Pregenerated sensors for RASSF9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044921Ensembl transcript IDs: ENSMUST00000055355.6, ENSMUST00000219445.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTTGGCACAGGCCTTTAATACCTGTAATCAGAAGGCAGAGTTCTaGGGGCAGAGAGGTTCCAAGACAGCCAGGGCTACACAGGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: MLAQAFNTCNQKAEF*GQRGSKTARATQVK Trigger: CTTTACCTGTGTAGCCCTGGCTGTCTTGGAACCTCTCTGCCCGCAGAACTCTGCCTTCTGATTACAGGTATTAAAGGCCTGTGCCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CCA 90 bp | TCAAGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTTaGCAAATAGGAGGGGGAAAGAAGAGAGGAGAGAGAGGAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: SRHPGLSYLEEGRTS*QIGGGKKRGERGNV Trigger: GACATTTCCTCTCTCTCCTCTCTTCTTTCCCCCTCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CCA 90 bp | CTTCTTGAGTTTCCCTTAACATGCTTGGGGCAGCTTAAAAGTACTTaGTTATTTAAGTACCTGGGAATCCCTCTGACTGATGGGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: LLEFPLTCLGQLKST*LFKYLGIPLTDGLQ Trigger: CTGTAACCCATCAGTCAGAGGGATTCCCAGGTACTTAAATAACCAAGTACTTTTAAGCTGCCCCAAGCATGTTAAGGGAAACTCAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CCA 90 bp | TGTCTGAAAGAAAAGAGCACTTTTAAGCATGCTGGATGTAGTTACTaGGCATGTTGGCACAGGCCTTTAATACCTGTAATCAGAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CLKEKSTFKHAGCSY*ACWHRPLIPVIRRQ Trigger: CTGCCTTCTGATTACAGGTATTAAAGGCCTGTGCCAACATGCCCAGTAACTACATCCAGCATGCTTAAAAGTGCTCTTTTCTTTCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR TCA 90 bp | TACACTATGACTCCCAAAATAATGGACTTGCAACCAGCCTTGGTTTaGTTAGAGGAACTAGTGAGCATGTGCATAGTTCATGATCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: YTMTPKIMDLQPALV*LEELVSMCIVHDPG Trigger: ACCAGGATCATGAACTATGCACATGCTCACTAGTTCCTCTAATCAAACCAAGGCTGGTTGCAAGTCCATTATTTTGGGAGTCATAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR GCA 90 bp | GAAGACTGCATTCTTACAGAAGTTTTAACACTCTTTACAGGAAAATaGAGAATTGCACCTAAAGTCACCATACTCTTTATGAAGCTAGAT | + |
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Preference number: 1 (lower is better) Translates to: EDCILTEVLTLFTGK*RIAPKVTILFMKLD Trigger: ATCTAGCTTCATAAAGAGTATGGTGACTTTAGGTGCAATTCTGCATTTTCCTGTAAAGAGTGTTAAAACTTCTGTAAGAATGCAGTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CAA 90 bp | GTCAAGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTaGGCAAATAGGAGGGGGAAAGAAGAGAGGAGAGAGAGGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: VKTSWSVLLGGREDE*ANRRGKEERRERKC Trigger: ACATTTCCTCTCTCTCCTCTCTTCTTTCCCCCTCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CCA 90 bp | AGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTTGGCAAATAGGAATTGTGTATAGCACTTaGCTTTGCCTCATCTGCATC | + |
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Preference number: 2 (lower is better) Translates to: RHPGLSYLEEGRTSWQIGIVYST*LCLICI Trigger: GATGCAGATGAGGCAAAGCCAAGTGCTATACACAAT...TCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGGTTGTCAAGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGATCCACAAAGCTTCTTaGGTTTCCCTTAACATGCTT | + |
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Preference number: 2 (lower is better) Translates to: FLVVKTSWSVLLGGREDEIHKAS*VSLNML Trigger: AAGCATGTTAAGGGAAACTCAAGAAGCTTTGTGGAT...CTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCTTGACAACCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTCGTTCCTATCATTCATaGCTCATAGAAGCTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LERAINDIASGIKLVKTSRSYHS*LIEAVG Trigger: CCCCACAGCTTCTATGAGGCATGAATGATAGGAACG...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATCACATGGCCATTTCATaGTTAATCTGCCAGGCTACT | + |
