Pregenerated sensors for RAVER2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035275Ensembl transcript IDs: ENSMUST00000038463.15, ENSMUST00000106955.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTaGTCTGCTGGGGCTCGGCCCTGTCTAGGGACGAGACCTTCACTG | + |
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Preference number: 1 (lower is better) Translates to: CPTLSTASLRKGCVH*SAGARPCLGTRPSL Trigger: CAGTGAAGGTCTCGTCCCTAGACAGGGCCGAGCCCCAGCAGAGCAGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 90 bp | GGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTaGGACCTACAGGGTCGGGGAGAACCAGCAGCCCTCGCAAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLLQRGGLPQPGFKS*DLQGRGEPAALASC Trigger: ACAGCTTGCGAGGGCTGCTGGTTCTCCCCGACCCTGTAGGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR GCA 90 bp | CTTCAAGTCGGGAATGCTGAGACGGCTTACTACAGAGAGGTGGTTTaGCCCAGCCTGGGTTTAAATCCTGAGACCTACAGGGTCGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LQVGNAETAYYREVV*PSLGLNPETYRVGE Trigger: CTCCCCGACCCTGTAGGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGTCTCAGCATTCCCGACTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR TCA 90 bp | TGCCCTCGACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTaGTCTGCCTGCTGCATGACAGTTCCTTCTGGGAAGTCAGACACC | + |
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Preference number: 1 (lower is better) Translates to: CPRPVVFLIARWVFG*SACCMTVPSGKSDT Trigger: GGTGTCTGACTTCCCAGAAGGAACTGTCATGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTCGAGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR CCA 90 bp | TGTAGAGCTAATGGAGGCTGCATGATGAGCATCTGTTGTCACCACTaGGTGGTACTGCCACCCTTGCAGTTTGAGGAAAGACTACAGATG | + |
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Preference number: 1 (lower is better) Translates to: CRANGGCMMSICCHH*VVLPPLQFEERLQM Trigger: CATCTGTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAACAGATGCTCATCATGCAGCCTCCATTAGCTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR CCA 90 bp | GACTATTGGAATGCTGACTCTCCTGTGAGCGGAGTCCTTATCACGTaGATTAAGACACATCTAATGCTAGTGGAAATGCCCTCGACCAGT | + |
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Preference number: 1 (lower is better) Translates to: DYWNADSPVSGVLIT*IKTHLMLVEMPSTS Trigger: ACTGGTCGAGGGCATTTCCACTAGCATTAGATGTGTCTTAATCCACGTGATAAGGACTCCGCTCACAGGAGAGTCAGCATTCCAATAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 90 bp | GGCAATTTAAGCATTGCCTGGTCAACTTCAACAGTCAGAACGGACTaGGGAGTTATTTGGTCCCTGGATGAGCTGGGCTTTGATGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: GNLSIAWSTSTVRTD*GVIWSLDELGFDVR Trigger: TCTTACATCAAAGCCCAGCTCATCCAGGGACCAAATAACTCCTCAGTCCGTTCTGACTGTTGAAGTTGACCAGGCAATGCTTAAATTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR TCA 90 bp | TGGATTAAGCGGCCATTTCCTTTCAGCTTAACAACTACCAAAGAGTaGGTAAATAACCAGAGTGAGGTAGAGCCTGTTAGCTCAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: WIKRPFPFSLTTTKE*VNNQSEVEPVSSEL Trigger: CAGTTCTGAGCTAACAGGCTCTACCTCACTCTGGTTATTTACTCACTCTTTGGTAGTTGTTAAGCTGAAAGGAAATGGCCGCTTAATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 90 bp | CTAAGGAAACAACAGTTTCCCAGTTATTGCTTCAGACTTTATATATaGTGTCAAAATTGTTCCCAGGCCCGAAACAAGGACTATTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: LRKQQFPSYCFRLYI*CQNCSQARNKDYWN Trigger: ATTCCAATAGTCCTTGTTTCGGGCCTGGGAACAATTTTGACATCATATATAAAGTCTGAAGCAATAACTGGGAAACTGTTGTTTCCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR CCA 90 bp | TCAAAAGTCAGACAAATAAAGACAAGTGTTCTTTCAGAAGTGAATTaGATTAAGCGGCCATTTCCTTTCAGCTTAACAACTACCAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SKVRQIKTSVLSEVN*IKRPFPFSLTTTKE Trigger: CTCTTTGGTAGTTGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACTTGTCTTTATTTGTCTGACTTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 90 bp | CAATATCAAACCCAGATGTGGCAACGGGGCTCTTTACATTTTAAATaGCCAAGATTCAAACTTAATTATCCTATGAGAAAGAGAGGAATA | + |
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Preference number: 1 (lower is better) Translates to: QYQTQMWQRGSLHFK*PRFKLNYPMRKRGI Trigger: TATTCCTCTCTTTCTCATAGGATAATTAAGTTTGAATCTTGGTCATTTAAAATGTAAAGAGCCCCGTTGCCACATCTGGGTTTGATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTACGGCAGGGAAACCCTaGCTCCTTGCTATGCACATC | + |
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Preference number: 2 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTTAGKP*LLAMHI Trigger: GATGTGCATAGCAAGGAGCCAGGGTTTCCCTGCCGT...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTGGTGTATATGGTAAATaGTACTCCGGAAGTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTGVYGK*YSGSEA Trigger: TGCTTCACTTCCGGAGTATCATTTACCATATACACC...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTGATCTGCCTGCTGCATaGCAGTTCCTTCTGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSDLPAA*QFLLGS Trigger: ACTTCCCAGAAGGAACTGTCATGCAGCAGGCAGATC...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTCCATTGCAGGCTCTGTaGTTCTCGAGGCTACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSPLQAL*FSRLLS Trigger: ACTGAGTAGCCTCGAGAACCACAGAGCCTGCAATGG...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR CCA 90 bp | ACGGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTGAGACCGGGACTGTCTCTTCTTaGCATGGAGGCAAACCCATT | + |
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Preference number: 2 (lower is better) Translates to: TAYYREVVCPSLGLNPETGTVSS*HGGKPI Trigger: AATGGGTTTGCCTCCATGCCAAGAAGAGACAGTCCC...GGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTAGAAATGTCCTCACTTaGTTCACAGGCAGCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSRNVLT*FTGSTK Trigger: CTTTGTGCTGCCTGTGAATCAAGTGAGGACATTTCT...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTAGAGCTAATGGAGGCTaGATGATGAGCATCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSRANGG*MMSICC Trigger: ACAACAGATGCTCATCATGCAGCCTCCATTAGCTCT...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR GCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTACCACTGGGTGGTACTaGCACCCTTGCAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: NDTPEVKHLKSHHFHSATTTGWY*HPCSLR Trigger: CCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGT...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | GTACTAACATCACTTGATTTGCATTTCTGTCTTGTAATAACGGGCACAGGCTGGCACTGCTGTATGCTATaGGACGGCAGGGAAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLTSLDLHFCLVITGTGWHCCML*DGRETL Trigger: CAGGGTTTCCCTGCCGTCTCATAGCATACAGCAGTG...CCAGCCTGTGCCCGTTATTACAAGACAGAAATGCAAATCAAGTGATGTTAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR GCA 90 bp | AGGATCATTGAGATCCTACACTTCATCAGTTGTAGTCTCTTAACAATGAACACACTGTGTGCACTGCTCTaGTGGGGCTCGGCCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RIIEILHFISCSLLTMNTLCALL*WGSALS Trigger: AGACAGGGCCGAGCCCCAGCAGAGCAGTGCACACAG...TGTGTTCATTGTTAAGAGACTACAACTGATGAAGTGTAGGATCTCAATGATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR CCA 90 bp | AGGATCATTGAGATCCTACACTTCATCAGTTGTAGTCTCTTAACAATGAACACATGTGCACTGCTCTGCTaGGGCTCGGCCCTGTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: RIIEILHFISCSLLTMNTCALLC*GSALSR Trigger: CCTAGACAGGGCCGAGCCCCAGCAGAGCAGTGCACA...TGTGTTCATTGTTAAGAGACTACAACTGATGAAGTGTAGGATCTCAATGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | GTACTAACATCACTTGATTTGCATTTCTGTCTTGTAATAACGGGCACAGGCTGGGGACTATTGGAATGCTaGCTCTCCTGTGAGCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VLTSLDLHFCLVITGTGWGLLEC*LSCERS Trigger: ACTCCGCTCACAGGAGAGTCAGCATTCCAATAGTCC...CCAGCCTGTGCCCGTTATTACAAGACAGAAATGCAAATCAAGTGATGTTAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTTACATAATATGTAAATaGGCAAGCCTCACTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSYIICK*ASLTVF Trigger: GAACACAGTGAGGCTTGCTCATTTACATATTATGTA...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR CCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTCATGACAGTTCCTTCTaGGAAGTCAGACACCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: NDTPEVKHLKSHHFHSATHDSSF*EVRHPY Trigger: ATACGGGTGTCTGACTTCCCAGAAGGAACTGTCATG...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCCAACATCATCTTGGGGACATTGAAACTGCAGTTTCATGTTGTAAGTCCTGGTACTGCCACCCTTaGAGTTTGAGGAAAGACTAC | + |
