Pregenerated sensors for RAVER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010205Ensembl transcript IDs: ENSMUST00000115487.3
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGGTCCTGAGCGGAGCTTTTGGAGCTCCGCATCTGTGAGGCTCTaGCCCAGCAGGACCTGTGGCCCAACTTTAAGGCATCAGAAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: FGPERSFWSSASVRL*PSRTCGPTLRHQKA Trigger: TGCCTTCTGATGCCTTAAAGTTGGGCCACAGGTCCTGCTGGGTCAGAGCCTCACAGATGCGGAGCTCCAAAAGCTCCGCTCAGGACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 90 bp | AAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAAGGATaGACCCTAGGCCAGAGCTCTTTGGTCCTGAGCGGAGCTTTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: KALAFCPQGRHLEKG*TLGQSSLVLSGAFG Trigger: TCCAAAAGCTCCGCTCAGGACCAAAGAGCTCTGGCCTAGGGTTCATCCTTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 90 bp | GCCTGGGTACAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTaGAGCCAGCAGAAAATACTGGTCTCTGCATCCAGGCTTTGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: AWVQWSPFTDSRGDC*SQQKILVSASRLWA Trigger: TGCCCAAAGCCTGGATGCAGAGACCAGTATTTTCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 90 bp | ATAGGCAGGCAGGGGCATGAGACAGCTATACCTGCAGCAGATGACTaGGAAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: IGRQGHETAIPAADD*EENRVKLLEPAHVE Trigger: TTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTGCTGCAGGTATAGCTGTCTCATGCCCCTGCCTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 90 bp | AGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATAGAGCCTaGGCAGGCCAGACCCTGAAGGAATCAATTTGGGGCTTTTCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: RIGLSCWNLHMWNRA*AGQTLKESIWGFSG Trigger: TCCAGAAAAGCCCCAAATTGATTCCTTCAGGGTCTGGCCTGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCCTTGGTGCAGGCCCTTaGAGCATCTCTGGTGTCGAC | + |
|
Preference number: 2 (lower is better) Translates to: WGGRLVVAQLAKGRAPRSLGAGP*SISGVD Trigger: GTCGACACCAGAGATGCTCCAAGGGCCTGCACCAAG...GGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCCCCTGTGGCCTGGGTACAATaGTCACCTTTCACAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: EGGWWWLSWLRAEPLGPPVAWVQ*SPFTDS Trigger: GCTGTCTGTGAAAGGTGACCATTGTACCCAGGCCAC...AGGGGGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTCCCCCTCACATGGACAGAGAGGAGGCCTGCTCCAGTGATCCAGCCTGGTGGAACCTGCACATGTaGAATAGAGCCTGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LGPPHMDREEACSSDPAWWNLHM*NRAWAG Trigger: GCCTGCCCAGGCTCTATTCCACATGTGCAGGTTCCA...CCAGGCTGGATCACTGGAGCAGGCCTCCTCTCTGTCCATGTGAGGGGGACCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CAA 90 bp | GGGAAAGAGAGCAGGTCAGGCCCCTCTCTCTTAAGGCTGCAGGGTTaGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCCCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: GKESRSGPSLLRLQG*APGASPQVMVWPQI Trigger: TATCTGGGGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAGAGAGAGGGGCCTGACCTGCTCTCTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGAACCCTAGGCCAGAGCTCTTTGGTCCTGAGCGGAGCTTTTGGAGCTCCGCAAGGCAGGCAGGGGCATaGGACAGCTATACCTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: MNPRPELFGPERSFWSSARQAGA*DSYTCS Trigger: GCTGCAGGTATAGCTGTCTCATGCCCCTGCCTGCCT...TGCGGAGCTCCAAAAGCTCCGCTCAGGACCAAAGAGCTCTGGCCTAGGGTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTCCCCCTCACATGGACAGAGAGGAGGCCTGCTCCAGTGATCCAGCCTGGAGCAGGGGAGACTGTTaGAGCCAGCAGAAAATACTG | + |
|
Preference number: 2 (lower is better) Translates to: LGPPHMDREEACSSDPAWSRGDC*SQQKIL Trigger: CAGTATTTTCTGCTGGCTTCAACAGTCTCCCCTGCT...CCAGGCTGGATCACTGGAGCAGGCCTCCTCTCTGTCCATGTGAGGGGGACCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTCCCCCTCACATGGACAGAGAGGAGGCCTGCTCCAGTGATCCAGCCTGGAACCCAAAAGCAACTTaGTGCAGGCCCTTGGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LGPPHMDREEACSSDPAWNPKAT*CRPLEH Trigger: ATGCTCCAAGGGCCTGCACCAAGTTGCTTTTGGGTT...CCAGGCTGGATCACTGGAGCAGGCCTCCTCTCTGTCCATGTGAGGGGGACCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGGCTGGTGGTGGCTACCCAGCAGGACCTGTaGCCCAACTTTAAGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: PTGVGLGYHVWGGRLVVATQQDL*PNFKAS Trigger: TGATGCCTTAAAGTTGGGCCACAGGTCCTGCTGGGT...AGCCACCACCAGCCTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR TCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAGCATCTGTGAGGCTCTaGCCCAGCAGGACCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ILVSASRLWAKGVVCQDQASVRL*PSRTCG Trigger: GCCACAGGTCCTGCTGGGTCAGAGCCTCACAGATGC...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGAGAGGCCCAGTGGCCTaGGTACAATGGTCACCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GVRYTHWSGFGLSCLGRERGPVA*VQWSPF Trigger: GAAAGGTGACCATTGTACCCAGGCCACTGGGCCTCT...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGTCTGCATCCAGGCTTTaGGCAAAAGGGGTGGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: GVRYTHWSGFGLSCLGRESASRL*AKGVVC Trigger: GCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGA...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGGCTGGTGGTGGCTCTGAAGGAATCAATTTaGGGCTTTTCTGGACGGATG | + |
|
Preference number: 2 (lower is better) Translates to: PTGVGLGYHVWGGRLVVALKESI*GFSGRM Trigger: CATCCGTCCAGAAAAGCCCCAAATTGATTCCTTCAG...AGCCACCACCAGCCTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAATGTGGAATAGAGCCTaGGCAGGCCAGACCCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ILVSASRLWAKGVVCQDQMWNRA*AGQTLK Trigger: CTTCAGGGTCTGGCCTGCCCAGGCTCTATTCCACAT...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR TCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAATACCCCACATTCCTTaGGCTCCAGCTGGTTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: ILVSASRLWAKGVVCQDQIPHIP*APAGWS Trigger: TGACCAACCAGCTGGAGCTCAAGGAATGTGGGGTAT...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATAGAGCCTGGGCAAACGGGGACTGTCTCTaGTCCTCACAGGTCAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KRIGLSCWNLHMWNRAWANGDCL*SSQVRD Trigger: GTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTT...TGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR GCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAACCAAAAGCAACTTGGTaGAGGCCCTTGGAGCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: ILVSASRLWAKGVVCQDQPKATW*RPLEHL Trigger: GAGATGCTCCAAGGGCCTGCACCAAGTTGCTTTTGG...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGGACCTGTGGCCCAACTTTAAGGCATCAGAAGGCAAGGATACTGGGGCAGGTCAGCAAAGTCTTTTaGAGAGATTTCTCTATTACC | + |
|
