Pregenerated sensors for RASSF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030259Ensembl transcript IDs: ENSMUST00000032388.5, ENSMUST00000058538.7, ENSMUST00000111704.8, ENSMUST00000140966.2
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCACCCCACCAGTCGGGGAGGCCGGGAGGCCGGGAGAGTAGCTaGCAGCTTCCAGGTTCAGAGGTGACGGTGGTGGAGAGCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: AAPHQSGRPGGRESS*QLPGSEVTVVESQD Trigger: GTCCTGGCTCTCCACCACCGTCACCTCTGAACCTGGAAGCTGCCAGCTACTCTCCCGGCCTCCCGGCCTCCCCGACTGGTGGGGTGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | TGTTCAGCATCAGTGCACAGGGCATGGCTCCGAGTGGTGTGTGGTTaGGAGAGGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: CSASVHRAWLRVVCG*ERIRRGNRPSVQLA Trigger: TGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTGTGCACTGATGCTGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR TCA 90 bp | TCAGTCTGGATGGTGGAGCGCCCCAGGAGGCTCCGAAGCTGTACATaGGCAAAGCTCAGATGGAGTCTGCCAACATGCACACAGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SVWMVERPRRLRSCT*AKLRWSLPTCTQSE Trigger: CTCTGACTGTGTGCATGTTGGCAGACTCCATCTGAGCTTTGCTCATGTACAGCTTCGGAGCCTCCTGGGGCGCTCCACCATCCAGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | CAGGGCATGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTaGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTA | + |
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Preference number: 1 (lower is better) Translates to: QGMAPSGVWLGEDPA*EQTLCSVGTNWRIL Trigger: TAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR GCA 90 bp | CATGTCAATACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTaGACAGGGCATGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCC | + |
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Preference number: 1 (lower is better) Translates to: HVNTAKSERLHVQHQ*TGHGSEWCVVGRGS Trigger: GGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTGTGCACTGATGCTGAACATGGAGCCTTTCACTCTTCGCAGTATTGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR GCA 90 bp | CTCAGTAAGCCAGACAGTTCACAACTGAGTGTGTCAGGGGATCTGTaGAATTCTCTTTCTTTCCACAGGGTCTCACACCAGACCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LSKPDSSQLSVSGDL*NSLSFHRVSHQTPG Trigger: GCCTGGGGTCTGGTGTGAGACCCTGTGGAAAGAAAGAGAATTGCACAGATCCCCTGACACACTCAGTTGTGAACTGTCTGGCTTACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | GAGGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTaGAGGATTTTACTGTCCATGGTACCTTTGCTGGATCCTTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: EDPAWEQTLCSVGTN*RILLSMVPLLDPFP Trigger: TGGGAAAGGATCCAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | CAGCATTCTCGGCTTCATCGAACATTCATCAAACCAGAAGTAAGTTaGGTGTGGTCACCCACCTCAGCTCACCTTGAGTGTGGTTGCGGC | + |
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Preference number: 1 (lower is better) Translates to: QHSRLHRTFIKPEVS*VWSPTSAHLECGCG Trigger: GCCGCAACCACACTCAAGGTGAGCTGAGGTGGGTGACCACACCCAACTTACTTCTGGTTTGATGAATGTTCGATGAAGCCGAGAATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | TCTCGGCTTCATCGAACATTCATCAAACCAGAAGTAAGTTGGGTGTaGTCACCCACCTCAGCTCACCTTGAGTGTGGTTGCGGCATCACT | + |
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Preference number: 1 (lower is better) Translates to: SRLHRTFIKPEVSWV*SPTSAHLECGCGIT Trigger: AGTGATGCCGCAACCACACTCAAGGTGAGCTGAGGTGGGTGACCACACCCAACTTACTTCTGGTTTGATGAATGTTCGATGAAGCCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR GCA 90 bp | CCAGGAGGCTCCGAAGCTGTACATGAGCAAAGCTCAGATGGAGTCTaGCAACATGCACACAGTCAGAGTCCCACAACACTTAACAGAATT | + |