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Preference number: 2 (lower is better) Translates to: CSQHHLGDIETAVSCCKSWYCHP*SLRKDY Trigger: GTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCA...GGACTTACAACATGAAACTGCAGTTTCAATGTCCCCAAGATGATGTTGGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR GCA 90 bp | AGGATCATTGAGATCCTACACTTCATCAGTTGTAGTCTCTTAACAATGAACACAGAGAGTAAACGCCCCTaGCATTGCAGGCTCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RIIEILHFISCSLLTMNTESKRP*HCRLCG Trigger: ACCACAGAGCCTGCAATGGCAGGGGCGTTTACTCTC...TGTGTTCATTGTTAAGAGACTACAACTGATGAAGTGTAGGATCTCAATGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAGCCACCCTTGCAGTTTaGGGAAAGACTACAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: TSVLSEVNWIKRPFPFSLATLAV*GKTTDE Trigger: CTCATCTGTAGTCTTTCCTCAAACTGCAAGGGTGGC...TAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | GTACTAACATCACTTGATTTGCATTTCTGTCTTGTAATAACGGGCACAGGCTGGTCATCTTGGGGACATTaGAACTGCAGTTTCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: VLTSLDLHFCLVITGTGWSSWGH*NCSFML Trigger: CAACATGAAACTGCAGTTTCAATGTCCCCAAGATGA...CCAGCCTGTGCCCGTTATTACAAGACAGAAATGCAAATCAAGTGATGTTAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAGTTTTTCAAAATGACAGACTCCCATCCTACCAAGGAAACTCGTGGCAATCAGTGAAATTGAAATaGAGACAAGAGTCATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: VKVFQNDRLPSYQGNSWQSVKLK*RQESCA Trigger: GGCACATGACTCTTGTCTGCATTTCAATTTCACTGA...TTGCCACGAGTTTCCTTGGTAGGATGGGAGTCTGTCATTTTGAAAAACTTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACATTGGCTTATACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCCGAAACAAGGACTATTaGAATGCTGACTCTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: CTLAYTKFILRLRKQQFPRNKDY*NADSPV Trigger: CACAGGAGAGTCAGCATTCCAATAGTCCTTGTTTCG...GGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTATAAGCCAATGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR TCA 90 bp | CACTTAATACCAAGATCTTCGGCAAAGGGTGAAGTCAAAAGTCAGACAAATAAAAGGATATGGCTAGTGTaGATGAAGTTAAGGCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: HLIPRSSAKGEVKSQTNKRIWLV*MKLRQR Trigger: TCGCTGCCTTAACTTCATTCACACTAGCCATATCCT...TTTATTTGTCTGACTTTTGACTTCACCCTTTGCCGAAGATCTTGGTATTAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR-3UTR CCA 90 bp | AGGATCATTGAGATCCTACACTTCATCAGTTGTAGTCTCTTAACAATGAACACAAATGCCCTCGACCAGTaGTGTTTCTTATTGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: RIIEILHFISCSLLTMNTNALDQ*CFLLLG Trigger: ACCTAGCAATAAGAAACACCACTGGTCGAGGGCATT...TGTGTTCATTGTTAAGAGACTACAACTGATGAAGTGTAGGATCTCAATGATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR CAA 90 bp | TACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCAGTTATaGCTTCAGACTTTATATATGATGTCAAAATTGTTCCCAGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: YEIHSKAKETTVSQL*LQTLYMMSKLFPGP Trigger: CGGGCCTGGGAACAATTTTGACATCATATATAAAGTCTGAAGCAATAACTGGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR GCA 72 bp | CACGGCCTCCCTCAGGAAGGGCTGTGTGCACTGCTCTaGTGGGGCTCGGCCCTGTCTAGGGACGAGACCTTC | + |
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Preference number: 3 (lower is better) Translates to: HGLPQEGLCALL*WGSALSRDETF Trigger: GAAGGTCTCGTCCCTAGACAGGGCCGAGCCCCAGCAGAGCAGTGCACACAGCCCTTCCTGAGGGAGGCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR GCA 72 bp | CTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTaGTCTGCTGGGGCTCGGCCCTGTCTAGGGACGAGA | + |
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Preference number: 3 (lower is better) Translates to: LSTASLRKGCVH*SAGARPCLGTR Trigger: TCTCGTCCCTAGACAGGGCCGAGCCCCAGCAGAGCAGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR CCA 72 bp | GGCCTCCCTCAGGAAGGGCTGTGTGCACTGCTCTGCTaGGGCTCGGCCCTGTCTAGGGACGAGACCTTCACT | + |
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Preference number: 3 (lower is better) Translates to: GLPQEGLCALLC*GSALSRDETFT Trigger: AGTGAAGGTCTCGTCCCTAGACAGGGCCGAGCCCCAGCAGAGCAGTGCACACAGCCCTTCCTGAGGGAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR CCA 72 bp | TGCCGTGAGCCCAATGGGCAGCGTGTCAGCGGCAGATaGAGCGGTGTCTTCTGGCGCTGCTGTGAACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CREPNGQRVSGR*SGVFWRCCEPA Trigger: TGCAGGTTCACAGCAGCGCCAGAAGACACCGCTCCATCTGCCGCTGACACGCTGCCCATTGGGCTCACGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR TCA 72 bp | CAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTaGGACCTACAGGGTCGGGGAGAACCAGCAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QRGGLPQPGFKS*DLQGRGEPAAL Trigger: GAGGGCTGCTGGTTCTCCCCGACCCTGTAGGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR CCA 72 bp | GAGGTGCAGGGTCAGAGCACACCATTAGTCATCTGCTaGGACCTCGTGCTGGTCATCACCTATAGGAAGCGT | + |
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Preference number: 3 (lower is better) Translates to: EVQGQSTPLVIC*DLVLVITYRKR Trigger: ACGCTTCCTATAGGTGATGACCAGCACGAGGTCCCAGCAGATGACTAATGGTGTGCTCTGACCCTGCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 72 bp | GCACAGGCTGGCATAGTGGAGGACCCACATGGAATGTaGAGTGTCTCTAAGTTCCCTCCACTGCTTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: AQAGIVEDPHGM*SVSKFPPLLPP Trigger: AGGAGGAAGCAGTGGAGGGAACTTAGAGACACTTCACATTCCATGTGGGTCCTCCACTATGCCAGCCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR GCA 72 bp | GGGAATGCTGAGACGGCTTACTACAGAGAGGTGGTTTaGCCCAGCCTGGGTTTAAATCCTGAGACCTACAGG | + |
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Preference number: 3 (lower is better) Translates to: GNAETAYYREVV*PSLGLNPETYR Trigger: CCTGTAGGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGTCTCAGCATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR TCA 72 bp | TTGTTCCCAGGCCCGAAACAAGGACTATTGGAATGCTaGCTCTCCTGTGAGCGGAGTCCTTATCACGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LFPGPKQGLLEC*LSCERSPYHVD Trigger: ATCCACGTGATAAGGACTCCGCTCACAGGAGAGTCAGCATTCCAATAGTCCTTGTTTCGGGCCTGGGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 72 bp | CTCCCCTACCCCCAGACGTTTAGAAATGTCCTCACTTaGTTCACAGGCAGCACAAAGCTAGGTGGTGGACTA | + |
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Preference number: 3 (lower is better) Translates to: LPYPQTFRNVLT*FTGSTKLGGGL Trigger: TAGTCCACCACCTAGCTTTGTGCTGCCTGTGAATCAAGTGAGGACATTTCTAAACGTCTGGGGGTAGGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR GCA 72 bp | CACATGGAATGTGAAGTGTCTCTAAGTTCCCTCCACTaGTTCCTCCTCACACTGCAGCTCCCAGATAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: HMECEVSLSSLH*FLLTLQLPDSS Trigger: ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGACACTTCACATTCCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR GCA 72 bp | TTCTTCAGTGAAATTGAAATGCAGACAAGAGTCATGTaGCGTGAGCCCAATGGGCAGCGTGTCAGCGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FFSEIEMQTRVM*REPNGQRVSGR Trigger: TCTGCCGCTGACACGCTGCCCATTGGGCTCACGGCACATGACTCTTGTCTGCATTTCAATTTCACTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| 3UTR CCA 72 bp | AATGGAGGCTGCATGATGAGCATCTGTTGTCACCACTaGGTGGTACTGCCACCCTTGCAGTTTGAGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: NGGCMMSICCHH*VVLPPLQFEER Trigger: TCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAACAGATGCTCATCATGCAGCCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| 3UTR TCA 72 bp | CCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTaGTCTGCCTGCTGCATGACAGTTCCTTCTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PVVFLIARWVFG*SACCMTVPSGK Trigger: CTTCCCAGAAGGAACTGTCATGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR TCA 72 bp | TGGTCCCTGGATGAGCTGGGCTTTGATGTAAGAGACTaGGGTGTGACGTCTGTTGGCAGAACTGAAATCATC | + |
|