Preference number: 2 (lower is better) Translates to: SRTCGPTLRHQKARILGQVSKVF*RDFSIT Trigger: GGTAATAGAGAAATCTCTGCAAAAGACTTTGCTGAC...CTGCCCCAGTATCCTTGCCTTCTGATGCCTTAAAGTTGGGCCACAGGTCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCCCTGAAGGAATCAATTaGGGGCTTTTCTGGACGGAT | + |
|
Preference number: 3 (lower is better) Translates to: WGGRLVVAQLAKGRAPRSPEGIN*GLFWTD Trigger: ATCCGTCCAGAAAAGCCCCAAATTGATTCCTTCAGG...GGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 72 bp | TTGGTCCTGAGCGGAGCTTTTGGAGCTCCGCATCTGTaGGGCTCTGACCCAGCAGGACCTGTGGCCCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: LVLSGAFGAPHL*GSDPAGPVAQL Trigger: AAGTTGGGCCACAGGTCCTGCTGGGTCAGAGCCTCACAGATGCGGAGCTCCAAAAGCTCCGCTCAGGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 72 bp | GCCTTCTGTCCACAGGGCAGACACCTGGAGAAAGGATaGACCCTAGGCCAGAGCTCTTTGGTCCTGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: AFCPQGRHLEKG*TLGQSSLVLSG Trigger: TCCGCTCAGGACCAAAGAGCTCTGGCCTAGGGTTCATCCTTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 72 bp | TGCACATGTGGAATAGAGCCTGGGCAGGCCAGACCCTaGAGGAATCAATTTGGGGCTTTTCTGGACGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: CTCGIEPGQARP*RNQFGAFLDGW Trigger: CCATCCGTCCAGAAAAGCCCCAAATTGATTCCTTCAGGGTCTGGCCTGCCCAGGCTCTATTCCACATGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR GCA 72 bp | GTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTaGCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSASRLWAKGVV*QDQGFSLLSTG Trigger: CCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 72 bp | CTGGGTTTGAAAGAACATGGTAGAGGCCCAGTGGCCTaGGTACAATGGTCACCTTTCACAGACAGCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGLKEHGRGPVA*VQWSPFTDSRG Trigger: TCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCCAGGCCACTGGGCCTCTACCATGTTCTTTCAAACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAGGCTTTAGCCAAACCCAAAAGCAACTaGGTGCAGGCCCTTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LHPGFGQKGWFAKIKALAKPKSN*VQALGA Trigger: TGCTCCAAGGGCCTGCACCAAGTTGCTTTTGGGTTT...GGCTAAAGCCTTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 72 bp | TTAAGCTGTTGGAACCTGCACATGTGGAATAGAGCCTaGGCAGGCCAGACCCTGAAGGAATCAATTTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSCWNLHMWNRA*AGQTLKESIWG Trigger: GCCCCAAATTGATTCCTTCAGGGTCTGGCCTGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 72 bp | CAGCAGATGACTGGGAAGAGAATAGGGTTAAGCTGTTaGAACCTGCACATGTGGAATAGAGCCTGGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QQMTGKRIGLSC*NLHMWNRAWAG Trigger: GCCTGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGATGACTGGGAAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATACTTGGTGCAGGCCCTaGGAGCATCTCTGGTGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: QMTGKRIGLSCWNLHMWNTWCRP*EHLWCR Trigger: TCGACACCAGAGATGCTCCAAGGGCCTGCACCAAGT...ATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 72 bp | CAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTaGAGCCAGCAGAAAATACTGGTCTCTGCATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QWSPFTDSRGDC*SQQKILVSASR Trigger: CCTGGATGCAGAGACCAGTATTTTCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 72 bp | AAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTaGAATAGAGCCTGGGCAGGCCAGACCCTGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KRIGLSCWNLHM*NRAWAGQTLKE Trigger: TTCCTTCAGGGTCTGGCCTGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR CCA 72 bp | CAGGGGCATGAGACAGCTATACCTGCAGCAGATGACTaGGAAGAGAATAGGGTTAAGCTGTTGGAACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QGHETAIPAADD*EENRVKLLEPA Trigger: TGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTGCTGCAGGTATAGCTGTCTCATGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR TCA 72 bp | AGTCAATTGTCGAAGTTTAAAAACGGGGACTGTCTCTaGTCCTCACAGGTCAGAGACACCTCCAAAGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SQLSKFKNGDCL*SSQVRDTSKGT Trigger: AGTGCCTTTGGAGGTGTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTTTTTAAACTTCGACAATTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTAAAAACGGGGACTGTCTCTGATCCTCACAGGTCAGAGACACCTCCAAAGGGTCAGCAAAGTCTTTaGCAGAGATTTCTCTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLKTGTVSDPHRSETPPKGQQSL*QRFLYY Trigger: GTAATAGAGAAATCTCTGCAAAAGACTTTGCTGACC...CTTTGGAGGTGTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTTTTTAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| 3UTR GCA 72 bp | TCCTTGAGCTCCAGCTGGTTGGTCAGCAAAGTCTTTTaGAGAGATTTCTCTATTACCCAAAGAAAGGACATT | + |
|
Preference number: 3 (lower is better) Translates to: SLSSSWLVSKVF*RDFSITQRKDI Trigger: AATGTCCTTTCTTTGGGTAATAGAGAAATCTCTGCAAAAGACTTTGCTGACCAACCAGCTGGAGCTCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCGGGTTGAGGAGCAGCTaGAGGGATGCAGATGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGGRLVVAQLAKGRAPRSGLRSS*RDADGP Trigger: GGGCCCATCTGCATCCCTCCAGCTGCTCCTCAACCC...GGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | TGGGGAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCGCGAAGCCCTTTAGCTaGCCATCCTGGCCACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WGGRLVVAQLAKGRAPRSAKPFS*PSWPHA Trigger: GGCATGTGGCCAGGATGGGCAGCTAAAGGGCTTCGC...GGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CTAGGTCCCCCTCACATGGACAGAGAGGAGGCCTGCTCCAGTGATCCAGCCTGGCCCCAAGGAGGGAGTTaGAAGGTTGGGCCCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPPHMDREEACSSDPAWPQGGS*KVGPRP Trigger: AGGCCGGGGCCCAACCTTCCAACTCCCTCCTTGGGG...CCAGGCTGGATCACTGGAGCAGGCCTCCTCTCTGTCCATGTGAGGGGGACCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ACACCTCCAAAGGCACTCAAGAGGCCAGAACACAGGAGTGACGAGGCAGGAGAGGGTTGGGCCCCGGCCTaGAGGGTACCCAGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPKALKRPEHRSDEAGEGWAPA*RVPRGE Trigger: CTCACCTCTGGGTACCCTCCAGGCCGGGGCCCAACC...CTCTCCTGCCTCGTCACTCCTGTGTTCTGGCCTCTTGAGTGCCTTTGGAGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR TCA 90 bp | CTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAGGCTTTAGCCCTCAGCGGCGGCCGGTaGGTAACGGACACGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHPGFGQKGWFAKIKALALSGGR*VTDTSA Trigger: GGCCGACGTGTCCGTTACTCACCGGCCGCCGCTGAG...GGCTAAAGCCTTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGTCCCCCTCACATGGACAGAGAGGAGGCCTGCTCCAGTGATCCAGCCTGGTCGGTAGGCTGCAACTaGACTGACAGCTCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPPHMDREEACSSDPAWSVGCN*TDSSRS Trigger: AGAGCGGGAGCTGTCAGTTCAGTTGCAGCCTACCGA...CCAGGCTGGATCACTGGAGCAGGCCTCCTCTCTGTCCATGTGAGGGGGACCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCCCCTCTTTGTTGCCATTGTTaGTACCACTGCCTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGGWWWLSWLRAEPLGPPLCCHC*YHCLHQ Trigger: CTGGTGGAGGCAGTGGTAGCAACAATGGCAACAAAG...AGGGGGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGACCTGTGGCCCAACTTTAAGGCATCAGAAGGCAAGGATACTGGGGCAGGCTGGCCCACGTAGCTaGCCTCTGGGCTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTCGPTLRHQKARILGQAGPRS*PLGWAQ Trigger: CTGAGCCCAGCCCAGAGGGCAGCTACGTGGGCCAGC...CTGCCCCAGTATCCTTGCCTTCTGATGCCTTAAAGTTGGGCCACAGGTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCCCCTAGTCAGACTTGGCCCTaGCTGCTGAGTCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGGWWWLSWLRAEPLGPPSQTWP*LLSLSS Trigger: TGAAGAAAGACTCAGCAGCCAGGGCCAAGTCTGACT...AGGGGGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAGGCTTTAGCCGGGGACCCAGACCCATaGGCTCCCGGTCACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHPGFGQKGWFAKIKALAGDPDP*APGHPQ Trigger: CTGGGGGTGACCGGGAGCCCATGGGTCTGGGTCCCC...GGCTAAAGCCTTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ATGAACCCTAGGCCAGAGCTCTTTGGTCCTGAGCGGAGCTTTTGGAGCTCCGCAAGCTGCCCTCTGGGCTaGGCTCAGGTGAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MNPRPELFGPERSFWSSASCPLG*AQVRAA Trigger: TGCTGCCCTCACCTGAGCCCAGCCCAGAGGGCAGCT...TGCGGAGCTCCAAAAGCTCCGCTCAGGACCAAAGAGCTCTGGCCTAGGGTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGAGCAGCGCTCCAGGCTaGCAAAGGGCCGCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRYTHWSGFGLSCLGRESSAPG*QRAAPA Trigger: AGCTGGTGCGGCCCTTTGGCAGCCTGGAGCGCTGCT...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCCTCTGCAGGGCTAGCTaGAGCAGTGCAGTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAAGFGSRSKPTGNGVALCRAS*SSAVDR Trigger: CCTGTCCACTGCACTGCTGCAGCTAGCCCTGCAGAG...GGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCCGGCGGTTACGGAACTaGCGCTCAGTGTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAAGFGSRSKPTGNGVARRLRN*RSVCSR Trigger: CCTGGAACACACTGAGCGCCAGTTCCGTAACCGCCG...GGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ATGAACCCTAGGCCAGAGCTCTTTGGTCCTGAGCGGAGCTTTTGGAGCTCCGCAAGTGAGCTGGGTTGCTaGGGGACCCAGACCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MNPRPELFGPERSFWSSASELGC*GTQTHG Trigger: CCCATGGGTCTGGGTCCCCCAGCAACCCAGCTCACT...TGCGGAGCTCCAAAAGCTCCGCTCAGGACCAAAGAGCTCTGGCCTAGGGTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR TCA 90 bp | CTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCATCCCAGGCTTCTTCTaGCCCTGGCTCTGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAAGFGSRSKPTGNGVAIPGFF*PWLWFW Trigger: CCAGAACCAGAGCCAGGGTCAGAAGAAGCCTGGGAT...GGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ATGAACCCTAGGCCAGAGCTCTTTGGTCCTGAGCGGAGCTTTTGGAGCTCCGCACACATACAGTGTGCGTaGGCCCAGTGGCTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MNPRPELFGPERSFWSSAHIQCA*AQWLAQ Trigger: CTGGGCAAGCCACTGGGCCCACGCACACTGTATGTG...TGCGGAGCTCCAAAAGCTCCGCTCAGGACCAAAGAGCTCTGGCCTAGGGTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGGACCTGTGGCCCAACTTTAAGGCATCAGAAGGCAAGGATACTGGGGCAGGGAGGCCTCTATGGTTaGAGCCTCGGAGCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTCGPTLRHQKARILGQGGLYG*SLGAPQ Trigger: CTGTGGGGCTCCGAGGCTCCAACCATAGAGGCCTCC...CTGCCCCAGTATCCTTGCCTTCTGATGCCTTAAAGTTGGGCCACAGGTCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | GGGTACAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTGAAGCCAGCAGAGGTGACTGTGACCATTaGGCCCAGGGCCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYNGHLSQTAGETVEASRGDCDH*AQGPGP Trigger: TGGGCCTGGGCCCTGGGCCCAATGGTCACAGTCACC...TCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR TCA 90 bp | GGGTACAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTGAAGCCAGCAGACCACTGGCTCCCCCATaGAGCAGAGGGTTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GYNGHLSQTAGETVEASRPLAPP*SRGLRS Trigger: GCTCCTCAACCCTCTGCTTCATGGGGGAGCCAGTGG...TCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR TCA 90 bp | CTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAGGCTTTAGCCTCAGGTGGCTCTGCTTaGGGCCAGCCTGTAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHPGFGQKGWFAKIKALASGGSA*GQPVGH Trigger: GTGGCCTACAGGCTGGCCTCAAGCAGAGCCACCTGA...GGCTAAAGCCTTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGGAGCAGCTGGAGGGATaGAGATGGGCCCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLQGLAPGASPQVMVWEQLEG*RWAQVV Trigger: AACAACCTGGGCCCATCTGCATCCCTCCAGCTGCTC...CCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGCATGTACTTCCTGGTTaGTCACGTCCCCCGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRYTHWSGFGLSCLGREHVLPG*SRPPGG Trigger: GCCTCCCGGGGGACGTGACCAACCAGGAAGTACATG...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGTGTGCGTGGGCCCAGTaGCTTGCCCAGCAAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVRYTHWSGFGLSCLGRECAWAQ*LAQQVR Trigger: TCTGACTTGCTGGGCAAGCCACTGGGCCCACGCACA...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ACACCTCCAAAGGCACTCAAGAGGCCAGAACACAGGAGTGACGAGGCAGGAGAGAAAGACACACGTAGGTaGCTGTCACCCAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPPKALKRPEHRSDEAGEKDTRR*LSPRAW Trigger: CCAGGCCCTGGGTGACAGCCACCTACGTGTGTCTTT...CTCTCCTGCCTCGTCACTCCTGTGTTCTGGCCTCTTGAGTGCCTTTGGAGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAGAGCAGGTCAGGCCCCTCTCTCTTAAGGCTGCAGGGTTTGGCTCCACTGGAGGGATGCAGATaGGCCCAGGTTGTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GKESRSGPSLLRLQGLAPLEGCR*AQVVQQ Trigger: CTGTTGAACAACCTGGGCCCATCTGCATCCCTCCAG...TGGAGCCAAACCCTGCAGCCTTAAGAGAGAGGGGCCTGACCTGCTCTCTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGACAGCCTTGTTCAGGTaGCTCTGCTTGAGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLQGLAPGASPQVMVWTALFR*LCLRPA Trigger: GGCTGGCCTCAAGCAGAGCCACCTGAACAAGGCTGT...CCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCGGTGAGGGCAGCAGGTaGGAAAAACTGCGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAAGFGSRSKPTGNGVAGEGSR*EKLRFW Trigger: CCAGAAACGCAGTTTTTCCCACCTGCTGCCCTCACC...GGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGGTGAGGGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTCTCGGATCAGTATCTTaGGGCGGTTACGGAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWGEGVRYTHWSGFGLSCLGSVS*GGYGTG Trigger: GCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAG...ACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCCCTCACCCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGATGGCAGCTTCAGCCTaGTCCCCATTCAGCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLQGLAPGASPQVMVWMAASA*SPFSRV