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Preference number: 1 (lower is better) Translates to: PGGSEAVHEQSSDGV*QHAHSQSPTTLNRI Trigger: AATTCTGTTAAGTGTTGTGGGACTCTGACTGTGTGCATGTTGGCAGACTCCATCTGAGCTTTGCTCATGTACAGCTTCGGAGCCTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR TCA 90 bp | GAGGCAGGAAGGCAGGAGAGCCTCACAGAGTGCACCAGGACCGTCTaGGATCACAAACATTTTACACGAACAATTTACTTCCTTTACGAT | + |
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Preference number: 1 (lower is better) Translates to: EAGRQESLTECTRTV*DHKHFTRTIYFLYD Trigger: ATCGTAAAGGAAGTAAATTGTTCGTGTAAAATGTTTGTGATCTCAGACGGTCCTGGTGCACTCTGTGAGGCTCTCCTGCCTTCCTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR GCA 90 bp | TATACATTAAGGCCTAACCTGTCAAAGGCAATGTCCAATGCTAACTaGCCATCTTCCTGTGCCCGCCTGCCATCAGGCCTTTGTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: YTLRPNLSKAMSNAN*PSSCARLPSGLCLF Trigger: AAAAAGACAAAGGCCTGATGGCAGGCGGGCACAGGAAGATGGGCAGTTAGCATTGGACATTGCCTTTGACAGGTTAGGCCTTAATGTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR GCA 90 bp | AGGGCTGAGGCACCTGGCAGCTCCTGTCTAAATATTACTGTTGACTaGAGTGAAGTCACTGCTCGAGAGCAAAGTACTGACTCATTTTTG | + |
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Preference number: 1 (lower is better) Translates to: RAEAPGSSCLNITVD*SEVTAREQSTDSFL Trigger: CAAAAATGAGTCAGTACTTTGCTCTCGAGCAGTGACTTCACTGCAGTCAACAGTAATATTTAGACAGGAGCTGCCAGGTGCCTCAGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR GCA 90 bp | GTAAGTTGGGTGTGGTCACCCACCTCAGCTCACCTTGAGTGTGGTTaGGGCATCACTATGCTAACCCACTTTCATATTATTGCATGTAAA | + |
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Preference number: 1 (lower is better) Translates to: VSWVWSPTSAHLECG*GITMLTHFHIIACK Trigger: TTTACATGCAATAATATGAAAGTGGGTTAGCATAGTGATGCCGCAACCACACTCAAGGTGAGCTGAGGTGGGTGACCACACCCAACTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | TGTCCACGTCGACGTCTTGGCAAGCAACATTCACCCTGCTGTGCATaGCATAAAGTCCAAAAAGGAAGTGGGTTGTTCTCAAGTATATCA | + |
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Preference number: 1 (lower is better) Translates to: CPRRRLGKQHSPCCA*HKVQKGSGLFSSIS Trigger: TGATATACTTGAGAACAACCCACTTCCTTTTTGGACTTTATGCCATGCACAGCAGGGTGAATGTTGCTTGCCAAGACGTCGACGTGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR TCA 90 bp | ATCAAGGTCCTTACTTGCAAAGATGTTCCCAGATGTTGCTCTAGGTaGAGACTTCTTGTCTCTGCAGACCTTTTTGCACTTACAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: IKVLTCKDVPRCCSR*RLLVSADLFALTSS Trigger: GCTGCTTGTAAGTGCAAAAAGGTCTGCAGAGACAAGAAGTCTTCACCTAGAGCAACATCTGGGAACATCTTTGCAAGTAAGGACCTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR TCA 90 bp | AATACCACAGCAGACATACGAACACACAACTTTAAAACACTGGCGTaGTACAAAAGGAATACTCACGAGCTAGCCTCGCCACAGTATCTA | + |
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Preference number: 1 (lower is better) Translates to: NTTADIRTHNFKTLA*YKRNTHELASPQYL Trigger: TAGATACTGTGGCGAGGCTAGCTCGTGAGTATTCCTTTTGTATCACGCCAGTGTTTTAAAGTTGTGTGTTCGTATGTCTGCTGTGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | CCTCTCCCACACATATGCATATATTTATTGCCATTAGAGTTCCACTaGTTTAACACCACACCATATAGCCATCTGCGGTCATTTGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PLPHICIYLLPLEFH*FNTTPYSHLRSFGF Trigger: GAAACCAAATGACCGCAGATGGCTATATGGTGTGGTGTTAAACCAGTGGAACTCTAATGGCAATAAATATATGCATATGTGTGGGAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR CCA 90 bp | TTTAAATTTCAGATTAAAGTCTTAGTTATACTGTACCAAATTTACTaGAGAATGGGAAGGGCTGAGGCACCTGGCAGCTCCTGTCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: FKFQIKVLVILYQIY*RMGRAEAPGSSCLN Trigger: ATTTAGACAGGAGCTGCCAGGTGCCTCAGCCCTTCCCATTCTCCAGTAAATTTGGTACAGTATAACTAAGACTTTAATCTGAAATTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGCTGATGGCCGTGAGCTaGCACGGCCAGCAGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: APAACTHAATALAWKVHWLMAVS*HGQQAS Trigger: AGAAGCCTGCTGGCCGTGTCAGCTCACGGCCATCAG...CCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGCACGCACGCAGCCACTaGCCTGGCATGGAAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: APAACTHAATALAWKVHWHARSH*PGMEGA Trigger: TGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTG...CCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGGGAAGGCGCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAGGGCATGGCTCCGAGTaGTGTGTGGTTGGGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SGKALPRLARTQPLPWHGGHGSE*CVVGRG Trigger: TCCTCTCCCAACCACACACCACTCGGAGCCATGCCC...TCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGCGCCTTCCCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCAAGGCTGCACCCCACCAGTCGGGGAGGCCGGGAGGCCGGGAGAGTAGCTCACCTGCGAGGCAGTaGCAGCAAGACCCACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TLKAAPHQSGRPGGRESSSPARQ*QQDPLG Trigger: ACCCAGTGGGTCTTGCTGTCACTGCCTCGCAGGTGA...GCTACTCTCCCGGCCTCCCGGCCTCCCCGACTGGTGGGGTGCAGCCTTGAGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | CGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACGCTGTGGAGGAGTGCTaGTCTGTCGGTCCGTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RGLHARSHCPGMEGALGNAVEEC*SVGPCC Trigger: GCAGCACGGACCGACAGATCAGCACTCCTCCACAGC...GTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGTCAGTGCACAGGGCATaGCTCCGAGTGGTGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: APAACTHAATALAWKVHWSVHRA*LRVVCG Trigger: ACCACACACCACTCGGAGCCATGCCCTGTGCACTGA...CCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR CAA 90 bp | ATGTTCAGCATCAGTGCACAGGGCATGGCTCCGAGTGGTGTGTGGTaGGGAGAGGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: MFSISAQGMAPSGVW*GEDPAWEQTLCSVG Trigger: GCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTGTGCACTGATGCTGAACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGGGCTGTCTGCCCATCTTCCTGTaGCCGCCTGCCATCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SADLFALTSSCVAAGLGCLPIFL*PPAIRP Trigger: AGGCCTGATGGCAGGCGGGCACAGGAAGATGGGCAG...ACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGGGCTGTTTCCAGGTTCAGAGGTaGCGGTGGTGGAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SADLFALTSSCVAAGLGCFQVQR*RWWRAR Trigger: CCTGGCTCTCCACCACCGTCACCTCTGAACCTGGAA...ACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACGGGATTTTACTGTCCATaGTACCTTTGCTGGATCCTT | + |
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Preference number: 2 (lower is better) Translates to: AACTHAATALAWKVHWETGFYCP*YLCWIL Trigger: AAGGATCCAGCAAAGGTACCATGGACAGTAAAATCC...CGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTGGGAACAGACCCTCTTGTCCATGGTACCTTTaGTGGATCCTTTCCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: WLRVVCGWERIRRGNRPSCPWYL*WILSQR Trigger: TCTTTGGGAAAGGATCCAGCAAAGGTACCATGGACA...AGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCCTGCCCATCTTCCTGTaGCCGCCTGCCATCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: EGLSPTMSGCKPVFPLFPLPIFL*PPAIRP Trigger: AGGCCTGATGGCAGGCGGGCACAGGAAGATGGGCAG...GGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCACGCAGCCACTGCCCTaGCATGGAAGGTGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: PQYLPIKTGLCLGSTQSITQPLP*HGRCTG Trigger: CCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGT...GATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGGGCTGTTGGAGTCTGCCAACATaGACACAGTCAGAGTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SADLFALTSSCVAAGLGCWSLPT*TQSESH Trigger: GTGGGACTCTGACTGTGTGCATGTTGGCAGACTCCA...ACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGCAATGTCCAATGCTAACTGCCCATCTTCCTGTGCCCGCCTGCCATCAGAGACAGGCTTGTGTTTaGGAAGCACACAGAGCATCG | + |