Preference number: 3 (lower is better) Translates to: WSLDELGFDVRD*GVTSVGRTEII Trigger: GATGATTTCAGTTCTGCCAACAGACGTCACACCTCAGTCTCTTACATCAAAGCCCAGCTCATCCAGGGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| 3UTR TCA 72 bp | AGCATTGCCTGGTCAACTTCAACAGTCAGAACGGACTaGGGAGTTATTTGGTCCCTGGATGAGCTGGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SIAWSTSTVRTD*GVIWSLDELGF Trigger: AAAGCCCAGCTCATCCAGGGACCAAATAACTCCTCAGTCCGTTCTGACTGTTGAAGTTGACCAGGCAATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| 3UTR CCA 72 bp | CCTCACTTGATTCACAGGCAGCACAAAGCTAGGTGGTaGACTACATGTGGCCCTAGTGTGTATTCTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PHLIHRQHKARW*TTCGPSVYSAN Trigger: GTTAGCAGAATACACACTAGGGCCACATGTAGTCCACCACCTAGCTTTGTGCTGCCTGTGAATCAAGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CCA 72 bp | TGTCCTCACTTGATTCACAGGCAGCACAAAGCTAGGTaGTGGACTACATGTGGCCCTAGTGTGTATTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPHLIHRQHKAR*WTTCGPSVYSA Trigger: AGCAGAATACACACTAGGGCCACATGTAGTCCACCACCTAGCTTTGTGCTGCCTGTGAATCAAGTGAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR GCA 72 bp | GTTGGTCTTATGTGGCTTTGTAGAGCTAATGGAGGCTaGATGATGAGCATCTGTTGTCACCACTGGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VGLMWLCRANGG*MMSICCHHWVV Trigger: TACCACCCAGTGGTGACAACAGATGCTCATCATGCAGCCTCCATTAGCTCTACAAAGCCACATAAGACCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CCA 72 bp | ATTTGGCTGATCTGCCTGCTGCATGACAGTTCCTTCTaGGAAGTCAGACACCCGTATAGAAAGGATATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IWLICLLHDSSF*EVRHPYRKDMA Trigger: AGCCATATCCTTTCTATACGGGTGTCTGACTTCCCAGAAGGAACTGTCATGCAGCAGGCAGATCAGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CCA 72 bp | TGTCAAAATTGTTCCCAGGCCCGAAACAAGGACTATTaGAATGCTGACTCTCCTGTGAGCGGAGTCCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: CQNCSQARNKDY*NADSPVSGVLI Trigger: GATAAGGACTCCGCTCACAGGAGAGTCAGCATTCCAATAGTCCTTGTTTCGGGCCTGGGAACAATTTTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGTTTTTCAAAATGACAGACTCCCATCCTACCAAGGAAACTCGTGGCAAAGGGACTGTCTCTTCTaGGCATGGAGGCAAACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VKVFQNDRLPSYQGNSWQRDCLF*AWRQTH Trigger: ATGGGTTTGCCTCCATGCCAAGAAGAGACAGTCCCT...TTGCCACGAGTTTCCTTGGTAGGATGGGAGTCTGTCATTTTGAAAAACTTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| 3UTR TCA 72 bp | TTGTCACCACTGGGTGGTACTGCCACCCTTGCAGTTTaGGGAAAGACTACAGATGAGACTATTTTTAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSPLGGTATLAV*GKTTDETIFRG Trigger: TCCCCTAAAAATAGTCTCATCTGTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR GCA 72 bp | GGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTaGCACTGGGTTGGTCTTATGTGGCTTTGTAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSEASEVTSLSL*HWVGLMWLCRA Trigger: AGCTCTACAAAGCCACATAAGACCAACCCAGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CCA 72 bp | AATGCTGACTCTCCTGTGAGCGGAGTCCTTATCACGTaGATTAAGACACATCTAATGCTAGTGGAAATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NADSPVSGVLIT*IKTHLMLVEMP Trigger: GGGCATTTCCACTAGCATTAGATGTGTCTTAATCCACGTGATAAGGACTCCGCTCACAGGAGAGTCAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CCA 72 bp | TTCACTGCTGTATGCTATGAGACGGCAGGGAAACCCTaGCTCCTTGCTATGCACATCTCCCATAAGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FTAVCYETAGKP*LLAMHISHKIK Trigger: TTTTATCTTATGGGAGATGTGCATAGCAAGGAGCCAGGGTTTCCCTGCCGTCTCATAGCATACAGCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CCA 72 bp | GAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTaGGTTGGTCTTATGTGGCTTTGTAGAGCTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EASEVTSLSLCH*VGLMWLCRANG Trigger: TCCATTAGCTCTACAAAGCCACATAAGACCAACCCAGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR TCA 72 bp | CGGCCATTTCCTTTCAGCTTAACAACTACCAAAGAGTaGGTAAATAACCAGAGTGAGGTAGAGCCTGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RPFPFSLTTTKE*VNNQSEVEPVS Trigger: GCTAACAGGCTCTACCTCACTCTGGTTATTTACTCACTCTTTGGTAGTTGTTAAGCTGAAAGGAAATGGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAACTCACTCTGCCACTGGGTaGGTCTTATGTGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VLSEVNWIKRPFPFSLTTHSATG*VLCGFV Trigger: TACAAAGCCACATAAGACCAACCCAGTGGCAGAGTG...AGTTGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR-3UTR CAA 90 bp | CACTTAATACCAAGATCTTCGGCAAAGGGTGAAGTCAAAAGTCAGACAAATAAACAGTGGTGTTTCTTATaGCTAGGTGGGTATTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLIPRSSAKGEVKSQTNKQWCFL*LGGYLA Trigger: AGCCAAATACCCACCTAGCAATAAGAAACACCACTG...TTTATTTGTCTGACTTTTGACTTCACCCTTTGCCGAAGATCTTGGTATTAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACATATATGATGTCAAAATaGTTCCCAGGCCCGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTYMMSK*FPGPKQ Trigger: TTGTTTCGGGCCTGGGAACAATTTTGACATCATATA...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR TCA 72 bp | AATACTTTGTTTTCCGCAAAAGGTGTATATGGTAAATaGTACTCCGGAAGTGAAGCATCTGAAGTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: NTLFSAKGVYGK*YSGSEASEVTS Trigger: TGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATTTACCATATACACCTTTTGCGGAAAACAAAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTATCGCCAGAGCAGGCTaGAGTACCATGGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTIARAG*STMAGG Trigger: GCCTCCTGCCATGGTACTGCAGCCTGCTCTGGCGAT...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTCAGGTCCGTTTTCAGTaGAAGCGGTGGCCCTATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTQVRFQ*KRWPYR Trigger: GCGATAGGGCCACCGCTTCCACTGAAAACGGACCTG...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | ACGGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTGAGACCCGTGCAGCCACCTCCTaGGGGTGCAGCGCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TAYYREVVCPSLGLNPETRAATS*GCSAAT Trigger: GGTGGCTGCGCTGCACCCCCAGGAGGTGGCTGCACG...GGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTCCGCATAGCTGGGGCTaGAGAAGAACTTGTAACATG | + |
|
Preference number: 4 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTPHSWG*RRTCNM Trigger: CATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGG...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTAGTGCTTCGCCCTGGTaGTCCTGGGGCGCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSSASPW*SWGAEG Trigger: TCCTTCTGCGCCCCAGGAGCACCAGGGCGAAGCACT...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTGCACTGTCAACTCTCTaGCTCGGAAAGAAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTALSTL*LGKKTD Trigger: ATCAGTTTTCTTTCCGAGGCAGAGAGTTGACAGTGC...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTCGCGCTGAGCTGCTATaGGGACTGCTAGAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSRAELL*GLLECF Trigger: GAAGCACTCTAGCAGTCCTCATAGCAGCTCAGCGCG...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGAGAGGAATACAGGTAAGCCATCTCCAAGCCTCGATGCCGACCACGTAATCGCCAGAGCAGGCTaGAGTACCATGGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKERNTGKPSPSLDADHVIARAG*STMAGG Trigger: GCCTCCTGCCATGGTACTGCAGCCTGCTCTGGCGAT...TACGTGGTCGGCATCGAGGCTTGGAGATGGCTTACCTGTATTCCTCTCTTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCACCACTGGGTGGTACTGCCACCCTTGCAGTTTGAGGAAAGACTACAGCAGGCTGCAGTACCATaGCAGGAGGCTCTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCHHWVVLPPLQFEERLQQAAVP*QEALPA Trigger: TGCTGGGAGAGCCTCCTGCCATGGTACTGCAGCCTG...CTGTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | ACGGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTGAGACCGCGCAGAAGGACAGTTaGACTTGGCTCCCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TAYYREVVCPSLGLNPETAQKDS*TWLPLM Trigger: CATCAAGGGGAGCCAAGTTCAACTGTCCTTCTGCGC...GGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTTGGGACTCACTTCCCTaGGAGATCGCATCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSWDSLP*EIASRM Trigger: CATTCTGGATGCGATCTCTCAGGGAAGTGAGTCCCA...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGTTTTTCAAAATGACAGACTCCCATCCTACCAAGGAAACTCGTGGCAACATCCGCTGCAGCCGTaGAGCCACCTCCTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKVFQNDRLPSYQGNSWQHPLQP*SHLLGV Trigger: CACCCCCAGGAGGTGGCTGCACGGCTGCAGCGGATG...TTGCCACGAGTTTCCTTGGTAGGATGGGAGTCTGTCATTTTGAAAAACTTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | GTACTAACATCACTTGATTTGCATTTCTGTCTTGTAATAACGGGCACAGGCTGGTCCCGTCGCATCCGCTaGAGCCGTGCAGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSLDLHFCLVITGTGWSRRIR*SRAATS Trigger: GGAGGTGGCTGCACGGCTGCAGCGGATGCGACGGGA...CCAGCCTGTGCCCGTTATTACAAGACAGAAATGCAAATCAAGTGATGTTAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | TCTCTAAGTTCCCTCCACTGCTTCCTCCTCACACTGCAGCTCCCAGATAGCAGTCGGCATGCTCCGCAGTaGTATATTCAACCACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLHCFLLTLQLPDSSRHAPQ*YIQPPQ Trigger: TTGCGGTGGTTGAATATAGCACTGCGGAGCATGCCG...ACTGCTATCTGGGAGCTGCAGTGTGAGGAGGAAGCAGTGGAGGGAACTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | ACGGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTGAGACCGATGGTGATGCCATCTaGCACCTGCTGAACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAYYREVVCPSLGLNPETDGDAI*HLLNLF Trigger: GAAGAGGTTCAGCAGGTGGCAGATGGCATCACCATC...GGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTGCTCGAAGAACTTGTAACATaGCAGGGTTGTTTAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELPHAVHGLPQEGLCALLEELVT*QGCLNF