Trigger: GACTCTGCTGAATGGGGAGCAGGCTGAAGCTGCCAT...CCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | GGGTACAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTGAAGCCAGCAGACCAGGAGACCCTGCTTaGCACTGGCTCCCCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GYNGHLSQTAGETVEASRPGDPA*HWLPHE Trigger: TTCATGGGGGAGCCAGTGGCAAGCAGGGTCTCCTGG...TCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | GGGTACAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTGAAGCCAGCAGATGGAGTGAGCTGGGTTaGTGGGGGACCCAGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYNGHLSQTAGETVEASRWSELG*WGTQTH Trigger: ATGGGTCTGGGTCCCCCAGCAACCCAGCTCACTCCA...TCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAGAGCAGGTCAGGCCCCTCTCTCTTAAGGCTGCAGGGTTTGGCTCCAGAAAAACTGCGTTTCTaGCCACCCAGTGGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKESRSGPSLLRLQGLAPEKLRF*PPSGVF Trigger: GAAGACCCCACTGGGTGGCCAGAAACGCAGTTTTTC...TGGAGCCAAACCCTGCAGCCTTAAGAGAGAGGGGCCTGACCTGCTCTCTTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCTTCTTGTGCTGCCTCTaGCATCTCTGCTGTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKAAGFGSRSKPTGNGVAFLCCL*HLCCLV Trigger: TACGAGACAGCAGAGATGGCAGAGGCAGCACAAGAA...GGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CATTCCTTGAGCTCCAGCTGGTTGGTCAGCAAAGTCTTTTGCAGAGATTTCTCTGTGCTGCTAGCATGCTaGGGCCAGGGGGACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSSWLVSKVFCRDFSVLLAC*GQGDLG Trigger: CCCCAGGTCCCCCTGGCCGCAGCATGCTAGCAGCAC...AGAGAAATCTCTGCAAAAGACTTTGCTGACCAACCAGCTGGAGCTCAAGGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATAGAGCCTGGGCAGCACCCAGGAGACCCTaGTTGCCACTGGCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRIGLSCWNLHMWNRAWAAPRRP*LPLAPP Trigger: TGGGGGAGCCAGTGGCAAGCAGGGTCTCCTGGGTGC...TGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAAAGGGAGTTGGAAGGTTaGGCCCCGGCCTGGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FAKIKALAFCPQGRHLEKRELEG*APAWRV Trigger: TACCCTCCAGGCCGGGGCCCAACCTTCCAACTCCCT...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAACCCATCCTGGCCACATaGCAGCTGACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FAKIKALAFCPQGRHLEKPILAT*QLTEGG Trigger: CCCACCTTCTGTCAGCTGGCATGTGGCCAGGATGGG...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAACTGTCACCCAGGGCCTaGCCATCTGCCCGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FAKIKALAFCPQGRHLEKLSPRA*PSARSC Trigger: ACAAGAACGGGCAGATGGCCAGGCCCTGGGTGACAG...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAAGGTCATGTACTTCCTaGTTGGTCACGTCCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVSASRLWAKGVVCQDQRSCTS*LVTSPG Trigger: CCCGGGGGACGTGACCAACCAGGAAGTACATGACCT...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAACGAAGGCGGCTCTGGTaGAAGGTGTTGATGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILVSASRLWAKGVVCQDQRRRLW*KVLMAA Trigger: AGCTGCCATCAACACCTTCCACCAGAGCCGCCTTCG...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGGAAGTAGGAGGTGGGTaGGCCAGAGTAAAAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVRYTHWSGFGLSCLGREEVGGG*ARVKMR Trigger: TCTCATTTTTACTCTGGCTCACCCACCTCCTACTTC...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAACCAGCATCTGTCCAGTaGACATACAGTGTGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVSASRLWAKGVVCQDQPASVQ*TYSVRG Trigger: CCCACGCACACTGTATGTGCACTGGACAGATGCTGG...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGGTCTCTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAATGCCTCTGCCATCTCTaGTGTCTCGTACTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILVSASRLWAKGVVCQDQCLCHL*CLVLQH Trigger: GTGCTGGAGTACGAGACAGCAGAGATGGCAGAGGCA...TTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | GTTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAACATTGTTGCTACCACTaGCTCCACCAGGAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCQDQGFSLLSTGQTPGEHCCYH*LHQELQ Trigger: CTGCAGTTCCTGGTGGAGGCAGTGGTAGCAACAATG...TTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAACCAGCAAGTCAGACTTaGCCCTGGCTGCTGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FAKIKALAFCPQGRHLEKPASQT*PWLLSL Trigger: AAGACTCAGCAGCCAGGGCCAAGTCTGACTTGCTGG...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CATTCCTTGAGCTCCAGCTGGTTGGTCAGCAAAGTCTTTTGCAGAGATTTCTCTCTCTGGTTCTGGCTCTaGCTCTGCAGGGCTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSSWLVSKVFCRDFSLWFWL*LCRASC Trigger: GCAGCTAGCCCTGCAGAGCCAGAGCCAGAACCAGAG...AGAGAAATCTCTGCAAAAGACTTTGCTGACCAACCAGCTGGAGCTCAAGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTAAAAACGGGGACTGTCTCTGATCCTCACAGGTCAGAGACACCTCCAAAGTGCCCGTTCTTGTGCTaGCTCTGCCATCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKTGTVSDPHRSETPPKCPFLC*LCHLCC Trigger: ACAGCAGAGATGGCAGAGGCAGCACAAGAACGGGCA...CTTTGGAGGTGTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTTTTTAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGACTGGGAAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATAAGCCAGGTGGCAGGTaGTCCACACAGAGGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QMTGKRIGLSCWNLHMWNKPGGR*STQRHR Trigger: TCGATGCCTCTGTGTGGACCACCTGCCACCTGGCTT...ATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTAAAAACGGGGACTGTCTCTGATCCTCACAGGTCAGAGACACCTCCAAAGATCACTGAAGCCAGGTaGCAGGTGGTCCACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTGTVSDPHRSETPPKITEAR*QVVHTE Trigger: CTCTGTGTGGACCACCTGCCACCTGGCTTCAGTGAT...CTTTGGAGGTGTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTTTTTAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CATTCCTTGAGCTCCAGCTGGTTGGTCAGCAAAGTCTTTTGCAGAGATTTCTCTTTGTTCAGGTGGCTCTaGTTGAGGCCAGCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSSWLVSKVFCRDFSLFRWL*LRPACR Trigger: CCTACAGGCTGGCCTCAAGCAGAGCCACCTGAACAA...AGAGAAATCTCTGCAAAAGACTTTGCTGACCAACCAGCTGGAGCTCAAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGACTGGGAAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATTTAAGAGCCGTGGCCTaGGCAGCAATGAGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMTGKRIGLSCWNLHMWNLRAVA*AAMSAA Trigger: AGCAGCACTCATTGCTGCCCAGGCCACGGCTCTTAA...ATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAAAGGTTGTTCAACAGCTaGAGAAGATTTGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FAKIKALAFCPQGRHLEKRLFNS*RRFGSG Trigger: GCCTGAGCCAAATCTTCTGCAGCTGTTGAACAACCT...