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Preference number: 2 (lower is better) Translates to: YLLPNFPSRIPANIFRPDHMAIS*LICQAT Trigger: AGTAGCCTGGCAGATTAATCATGAAATGGCCATGTG...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTAATAGCTAGTGTCTACATAGTATCCGTACATCAAACAACATTTCTACTTGTTGTCAAGACATCCTaGTCTGTCTTACTTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GVIASVYIVSVHQTTFLLVVKTS*SVLLGG Trigger: TCCTCCAAGTAAGACAGACCAGGATGTCTTGACAAC...AAGTAGAAATGTTGTTTGATGTACGGATACTATGTAGACACTAGCTATTACTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATAGTTACTGGGCATGTTaGCACAGGCCTTTAATACCT | + |
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Preference number: 2 (lower is better) Translates to: YLLPNFPSRIPANIFRPDSYWAC*HRPLIP Trigger: AGGTATTAAAGGCCTGTGCCAACATGCCCAGTAACT...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACTCACGCAGTAAGTACATTTTGCAGTCTGATTATTAAAAACAACAACAACTTGGTAATACTATATTaGAAACAAGCAGTGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ETHAVSTFCSLIIKNNNNLVILY*KQAVVA Trigger: GGCCACCACTGCTTGTTTTCAATATAGTATTACCAA...GTTGTTGTTGTTTTTAATAATCAGACTGCAAAATGTACTTACTGCGTGAGTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTGAAAACAAGCAGTGGTaGCCACTAGTTTTTATTAAC | + |
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Preference number: 2 (lower is better) Translates to: LERAINDIASGIKLVKTSENKQW*PLVFIN Trigger: GTTAATAAAAACTAGTGGCCACCACTGCTTGTTTTC...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CAA 90 bp | GATCTTGCTTCATGCTTGCAGTATGAATATTTTGATGAACAAACGTaGAGAACTAATTTTACGTTCCTATCATTCATGCCTCATAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: DLASCLQYEYFDEQT*RTNFTFLSFMPHRS Trigger: GCTTCTATGAGGCATGAATGATAGGAACGTAAAATTAGTTCTCAACGTTTGTTCATCAAAATATTCATACTGCAAGCATGAAGCAAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTAATAGCTAGTGTCTACATAGTATCCGTACATCAAACAACATTTCTACTTCATGATAATTGTCAGTaGAGACAGACTCCAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: GVIASVYIVSVHQTTFLLHDNCQ*RQTPNN Trigger: ATTGTTTGGAGTCTGTCTTCACTGACAATTATCATG...AAGTAGAAATGTTGTTTGATGTACGGATACTATGTAGACACTAGCTATTACTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATCAGCTTAAAAGTACTTaGTTATTTAAGTACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YLLPNFPSRIPANIFRPDQLKST*LFKYLG Trigger: TCCCAGGTACTTAAATAACCAAGTACTTTTAAGCTG...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR GCA 72 bp | CAGGCCTTTAATACCTGTAATCAGAAGGCAGAGTTCTaGGGGCAGAGAGGTTCCAAGACAGCCAGGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: QAFNTCNQKAEF*GQRGSKTARAT Trigger: TGTAGCCCTGGCTGTCTTGGAACCTCTCTGCCCGCAGAACTCTGCCTTCTGATTACAGGTATTAAAGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CCA 72 bp | ACTTTTAAGCATGCTGGATGTAGTTACTGGGCATGTTaGCACAGGCCTTTAATACCTGTAATCAGAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TFKHAGCSYWAC*HRPLIPVIRRQ Trigger: CTGCCTTCTGATTACAGGTATTAAAGGCCTGTGCCAACATGCCCAGTAACTACATCCAGCATGCTTAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR TCA 72 bp | ACTCCCAAAATAATGGACTTGCAACCAGCCTTGGTTTaGTTAGAGGAACTAGTGAGCATGTGCATAGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: TPKIMDLQPALV*LEELVSMCIVH Trigger: ATGAACTATGCACATGCTCACTAGTTCCTCTAATCAAACCAAGGCTGGTTGCAAGTCCATTATTTTGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CCA 72 bp | TTTCCCTTAACATGCTTGGGGCAGCTTAAAAGTACTTaGTTATTTAAGTACCTGGGAATCCCTCTGACTGAT | + |