Trigger: AAAGTTTAAACAACCCTGCCATGTTACAAGTTCTTC...GAGCAGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | GACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCAGCAAAGCCACCACCGTaGCTTCCTTCATCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQWCFLLLGGYLADLPAAAKPPP*LPSSCA Trigger: TGCACAGGATGAAGGAAGTCACGGTGGTGGCTTTGC...TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | TCTGGCGCTGCTGTGAACCTGCATAAAATATTAAAGCCCACCCAGCAGGGACTGGGCAGTAATCCCTTTTaGTTACTGTGCATCGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGAAVNLHKILKPTQQGLGSNPF*LLCIAR Trigger: GCGCGCGATGCACAGTAATCAAAAGGGATTACTGCC...CAGTCCCTGCTGGGTGGGCTTTAATATTTTATGCAGGTTCACAGCAGCGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGATGTGGCAACGGGGCTCTTTACATTTTAAATGACCAAGATTCAAACTCCCGTCGCATCCGCTaGAGCCGTGCAGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPRCGNGALYILNDQDSNSRRIR*SRAATS Trigger: GGAGGTGGCTGCACGGCTGCAGCGGATGCGACGGGA...GTTTGAATCTTGGTCATTTAAAATGTAAAGAGCCCCGTTGCCACATCTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGAGAGGAATACAGGTAAGCCATCTCCAAGCCTCGATGCCGACCACGTACGGCATGCTCCGCAGTaGTATATTCAACCACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EKERNTGKPSPSLDADHVRHAPQ*YIQPPQ Trigger: TTGCGGTGGTTGAATATAGCACTGCGGAGCATGCCG...TACGTGGTCGGCATCGAGGCTTGGAGATGGCTTACCTGTATTCCTCTCTTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGTCACCACTGGGTGGTACTGCCACCCTTGCAGTTTGAGGAAAGACTACAGGATGGTGATGCCATCTaGCACCTGCTGAACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCHHWVVLPPLQFEERLQDGDAI*HLLNLF Trigger: GAAGAGGTTCAGCAGGTGGCAGATGGCATCACCATC...CTGTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACACGTGCAGCCACCTCCTaGGGGTGCAGCGCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTRAATS*GCSAAT Trigger: GGTGGCTGCGCTGCACCCCCAGGAGGTGGCTGCACG...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | ACGGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTGAGACCCAAAGGCACTTAGAATaGATGAGCTCCGAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAYYREVVCPSLGLNPETQRHLE*MSSEAK Trigger: CTTGGCCTCGGAGCTCATCCATTCTAAGTGCCTTTG...GGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | GACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCAGCTCGTCCGCATAGCTaGGGCTGCAGAAGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQWCFLLLGGYLADLPAAARPHS*GCRRTC Trigger: ACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGC...TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGAGAGGAATACAGGTAAGCCATCTCCAAGCCTCGATGCCGACCACGTACAAACTCTTCTAAGGTaGAGGAGATGGGCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKERNTGKPSPSLDADHVQTLLR*RRWAGW Trigger: CCAACCTGCCCATCTCCTTCACCTTAGAAGAGTTTG...TACGTGGTCGGCATCGAGGCTTGGAGATGGCTTACCTGTATTCCTCTCTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAACTCATCCGCTGCAGCCGTaGAGCCACCTCCTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSEVNWIKRPFPFSLTTHPLQP*SHLLGV Trigger: CACCCCCAGGAGGTGGCTGCACGGCTGCAGCGGATG...AGTTGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGTTTTTCAAAATGACAGACTCCCATCCTACCAAGGAAACTCGTGGCAAGCCGAGGCTCCCATCTaGCTGCCCAGTAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKVFQNDRLPSYQGNSWQAEAPI*LPSSSS Trigger: ACTGGAGCTACTGGGCAGGCAGATGGGAGCCTCGGC...TTGCCACGAGTTTCCTTGGTAGGATGGGAGTCTGTCATTTTGAAAAACTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCAAACCCATTAACAACATATCAATATCAAACCCAGATGTGGCAACGGAGTGCTTCGCCCTGGTaGTCCTGGGGCGCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MEANPLTTYQYQTQMWQRSASPW*SWGAEG Trigger: TCCTTCTGCGCCCCAGGAGCACCAGGGCGAAGCACT...CCGTTGCCACATCTGGGTTTGATATTGATATGTTGTTAATGGGTTTGCCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | GCAGATGGAGCGGTGTCTTCTGGCGCTGCTGTGAACCTGCATAAAATATTAAAGGCTCGTCCGCATAGCTaGGGCTGCAGAAGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADGAVSSGAAVNLHKILKARPHS*GCRRTC Trigger: ACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGC...CTTTAATATTTTATGCAGGTTCACAGCAGCGCCAGAAGACACCGCTCCATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| 3UTR CAA 72 bp | GCTAGTGGAAATGCCCTCGACCAGTGGTGTTTCTTATaGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGNALDQWCFL*LGGYLADLPAA Trigger: TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTCGAGGGCATTTCCACTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTACTCACTCCGGTGTCCTaGGGGTGCTGGCCAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLSEVNWIKRPFPFSLLTPVS*GCWPAS Trigger: ACTCGCTGGCCAGCACCCTCAGGACACCGGAGTGAG...TAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGAGAGGAATACAGGTAAGCCATCTCCAAGCCTCGATGCCGACCACGTAGCACTGTCAACTCTCTaGCTCGGAAAGAAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKERNTGKPSPSLDADHVALSTL*LGKKTD Trigger: ATCAGTTTTCTTTCCGAGGCAGAGAGTTGACAGTGC...TACGTGGTCGGCATCGAGGCTTGGAGATGGCTTACCTGTATTCCTCTCTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTTCTGTGGGCTGCAGCTaGACTGTCAACTCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NDTPEVKHLKSHHFHSATSVGCS*TVNSLP Trigger: AGGCAGAGAGTTGACAGTGCAGCTGCAGCCCACAGA...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTTGGGAGCTGCTGTCCTaGGGCAGGTTTTTCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDTPEVKHLKSHHFHSATWELLS*GRFFTR Trigger: CCTAGTGAAAAACCTGCCCCAGGACAGCAGCTCCCA...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGATGTGGCAACGGGGCTCTTTACATTTTAAATGACCAAGATTCAAACCAGGCTGCAGTACCATaGCAGGAGGCTCTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPRCGNGALYILNDQDSNQAAVP*QEALPA Trigger: TGCTGGGAGAGCCTCCTGCCATGGTACTGCAGCCTG...GTTTGAATCTTGGTCATTTAAAATGTAAAGAGCCCCGTTGCCACATCTGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR TCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTGGCAGTAATCCCTTTTaGTTACTGTGCATCGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NDTPEVKHLKSHHFHSATGSNPF*LLCIAR Trigger: GCGCGCGATGCACAGTAATCAAAAGGGATTACTGCC...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCAAACCCATTAACAACATATCAATATCAAACCCAGATGTGGCAACGGTCTGTGGGCTGCAGCTaGACTGTCAACTCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MEANPLTTYQYQTQMWQRSVGCS*TVNSLP Trigger: AGGCAGAGAGTTGACAGTGCAGCTGCAGCCCACAGA...CCGTTGCCACATCTGGGTTTGATATTGATATGTTGTTAATGGGTTTGCCTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | TGCACATTGGCTTATACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCAGGCTCCCATCTGCCTaGCCAGTAGCTCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTLAYTKFILRLRKQQFPRLPSA*PVAPVW Trigger: CCAGACTGGAGCTACTGGGCAGGCAGATGGGAGCCT...GGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTATAAGCCAATGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | AGGATCATTGAGATCCTACACTTCATCAGTTGTAGTCTCTTAACAATGAACACAGCCGAGGCTCCCATCTaGCTGCCCAGTAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RIIEILHFISCSLLTMNTAEAPI*LPSSSS Trigger: ACTGGAGCTACTGGGCAGGCAGATGGGAGCCTCGGC...TGTGTTCATTGTTAAGAGACTACAACTGATGAAGTGTAGGATCTCAATGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAAGAAGAACGGCAGCATaGCCAGCCCGGCTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTRRTAA*PARLPM Trigger: CATTGGCAGCCGGGCTGGGCATGCTGCCGTTCTTCT...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTGATGCACTTCTCCAGTaGATGCTGGGACTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDTPEVKHLKSHHFHSATDALLQ*MLGLTS Trigger: GGAAGTGAGTCCCAGCATGCACTGGAGAAGTGCATC...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGCAAACCCATTAACAACATATCAATATCAAACCCAGATGTGGCAACGGTGGGAGCTGCTGTCCTaGGGCAGGTTTTTCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MEANPLTTYQYQTQMWQRWELLS*GRFFTR Trigger: CCTAGTGAAAAACCTGCCCCAGGACAGCAGCTCCCA...CCGTTGCCACATCTGGGTTTGATATTGATATGTTGTTAATGGGTTTGCCTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | GACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCATCATCCTGTGCAAGCTaGCAAAACACAGGTTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: DQWCFLLLGGYLADLPAASSCAS*QNTGLW Trigger: CCATAAACCTGTGTTTTGCCAGCTTGCACAGGATGA...TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAAGCAGGGAGCTGGTTTaGGAAGAACGGCAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTSRELV*EERQHA Trigger: GGCATGCTGCCGTTCTTCTCAAACCAGCTCCCTGCT...