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTAAAAACGGGGACTGTCTCTGATCCTCACAGGTCAGAGACACCTCCAAAGCCATATCCTTTAGAGTaGCCAGTGCGCTCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLKTGTVSDPHRSETPPKPYPLE*PVRSLY Trigger: GTACAGTGAGCGCACTGGCCACTCTAAAGGATATGG...CTTTGGAGGTGTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTTTTTAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTAAAAACGGGGACTGTCTCTGATCCTCACAGGTCAGAGACACCTCCAAAGCAGCTCTTCAAATTGTaGCTGTGTCAGACTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTGTVSDPHRSETPPKQLFKL*LCQTRW Trigger: CCACCTAGTCTGACACAGGCACAATTTGAAGAGCTG...CTTTGGAGGTGTCTCTGACCTGTGAGGATCAGAGACAGTCCCCGTTTTTAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | ACACCTCCAAAGGCACTCAAGAGGCCAGAACACAGGAGTGACGAGGCAGGAGAGTTTCTTCATGTACTCTaGAAAGCCATATCCTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPPKALKRPEHRSDEAGEFLHVL*KAISFR Trigger: TCTAAAGGATATGGCTTTGCAGAGTACATGAAGAAA...CTCTCCTGCCTCGTCACTCCTGTGTTCTGGCCTCTTGAGTGCCTTTGGAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR GCA 90 bp | CAGATGACTGGGAAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATTTTGGAAGGCTTTGTTaGCATTGTTGCTACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QMTGKRIGLSCWNLHMWNFGRLC*HCCYHC Trigger: GCAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAA...ATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTTCCCAGTCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | CCGGCGATCGACGGTCTCGGGAGTTTCCGCTTCGGCCTCCGCCTCTaGGCTCAGCGGCGGCCGGTGAGTAACGGACACGTCGGCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PAIDGLGSFRFGLRL*AQRRPVSNGHVGRH Trigger: ATGGCGGCCGACGTGTCCGTTACTCACCGGCCGCCGCTGAGCCCAGAGGCGGAGGCCGAAGCGGAAACTCCCGAGACCGTCGATCGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | GCAGGGGGCGCACCCAGGAGACCCTGCTTGCCACTGGCTCCCCCATaGAGCAGAGGGTTGAGGAGCAGCTGGAGGGATGCAGATGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGGAPRRPCLPLAPP*SRGLRSSWRDADGP Trigger: GGGCCCATCTGCATCCCTCCAGCTGCTCCTCAACCCTCTGCTTCATGGGGGAGCCAGTGGCAAGCAGGGTCTCCTGGGTGCGCCCCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | ATGCTGCGGCCAGGGGGACCTGGGGCACAGAAAGACACACGTAGGTaGCTGTCACCCAGGGCCTGGCCATCTGCCCGTTCTTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLRPGGPGAQKDTRR*LSPRAWPSARSCAA Trigger: GGCAGCACAAGAACGGGCAGATGGCCAGGCCCTGGGTGACAGCCACCTACGTGTGTCTTTCTGTGCCCCAGGTCCCCCTGGCCGCAGCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | GAGGGAGTTGGAAGGTTGGGCCCCGGCCTGGAGGGTACCCAGAGGTaGGTCGCCCAGGATCCCAGGCTTCTTCTGACCCTGGCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGVGRLGPGLEGTQR*VAQDPRLLLTLALV Trigger: AACCAGAGCCAGGGTCAGAAGAAGCCTGGGATCCTGGGCGACTCACCTCTGGGTACCCTCCAGGCCGGGGCCCAACCTTCCAACTCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | GTTTCTGGCCACCCAGTGGGGTCTTCAGCAGGTGACTGTGACCATTaGGCCCAGGGCCCAGGCCCAGGAGCCCTTCACTGGAGCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VSGHPVGSSAGDCDH*AQGPGPGALHWSPL Trigger: CAATGGGCTCCAGTGAAGGGCTCCTGGGCCTGGGCCCTGGGCCCAATGGTCACAGTCACCTGCTGAAGACCCCACTGGGTGGCCAGAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCCCCTTCAGGCAGGAGTCCCTaGCCTCGATTAAGAGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGGWWWLSWLRAEPLGPPSGRSP*PRLRAV Trigger: CACGGCTCTTAATCGAGGCAAGGGACTCCTGCCTGA...AGGGGGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | TCCCACATCTGTGGGATAATCAAAGCCATAGCTGTCAGGCAGCCCTaGCTCAGGGGGCAGGCGGTTGCTGGCGATGGGGCTGAGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SHICGIIKAIAVRQP*LRGQAVAGDGAEQA Trigger: CGCCTGCTCAGCCCCATCGCCAGCAACCGCCTGCCCCCTGAGCCAGGGCTGCCTGACAGCTATGGCTTTGATTATCCCACAGATGTGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | ATTGGGCCCAGGGCCCAGGCCCAGGAGCCCTTCACTGGAGCCCATTaGAGAGGAACCAACAGCCTTGTTCAGGTGGCTCTGCTTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IGPRAQAQEPFTGAH*RGTNSLVQVALLEA Trigger: GGCCTCAAGCAGAGCCACCTGAACAAGGCTGTTGGTTCCTCTCCAATGGGCTCCAGTGAAGGGCTCCTGGGCCTGGGCCCTGGGCCCAAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGTCAGGGGGCAGGCGGTaGCTGGCGATGGGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRLQGLAPGASPQVMVWSGGRR*LAMGLS Trigger: GCTCAGCCCCATCGCCAGCAACCGCCTGCCCCCTGA...CCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | GGTGGTAGGTTGGCCACGCACAGCAGAGCATCGGTAGGCTGCAACTaGACTGACAGCTCCCGCTCTCGAAGGCGGCTCTGGTGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRLATHSRASVGCN*TDSSRSRRRLWWKV Trigger: CACCTTCCACCAGAGCCGCCTTCGAGAGCGGGAGCTGTCAGTTCAGTTGCAGCCTACCGATGCTCTGCTGTGCGTGGCCAACCTACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | CTTCCTGGTTGGTCACGTCCCCCGGGAGGCCTCGGATCAGTATCTTaGGGCGGTTACGGAACTGGCGCTCAGTGTGTTCCAGGCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGWSRPPGGLGSVS*GGYGTGAQCVPGVS Trigger: GGAAACGCCTGGAACACACTGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGGCCTCCCGGGGGACGTGACCAACCAGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | TCCCCCGGGAGGCCTCGGATCAGTATCTTGCGGCGGTTACGGAACTaGCGCTCAGTGTGTTCCAGGCGTTTCCGGATCTCTTCCGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: SPGRPRISILRRLRN*RSVCSRRFRISSGS Trigger: CGATCCGGAAGAGATCCGGAAACGCCTGGAACACACTGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGGCCTCCCGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | AGAGCCCGGCGCAGGGCATCCACATCACTGAAGCCAGGTGGCAGGTaGTCCACACAGAGGCATCGAGAGTGCAACAATGCAGGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RARRRASTSLKPGGR*STQRHRECNNAGVS Trigger: GCTGACCCCTGCATTGTTGCACTCTCGATGCCTCTGTGTGGACCACCTGCCACCTGGCTTCAGTGATGTGGATGCCCTGCGCCGGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | TTTGGCTCAGGCAGGAGTCCCTTGCCTCGATTAAGAGCCGTGGCCTaGGCAGCAATGAGTGCTGCTAGCATGCTGCGGCCAGGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: FGSGRSPLPRLRAVA*AAMSAASMLRPGGP Trigger: AGGTCCCCCTGGCCGCAGCATGCTAGCAGCACTCATTGCTGCCCAGGCCACGGCTCTTAATCGAGGCAAGGGACTCCTGCCTGAGCCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGGAGCGGCGGCAACTCTaGTTCGGGCGCCCGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GVRYTHWSGFGLSCLGREERRQL*FGRPAI Trigger: GATCGCCGGGCGCCCGAACAAGAGTTGCCGCCGCTC...