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Preference number: 2 (lower is better) Translates to: QRQCPMLTAHLPVPACHQRQACV*EAHRAS Trigger: CGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCT...CTGATGGCAGGCGGGCACAGGAAGATGGGCAGTTAGCATTGGACATTGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACACTCCACAGCGAGTACCATGAGCTGCATCTTCACTGTGCAGGCTCTGCTAAATTTACTGGAGAATaGGAAGGGCTGAGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: ATLHSEYHELHLHCAGSAKFTGE*EGLRHL Trigger: CAGGTGCCTCAGCCCTTCCCATTCTCCAGTAAATTT...AGCAGAGCCTGCACAGTGAAGATGCAGCTCATGGTACTCGCTGTGGAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCAGGCCCTGTGACTCGTaGCACAGCACAGCTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: PQYLPIKTGLCLGSTQSIRPCDS*HSTASQ Trigger: TTGAGAAGCTGTGCTGTGTCACGAGTCACAGGGCCT...GATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTaGACAGGGCATGGCTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LCIPAAGQHVNTAKSERLHVQHQ*TGHGSE Trigger: CTCGGAGCCATGCCCTGTGCACTGATGCTGAACATG...GAGCCTTTCACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCCTCCGAAGCTGTACATaGGCAAAGCTCAGATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: EGLSPTMSGCKPVFPLFPLRSCT*AKLRWS Trigger: ACTCCATCTGAGCTTTGCTCATGTACAGCTTCGGAG...GGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAGAAATACACTGAAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGAGCTCAGATGGAGTCTaGCAACATGCACACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GQRNTLKGYHPPCLAVNLSSDGV*QHAHSQ Trigger: CTGACTGTGTGCATGTTGGCAGACTCCATCTGAGCT...CAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTTCAGTGTATTTCTCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTTCAGTGCACAGGGCATaGCTCCGAGTGGTGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: KQRLCIPAAGQHVNTAKSSVHRA*LRVVCG Trigger: ACCACACACCACTCGGAGCCATGCCCTGTGCACTGA...ACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAATTCTCTTTCTTTCCACAGGGTCTCACACCAGACCCCAGGCTATCCTAGACAGAGAAATACACTaGAGGGCTATCACCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: CAILFLSTGSHTRPQAILDREIH*RAITHH Trigger: ATGGTGGGTGATAGCCCTTCAGTGTATTTCTCTGTC...TAGGATAGCCTGGGGTCTGGTGTGAGACCCTGTGGAAAGAAAGAGAATTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTGACAGAGAAATACACTaGAGGGCTATCACCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: KGYHPPCLAVNLYFHFSPDREIH*RAITHH Trigger: ATGGTGGGTGATAGCCCTTCAGTGTATTTCTCTGTC...AGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | GTACTAAAAGCATATTTATGGCCCACAATCAGCAAATGTGGACATTTTCTGTCTCACGCACGCAGCCACTaGCCTGGCATGGAAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLKAYLWPTISKCGHFLSHARSH*PGMEGA Trigger: TGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTG...AGACAGAAAATGTCCACATTTGCTGATTGTGGGCCATAAATATGCTTTTAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGGCAACTTCTATCAATACCAACTGAAGCCTCACATATAAAATTCCCTGTTGTCAACTCTCAAGGCTaGACCCCACCAGTCGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RGQLLSIPTEASHIKFPVVNSQG*TPPVGE Trigger: CTCCCCGACTGGTGGGGTGCAGCCTTGAGAGTTGAC...AACAGGGAATTTTATATGTGAGGCTTCAGTTGGTATTGATAGAAGTTGCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGTCTTAGTTATACTGTACCAAATTTACTGGAGAATGGGAAGGGCTGAGGCACATGTTCAGCATCAGTaGACAGGGCATGGCTCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: KVLVILYQIYWRMGRAEAHVQHQ*TGHGSE Trigger: CTCGGAGCCATGCCCTGTGCACTGATGCTGAACATG...TGCCTCAGCCCTTCCCATTCTCCAGTAAATTTGGTACAGTATAACTAAGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGTCAGTTGGCACAAACTaGAGGATTTTACTGTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: KYKQRLCIPAAGQHVNTASVGTN*RILLSM Trigger: CATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGA...CGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACCACACCATATAGCCATCTGCGGTCATTTGGTTTCTATAAATACATATAAAAGACAGGCTTGTGTTTaGGAAGCACACAGAGCATCG | + |