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Preference number: 3 (lower is better) Translates to: FPLTCLGQLKST*LFKYLGIPLTD Trigger: ATCAGTCAGAGGGATTCCCAGGTACTTAAATAACCAAGTACTTTTAAGCTGCCCCAAGCATGTTAAGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTGCAACCAGCCTTGGTTaGATTAGAGGAACTAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: LERAINDIASGIKLVKTSATSLG*IRGTSE Trigger: CTCACTAGTTCCTCTAATCAAACCAAGGCTGGTTGC...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATCTGGATGGAACACAGTaGTCTGAAAGAAAAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: YLLPNFPSRIPANIFRPDLDGTQ*SERKEH Trigger: GTGCTCTTTTCTTTCAGACAACTGTGTTCCATCCAG...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CAA 90 bp | GACAATTTAGCATGCACTTTAGTGATCTGTTGGGTTATTATTCAGGAGAGCTTTAAACTGAGAAACATGTaGATCTTGCTTCATGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: DNLACTLVICWVIIQESFKLRNM*ILLHAC Trigger: GCAAGCATGAAGCAAGATCAACATGTTTCTCAGTTT...AAAGCTCTCCTGAATAATAACCCAACAGATCACTAAAGTGCATGCTAAATTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR GCA 72 bp | AAACAATCCACAAAGCTTCTTGAGTTTCCCTTAACATaGTTGGGGCAGCTTAAAAGTACTTGGTTATTTAAG | + |
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Preference number: 3 (lower is better) Translates to: KQSTKLLEFPLT*LGQLKSTWLFK Trigger: CTTAAATAACCAAGTACTTTTAAGCTGCCCCAAGCATGTTAAGGGAAACTCAAGAAGCTTTGTGGATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR GCA 72 bp | TATTTAACTATATTAGAGCCTACCATGGAAACTAATTaGCATGTGTTTCAATGTAATGAGCGAGGGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: YLTILEPTMETN*HVFQCNERGHR Trigger: TCTGTGCCCTCGCTCATTACATTGAAACACATGGCAATTAGTTTCCATGGTAGGCTCTAATATAGTTAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATGTTGGTAATACTATATaGAAAACAAGCAGTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: YLLPNFPSRIPANIFRPDVGNTI*KTSSGG Trigger: GCCACCACTGCTTGTTTTCAATATAGTATTACCAAC...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTTCAATCCTCATTAGATaGTGTCTGCTTTATGTAACC | + |
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Preference number: 3 (lower is better) Translates to: LERAINDIASGIKLVKTSSILIR*CLLYVT Trigger: GGTTACATAAAGCAGACACAATCTAATGAGGATTGA...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR-3UTR CAA 90 bp | AGTATCCGTACATCAAACAACATTTCTACTTCTTGTATCCTGACATGTGTGAAAAGAAACATGTTGATCTaGCTTCATGCTTGCAGTATG | + |
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Preference number: 3 (lower is better) Translates to: SIRTSNNISTSCILTCVKRNMLI*LHACSM Trigger: CATACTGCAAGCATGAAGCAAGATCAACATGTTTCT...TTTCACACATGTCAGGATACAAGAAGTAGAAATGTTGTTTGATGTACGGATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR TCA 72 bp | GCATACCAATATTCAGTTAACAACAAAACGATGAAATaGATGTTTTTGGTTGTCAAGACATCCTGGTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: AYQYSVNNKTMK*MFLVVKTSWSV Trigger: GACAGACCAGGATGTCTTGACAACCAAAAACATTCATTTCATCGTTTTGTTGTTAACTGAATATTGGTATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR TCA 72 bp | CATGCTTGCAGTATGAATATTTTGATGAACAAACGTTaGGAACTAATTTTACGTTCCTATCATTCATGCCTC | + |
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Preference number: 3 (lower is better) Translates to: HACSMNILMNKR*ELILRSYHSCL Trigger: GAGGCATGAATGATAGGAACGTAAAATTAGTTCTCAACGTTTGTTCATCAAAATATTCATACTGCAAGCATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR GCA 72 bp | GTTACAGTATATGAGAATAAATATTCAGTTCTCCTCTaGATATTCCCCGAGAAGAGAATACTAATATGTCCA | + |
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Preference number: 3 (lower is better) Translates to: VTVYENKYSVLL*IFPEKRILICP Trigger: TGGACATATTAGTATTCTCTTCTCGGGGAATATGCAGAGGAGAACTGAATATTTATTCTCATATACTGTAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | TTTTTGGTTGTCAAGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGAGGAAGGGCTCGCTCTaGGCCCCTCCACTTTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: FLVVKTSWSVLLGGREDERKGSL*APPLFY Trigger: GTAGAAAAGTGGAGGGGCTCAGAGCGAGCCCTTCCT...CTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCTTGACAACCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | CACTTGGCTTTGCCTCATCTGCATCCAAAGCAATCCACTGTCAGGAATTATACAAGCGGTCCGCCACAGTaGAACTGGGAGGAAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: HLALPHLHPKQSTVRNYTSGPPQ*NWEEGI Trigger: GATGCCTTCCTCCCAGTTCCACTGTGGCGGACCGCT...TGTATAATTCCTGACAGTGGATTGCTTTGGATGCAGATGAGGCAAAGCCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | CACTTGGCTTTGCCTCATCTGCATCCAAAGCAATCCACTGTCAGGAATTATACACTTCAATCCCATCAATaGCTGCGCCCTTCACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HLALPHLHPKQSTVRNYTLQSHQ*LRPSPL Trigger: GAGAGGTGAAGGGCGCAGGCATTGATGGGATTGAAG...TGTATAATTCCTGACAGTGGATTGCTTTGGATGCAGATGAGGCAAAGCCAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | AGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTTGGCAAATAGGATTTCATGTAATTCGCTaGGCTGAGCTCCCAAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RHPGLSYLEEGRTSWQIGFHVIR*AELPRF Trigger: AAACCTTGGGAGCTCAGCCCAGCGAATTACATGAAA...TCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | AGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTTGGCAAATAGGATGGTTGATCTCAGCTTaGATGTCTAACTTCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RHPGLSYLEEGRTSWQIGWLISA*MSNFCS Trigger: AGAGCAGAAGTTAGACATTCAAGCTGAGATCAACCA...TCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTAGCTGTTCCTCCAGCTaGGCCATCCCCTCACTGTCG | + |
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Preference number: 4 (lower is better) Translates to: LERAINDIASGIKLVKTSSCSSS*AIPSLS Trigger: CGACAGTGAGGGGATGGCGCAGCTGGAGGAACAGCT...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTGAGGGGTCTCCCCATTaGTGCTGGGAGCCTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LERAINDIASGIKLVKTSEGSPH*CWEPQL Trigger: AAGCTGAGGCTCCCAGCAGCAATGGGGAGACCCCTC...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | AGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTTGGCAAATAGGAACAATCTTCTCGTCCTaGCAAACCCAAACCACAATT | + |
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Preference number: 4 (lower is better) Translates to: RHPGLSYLEEGRTSWQIGTIFSS*QTQTTI Trigger: AATTGTGGTTTGGGTTTGCCAGGACGAGAAGATTGT...TCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATGGGTCTCCCCATTGCTaGTGGGAGCCTCAGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YLLPNFPSRIPANIFRPDGSPHC*WEPQLP Trigger: AGGAAGCTGAGGCTCCCAGCAGCAATGGGGAGACCC...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | TTGGAAAGAGCCATTAACGACATTGCATCTGGAATAAAGCTGGTAAAAACATCTAATCCCATCAATGCCTaGGCCCTTCACCTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LERAINDIASGIKLVKTSNPINA*ALHLSL Trigger: GAGAGAGAGGTGAAGGGCGCAGGCATTGATGGGATT...AGATGTTTTTACCAGCTTTATTCCAGATGCAATGTCGTTAATGGCTCTTTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | GAGACTCACGCAGTAAGTACATTTTGCAGTCTGATTATTAAAAACAACAACAACCGATGCAGTAGTCACTaGCCTTGCCCAACAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: ETHAVSTFCSLIIKNNNNRCSSH*PCPTEI Trigger: GATTTCTGTTGGGCAAGGCCAGTGACTACTGCATCG...GTTGTTGTTGTTTTTAATAATCAGACTGCAAAATGTACTTACTGCGTGAGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATCAGAGAGCTTATCGATaGGGGCTCTGTAGTATTGCA | + |
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Preference number: 4 (lower is better) Translates to: YLLPNFPSRIPANIFRPDQRAYR*GLCSIA Trigger: TGCAATACTACAGAGCCCTCATCGATAAGCTCTCTG...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATGTCGTTTCAGAGTCCTaGCTGTGGTTTGAACTGATG | + |
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Preference number: 4 (lower is better) Translates to: YLLPNFPSRIPANIFRPDVVSES*LWFELM Trigger: CATCAGTTCAAACCACAGTCAGGACTCTGAAACGAC...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | GAGGAACTAGTGAGCATGTGCATAGTTCATGATCCTGGTAGAATTGCTCAGGAAATCCATGTCTTTAGTTaGAGATCTGTTTTTATGTCG | + |