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | GGGTATAGACCACTGACAGAGCCCGGCGCAGGGCATCCACATCACTaGAGCCAGGTGGCAGGTGGTCCACACAGAGGCATCGAGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYRPLTEPGAGHPHH*SQVAGGPHRGIESA Trigger: TGCACTCTCGATGCCTCTGTGTGGACCACCTGCCACCTGGCTTCAGTGATGTGGATGCCCTGCGCCGGGCTCTGTCAGTGGTCTATACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | ATCCTGGCCACATGCCAGCTGACAGAAGGTGGGGGTATAGACCACTaGCAGAGCCCGGCGCAGGGCATCCACATCACTGAAGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILATCQLTEGGGIDH*QSPAQGIHITEARW Trigger: CCACCTGGCTTCAGTGATGTGGATGCCCTGCGCCGGGCTCTGTCAGTGGTCTATACCCCCACCTTCTGTCAGCTGGCATGTGGCCAGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | ACACCTCCAAAGGCACTCAAGAGGCCAGAACACAGGAGTGACGAGGCAGGAGAGGGGAGGCCTCTATGGTaGGAGCCTCGGAGCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TPPKALKRPEHRSDEAGEGRPLW*EPRSPT Trigger: TGTGGGGCTCCGAGGCTCCAACCATAGAGGCCTCCC...CTCTCCTGCCTCGTCACTCCTGTGTTCTGGCCTCTTGAGTGCCTTTGGAGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | CGAGAGTGCAACAATGCAGGGGTCAGCTGCCCAGCATCTGTCCAGTaGACATACAGTGTGCGTGGGCCCAGTGGCTTGCCCAGCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RECNNAGVSCPASVQ*TYSVRGPSGLPSKS Trigger: TGACTTGCTGGGCAAGCCACTGGGCCCACGCACACTGTATGTGCACTGGACAGATGCTGGGCAGCTGACCCCTGCATTGTTGCACTCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | GGCAGGCGGTTGCTGGCGATGGGGCTGAGCAGGCGGGACTTCATTTaGAAGGCTTTGTTGCCATTGTTGCTACCACTGCCTCCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRRLLAMGLSRRDFI*KALLPLLLPLPPPG Trigger: TCCTGGTGGAGGCAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAATGAAGTCCCGCCTGCTCAGCCCCATCGCCAGCAACCGCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | CTGCATCCAGGCTTTGGGCAAAAGGGGTGGTTTGCCAAGATCAAGGCTTTAGCCTCCCCAAGGAGGGAGTaGGAAGGTTGGGCCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHPGFGQKGWFAKIKALASPRRE*EGWAPA Trigger: GGCCGGGGCCCAACCTTCCAACTCCCTCCTTGGGGA...GGCTAAAGCCTTGATCTTGGCAAACCACCCCTTTTGCCCAAAGCCTGGATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCCCAGATACCCCACATTCCTTGCAGCCCCGGGTCTCCTaGCCTGCCAGGTTACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRSKPTGNGVAPDTPHSLQPRVS*PARLLD Trigger: ATCCAGTAACCTGGCAGGCAAGGAGACCCGGGGCTG...CAAGGAATGTGGGGTATCTGGGGCCACACCATTACCTGTGGGCTTGCTCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | AGTGGCCAGTGCGCTCACTGTACACTAGGAAGCAGCGCTCCAGGCTaGCAAAGGGCCGCACCAGCTCTTCAAATTGTGCCTGTGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQCAHCTLGSSAPG*QRAAPALQIVPVSD Trigger: GTCTGACACAGGCACAATTTGAAGAGCTGGTGCGGCCCTTTGGCAGCCTGGAGCGCTGCTTCCTAGTGTACAGTGAGCGCACTGGCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | TGGTCCACACAGAGGCATCGAGAGTGCAACAATGCAGGGGTCAGCTaGCCAGCATCTGTCCAGTGCACATACAGTGTGCGTGGGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WSTQRHRECNNAGVS*PASVQCTYSVRGPS Trigger: ACTGGGCCCACGCACACTGTATGTGCACTGGACAGATGCTGGGCAGCTGACCCCTGCATTGTTGCACTCTCGATGCCTCTGTGTGGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | TGGGGAGGGAGGCTGGTGGTGGCTCAGCTGGCTAAGGGCAGAGCCCCTAGGTCCGCTGTCCCTTTGTATTaGTCCACGAAACAGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGGRLVVAQLAKGRAPRSAVPLY*STKQYL Trigger: CAAGTACTGTTTCGTGGACAAATACAAAGGGACAGC...GGACCTAGGGGCTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | GAACTGACAGCTCCCGCTCTCGAAGGCGGCTCTGGTGGAAGGTGTTaGTGGCAGCTTCAGCCTGCTCCCCATTCAGCAGAGTCACAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELTAPALEGGSGGRC*WQLQPAPHSAESQK Trigger: CTTTTGTGACTCTGCTGAATGGGGAGCAGGCTGAAGCTGCCATCAACACCTTCCACCAGAGCCGCCTTCGAGAGCGGGAGCTGTCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | ACTGGCTCCCCCATGAAGCAGAGGGTTGAGGAGCAGCTGGAGGGATaGAGATGGGCCCAGGTTGTTCAACAGCTGCAGAAGATTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGSPMKQRVEEQLEG*RWAQVVQQLQKIWL Trigger: GAGCCAAATCTTCTGCAGCTGTTGAACAACCTGGGCCCATCTGCATCCCTCCAGCTGCTCCTCAACCCTCTGCTTCATGGGGGAGCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | CCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGGCTGGTGGTGGCTACAGCTGCAGAAGATTaGGCTCAGGCAGGAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTGVGLGYHVWGGRLVVATAAED*AQAGVP Trigger: AGGGACTCCTGCCTGAGCCAAATCTTCTGCAGCTGT...AGCCACCACCAGCCTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAAGAGGGAGTTGGAAGGTaGGGCCCCGGCCTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FAKIKALAFCPQGRHLEKEGVGR*GPGLEG Trigger: ACCCTCCAGGCCGGGGCCCAACCTTCCAACTCCCTC...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACCTGTGGCCCAACTTTAAGGCATCAGAAGGCAAGGATACTGGGGCAGCCTCGGATCAGTATCTaGCGGCGGTTACGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRTCGPTLRHQKARILGQPRISI*RRLRNW Trigger: CCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGG...CTGCCCCAGTATCCTTGCCTTCTGATGCCTTAAAGTTGGGCCACAGGTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | GGGTACAATGGTCACCTTTCACAGACAGCAGGGGAGACTGTTGAAGCCAGCAGATCATGTACTTCCTGGTaGGTCACGTCCCCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GYNGHLSQTAGETVEASRSCTSW*VTSPGR Trigger: CCTCCCGGGGGACGTGACCAACCAGGAAGTACATGA...TCTGCTGGCTTCAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGGTGAGGGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTGCAGATGGGCCCAGGTaGTTCAACAGCTGCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GWGEGVRYTHWSGFGLSCADGPR*FNSCRR Trigger: TCTTCTGCAGCTGTTGAACAACCTGGGCCCATCTGC...ACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCCCTCACCCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | CCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGGCTGGTGGTGGCTGCTTTGTTGCCATTGTaGCTACCACTGCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PTGVGLGYHVWGGRLVVAALLPL*LPLPPP Trigger: TGGTGGAGGCAGTGGTAGCAACAATGGCAACAAAGC...AGCCACCACCAGCCTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCTTCACTGGAGCCCATaGGAGAGGAACCAACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLRLQGLAPGASPQVMVWLHWSP*ERNQQP Trigger: AGGCTGTTGGTTCCTCTCCAATGGGCTCCAGTGAAG...CCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | AGGAGCAGCTGGAGGGATGCAGATGGGCCCAGGTTGTTCAACAGCTaGAGAAGATTTGGCTCAGGCAGGAGTCCCTTGCCTCGATTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSSWRDADGPRLFNS*RRFGSGRSPLPRLR Trigger: TCTTAATCGAGGCAAGGGACTCCTGCCTGAGCCAAATCTTCTGCAGCTGTTGAACAACCTGGGCCCATCTGCATCCCTCCAGCTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 90 bp | GTGTGCGTGGGCCCAGTGGCTTGCCCAGCAAGTCAGACTTGGCCCTaGCTGCTGAGTCTTTCTTCATGTACTCTGCAAAGCCATATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVGPVACPASQTWP*LLSLSSCTLQSHIL Trigger: AAGGATATGGCTTTGCAGAGTACATGAAGAAAGACTCAGCAGCCAGGGCCAAGTCTGACTTGCTGGGCAAGCCACTGGGCCCACGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAAACGTGGGCCCAGTGGCTaGCCCAGCAAGTCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FAKIKALAFCPQGRHLEKRGPSG*PSKSDL Trigger: CAAGTCTGACTTGCTGGGCAAGCCACTGGGCCCACG...TTTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATAGAGCCTGGGCAGGATGCGGTAGTCCTTaGGGGGCTCCCCCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRIGLSCWNLHMWNRAWAGCGSP*GAPPAV Trigger: CACTGCTGGGGGAGCCCCCAAAGGACTACCGCATCC...TGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | GTTTGCCAAGATCAAGGCTTTAGCCTTCTGTCCACAGGGCAGACACCTGGAGAATTCAGGTGGCTCTGCTaGAGGCCAGCCTGTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VCQDQGFSLLSTGQTPGEFRWLC*RPACRP Trigger: TGGCCTACAGGCTGGCCTCAAGCAGAGCCACCTGAA...TTCTCCAGGTGTCTGCCCTGTGGACAGAAGGCTAAAGCCTTGATCTTGGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAATAGGGTTAAGCTGTTGGAACCTGCACATGTGGAATAGAGCCTGGGCAGGGGCCCACTGTCCTTaGGGAGGCCTCTATGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRIGLSCWNLHMWNRAWAGAHCP*GGLYGW Trigger: CCAACCATAGAGGCCTCCCAAAGGACAGTGGGCCCC...TGCCCAGGCTCTATTCCACATGTGCAGGTTCCAACAGCTTAACCCTATTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 90 bp | TCTCGAAGGCGGCTCTGGTGGAAGGTGTTGATGGCAGCTTCAGCCTaGTCCCCATTCAGCAGAGTCACAAAAGCTGTCCCTTTGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRLWWKVLMAASA*SPFSRVTKAVPLYL Trigger: CAAATACAAAGGGACAGCTTTTGTGACTCTGCTGAATGGGGAGCAGGCTGAAGCTGCCATCAACACCTTCCACCAGAGCCGCCTTCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACCTGTGGCCCAACTTTAAGGCATCAGAAGGCAAGGATACTGGGGCAGAAGGCTTTGTTGCCATaGTTGCTACCACTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRTCGPTLRHQKARILGQKALLP*LLPLPP Trigger: TGGAGGCAGTGGTAGCAACAATGGCAACAAAGCCTT...CTGCCCCAGTATCCTTGCCTTCTGATGCCTTAAAGTTGGGCCACAGGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | CTTAAGGCTGCAGGGTTTGGCTCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCATTTGGAAGGCTTTGTaGCCATTGTTGCTACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LKAAGFGSRSKPTGNGVAIWKAL*PLLLPL Trigger: CAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAAT...GGCCACACCATTACCTGTGGGCTTGCTCCTGGAGCCAAACCCTGCAGCCTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGCAAGCCCACAGGTAATGGTGTGGCCCCAGATACCCCACATTCCTTGACAAAAGCTGTCCCTTaGTATTTGTCCACGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSKPTGNGVAPDTPHSLTKAVP*YLSTKQ Trigger: CTGTTTCGTGGACAAATACAAAGGGACAGCTTTTGT...CAAGGAATGTGGGGTATCTGGGGCCACACCATTACCTGTGGGCTTGCTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAGATACACCCACTGGAGTGGGTTTGGGTTATCATGTTTGGGGAGGGAGTTCATTTGGAAGGCTTaGTTGCCATTGTTGCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: GVRYTHWSGFGLSCLGREFIWKA*LPLLLP Trigger: TGGTAGCAACAATGGCAACAAAGCCTTCCAAATGAA...CTCCCTCCCCAAACATGATAACCCAAACCCACTCCAGTGGGTGTATCTCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 90 bp | GAGTCACAAAAGCTGTCCCTTTGTATTTGTCCACGAAACAGTACTTaGGTTCGTAGTCGCTCAGGAGGTCATGTACTTCCTGGTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESQKLSLCICPRNST*VRSRSGGHVLPGWS Trigger: TGACCAACCAGGAAGTACATGACCTCCTGAGCGACTACGAACTCAAGTACTGTTTCGTGGACAAATACAAAGGGACAGCTTTTGTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | CAGCAGTGCAGTGGACAGGGCAGGCCCGCTGAGCAGTaGCATAGCAGGGGGCGCACCCAGGAGACCCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QQCSGQGRPAEQ*HSRGRTQETLL Trigger: AAGCAGGGTCTCCTGGGTGCGCCCCCTGCTATGCCACTGCTCAGCGGGCCTGCCCTGTCCACTGCACTGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 72 bp | GGAAGGTTGGGCCCCGGCCTGGAGGGTACCCAGAGGTaGGTCGCCCAGGATCCCAGGCTTCTTCTGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRLGPGLEGTQR*VAQDPRLLLTL Trigger: CAGGGTCAGAAGAAGCCTGGGATCCTGGGCGACTCACCTCTGGGTACCCTCCAGGCCGGGGCCCAACCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | TCCCCAAGGAGGGAGTTGGAAGGTTGGGCCCCGGCCTaGAGGGTACCCAGAGGTGAGTCGCCCAGGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPRRELEGWAPA*RVPRGESPRIP Trigger: TGGGATCCTGGGCGACTCACCTCTGGGTACCCTCCAGGCCGGGGCCCAACCTTCCAACTCCCTCCTTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | CCTGCAGACAGCTCCCCAAGGAGGGAGTTGGAAGGTTaGGCCCCGGCCTGGAGGGTACCCAGAGGTGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PADSSPRRELEG*APAWRVPRGES Trigger: CGACTCACCTCTGGGTACCCTCCAGGCCGGGGCCCAACCTTCCAACTCCCTCCTTGGGGAGCTGTCTGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 72 bp | TTTCCGGATCTCTTCCGGATCGAGCGGCGGCAACTCTaGTTCGGGCGCCCGGCGATCGACGGTCTCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPDLFRIERRQL*FGRPAIDGLGS Trigger: ACTCCCGAGACCGTCGATCGCCGGGCGCCCGAACAAGAGTTGCCGCCGCTCGATCCGGAAGAGATCCGGAAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 90 bp | TTCCAGGCGTTTCCGGATCTCTTCCGGATCGAGCGGCGGCAACTCTaGTTCGGGCGCCCGGCGATCGACGGTCTCGGGAGTTTCCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FQAFPDLFRIERRQL*FGRPAIDGLGSFRF Trigger: GAAGCGGAAACTCCCGAGACCGTCGATCGCCGGGCGCCCGAACAAGAGTTGCCGCCGCTCGATCCGGAAGAGATCCGGAAACGCCTGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 72 bp | TTGGCCACGCACAGCAGAGCATCGGTAGGCTGCAACTaGACTGACAGCTCCCGCTCTCGAAGGCGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LATHSRASVGCN*TDSSRSRRRLW Trigger: CCAGAGCCGCCTTCGAGAGCGGGAGCTGTCAGTTCAGTTGCAGCCTACCGATGCTCTGCTGTGCGTGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | TGGTCACGTCCCCCGGGAGGCCTCGGATCAGTATCTTaGGGCGGTTACGGAACTGGCGCTCAGTGTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSRPPGGLGSVS*GGYGTGAQCVP Trigger: TGGAACACACTGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGGCCTCCCGGGGGACGTGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | GCTGTCACCCAGGGCCTGGCCATCTGCCCGTTCTTGTaGTGCCTCTGCCATCTCTGCTGTCTCGTACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVTQGLAICPFL*CLCHLCCLVLQ Trigger: CTGGAGTACGAGACAGCAGAGATGGCAGAGGCAGCACAAGAACGGGCAGATGGCCAGGCCCTGGGTGACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | GGCAGGAGTCCCTTGCCTCGATTAAGAGCCGTGGCCTaGGCAGCAATGAGTGCTGCTAGCATGCTGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRSPLPRLRAVA*AAMSAASMLRP Trigger: TGGCCGCAGCATGCTAGCAGCACTCATTGCTGCCCAGGCCACGGCTCTTAATCGAGGCAAGGGACTCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | AGGGCCCAGGCCCAGGAGCCCTTCACTGGAGCCCATTaGAGAGGAACCAACAGCCTTGTTCAGGTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAQAQEPFTGAH*RGTNSLVQVAL Trigger: CAGAGCCACCTGAACAAGGCTGTTGGTTCCTCTCCAATGGGCTCCAGTGAAGGGCTCCTGGGCCTGGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 72 bp | TTGGTCACGTCCCCCGGGAGGCCTCGGATCAGTATCTaGCGGCGGTTACGGAACTGGCGCTCAGTGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVTSPGRPRISI*RRLRNWRSVCS Trigger: GGAACACACTGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGGCCTCCCGGGGGACGTGACCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 