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | AATGAGCAAGCCTCACTGTGTTCCCAACATCATCTTGGGGACATTGAAACTGCATGGTTCTCCCAAGAGTaGAGTCTGATTCTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NEQASLCSQHHLGDIETAWFSQE*SLILRG Trigger: GCCTCTAAGAATCAGACTTCACTCTTGGGAGAACCA...TGCAGTTTCAATGTCCCCAAGATGATGTTGGGAACACAGTGAGGCTTGCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | GTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAACTCCTTTTGGCTGGCTCTaGGGTGTCTTCTGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSEVNWIKRPFPFSLTTPFGWL*GVFWLP Trigger: GGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGG...AGTTGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | GTACTAACATCACTTGATTTGCATTTCTGTCTTGTAATAACGGGCACAGGCTGGAACCTCTGTGCCTTTTaGCTGGCTCTGCGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSLDLHFCLVITGTGWNLCAF*LALRCL Trigger: AAGACACCGCAGAGCCAGCCAAAAGGCACAGAGGTT...CCAGCCTGTGCCCGTTATTACAAGACAGAAATGCAAATCAAGTGATGTTAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CAA 72 bp | AGCATCTGTTGTCACCACTGGGTGGTACTGCCACCCTaGCAGTTTGAGGAAAGACTACAGATGAGACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SICCHHWVVLPP*QFEERLQMRLF Trigger: AAATAGTCTCATCTGTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAACAGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CAA 72 bp | CATCTGAAGTCACATCACTTTCACTCTGCCACTGGGTaGGTCTTATGTGGCTTTGTAGAGCTAATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLKSHHFHSATG*VLCGFVELMEA Trigger: AGCCTCCATTAGCTCTACAAAGCCACATAAGACCAACCCAGTGGCAGAGTGAAAGTGATGTGACTTCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCAACATCATCTTGGGGACATTGAAACTGCAGTTTCATGTTGTAAGTCCTCCTGTAATAACTCATaGACCTCCTGGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSQHHLGDIETAVSCCKSSCNNS*TSWELL Trigger: CAGCAGCTCCCAGGAGGTTCATGAGTTATTACAGGA...GGACTTACAACATGAAACTGCAGTTTCAATGTCCCCAAGATGATGTTGGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGCAAACCCATTAACAACATATCAATATCAAACCCAGATGTGGCAACGGTCCTGTAATAACTCATaGACCTCCTGGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MEANPLTTYQYQTQMWQRSCNNS*TSWELL Trigger: CAGCAGCTCCCAGGAGGTTCATGAGTTATTACAGGA...CCGTTGCCACATCTGGGTTTGATATTGATATGTTGTTAATGGGTTTGCCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR TCA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTCCCAAGAGTGAAGTCTaGTTCTTAGAGGCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDTPEVKHLKSHHFHSATPKSEV*FLEATS Trigger: AGAGGTTGCCTCTAAGAATCAGACTTCACTCTTGGG...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTCAACAGGACTTAATTTTACAAATGCTAGCTCTTCCTTTTATACGAGCAGGCTCCCATCTGCCTaGCCAGTAGCTCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKSTGLNFTNASSSFYTSRLPSA*PVAPVW Trigger: CCAGACTGGAGCTACTGGGCAGGCAGATGGGAGCCT...GCTCGTATAAAAGGAAGAGCTAGCATTTGTAAAATTAAGTCCTGTTGACTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCAAACCCATTAACAACATATCAATATCAAACCCAGATGTGGCAACGGCCGCATAGCTGGGGCTaGAGAAGAACTTGTAACATG | + |
|
Preference number: 4 (lower is better) Translates to: MEANPLTTYQYQTQMWQRPHSWG*RRTCNM Trigger: CATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGG...CCGTTGCCACATCTGGGTTTGATATTGATATGTTGTTAATGGGTTTGCCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | TGCACATTGGCTTATACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCCCAGTAGCTCCAGTCTaGCCTTGGCAGCAAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTLAYTKFILRLRKQQFPPVAPV*PWQQSP Trigger: AGGACTTTGCTGCCAAGGCCAGACTGGAGCTACTGG...GGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTATAAGCCAATGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | GTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAACTTGTCCAGCAGGGAGCTaGTTTGAGAAGAACGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSEVNWIKRPFPFSLTTCPAGS*FEKNGS Trigger: GCTGCCGTTCTTCTCAAACCAGCTCCCTGCTGGACA...AGTTGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTATCCAGCAGGAAGGCCTaGGAAGGTCTGCAGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLSEVNWIKRPFPFSLSSRKA*EGLQVM Trigger: CATTACCTGCAGACCTTCCCAGGCCTTCCTGCTGGA...TAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTATCTGTGCCTTTTGGCTaGCTCTGCGGTGTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLSEVNWIKRPFPFSLSVPFG*LCGVFW Trigger: CCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGA...TAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | AGGATCATTGAGATCCTACACTTCATCAGTTGTAGTCTCTTAACAATGAACACAGCGCAGAAGGACAGTTaGACTTGGCTCCCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RIIEILHFISCSLLTMNTAQKDS*TWLPLM Trigger: CATCAAGGGGAGCCAAGTTCAACTGTCCTTCTGCGC...TGTGTTCATTGTTAAGAGACTACAACTGATGAAGTGTAGGATCTCAATGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTCAACAGGACTTAATTTTACAAATGCTAGCTCTTCCTTTTATACGAGCCGCGCTGAGCTGCTATaGGGACTGCTAGAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKSTGLNFTNASSSFYTSRAELL*GLLECF Trigger: GAAGCACTCTAGCAGTCCTCATAGCAGCTCAGCGCG...GCTCGTATAAAAGGAAGAGCTAGCATTTGTAAAATTAAGTCCTGTTGACTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAATCGCGCTCTGCGCCTaGTCCCCATTCAATAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTIALCA*SPFNKV Trigger: TACCTTATTGAATGGGGAGCAGGCGCAGAGCGCGAT...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTCAACAGGACTTAATTTTACAAATGCTAGCTCTTCCTTTTATACGAGCCAGGTCCGTTTTCAGTaGAAGCGGTGGCCCTATCGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSTGLNFTNASSSFYTSQVRFQ*KRWPYR Trigger: GCGATAGGGCCACCGCTTCCACTGAAAACGGACCTG...GCTCGTATAAAAGGAAGAGCTAGCATTTGTAAAATTAAGTCCTGTTGACTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACACAAACTCTTCTAAGGTaGAGGAGATGGGCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTQTLLR*RRWAGW Trigger: CCAACCTGCCCATCTCCTTCACCTTAGAAGAGTTTG...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACACAAAGGCACTTAGAATaGATGAGCTCCGAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTQRHLE*MSSEAK Trigger: CTTGGCCTCGGAGCTCATCCATTCTAAGTGCCTTTG...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | TGCACATTGGCTTATACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCTCGCATCCAGAATGTTaGTCGCAATTCCAGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CTLAYTKFILRLRKQQFPSHPEC*SQFQSS Trigger: CGAAGACTGGAATTGCGAGCAACATTCTGGATGCGA...GGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTATAAGCCAATGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGTTTTTCAAAATGACAGACTCCCATCCTACCAAGGAAACTCGTGGCAATTATTTACTTTTGTGTaGTTCGCCATGGTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKVFQNDRLPSYQGNSWQLFTFV*FAMVSQ Trigger: CTGGGACACCATGGCGAAGCACACAAAAGTAAATAA...TTGCCACGAGTTTCCTTGGTAGGATGGGAGTCTGTCATTTTGAAAAACTTTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACATGGATAGGCACACACTaGGTAGCACACTTGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTWIGTH*VAHLPN Trigger: ATTTGGCAAGTGTGCTACCCAGTGTGTGCCTATCCA...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| 3UTR CAA 72 bp | GTTGGTTGTAATGACCTTGTACTAACATCACTTGATTaGCATTTCTGTCTTGTAATAACGGGCACAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGCNDLVLTSLD*HFCLVITGTGW Trigger: CCAGCCTGTGCCCGTTATTACAAGACAGAAATGCAAATCAAGTGATGTTAGTACAAGGTCATTACAACCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR TCA 90 bp | TGCACATTGGCTTATACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCAATATGGATTTTTACTaGGCCGGATCTCTTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTLAYTKFILRLRKQQFPNMDFY*AGSLLV Trigger: CACCAAAAGAGATCCGGCTCAGTAAAAATCCATATT...GGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTATAAGCCAATGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGATGTGGCAACGGGGCTCTTTACATTTTAAATGACCAAGATTCAAACAATCGCTGTAGTCACTaGGGAGTTTATCTATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPRCGNGALYILNDQDSNNRCSH*GVYLYK Trigger: TTTGTATAGATAAACTCCCCAGTGACTACAGCGATT...GTTTGAATCTTGGTCATTTAAAATGTAAAGAGCCCCGTTGCCACATCTGGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTCAACAGGACTTAATTTTACAAATGCTAGCTCTTCCTTTTATACGAGCTCATCCTGTGCAAGCTaGCAAAACACAGGTTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: FKSTGLNFTNASSSFYTSSSCAS*QNTGLW Trigger: CCATAAACCTGTGTTTTGCCAGCTTGCACAGGATGA...GCTCGTATAAAAGGAAGAGCTAGCATTTGTAAAATTAAGTCCTGTTGACTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CCA 90 bp | CTTAATTATCCTATGAGAAAGAGAGGAATACAGGTAAGCCATCTCCAAGCCTCGGAAGAACTTGTAACATaGCAGGGTTGTTTAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNYPMRKRGIQVSHLQASEELVT*QGCLNF Trigger: AAAGTTTAAACAACCCTGCCATGTTACAAGTTCTTC...CGAGGCTTGGAGATGGCTTACCTGTATTCCTCTCTTTCTCATAGGATAATTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| 3UTR CAA 