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Preference number: 4 (lower is better) Translates to: EELVSMCIVHDPGRIAQEIHVFS*RSVFMS Trigger: CGACATAAAAACAGATCTCCAACTAAAGACATGGAT...TTCCTGAGCAATTCTACCAGGATCATGAACTATGCACATGCTCACTAGTTCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | GAGACTCACGCAGTAAGTACATTTTGCAGTCTGATTATTAAAAACAACAACAACCCTCTAGAGTCTGGTTaGTCTCAGCTTGAATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ETHAVSTFCSLIIKNNNNPLESG*SQLECL Trigger: TAGACATTCAAGCTGAGATCAACCAGACTCTAGAGG...GTTGTTGTTGTTTTTAATAATCAGACTGCAAAATGTACTTACTGCGTGAGTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | AGTATCCGTACATCAAACAACATTTCTACTTCTTGTATCCTGACATGTGTGAAATCCCTTGCTTTCATCTaGAGCAGTGAGTCACTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SIRTSNNISTSCILTCVKSLAFI*SSESLY Trigger: ATACAGTGACTCACTGCTTCAGATGAAAGCAAGGGA...TTTCACACATGTCAGGATACAAGAAGTAGAAATGTTGTTTGATGTACGGATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | GGAGTAATAGCTAGTGTCTACATAGTATCCGTACATCAAACAACATTTCTACTTAGTAGTCACTGGCCTTaGCCAACAGAAATCGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GVIASVYIVSVHQTTFLLSSHWP*PTEIAF Trigger: AAAAGCGATTTCTGTTGGGCAAGGCCAGTGACTACT...AAGTAGAAATGTTGTTTGATGTACGGATACTATGTAGACACTAGCTATTACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | AGTATCCGTACATCAAACAACATTTCTACTTCTTGTATCCTGACATGTGTGAAAAAACAAACTGCATGTTaGGCTGTTCATCTCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SIRTSNNISTSCILTCVKKQTAC*AVHLPK Trigger: CTTGGGGAGATGAACAGCCCAACATGCAGTTTGTTT...TTTCACACATGTCAGGATACAAGAAGTAGAAATGTTGTTTGATGTACGGATACT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | GGAGTAATAGCTAGTGTCTACATAGTATCCGTACATCAAACAACATTTCTACTTTCTTTGTTGCTAATGTaGAGTGAGCTGAACTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVIASVYIVSVHQTTFLLSLLLM*SELNSL Trigger: CAAGGAGTTCAGCTCACTTCACATTAGCAACAAAGA...AAGTAGAAATGTTGTTTGATGTACGGATACTATGTAGACACTAGCTATTACTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CCA 90 bp | GGAGTAATAGCTAGTGTCTACATAGTATCCGTACATCAAACAACATTTCTACTTGCTTTTCTCCAAATGTaGCTTCGTGTTCCTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVIASVYIVSVHQTTFLLAFLQM*LRVPQV Trigger: TACTTGAGGAACACGAAGCCACATTTGGAGAAAAGC...AAGTAGAAATGTTGTTTGATGTACGGATACTATGTAGACACTAGCTATTACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCTCCCTAACTTTCCAAGTAGAATTCCTGCTAATATTTTTAGGCCTGATTCCGGAAGGTTTTCCTaGCGATTCGTTTTTGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: YLLPNFPSRIPANIFRPDSGRFS*RFVFVY Trigger: ATAAACAAAAACGAATCGTCAGGAAAACCTTCCGGA...ATCAGGCCTAAAAATATTAGCAGGAATTCTACTTGGAAAGTTAGGGAGCAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR GCA 90 bp | GACAATTTAGCATGCACTTTAGTGATCTGTTGGGTTATTATTCAGGAGAGCTTTTTAACCAAAACAAACTaGATGTTGGGCTGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLACTLVICWVIIQESFLTKTN*MLGCSS Trigger: AGATGAACAGCCCAACATGCAGTTTGTTTTGGTTAA...AAAGCTCTCCTGAATAATAACCCAACAGATCACTAAAGTGCATGCTAAATTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR TCA 90 bp | GAGACTCACGCAGTAAGTACATTTTGCAGTCTGATTATTAAAAACAACAACAACTTTCATCTGAAGCAGTaGGTCACTGTATTTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETHAVSTFCSLIIKNNNNFHLKQ*VTVFNL Trigger: GAGATTAAATACAGTGACTCACTGCTTCAGATGAAA...GTTGTTGTTGTTTTTAATAATCAGACTGCAAAATGTACTTACTGCGTGAGTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| 3UTR CAA 72 bp | ATTTGTCGACAATTTAGCATGCACTTTAGTGATCTGTaGGGTTATTATTCAGGAGAGCTTTCCTTTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: ICRQFSMHFSDL*GYYSGELSFNK Trigger: TTTGTTAAAGGAAAGCTCTCCTGAATAATAACCCAACAGATCACTAAAGTGCATGCTAAATTGTCGACAAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS TCA 90 bp | CTTCCACAGCTTAAGGATCCTGGTCAGAGGAGGAAGGGCTCGCTCTaGGCCCCTCCACTTTTCTACGATGCAGTAGTCACTGGCCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LPQLKDPGQRRKGSL*APPLFYDAVVTGLA Trigger: GGCAAGGCCAGTGACTACTGCATCGTAGAAAAGTGGAGGGGCTCAGAGCGAGCCCTTCCTCCTCTGACCAGGATCCTTAAGCTGTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 90 bp | CTGCGCCCTTCACCTCTCTCTCGATCTCAGCAGAGAGCTTATCGATaGGGGCTCTGTAGTATTGCAGCTGTTCCTCCAGCTGCGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRPSPLSRSQQRAYR*GLCSIAAVPPAAPS Trigger: GGATGGCGCAGCTGGAGGAACAGCTGCAATACTACAGAGCCCTCATCGATAAGCTCTCTGCTGAGATCGAGAGAGAGGTGAAGGGCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS GCA 90 bp | CCAGCTCACAGGCAGCTGCCCCCTCCATGTCTTCAATCCCATCAATaGCTGCGCCCTTCACCTCTCTCTCGATCTCAGCAGAGAGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PAHRQLPPPCLQSHQ*LRPSPLSRSQQRAY Trigger: ATAAGCTCTCTGCTGAGATCGAGAGAGAGGTGAAGGGCGCAGGCATTGATGGGATTGAAGACATGGAGGGGGCAGCTGCCTGTGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 90 bp | GCTGCGCCATCCCCTCACTGTCGTTCAGGTCCTCTAGAGTCTGGTTaGTCTCAGCTTGAATGTCTAACTTCTGCTCTTCATCACTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: AAPSPHCRSGPLESG*SQLECLTSALHHLT Trigger: GGTTAAGTGATGAAGAGCAGAAGTTAGACATTCAAGCTGAGATCAACCAGACTCTAGAGGACCTGAACGACAGTGAGGGGATGGCGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 90 bp | GAGCTGAACTCCTTGGCTAGGAGTTCGTACTCCCTTGCTTTCATCTaGAGCAGTGAGTCACTGTATTTAATCTCTCTCTGGATGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ELNSLARSSYSLAFI*SSESLYLISLWMPL Trigger: GAGTGGCATCCAGAGAGAGATTAAATACAGTGACTCACTGCTTCAGATGAAAGCAAGGGAGTACGAACTCCTAGCCAAGGAGTTCAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 90 bp | CCAGTGTCTGAATCCGTGTCATTTGTATATATGTTAAACACCCTTTaGGTTAATGGAGGGGTCTCCCCATTGCTGCTGGGAGCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVSESVSFVYMLNTL*VNGGVSPLLLGASA Trigger: AGCTGAGGCTCCCAGCAGCAATGGGGAGACCCCTCCATTAACTCAAAGGGTGTTTAACATATATACAAATGACACGGATTCAGACACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | AGTATCCGTACATCAAACAACATTTCTACTTCTTGTATCCTGACATGTGTGAAAGGAGGGGTCTCCCCATaGCTGCTGGGAGCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIRTSNNISTSCILTCVKGGVSP*LLGASA Trigger: AGCTGAGGCTCCCAGCAGCAATGGGGAGACCCCTCC...TTTCACACATGTCAGGATACAAGAAGTAGAAATGTTGTTTGATGTACGGATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS CCA 90 bp | ATGGAGGTGGTGCGTTTAGTTAATCCGCAGACAATCTTCTCGTCCTaGCAAACCCAAACCACAATTTCCTTCTCTTCAGGATCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MEVVRLVNPQTIFSS*QTQTTISFSSGSMS Trigger: AGACATGGATCCTGAAGAGAAGGAAATTGTGGTTTGGGTTTGCCAGGACGAGAAGATTGTCTGCGGATTAACTAAACGCACCACCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS CCA 90 bp | AATCGCTTTTCTCCAAATGTGGCTTCGTGTTCCTCAAGTAGAGCCTaGATAACATCGATGGAGGTGGTGCGTTTAGTTAATCCGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: NRFSPNVASCSSSRA*ITSMEVVRLVNPQT Trigger: TGTCTGCGGATTAACTAAACGCACCACCTCCATCGATGTTATCCAGGCTCTACTTGAGGAACACGAAGCCACATTTGGAGAAAAGCGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | GAGGAACTAGTGAGCATGTGCATAGTTCATGATCCTGGTAGAATTGCTCAGGAAGGAGTTCGTACTCCCTaGCTTTCATCTGAAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EELVSMCIVHDPGRIAQEGVRTP*LSSEAV Trigger: CACTGCTTCAGATGAAAGCAAGGGAGTACGAACTCC...TTCCTGAGCAATTCTACCAGGATCATGAACTATGCACATGCTCACTAGTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | AGACATCCTGGTCTGTCTTACTTGGAGGAAGGGAGGACGAGTTGGCAAATAGGAACTAAACACTCCATATaGTCTCGATCATGGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RHPGLSYLEEGRTSWQIGTKHSI*SRSWEL Trigger: AAGTTCCCATGATCGAGACAATATGGAGTGTTTAGT...TCCTATTTGCCAACTCGTCCTCCCTTCCTCCAAGTAAGACAGACCAGGATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | GAGGAACTAGTGAGCATGTGCATAGTTCATGATCCTGGTAGAATTGCTCAGGAATTTCATTCTCTGCACTaGCTGGTGAATCGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EELVSMCIVHDPGRIAQEFHSLH*LVNRVV Trigger: GACCACACGATTCACCAGCAAGTGCAGAGAATGAAA...TTCCTGAGCAATTCTACCAGGATCATGAACTATGCACATGCTCACTAGTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS TCA 90 bp | CCCTCACTGTCGTTCAGGTCCTCTAGAGTCTGGTTGATCTCAGCTTaGATGTCTAACTTCTGCTCTTCATCACTTAACCTAGGCATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLSFRSSRVWLISA*MSNFCSSSLNLGIK Trigger: TTTAATGCCTAGGTTAAGTGATGAAGAGCAGAAGTTAGACATTCAAGCTGAGATCAACCAGACTCTAGAGGACCTGAACGACAGTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS CCA 90 bp | AACCCAAACCACAATTTCCTTCTCTTCAGGATCCATGTCTTTAGTTaGAGATCCCGGAACCATTTCCTGCTTCCTTTTCTGGTTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NPNHNFLLFRIHVFS*RSRNHFLLPFLVGN Trigger: GTTTCCAACCAGAAAAGGAAGCAGGAAATGGTTCCGGGATCTCCAACTAAAGACATGGATCCTGAAGAGAAGGAAATTGTGGTTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055355.6 |
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| CDS TCA 90 bp | AGCAGTGAGTCACTGTATTTAATCTCTCTCTGGATGCCACTCAAGTaGGAGTGGATTGTCAAACCAGCTTTCATACTTGTCTCCAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: SSESLYLISLWMPLK*EWIVKPAFILVSKS Trigger: CGATTTGGAGACAAGTATGAAAGCTGGTTTGACAATCCACTCTCACTTGAGTGGCATCCAGAGAGAGATTAAATACAGTGACTCACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | AGTATCCGTACATCAAACAACATTTCTACTTCTTGTATCCTGACATGTGTGAAAGAGGGCTCTGTAGTATaGCAGCTGTTCCTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SIRTSNNISTSCILTCVKEGSVV*QLFLQL Trigger: CAGCTGGAGGAACAGCTGCAATACTACAGAGCCCTC...TTTCACACATGTCAGGATACAAGAAGTAGAAATGTTGTTTGATGTACGGATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | GAGGAACTAGTGAGCATGTGCATAGTTCATGATCCTGGTAGAATTGCTCAGGAATCAAGTGAGAGTGGATaGTCAAACCAGCTTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: EELVSMCIVHDPGRIAQESSESG*SNQLSY Trigger: GTATGAAAGCTGGTTTGACAATCCACTCTCACTTGA...TTCCTGAGCAATTCTACCAGGATCATGAACTATGCACATGCTCACTAGTTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS-3UTR CAA 90 bp | GGAGTAATAGCTAGTGTCTACATAGTATCCGTACATCAAACAACATTTCTACTTGTGTCCTGCCTAATTTaGGCCAGTTTCCGGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVIASVYIVSVHQTTFLLVSCLI*ASFRKV Trigger: AACCTTCCGGAAACTGGCCAAAATTAGGCAGGACAC...AAGTAGAAATGTTGTTTGATGTACGGATACTATGTAGACACTAGCTATTACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219445.2 |
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| CDS GCA 72 bp | AGGCAGCTGCCCCCTCCATGTCTTCAATCCCATCAATaGCTGCGCCCTTCACCTCTCTCTCGATCTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RQLPPPCLQSHQ*LRPSPLSRSQQ Trigger: CTGCTGAGATCGAGAGAGAGGTGAAGGGCGCAGGCATTGATGGGATTGAAGACATGGAGGGGGCAGCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | CTTAAGGATCCTGGTCAGAGGAGGAAGGGCTCGCTCTaGGCCCCTCCACTTTTCTACGATGCAGTAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LKDPGQRRKGSL*APPLFYDAVVT Trigger: AGTGACTACTGCATCGTAGAAAAGTGGAGGGGCTCAGAGCGAGCCCTTCCTCCTCTGACCAGGATCCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | TCACCTCTCTCTCGATCTCAGCAGAGAGCTTATCGATaGGGGCTCTGTAGTATTGCAGCTGTTCCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPLSRSQQRAYR*GLCSIAAVPPA Trigger: AGCTGGAGGAACAGCTGCAATACTACAGAGCCCTCATCGATAAGCTCTCTGCTGAGATCGAGAGAGAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | AGCAGGAGCACATCTCCCAGAGTCGTTTCAGAGTCCTaGCTGTGGTTTGAACTGATGCCAGTGTCTGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSTSPRVVSES*LWFELMPVSES Trigger: GGATTCAGACACTGGCATCAGTTCAAACCACAGTCAGGACTCTGAAACGACTCTGGGAGATGTGCTCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS GCA 72 bp | CCCTCCACTTTTCTACGATGCAGTAGTCACTGGCCTTaGCCAACAGAAATCGCTTTTCTCCAAATGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSTFLRCSSHWP*PTEIAFLQMWL Trigger: AAGCCACATTTGGAGAAAAGCGATTTCTGTTGGGCAAGGCCAGTGACTACTGCATCGTAGAAAAGTGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | TCCCCTCACTGTCGTTCAGGTCCTCTAGAGTCTGGTTaGTCTCAGCTTGAATGTCTAACTTCTGCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPHCRSGPLESG*SQLECLTSALH