCTCTTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLTPHSCRPEHPRSRSLSGRLT*PASSSR Trigger: CCGCGAAGAGCTGGCCGGCAAGGTTAACCTACCCGA...CAAGGATCTTGACCTGGGATGTTCCGGACGGCAGGAATGGGGAGTGAGAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025396.5 |
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| CDS-3UTR CAA 90 bp | ATTCTCAGATGCATTGAATTCGCTCTCACCGTCTCCCTCTCAGGCCCCTGTAAAGTGAACGTCGTGCGGTaGCGTCGATGCTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILRCIEFALTVSLSGPCKVNVVR*RRCFFL Trigger: CAAGAAGAAGCATCGACGCAACCGCACGACGTTCAC...TTTACAGGGGCCTGAGAGGGAGACGGTGAGAGCGAATTCAATGCATCTGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235720.2 |
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| CDS CCA 72 bp | CTGGTGGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTaGGGCAGGCAGGCTGCGCGCCCAGCCTGGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: LVGKTRSLRLAP*GRQAARPAWDP Trigger: GGGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS GCA 72 bp | TCGGAGCCTCCGGCTGGCGCCTTGGGGCAGGCAGGCTaGGCGCCCAGCCTGGGATCCCGCTCTTTCGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SEPPAGALGQAG*APSLGSRSFEL Trigger: GAGCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAAGGCGCCAGCCGGAGGCTCCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 72 bp | AAACGCGACGTGCTCCCGCCCGGGCTGCGGAGCAGGTaGCCAGCGAGCGAGAAGCTCCCGTCCGCCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KRDVLPPGLRSR*PASEKLPSAMA Trigger: AGCCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025396.5 ENSMUST00000238035.2 |
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| CDS CCA 72 bp | AAACGCGACGTGCTCCCGCCCGGGCTGCGGAGCAGGTaGCCAGCGAGCGAGAAGCTCCCGTCCGCCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KRDVLPPGLRSR*PASEKLPSAMA Trigger: TGCCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237506.2 |
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| CDS GCA 72 bp | CGATGCTGTGCAAACGCGACGTGCTCCCGCCCGGGCTaGGGAGCAGGTGGCCAGCGAGCGAGAAGCTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RCCANATCSRPG*GAGGQRARSSR Trigger: ACGGGAGCTTCTCGCTCGCTGGCCACCTGCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACAGCATCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 72 bp | CTGGCGCCTTGGGGCAGGCAGGCTGCGCGCCCAGCCTaGGATCCCGCTCTTTCGAGCTCCTGGAGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAPWGRQAARPA*DPALSSSWSSS Trigger: AGAGGAGCTCCAGGAGCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGCAGCCTGCCTGCCCCAAGGCGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CCA 72 bp | AGCTTCGTACTCCGGGACGAATCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFVLRDESRGCW*GRLGASGWRLG Trigger: CCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGATTCGTCCCGGAGTACGAAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS CCA 72 bp | ACCTTCGTACTCCGGGACGAATCCCGGGGCTGCTGGTaGGGAAGACTCGGAGCCTCCGGCTGGCGCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TFVLRDESRGCW*GRLGASGWRLG Trigger: CCCAAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGATTCGTCCCGGAGTACGAAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| CDS GCA 72 bp | GGGAGGTTCCTCCTCCGACAGCTTCGAGTCGCCTGCTaGTGGCCCAACCGAGAGTCCTGGGCTCGGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRFLLRQLRVAC*WPNRESWARTC Trigger: GCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAGGAGGAACCTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS GCA 72 bp | CTTGGGAGGTTCCTCCTCCGACAGCTTCGAGTCGCCTaGTGCTGGCCCAACCGAGAGTCCTGGGCTCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LGRFLLRQLRVA*CWPNRESWART Trigger: CGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAGGAGGAACCTCCCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS GCA 72 bp | AACCATACCTTCGTACTCCGGGACGAATCCCGGGGCTaGTGGTGGGGAAGACTCGGAGCCTCCGGCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: NHTFVLRDESRG*WWGRLGASGWR Trigger: GCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGATTCGTCCCGGAGTACGAAGGTATGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| CDS CCA 72 bp | CATACCTTCGTACTCCGGGACGAATCCCGGGGCTGCTaGTGGGGAAGACTCGGAGCCTCCGGCTGGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HTFVLRDESRGC*WGRLGASGWRL Trigger: AAGGCGCCAGCCGGAGGCTCCGAGTCTTCCCCACCAGCAGCCCCGGGATTCGTCCCGGAGTACGAAGGTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238035.2 |
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| CDS CCA 72 bp | AGGTTCCTCCTCCGACAGCTTCGAGTCGCCTGCTGCTaGCCCAACCGAGAGTCCTGGGCTCGGACGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RFLLRQLRVACC*PNRESWARTCF Trigger: GAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCAGGCGACTCGAAGCTGTCGGAGGAGGAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS GCA 72 bp | TCTTCCTTGGTAAAGCCCAGGATGGCTTCGATGCTGTaGAAACGCGACGTGCTCCCGCCCGGGCTGCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLVKPRMASML*KRDVLPPGLRS Trigger: GCTCCGCAGCCCGGGCGGGAGCACGTCGCGTTTGCACAGCATCGAAGCCATCCTGGGCTTTACCAAGGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS GCA 72 bp | TGCTGCTGGCCCAACCGAGAGTCCTGGGCTCGGACGTaGTTCTCCTTGCTCCTTGGGGTAGCAGGGCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: CCWPNRESWART*FSLLLGVAGPS Trigger: ACTAGGCCCTGCTACCCCAAGGAGCAAGGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS CCA 72 bp | GCGCGCCCAGCCTGGGATCCCGCTCTTTCGAGCTCCTaGAGCTCCTCTCTGCAGGAAAGGTGTCTAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: ARPAWDPALSSS*SSSLQERCLGC Trigger: GCATCCTAGACACCTTTCCTGCAGAGAGGAGCTCCAGGAGCTCGAAAGAGCGGGATCCCAGGCTGGGCGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 ENSMUST00000238035.2 |
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| CDS CAA 90 bp | TGCTGCTGGCCCAACCGAGAGTCCTGGGCTCGGACGTGCTTCTCCTaGCTCCTTGGGGTAGCAGGGCCTAGTAGCTTCGTACTCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CCWPNRESWARTCFS*LLGVAGPSSFVLRD Trigger: GTCCCGGAGTACGAAGCTACTAGGCCCTGCTACCCCAAGGAGCAAGGAGAAGCACGTCCGAGCCCAGGACTCTCGGTTGGGCCAGCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025396.5 ENSMUST00000235720.2 ENSMUST00000237506.2 |
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| CDS CCA 72 bp | GCAGGTGGCCAGCGAGCGAGAAGCTCCCGTCCGCCATaGCATCTCCCAAAGCTTTACACTCCGGACCATCTT | + |
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Preference number: 6 (lower is better) Translates to: AGGQRARSSRPP*HLPKLYTPDHL Trigger: AAGATGGTCCGGAGTGTAAAGCTTTGGGAGATGCCATGGCGGACGGGAGCTTCTCGCTCGCTGGCCACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237506.2 |
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