|
Preference number: 2 (lower is better) Translates to: TPHHIAICGHLVSINTYKRQACV*EAHRAS Trigger: CGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCT...TTTATATGTATTTATAGAAACCAAATGACCGCAGATGGCTATATGGTGTGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAAATTTCAGTTCTCTACAAGTGTCTACTACTTCACAGCCAGTCTTAAATCTAGTCCAAAAAGGAAGTaGGTTGTTCTCAAGTATATC | + |
|
Preference number: 2 (lower is better) Translates to: HKFQFSTSVYYFTASLKSSPKRK*VVLKYI Trigger: GATATACTTGAGAACAACCCACTTCCTTTTTGGACT...AGATTTAAGACTGGCTGTGAAGTAGTAGACACTTGTAGAGAACTGAAATTTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | GGAAGGCGCTCCCGCGGCTTGCACGCACGCAGCCACTaGCCTGGCATGGAAGGTGCACTGGGAAACGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GRRSRGLHARSH*PGMEGALGNVE Trigger: CTCCACGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGCGCCTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | CACCAGTCGGGGAGGCCGGGAGGCCGGGAGAGTAGCTaGCAGCTTCCAGGTTCAGAGGTGACGGTGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HQSGRPGGRESS*QLPGSEVTVVE Trigger: CTCCACCACCGTCACCTCTGAACCTGGAAGCTGCCAGCTACTCTCCCGGCCTCCCGGCCTCCCCGACTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTCAAGGCTGCACCCCACCAGTCGGGGAGGCCGGGAGGCCGGGAGAGTAGCCCACCTCAGCTCACCTaGAGTGTGGTTGCGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: TLKAAPHQSGRPGGRESSPPQLT*SVVAAS Trigger: TGATGCCGCAACCACACTCAAGGTGAGCTGAGGTGG...GCTACTCTCCCGGCCTCCCGGCCTCCCCGACTGGTGGGGTGCAGCCTTGAGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | GCACAGCTTCTCAACGTGCTTGTCAACTCTCAAGGCTaGACCCCACCAGTCGGGGAGGCCGGGAGGCCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AQLLNVLVNSQG*TPPVGEAGRPG Trigger: TCCCGGCCTCCCGGCCTCCCCGACTGGTGGGGTGCAGCCTTGAGAGTTGACAAGCACGTTGAGAAGCTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | CACAGCAATCAGACCCCCAGGGACCTCTCCTTCTCGTaGGACCTTCTCATGGGGACCCACAGGAGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSNQTPRDLSFS*DLLMGTHRRRQ Trigger: CTGCCTCCTCCTGTGGGTCCCCATGAGAAGGTCCCACGAGAAGGAGAGGTCCCTGGGGGTCTGATTGCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACCGATCAAGACAGGCTaGTGTTTGGGAAGCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PRLARTQPLPWHGRCTGKPIKTG*CLGSTQ Trigger: CTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGG...TTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | GCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTaGGAACAGACCCTCTGTTCAGTTGGCACAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: APSGVWLGEDPA*EQTLCSVGTNW Trigger: CCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGGCATGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTGGGAACAGACCCTCTGTTCAGTaGGCACAAACTGGAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: HRAWLRVVCGWERIRRGNRPSVQ*AQTGGF Trigger: AAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCT...GTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | CTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTaGACTGGGAAACGTGGAGCAGCAATACTGAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LARTQPLPWHGR*TGKRGAAILSN Trigger: GTTACTCAGTATTGCTGCTCCACGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | ACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTaGACAGGGCATGGCTCCGAGTGGTGTGTGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TAKSERLHVQHQ*TGHGSEWCVVG