Trigger: ATGAAGAGCAGAAGTTAGACATTCAAGCTGAGATCAACCAGACTCTAGAGGACCTGAACGACAGTGAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS GCA 72 bp | CACTCCATATTGTCTCGATCATGGGAACTTGTGTCCTaGCTAATTTTGGCCAGTTTCCGGAAGGTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSILSRSWELVS*LILASFRKVFL Trigger: CAGGAAAACCTTCCGGAAACTGGCCAAAATTAGGCAGGACACAAGTTCCCATGATCGAGACAATATGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS CAA 72 bp | TTGTCTCGATCATGGGAACTTGTGTCCTGCCTAATTTaGGCCAGTTTCCGGAAGGTTTTCCTGACGATTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSRSWELVSCLI*ASFRKVFLTIR Trigger: ACGAATCGTCAGGAAAACCTTCCGGAAACTGGCCAAAATTAGGCAGGACACAAGTTCCCATGATCGAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | TCCTTGGCTAGGAGTTCGTACTCCCTTGCTTTCATCTaGAGCAGTGAGTCACTGTATTTAATCTCTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLARSSYSLAFI*SSESLYLISLW Trigger: CCAGAGAGAGATTAAATACAGTGACTCACTGCTTCAGATGAAAGCAAGGGAGTACGAACTCCTAGCCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS CCA 72 bp | GTGCGTTTAGTTAATCCGCAGACAATCTTCTCGTCCTaGCAAACCCAAACCACAATTTCCTTCTCTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VRLVNPQTIFSS*QTQTTISFSSG Trigger: TCCTGAAGAGAAGGAAATTGTGGTTTGGGTTTGCCAGGACGAGAAGATTGTCTGCGGATTAACTAAACGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS CCA 72 bp | TCTCCAAATGTGGCTTCGTGTTCCTCAAGTAGAGCCTaGATAACATCGATGGAGGTGGTGCGTTTAGTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SPNVASCSSSRA*ITSMEVVRLVN Trigger: ATTAACTAAACGCACCACCTCCATCGATGTTATCCAGGCTCTACTTGAGGAACACGAAGCCACATTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | GAATCCGTGTCATTTGTATATATGTTAAACACCCTTTaGGTTAATGGAGGGGTCTCCCCATTGCTGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ESVSFVYMLNTL*VNGGVSPLLLG Trigger: TCCCAGCAGCAATGGGGAGACCCCTCCATTAACTCAAAGGGTGTTTAACATATATACAAATGACACGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | CCAGAGTCGTTTCAGAGTCCTGACTGTGGTTTGAACTaGTGCCAGTGTCTGAATCCGTGTCATTTGTATATA | + |
|
Preference number: 6 (lower is better) Translates to: PESFQSPDCGLN*CQCLNPCHLYI Trigger: TATATACAAATGACACGGATTCAGACACTGGCATCAGTTCAAACCACAGTCAGGACTCTGAAACGACTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS CCA 72 bp | CACAATTTCCTTCTCTTCAGGATCCATGTCTTTAGTTaGAGATCCCGGAACCATTTCCTGCTTCCTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HNFLLFRIHVFS*RSRNHFLLPFL Trigger: CAGAAAAGGAAGCAGGAAATGGTTCCGGGATCTCCAACTAAAGACATGGATCCTGAAGAGAAGGAAATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055355.6 |
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| CDS CAA 90 bp | CACTCCATATTGTCTCGATCATGGGAACTTGTGTCCTGCCTAATTTaGGCCAGTTTCCGGAAGGTTTTCCTGACGATTCGTTTTTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HSILSRSWELVSCLI*ASFRKVFLTIRFCL Trigger: TAAACAAAAACGAATCGTCAGGAAAACCTTCCGGAAACTGGCCAAAATTAGGCAGGACACAAGTTCCCATGATCGAGACAATATGGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | TCGTTCAGGTCCTCTAGAGTCTGGTTGATCTCAGCTTaGATGTCTAACTTCTGCTCTTCATCACTTAACCTA | + |
|
Preference number: 6 (lower is better) Translates to: SFRSSRVWLISA*MSNFCSSSLNL Trigger: TAGGTTAAGTGATGAAGAGCAGAAGTTAGACATTCAAGCTGAGATCAACCAGACTCTAGAGGACCTGAACGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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| CDS TCA 72 bp | TCACTGTATTTAATCTCTCTCTGGATGCCACTCAAGTaGGAGTGGATTGTCAAACCAGCTTTCATACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLYLISLWMPLK*EWIVKPAFILV Trigger: GACAAGTATGAAAGCTGGTTTGACAATCCACTCTCACTTGAGTGGCATCCAGAGAGAGATTAAATACAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055355.6 ENSMUST00000219445.2 |
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