72 bp | CAGTTATTGCTTCAGACTTTATATATGATGTCAAAATaGTTCCCAGGCCCGAAACAAGGACTATTGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLQTLYMMSK*FPGPKQGLLEC Trigger: GCATTCCAATAGTCCTTGTTTCGGGCCTGGGAACAATTTTGACATCATATATAAAGTCTGAAGCAATAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CCA 90 bp | CACTTAATACCAAGATCTTCGGCAAAGGGTGAAGTCAAAAGTCAGACAAATAAAAATCGCTGTAGTCACTaGGGAGTTTATCTATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLIPRSSAKGEVKSQTNKNRCSH*GVYLYK Trigger: TTTGTATAGATAAACTCCCCAGTGACTACAGCGATT...TTTATTTGTCTGACTTTTGACTTCACCCTTTGCCGAAGATCTTGGTATTAAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS CCA 90 bp | TTGCTCAGCTCCCGTCGCATCCGCTGCAGCCGTGCAGCCACCTCCTaGGGGTGCAGCGCAGCCACCTCCCCCGGGCGCAGCGCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSRRIRCSRAATS*GCSAATSPGRSAGS Trigger: GGAGCCCGCGCTGCGCCCGGGGGAGGTGGCTGCGCTGCACCCCCAGGAGGTGGCTGCACGGCTGCAGCGGATGCGACGGGAGCTGAGCAA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 90 bp | TTCACTAGGATTTTCCGCCGGTTGCTCAGCTCCCGTCGCATCCGCTaGAGCCGTGCAGCCACCTCCTGGGGGTGCAGCGCAGCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTRIFRRLLSSRRIR*SRAATSWGCSAATS Trigger: GGAGGTGGCTGCGCTGCACCCCCAGGAGGTGGCTGCACGGCTGCAGCGGATGCGACGGGAGCTGAGCAACCGGCGGAAAATCCTAGTGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 90 bp | AGGCAACCTCTGTGCCTTTTGGCTGGCTCTGCGGTGTCTTCTGGTTaGCCGTCAGCGGGCCTCCAGCAGGAAGGCCTGGGAAGGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQPLCLLAGSAVSSG*PSAGLQQEGLGRSA Trigger: TGCAGACCTTCCCAGGCCTTCCTGCTGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGAGGTTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS CCA 90 bp | TTAGAGGCAACCTCTGTGCCTTTTGGCTGGCTCTGCGGTGTCTTCTaGTTGCCCGTCAGCGGGCCTCCAGCAGGAAGGCCTGGGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEATSVPFGWLCGVF*LPVSGPPAGRPGKV Trigger: GACCTTCCCAGGCCTTCCTGCTGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGAGGTTGCCTCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | CTCAGAACTGCCCCACGCTGTCCACGGCCTCCCTCAGGAAGGGCTGTGTGCACTAGCTCCAGTCTGGCCTaGGCAGCAAAGTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTAPRCPRPPSGRAVCTSSSLA*AAKSFF Trigger: GAAGAAGGACTTTGCTGCCAAGGCCAGACTGGAGCT...AGTGCACACAGCCCTTCCTGAGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 90 bp | AGATTAACATCCATCCACTGTGCGAAGAGCGCCGAGGCTCCCATCTaGCTGCCCAGTAGCTCCAGTCTGGCCTTGGCAGCAAAGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLTSIHCAKSAEAPI*LPSSSSLALAAKSF Trigger: GAAGGACTTTGCTGCCAAGGCCAGACTGGAGCTACTGGGCAGGCAGATGGGAGCCTCGGCGCTCTTCGCACAGTGGATGGATGTTAATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CCA 90 bp | TCAGCAGGTGAGATAAGCTGGGCGCGACTCCGAGAACTGGCTTCATaGCTCGTCCGCATAGCTGGGGCTGCAGAAGAACTTGTAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGEISWARLRELAS*LVRIAGAAEELVTW Trigger: CCATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGCCATGAAGCCAGTTCTCGGAGTCGCGCCCAGCTTATCTCACCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCAAGCCTCACTGTGTTCCCAACATCATCTTGGGGACATTGAAACTGCAACGCCCCGGGCCGGCTaGTCCAGCAGGGAGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NEQASLCSQHHLGDIETATPRAG*SSRELV Trigger: AACCAGCTCCCTGCTGGACAAGCCGGCCCGGGGCGT...TGCAGTTTCAATGTCCCCAAGATGATGTTGGGAACACAGTGAGGCTTGCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS GCA 90 bp | GCAGAAGGACAGTTGAACTTGGCTCCCCTTGATGGTGATGCCATCTaGCACCTGCTGAACCTCTTCGGCATGCTCCGCAGTGCTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: AEGQLNLAPLDGDAI*HLLNLFGMLRSAIF Trigger: GAATATAGCACTGCGGAGCATGCCGAAGAGGTTCAGCAGGTGGCAGATGGCATCACCATCAAGGGGAGCCAAGTTCAACTGTCCTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 90 bp | GTGCATGCTGGGACTCACTTCCCTGAGAGATCGCATCCAGAATGTTaGTCGCAATTCCAGTCTTCGGAGGCATGCCTTTACCTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHAGTHFPERSHPEC*SQFQSSEACLYLQW Trigger: CCACTGCAGGTAAAGGCATGCCTCCGAAGACTGGAATTGCGAGCAACATTCTGGATGCGATCTCTCAGGGAAGTGAGTCCCAGCATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS GCA 90 bp | AGGAGGATGCCTGGGCATAATCCTCGATGGATGGAGAATAGGCGATaGACTTCTCCAGTGCATGCTGGGACTCACTTCCCTGAGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RRMPGHNPRWMENRR*TSPVHAGTHFPERS Trigger: CGATCTCTCAGGGAAGTGAGTCCCAGCATGCACTGGAGAAGTGCATCGCCTATTCTCCATCCATCGAGGATTATGCCCAGGCATCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS CCA 90 bp | CTGGGCGCGACTCCGAGAACTGGCTTCATGGCTCGTCCGCATAGCTaGGGCTGCAGAAGAACTTGTAACATGGCAGGGTTGTTTAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LGATPRTGFMARPHS*GCRRTCNMAGLFKL Trigger: AAGTTTAAACAACCCTGCCATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGCCATGAAGCCAGTTCTCGGAGTCGCGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
||
| CDS-3UTR CAA 90 bp | GACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCAAGGATTTTCCGCCGGTaGCTCAGCTCCCGTCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: DQWCFLLLGGYLADLPAARIFRR*LSSRRI Trigger: GATGCGACGGGAGCTGAGCAACCGGCGGAAAATCCT...TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | TCTGGCGCTGCTGTGAACCTGCATAAAATATTAAAGCCCACCCAGCAGGGACTGAAGGAGATGGGCAGGTaGGTGATGCACAAGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGAAVNLHKILKPTQQGLKEMGR*VMHKRA Trigger: CGCTCTCTTGTGCATCACCAACCTGCCCATCTCCTT...CAGTCCCTGCTGGGTGGGCTTTAATATTTTATGCAGGTTCACAGCAGCGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| CDS-3UTR CAA 90 bp | GACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCACAGCAGGGAGCTGGTTaGAGAAGAACGGCAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DQWCFLLLGGYLADLPAAQQGAG*RRTAAC Trigger: GCATGCTGCCGTTCTTCTCAAACCAGCTCCCTGCTG...TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 90 bp | AGATCGCATCCAGAATGTTGCTCGCAATTCCAGTCTTCGGAGGCATaGCTTTACCTGCAGTGGATAGGCACACACTGGGTAGCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSHPECCSQFQSSEA*LYLQWIGTHWVAHL Trigger: CAAGTGTGCTACCCAGTGTGTGCCTATCCACTGCAGGTAAAGGCATGCCTCCGAAGACTGGAATTGCGAGCAACATTCTGGATGCGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS TCA 90 bp | TTACTGAGCCGGATCTCTTTTGGTGGTTCTCCCAAGAGTGAAGTCTaGTTCTTAGAGGCAACCTCTGTGCCTTTTGGCTGGCTCTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSRISFGGSPKSEV*FLEATSVPFGWLCG Trigger: ACCGCAGAGCCAGCCAAAAGGCACAGAGGTTGCCTCTAAGAATCAGACTTCACTCTTGGGAGAACCACCAAAAGAGATCCGGCTCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 90 bp | GGCATAATCCTCGATGGATGGAGAATAGGCGATGCACTTCTCCAGTaGATGCTGGGACTCACTTCCCTGAGAGATCGCATCCAGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GIILDGWRIGDALLQ*MLGLTSLRDRIQNV Trigger: AACATTCTGGATGCGATCTCTCAGGGAAGTGAGTCCCAGCATGCACTGGAGAAGTGCATCGCCTATTCTCCATCCATCGAGGATTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 90 bp | AGAGATGAGATAGGAGGAGCCTCGCTTCTCATTCCTCAAGGAGGATaGCTGGGCATAATCCTCGATGGATGGAGAATAGGCGATGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RDEIGGASLLIPQGG*LGIILDGWRIGDAL Trigger: AAGTGCATCGCCTATTCTCCATCCATCGAGGATTATGCCCAGGCATCCTCCTTGAGGAATGAGAAGCGAGGCTCCTCCTATCTCATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | GAGAAAGAGAGGAATACAGGTAAGCCATCTCCAAGCCTCGATGCCGACCACGTAGAAGGACAGTTGAACTaGGCTCCCCTTGATGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EKERNTGKPSPSLDADHVEGQLN*APLDGD Trigger: ATCACCATCAAGGGGAGCCAAGTTCAACTGTCCTTC...TACGTGGTCGGCATCGAGGCTTGGAGATGGCTTACCTGTATTCCTCTCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGAAATTGAAATGCAGACAAGAGTCATGTGCCGTGAGCCCAATGGGCAGGGCGCAGAAGGACAGTaGAACTTGGCTCCCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSEIEMQTRVMCREPNGQGAEGQ*NLAPLD Trigger: ATCAAGGGGAGCCAAGTTCAACTGTCCTTCTGCGCC...CTGCCCATTGGGCTCACGGCACATGACTCTTGTCTGCATTTCAATTTCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| CDS-3UTR CAA 90 bp | ACGGCTTACTACAGAGAGGTGGTTTGCCCCAGCCTGGGTTTAAATCCTGAGACCAGCAAGCCAGGCTTATaGTTAGTGTGGGCATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAYYREVVCPSLGLNPETSKPGL*LVWALS Trigger: TGACAATGCCCACACTAACAATAAGCCTGGCTTGCT...GGTCTCAGGATTTAAACCCAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| CDS GCA 90 bp | GCGACTCCGAGAACTGGCTTCATGGCTCGTCCGCATAGCTGGGGCTaGAGAAGAACTTGTAACATGGCAGGGTTGTTTAAACTTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: ATPRTGFMARPHSWG*RRTCNMAGLFKLFI Trigger: TATGAAAAGTTTAAACAACCCTGCCATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGCCATGAAGCCAGTTCTCGGAGTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTTTTTCAAAATGACAGACTCCCATCCTACCAAGGAAACTCGTGGCAAAGGATTTTCCGCCGGTaGCTCAGCTCCCGTCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VKVFQNDRLPSYQGNSWQRIFRR*LSSRRI Trigger: GATGCGACGGGAGCTGAGCAACCGGCGGAAAATCCT...TTGCCACGAGTTTCCTTGGTAGGATGGGAGTCTGTCATTTTGAAAAACTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