90 bp | ACTTCCTGGTTGGTCACGTCCCCCGGGAGGCCTCGGATCAGTATCTaGCGGCGGTTACGGAACTGGCGCTCAGTGTGTTCCAGGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSWLVTSPGRPRISI*RRLRNWRSVCSRRF Trigger: GAAACGCCTGGAACACACTGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGGCCTCCCGGGGGACGTGACCAACCAGGAAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 90 bp | CCCAGGAGCCCTTCACTGGAGCCCATTGGAGAGGAACCAACAGCCTaGTTCAGGTGGCTCTGCTTGAGGCCAGCCTGTAGGCCACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRSPSLEPIGEEPTA*FRWLCLRPACRPLV Trigger: CACCAGTGGCCTACAGGCTGGCCTCAAGCAGAGCCACCTGAACAAGGCTGTTGGTTCCTCTCCAATGGGCTCCAGTGAAGGGCTCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 72 bp | CACGCACAGCAGAGCATCGGTAGGCTGCAACTGAACTaGCAGCTCCCGCTCTCGAAGGCGGCTCTGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HAQQSIGRLQLN*QLPLSKAALVE Trigger: TTCCACCAGAGCCGCCTTCGAGAGCGGGAGCTGTCAGTTCAGTTGCAGCCTACCGATGCTCTGCTGTGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | TCCAGTGCACATACAGTGTGCGTGGGCCCAGTGGCTTaGCCAGCAAGTCAGACTTGGCCCTGGCTGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAHTVCVGPVA*PASQTWPWLLS Trigger: ACTCAGCAGCCAGGGCCAAGTCTGACTTGCTGGGCAAGCCACTGGGCCCACGCACACTGTATGTGCACTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | CTGCCCAGCATCTGTCCAGTGCACATACAGTGTGCGTaGGCCCAGTGGCTTGCCCAGCAAGTCAGACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPSICPVHIQCA*AQWLAQQVRLG Trigger: GCCAAGTCTGACTTGCTGGGCAAGCCACTGGGCCCACGCACACTGTATGTGCACTGGACAGATGCTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 72 bp | AGCTCCCGCTCTCGAAGGCGGCTCTGGTGGAAGGTGTaGATGGCAGCTTCAGCCTGCTCCCCATTCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSRSRRRLWWKV*MAASACSPFSR Trigger: TCTGCTGAATGGGGAGCAGGCTGAAGCTGCCATCAACACCTTCCACCAGAGCCGCCTTCGAGAGCGGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | GAGCCCATTGGAGAGGAACCAACAGCCTTGTTCAGGTaGCTCTGCTTGAGGCCAGCCTGTAGGCCACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EPIGEEPTALFR*LCLRPACRPLV Trigger: CACCAGTGGCCTACAGGCTGGCCTCAAGCAGAGCCACCTGAACAAGGCTGTTGGTTCCTCTCCAATGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 90 bp | CTGGCGATGGGGCTGAGCAGGCGGGACTTCATTTGGAAGGCTTTGTaGCCATTGTTGCTACCACTGCCTCCACCAGGAACTGCAGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LAMGLSRRDFIWKAL*PLLLPLPPPGTAGL Trigger: TAGCCCTGCAGTTCCTGGTGGAGGCAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAATGAAGTCCCGCCTGCTCAGCCCCATCGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 72 bp | ACATGCCAGCTGACAGAAGGTGGGGGTATAGACCACTaGCAGAGCCCGGCGCAGGGCATCCACATCACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TCQLTEGGGIDH*QSPAQGIHITE Trigger: TTCAGTGATGTGGATGCCCTGCGCCGGGCTCTGTCAGTGGTCTATACCCCCACCTTCTGTCAGCTGGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | TGCGCTCACTGTACACTAGGAAGCAGCGCTCCAGGCTaGCAAAGGGCCGCACCAGCTCTTCAAATTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CAHCTLGSSAPG*QRAAPALQIVP Trigger: AGGCACAATTTGAAGAGCTGGTGCGGCCCTTTGGCAGCCTGGAGCGCTGCTTCCTAGTGTACAGTGAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | AGGCCTCGGATCAGTATCTTGCGGCGGTTACGGAACTaGCGCTCAGTGTGTTCCAGGCGTTTCCGGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPRISILRRLRN*RSVCSRRFRIS Trigger: AGAGATCCGGAAACGCCTGGAACACACTGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | CGCAGGGCATCCACATCACTGAAGCCAGGTGGCAGGTaGTCCACACAGAGGCATCGAGAGTGCAACAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRASTSLKPGGR*STQRHRECNNA Trigger: TGCATTGTTGCACTCTCGATGCCTCTGTGTGGACCACCTGCCACCTGGCTTCAGTGATGTGGATGCCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 72 bp | CCTTCACTGGAGCCCATTGGAGAGGAACCAACAGCCTaGTTCAGGTGGCTCTGCTTGAGGCCAGCCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLEPIGEEPTA*FRWLCLRPACR Trigger: CCTACAGGCTGGCCTCAAGCAGAGCCACCTGAACAAGGCTGTTGGTTCCTCTCCAATGGGCTCCAGTGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 90 bp | ATGGGGCTGAGCAGGCGGGACTTCATTTGGAAGGCTTTGTTGCCATaGTTGCTACCACTGCCTCCACCAGGAACTGCAGGGCTAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGLSRRDFIWKALLP*LLPLPPPGTAGLGK Trigger: CTTGCCTAGCCCTGCAGTTCCTGGTGGAGGCAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAATGAAGTCCCGCCTGCTCAGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | CGGCTCTGGTGGAAGGTGTTGATGGCAGCTTCAGCCTaGTCCCCATTCAGCAGAGTCACAAAAGCTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLWWKVLMAASA*SPFSRVTKAVP Trigger: AGGGACAGCTTTTGTGACTCTGCTGAATGGGGAGCAGGCTGAAGCTGCCATCAACACCTTCCACCAGAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | CAGAGGCATCGAGAGTGCAACAATGCAGGGGTCAGCTaGCCAGCATCTGTCCAGTGCACATACAGTGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: QRHRECNNAGVS*PASVQCTYSVR Trigger: ACGCACACTGTATGTGCACTGGACAGATGCTGGGCAGCTGACCCCTGCATTGTTGCACTCTCGATGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS GCA 72 bp | TGGAGGGATGCAGATGGGCCCAGGTTGTTCAACAGCTaGAGAAGATTTGGCTCAGGCAGGAGTCCCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WRDADGPRLFNS*RRFGSGRSPLP Trigger: AGGCAAGGGACTCCTGCCTGAGCCAAATCTTCTGCAGCTGTTGAACAACCTGGGCCCATCTGCATCCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 90 bp | AGGTTGTTCAACAGCTGCAGAAGATTTGGCTCAGGCAGGAGTCCCTaGCCTCGATTAAGAGCCGTGGCCTGGGCAGCAATGAGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLFNSCRRFGSGRSP*PRLRAVAWAAMSAA Trigger: AGCAGCACTCATTGCTGCCCAGGCCACGGCTCTTAATCGAGGCAAGGGACTCCTGCCTGAGCCAAATCTTCTGCAGCTGTTGAACAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CCA 72 bp | TTGCTGGCGATGGGGCTGAGCAGGCGGGACTTCATTTaGAAGGCTTTGTTGCCATTGTTGCTACCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLAMGLSRRDFI*KALLPLLLPLP Trigger: AGGCAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAATGAAGTCCCGCCTGCTCAGCCCCATCGCCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS CAA 72 bp | GGGCTGAGCAGGCGGGACTTCATTTGGAAGGCTTTGTaGCCATTGTTGCTACCACTGCCTCCACCAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: GLSRRDFIWKAL*PLLLPLPPPGT Trigger: AGTTCCTGGTGGAGGCAGTGGTAGCAACAATGGCAACAAAGCCTTCCAAATGAAGTCCCGCCTGCTCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||
| CDS TCA 72 bp | AAGCTGTCCCTTTGTATTTGTCCACGAAACAGTACTTaGGTTCGTAGTCGCTCAGGAGGTCATGTACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KLSLCICPRNST*VRSRSGGHVLP Trigger: AGGAAGTACATGACCTCCTGAGCGACTACGAACTCAAGTACTGTTTCGTGGACAAATACAAAGGGACAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115487.3 |
||