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| CDS CCA 90 bp | TGTTGCTCGCAATTCCAGTCTTCGGAGGCATGCCTTTACCTGCAGTaGATAGGCACACACTGGGTAGCACACTTGCCAAATTCAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: CCSQFQSSEACLYLQ*IGTHWVAHLPNSNM Trigger: CATATTTGAATTTGGCAAGTGTGCTACCCAGTGTGTGCCTATCCACTGCAGGTAAAGGCATGCCTCCGAAGACTGGAATTGCGAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | AAGATAAAAAGAATAGGGAGACAGACTAAGGGCAAGAGAGTAAACGCCCCTGCCGAAGGACAGTTGAACTaGGCTCCCCTTGATGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KIKRIGRQTKGKRVNAPAEGQLN*APLDGD Trigger: ATCACCATCAAGGGGAGCCAAGTTCAACTGTCCTTC...GGCAGGGGCGTTTACTCTCTTGCCCTTAGTCTGTCTCCCTATTCTTTTTATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | GACCAGTGGTGTTTCTTATTGCTAGGTGGGTATTTGGCTGATCTGCCTGCTGCAATCAGGTTAGATGTTTaGTGTGCTTCGCCATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DQWCFLLLGGYLADLPAAIRLDV*CASPWC Trigger: ACACCATGGCGAAGCACACAAAACATCTAACCTGAT...TGCAGCAGGCAGATCAGCCAAATACCCACCTAGCAATAAGAAACACCACTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | TGTTGTCACCACTGGGTGGTACTGCCACCCTTGCAGTTTGAGGAAAGACTACAGCACTGGGTAGCACACTaGCCAAATTCAAATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CCHHWVVLPPLQFEERLQHWVAH*PNSNMD Trigger: ATCCATATTTGAATTTGGCAAGTGTGCTACCCAGTG...CTGTAGTCTTTCCTCAAACTGCAAGGGTGGCAGTACCACCCAGTGGTGACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS TCA 90 bp | AACTTCATCAACTGTTGCTGTATCAAGGGCAAGGGAGACAGGTTCTaGAGGATTAAGGACGATGTATTACCCACAGCTGAGCTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NFINCCCIKGKGDRF*RIKDDVLPTAELCC Trigger: ACAGCAGAGCTCAGCTGTGGGTAATACATCGTCCTTAATCCTTCAGAACCTGTCTCCCTTGCCCTTGATACAGCAACAGTTGATGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCAAGCCTCACTGTGTTCCCAACATCATCTTGGGGACATTGAAACTGCAAGCAAGCCAGGCTTATaGTTAGTGTGGGCATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NEQASLCSQHHLGDIETASKPGL*LVWALS Trigger: TGACAATGCCCACACTAACAATAAGCCTGGCTTGCT...TGCAGTTTCAATGTCCCCAAGATGATGTTGGGAACACAGTGAGGCTTGCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | AAGATAAAAAGAATAGGGAGACAGACTAAGGGCAAGAGAGTAAACGCCCCTGCCATCGCATCCAGAATGTaGCTCGCAATTCCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KIKRIGRQTKGKRVNAPAIASRM*LAIPVF Trigger: GAAGACTGGAATTGCGAGCAACATTCTGGATGCGAT...GGCAGGGGCGTTTACTCTCTTGCCCTTAGTCTGTCTCCCTATTCTTTTTATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | TGCACATTGGCTTATACGAAATTCATTCTAAGGCTAAGGAAACAACAGTTTCCCAAGGAGATGGGCAGGTaGGTGATGCACAAGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CTLAYTKFILRLRKQQFPKEMGR*VMHKRA Trigger: CGCTCTCTTGTGCATCACCAACCTGCCCATCTCCTT...GGGAAACTGTTGTTTCCTTAGCCTTAGAATGAATTTCGTATAAGCCAATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | AGTGTTCTTTCAGAAGTGAATTGGATTAAGCGGCCATTTCCTTTCAGCTTAACAGGCGCAGAAGGACAGTaGAACTTGGCTCCCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVLSEVNWIKRPFPFSLTGAEGQ*NLAPLD Trigger: ATCAAGGGGAGCCAAGTTCAACTGTCCTTCTGCGCC...TGTTAAGCTGAAAGGAAATGGCCGCTTAATCCAATTCACTTCTGAAAGAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | CACTTAATACCAAGATCTTCGGCAAAGGGTGAAGTCAAAAGTCAGACAAATAAACAACCTCTGTGCCTTTaGGCTGGCTCTGCGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLIPRSSAKGEVKSQTNKQPLCL*AGSAVS Trigger: AGACACCGCAGAGCCAGCCAAAAGGCACAGAGGTTG...TTTATTTGTCTGACTTTTGACTTCACCCTTTGCCGAAGATCTTGGTATTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | AATGATACTCCGGAAGTGAAGCATCTGAAGTCACATCACTTTCACTCTGCCACTAAACTTCATCAACTGTaGCTGTATCAAGGGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NDTPEVKHLKSHHFHSATKLHQL*LYQGQG Trigger: CCCTTGCCCTTGATACAGCAACAGTTGATGAAGTTT...AGTGGCAGAGTGAAAGTGATGTGACTTCAGATGCTTCACTTCCGGAGTATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS TCA 90 bp | ACACACTGGGTAGCACACTTGCCAAATTCAAATATGGATTTTTACTaGGCCGGATCTCTTTTGGTGGTTCTCCCAAGAGTGAAGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: THWVAHLPNSNMDFY*AGSLLVVLPRVKSD Trigger: ATCAGACTTCACTCTTGGGAGAACCACCAAAAGAGATCCGGCTCAGTAAAAATCCATATTTGAATTTGGCAAGTGTGCTACCCAGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS-3UTR CAA 90 bp | AAGATAAAAAGAATAGGGAGACAGACTAAGGGCAAGAGAGTAAACGCCCCTGCCTTGTTAGTGTGGGCATaGTCAAACTTCATCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KIKRIGRQTKGKRVNAPALLVWA*SNFINC Trigger: ACAGTTGATGAAGTTTGACAATGCCCACACTAACAA...GGCAGGGGCGTTTACTCTCTTGCCCTTAGTCTGTCTCCCTATTCTTTTTATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS-3UTR CAA 90 bp | AAACCCAGATGTGGCAACGGGGCTCTTTACATTTTAAATGACCAAGATTCAAACAAACTTCATCAACTGTaGCTGTATCAAGGGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPRCGNGALYILNDQDSNKLHQL*LYQGQG Trigger: CCCTTGCCCTTGATACAGCAACAGTTGATGAAGTTT...GTTTGAATCTTGGTCATTTAAAATGTAAAGAGCCCCGTTGCCACATCTGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGCAAACCCATTAACAACATATCAATATCAAACCCAGATGTGGCAACGGTTGTTAGTGTGGGCATaGTCAAACTTCATCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: MEANPLTTYQYQTQMWQRLLVWA*SNFINC Trigger: ACAGTTGATGAAGTTTGACAATGCCCACACTAACAA...CCGTTGCCACATCTGGGTTTGATATTGATATGTTGTTAATGGGTTTGCCTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106955.2 |
||
| CDS GCA 72 bp | CCGGTTGCTCAGCTCCCGTCGCATCCGCTGCAGCCGTaGAGCCACCTCCTGGGGGTGCAGCGCAGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVAQLPSHPLQP*SHLLGVQRSHL Trigger: GAGGTGGCTGCGCTGCACCCCCAGGAGGTGGCTGCACGGCTGCAGCGGATGCGACGGGAGCTGAGCAACCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
||
| CDS GCA 72 bp | ATTTTCCGCCGGTTGCTCAGCTCCCGTCGCATCCGCTaGAGCCGTGCAGCCACCTCCTGGGGGTGCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: IFRRLLSSRRIR*SRAATSWGCSA Trigger: TGCGCTGCACCCCCAGGAGGTGGCTGCACGGCTGCAGCGGATGCGACGGGAGCTGAGCAACCGGCGGAAAAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
||
| CDS GCA 72 bp | CTGTGCCTTTTGGCTGGCTCTGCGGTGTCTTCTGGTTaGCCGTCAGCGGGCCTCCAGCAGGAAGGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LCLLAGSAVSSG*PSAGLQQEGLG Trigger: TCCCAGGCCTTCCTGCTGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS CAA 72 bp | TCTGTGCCTTTTGGCTGGCTCTGCGGTGTCTTCTGGTaGCCCGTCAGCGGGCCTCCAGCAGGAAGGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVPFGWLCGVFW*PVSGPPAGRPG Trigger: CCCAGGCCTTCCTGCTGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS CAA 90 bp | GAGGCAACCTCTGTGCCTTTTGGCTGGCTCTGCGGTGTCTTCTGGTaGCCCGTCAGCGGGCCTCCAGCAGGAAGGCCTGGGAAGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EATSVPFGWLCGVFW*PVSGPPAGRPGKVC Trigger: GCAGACCTTCCCAGGCCTTCCTGCTGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGAGGTTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS CCA 72 bp | ACCTCTGTGCCTTTTGGCTGGCTCTGCGGTGTCTTCTaGTTGCCCGTCAGCGGGCCTCCAGCAGGAAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TSVPFGWLCGVF*LPVSGPPAGRP Trigger: AGGCCTTCCTGCTGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
||
| CDS GCA 72 bp | TCCACTGTGCGAAGAGCGCCGAGGCTCCCATCTGCCTaGCCAGTAGCTCCAGTCTGGCCTTGGCAGCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: STVRRAPRLPSA*PVAPVWPWQQS Trigger: ACTTTGCTGCCAAGGCCAGACTGGAGCTACTGGGCAGGCAGATGGGAGCCTCGGCGCTCTTCGCACAGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
||
| CDS CCA 72 bp | GCGGTGGCCCTATCGCCAGAGCAGGCTGCAGTACCATaGCAGGAGGCTCTCCCAGCAAGCCAGGCTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: AVALSPEQAAVP*QEALPASQAYC Trigger: ACAATAAGCCTGGCTTGCTGGGAGAGCCTCCTGCCATGGTACTGCAGCCTGCTCTGGCGATAGGGCCACCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 72 bp | GTCCAGCAGGGAGCTGGTTTGAGAAGAACGGCAGCATaGCCAGCCCGGCTGCCAATGTCGTCTGAGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VQQGAGLRRTAA*PARLPMSSEVE Trigger: TTCCACCTCAGACGACATTGGCAGCCGGGCTGGGCATGCTGCCGTTCTTCTCAAACCAGCTCCCTGCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS TCA 72 bp | TGTAAGATGGCGGAGGGGAGTGACGGACTCAGCAGGTaGGATAAGCTGGGCGCGACTCCGAGAACTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: CKMAEGSDGLSR*DKLGATPRTGF Trigger: GAAGCCAGTTCTCGGAGTCGCGCCCAGCTTATCTCACCTGCTGAGTCCGTCACTCCCCTCCGCCATCTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 72 bp | TTCTTAGAGGCAACCTCTGTGCCTTTTGGCTGGCTCTaGGGTGTCTTCTGGTTGCCCGTCAGCGGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLEATSVPFGWL*GVFWLPVSGPP Trigger: TGGAGGCCCGCTGACGGGCAACCAGAAGACACCGCAGAGCCAGCCAAAAGGCACAGAGGTTGCCTCTAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 72 bp | CTGCCACCTGCTGAACCTCTTCGGCATGCTCCGCAGTaGTATATTCAACCACCGCAAAGCCACCACCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LPPAEPLRHAPQ*YIQPPQSHHRD Trigger: GTCACGGTGGTGGCTTTGCGGTGGTTGAATATAGCACTGCGGAGCATGCCGAAGAGGTTCAGCAGGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CCA 72 bp | GAGATAAGCTGGGCGCGACTCCGAGAACTGGCTTCATaGCTCGTCCGCATAGCTGGGGCTGCAGAAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: EISWARLRELAS*LVRIAGAAEEL Trigger: AAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGCCATGAAGCCAGTTCTCGGAGTCGCGCCCAGCTTATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS TCA 72 bp | CCTTTTGATTACTGTGCATCGCGCGCTGAGCTGCTATaGGGACTGCTAGAGTGCTTCGCCCTGGTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PFDYCASRAELL*GLLECFALVLL Trigger: CAGGAGCACCAGGGCGAAGCACTCTAGCAGTCCTCATAGCAGCTCAGCGCGCGATGCACAGTAATCAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 72 bp | GGCAGGTTGGTGATGCACAAGAGAGCGTCTGTGGGCTaGAGCTGCACTGTCAACTCTCTGCCTCGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GRLVMHKRASVG*SCTVNSLPRKE Trigger: TTCTTTCCGAGGCAGAGAGTTGACAGTGCAGCTGCAGCCCACAGACGCTCTCTTGTGCATCACCAACCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CCA 72 bp | ACTCCGAGAACTGGCTTCATGGCTCGTCCGCATAGCTaGGGCTGCAGAAGAACTTGTAACATGGCAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TPRTGFMARPHS*GCRRTCNMAGL Trigger: CAACCCTGCCATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGCCATGAAGCCAGTTCTCGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 72 bp | CTCGATGGATGGAGAATAGGCGATGCACTTCTCCAGTaGATGCTGGGACTCACTTCCCTGAGAGATCGCATC | + |
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Preference number: 6 (lower is better) Translates to: LDGWRIGDALLQ*MLGLTSLRDRI Trigger: GATGCGATCTCTCAGGGAAGTGAGTCCCAGCATGCACTGGAGAAGTGCATCGCCTATTCTCCATCCATCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS CCA 72 bp | GGTGGAATCAGGTTAGATGTTTTGTGTGCTTCGCCATaGTGTCCCAGGTCCGTTTTCAGTGGAAGCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GGIRLDVLCASP*CPRSVFSGSGG Trigger: GCCACCGCTTCCACTGAAAACGGACCTGGGACACCATGGCGAAGCACACAAAACATCTAACCTGATTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 72 bp | GAGCGTCTGTGGGCTGCAGCTGCACTGTCAACTCTCTaGCTCGGAAAGAAAACTGATGAAACCTCTGAATCG | + |
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Preference number: 6 (lower is better) Translates to: ERLWAAAALSTL*LGKKTDETSES Trigger: CGATTCAGAGGTTTCATCAGTTTTCTTTCCGAGGCAGAGAGTTGACAGTGCAGCTGCAGCCCACAGACGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS GCA 72 bp | CCAGAATGTTGCTCGCAATTCCAGTCTTCGGAGGCATaGCTTTACCTGCAGTGGATAGGCACACACTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: PECCSQFQSSEA*LYLQWIGTHWV Trigger: TACCCAGTGTGTGCCTATCCACTGCAGGTAAAGGCATGCCTCCGAAGACTGGAATTGCGAGCAACATTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 72 bp | GGGACTCACTTCCCTGAGAGATCGCATCCAGAATGTTaGTCGCAATTCCAGTCTTCGGAGGCATGCCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: GTHFPERSHPEC*SQFQSSEACLY Trigger: GTAAAGGCATGCCTCCGAAGACTGGAATTGCGAGCAACATTCTGGATGCGATCTCTCAGGGAAGTGAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS CAA 90 bp | GCAGGAGGCTCTCCCAGCAAGCCAGGCTTATTGTTAGTGTGGGCATaGTCAAACTTCATCAACTGTTGCTGTATCAAGGGCAAGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AGGSPSKPGLLLVWA*SNFINCCCIKGKGD Trigger: GTCTCCCTTGCCCTTGATACAGCAACAGTTGATGAAGTTTGACAATGCCCACACTAACAATAAGCCTGGCTTGCTGGGAGAGCCTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS TCA 72 bp | ATGTATTACCCACAGCTGAGCTCTGCTGTGCTTTACTaGAGTGTAAGATGGCGGAGGGGAGTGACGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: MYYPQLSSAVLY*SVRWRRGVTDS Trigger: TGAGTCCGTCACTCCCCTCCGCCATCTTACACTTCAGTAAAGCACAGCAGAGCTCAGCTGTGGGTAATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS TCA 72 bp | ATGCACTTCTCCAGTGCATGCTGGGACTCACTTCCCTaGGAGATCGCATCCAGAATGTTGCTCGCAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: MHFSSACWDSLP*EIASRMLLAIP Trigger: TGGAATTGCGAGCAACATTCTGGATGCGATCTCTCAGGGAAGTGAGTCCCAGCATGCACTGGAGAAGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS CCA 72 bp | CAATTCCAGTCTTCGGAGGCATGCCTTTACCTGCAGTaGATAGGCACACACTGGGTAGCACACTTGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: QFQSSEACLYLQ*IGTHWVAHLPN Trigger: ATTTGGCAAGTGTGCTACCCAGTGTGTGCCTATCCACTGCAGGTAAAGGCATGCCTCCGAAGACTGGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS TCA 72 bp | CGGATCTCTTTTGGTGGTTCTCCCAAGAGTGAAGTCTaGTTCTTAGAGGCAACCTCTGTGCCTTTTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RISFGGSPKSEV*FLEATSVPFGW Trigger: CCAGCCAAAAGGCACAGAGGTTGCCTCTAAGAATCAGACTTCACTCTTGGGAGAACCACCAAAAGAGATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS GCA 72 bp | AGAACTGGCTTCATGGCTCGTCCGCATAGCTGGGGCTaGAGAAGAACTTGTAACATGGCAGGGTTGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: RTGFMARPHSWG*RRTCNMAGLFK Trigger: TTTAAACAACCCTGCCATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGGACGAGCCATGAAGCCAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CAA 72 bp | ACCATGGCAGGAGGCTCTCCCAGCAAGCCAGGCTTATaGTTAGTGTGGGCATTGTCAAACTTCATCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: TMAGGSPSKPGL*LVWALSNFINC Trigger: ACAGTTGATGAAGTTTGACAATGCCCACACTAACAATAAGCCTGGCTTGCTGGGAGAGCCTCCTGCCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS TCA 72 bp | ACTGAGCCGGATCTCTTTTGGTGGTTCTCCCAAGAGTaGAGTCTGATTCTTAGAGGCAACCTCTGTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TEPDLFWWFSQE*SLILRGNLCAF Trigger: AAAGGCACAGAGGTTGCCTCTAAGAATCAGACTTCACTCTTGGGAGAACCACCAAAAGAGATCCGGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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| CDS CAA 90 bp | CGTCCGCATAGCTGGGGCTGCAGAAGAACTTGTAACATGGCAGGGTaGTTTAAACTTTTCATAATCTGTACCGGATTGGGTTCTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RPHSWGCRRTCNMAG*FKLFIICTGLGSGS Trigger: ACTGCCAGAACCCAATCCGGTACAGATTATGAAAAGTTTAAACAACCCTGCCATGTTACAAGTTCTTCTGCAGCCCCAGCTATGCGGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS TCA 72 bp | AACTGTTGCTGTATCAAGGGCAAGGGAGACAGGTTCTaGAGGATTAAGGACGATGTATTACCCACAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: NCCCIKGKGDRF*RIKDDVLPTAE Trigger: CTCAGCTGTGGGTAATACATCGTCCTTAATCCTTCAGAACCTGTCTCCCTTGCCCTTGATACAGCAACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CAA 72 bp | TCTCCCAGCAAGCCAGGCTTATTGTTAGTGTGGGCATaGTCAAACTTCATCAACTGTTGCTGTATCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SPSKPGLLLVWA*SNFINCCCIKG Trigger: GCCCTTGATACAGCAACAGTTGATGAAGTTTGACAATGCCCACACTAACAATAAGCCTGGCTTGCTGGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CCA 72 bp | TCACTGGGGAGTTTATCTATACAAAGGCACTTAGAATaGATGAGCTCCGAGGCCAAGAGATTAACATCCATC | + |
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Preference number: 6 (lower is better) Translates to: SLGSLSIQRHLE*MSSEAKRLTSI Trigger: GATGGATGTTAATCTCTTGGCCTCGGAGCTCATCCATTCTAAGTGCCTTTGTATAGATAAACTCCCCAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CAA 72 bp | AGCTGGGGCTGCAGAAGAACTTGTAACATGGCAGGGTaGTTTAAACTTTTCATAATCTGTACCGGATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SWGCRRTCNMAG*FKLFIICTGLG Trigger: ACCCAATCCGGTACAGATTATGAAAAGTTTAAACAACCCTGCCATGTTACAAGTTCTTCTGCAGCCCCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS CAA 72 bp | ATTGTTAGTGTGGGCATTGTCAAACTTCATCAACTGTaGCTGTATCAAGGGCAAGGGAGACAGGTTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: IVSVGIVKLHQL*LYQGQGRQVLK Trigger: CTTCAGAACCTGTCTCCCTTGCCCTTGATACAGCAACAGTTGATGAAGTTTGACAATGCCCACACTAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038463.15 ENSMUST00000106955.2 |
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| CDS TCA 72 bp | GTAGCACACTTGCCAAATTCAAATATGGATTTTTACTaGGCCGGATCTCTTTTGGTGGTTCTCCCAAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VAHLPNSNMDFY*AGSLLVVLPRV Trigger: CACTCTTGGGAGAACCACCAAAAGAGATCCGGCTCAGTAAAAATCCATATTTGAATTTGGCAAGTGTGCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038463.15 |
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