Trigger: CCCAACCACACACCACTCGGAGCCATGCCCTGTGCACTGATGCTGAACATGGAGCCTTTCACTCTTCGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | AGGCCTAACCTGTCAAAGGCAATGTCCAATGCTAACTaGCCATCTTCCTGTGCCCGCCTGCCATCAGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RPNLSKAMSNAN*PSSCARLPSGL Trigger: AAGGCCTGATGGCAGGCGGGCACAGGAAGATGGGCAGTTAGCATTGGACATTGCCTTTGACAGGTTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR TCA 72 bp | AAAACACTGGACAGTGATGAGCCTGTGAAGGCCCTGTaGCTCGTGACACAGCACAGCTTCTCAACGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KTLDSDEPVKAL*LVTQHSFSTCL Trigger: CAAGCACGTTGAGAAGCTGTGCTGTGTCACGAGTCACAGGGCCTTCACAGGCTCATCACTGTCCAGTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGGGCTGTAGACCCTCTGTTCAGTaGGCACAAACTGGAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SADLFALTSSCVAAGLGCRPSVQ*AQTGGF Trigger: AAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCT...ACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTCTTAGTTATACTGTACCAAATTTACTGGAGAATGGGAAGGGCTGAGGCACCGAGTGGTGTGTGGTaGGGAGAGGATCCGGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KVLVILYQIYWRMGRAEAPSGVW*GEDPAW Trigger: CCACGCCGGATCCTCTCCCAACCACACACCACTCGG...TGCCTCAGCCCTTCCCATTCTCCAGTAAATTTGGTACAGTATAACTAAGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR TCA 72 bp | AAGAATAATTTACTTCTCAAGTCACCTGCGAGGCAGTaGCAGCAAGACCCACTGGGTGAGTCGGCGTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KNNLLLKSPARQ*QQDPLGESAFS Trigger: GCTGAACGCCGACTCACCCAGTGGGTCTTGCTGTCACTGCCTCGCAGGTGACTTGAGAAGTAAATTATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTCCGATCAAGACAGGCTaGTGTTTGGGAAGCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: KGYHPPCLAVNLYFHFSPPIKTG*CLGSTQ Trigger: CTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGG...AGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | TCCGAAGCTGTACATGAGCAAAGCTCAGATGGAGTCTaGCAACATGCACACAGTCAGAGTCCCACAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: SEAVHEQSSDGV*QHAHSQSPTTL Trigger: AAGTGTTGTGGGACTCTGACTGTGTGCATGTTGGCAGACTCCATCTGAGCTTTGCTCATGTACAGCTTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | CCAGACAGTTCACAACTGAGTGTGTCAGGGGATCTGTaGAATTCTCTTTCTTTCCACAGGGTCTCACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PDSSQLSVSGDL*NSLSFHRVSHQ Trigger: CTGGTGTGAGACCCTGTGGAAAGAAAGAGAATTGCACAGATCCCCTGACACACTCAGTTGTGAACTGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | GCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTaGAGGATTTTACTGTCCATGGTACCTTTGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: AWEQTLCSVGTN*RILLSMVPLLD Trigger: ATCCAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | CGGCTTCATCGAACATTCATCAAACCAGAAGTAAGTTaGGTGTGGTCACCCACCTCAGCTCACCTTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLHRTFIKPEVS*VWSPTSAHLEC Trigger: ACACTCAAGGTGAGCTGAGGTGGGTGACCACACCCAACTTACTTCTGGTTTGATGAATGTTCGATGAAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTCTCCCAAAGACAGGCTTGTGTTaGGGAAGCACACAGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: YHPPCLAVNLYFHFSPLPKTGLC*GSTQSI Trigger: GATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTT...TGGGAGAGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | GCACCTGGCAGCTCCTGTCTAAATATTACTGTTGACTaGAGTGAAGTCACTGCTCGAGAGCAAAGTACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: APGSSCLNITVD*SEVTAREQSTD Trigger: GTCAGTACTTTGCTCTCGAGCAGTGACTTCACTGCAGTCAACAGTAATATTTAGACAGGAGCTGCCAGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | CGACGTCTTGGCAAGCAACATTCACCCTGCTGTGCATaGCATAAAGTCCAAAAAGGAAGTGGGTTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RRLGKQHSPCCA*HKVQKGSGLFS Trigger: TGAGAACAACCCACTTCCTTTTTGGACTTTATGCCATGCACAGCAGGGTGAATGTTGCTTGCCAAGACGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGAAGACAGGCTTGTGTTaGGGAAGCACACAGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: QTKALHSSCWTTCQYCEEKTGLC*GSTQSI Trigger: GATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTT...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR TCA 72 bp | AGGCAGGAGAGCCTCACAGAGTGCACCAGGACCGTCTaGGATCACAAACATTTTACACGAACAATTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RQESLTECTRTV*DHKHFTRTIYF Trigger: GAAGTAAATTGTTCGTGTAAAATGTTTGTGATCTCAGACGGTCCTGGTGCACTCTGTGAGGCTCTCCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR GCA 72 bp | GCTATGCCCAACTGCCCCCTGATAGTTATGTCAATCTaGACAGTCAGAGGGCAACTTCTATCAATACCAACT | + |
|
Preference number: 3 (lower is better) Translates to: AMPNCPLIVMSI*TVRGQLLSIPT Trigger: AGTTGGTATTGATAGAAGTTGCCCTCTGACTGTGCAGATTGACATAACTATCAGGGGGCAGTTGGGCATAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | CAGATTAAAGTCTTAGTTATACTGTACCAAATTTACTaGAGAATGGGAAGGGCTGAGGCACCTGGCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QIKVLVILYQIY*RMGRAEAPGSS Trigger: GGAGCTGCCAGGTGCCTCAGCCCTTCCCATTCTCCAGTAAATTTGGTACAGTATAACTAAGACTTTAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGTTTAATATACATTAAGCTGTCCATGGTACCTTaGCTGGATCCTTTCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QDRLVFGKHTEHRLIYIKLSMVP*LDPFPK Trigger: CTTTGGGAAAGGATCCAGCAAAGGTACCATGGACAG...CTTAATGTATATTAAACGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGCCATCTGCGGTCATTaGGTTTCTATAAATACATAT | + |
|
Preference number: 3 (lower is better) Translates to: PQYLPIKTGLCLGSTQSIAICGH*VSINTY Trigger: ATATGTATTTATAGAAACCAAATGACCGCAGATGGC...GATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR TCA 72 bp | TATACTGTACCAAATTTACTGGAGAATGGGAAGGGCTaGGGCACCTGGCAGCTCCTGTCTAAATATTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: YTVPNLLENGKG*GTWQLLSKYYC Trigger: ACAGTAATATTTAGACAGGAGCTGCCAGGTGCCTCAGCCCTTCCCATTCTCCAGTAAATTTGGTACAGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR TCA 72 bp | CTTACTTGCAAAGATGTTCCCAGATGTTGCTCTAGGTaGAGACTTCTTGTCTCTGCAGACCTTTTTGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LTCKDVPRCCSR*RLLVSADLFAL Trigger: AAGTGCAAAAAGGTCTGCAGAGACAAGAAGTCTTCACCTAGAGCAACATCTGGGAACATCTTTGCAAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | CACATATGCATATATTTATTGCCATTAGAGTTCCACTaGTTTAACACCACACCATATAGCCATCTGCGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HICIYLLPLEFH*FNTTPYSHLRS Trigger: TGACCGCAGATGGCTATATGGTGTGGTGTTAAACCAGTGGAACTCTAATGGCAATAAATATATGCATATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACCACACCATATAGCCATCTGCGGTCATTTGGTTTCTATAAATACATATAAACCTGCCATCAGGCCTTaGTCTTTTTCACATGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: TPHHIAICGHLVSINTYKPAIRP*SFSHDF Trigger: GAAATCATGTGAAAAAGACAAAGGCCTGATGGCAGG...TTTATATGTATTTATAGAAACCAAATGACCGCAGATGGCTATATGGTGTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| 3UTR CCA 72 bp | TTATACATCAGCAAAGCAGTACTAAAAGCATATTTATaGCCCACAATCAGCAAATGTGGACATTTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LYISKAVLKAYL*PTISKCGHFLS Trigger: AGACAGAAAATGTCCACATTTGCTGATTGTGGGCCATAAATATGCTTTTAGTACTGCTTTGCTGATGTATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058538.7 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGCGGCCGGCAGCACGGTaGCTTTGGTCCCTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APAACTHAATALAWKVHWRPAAR*LWSLSA Trigger: AGCAGACAGGGACCAAAGTCACCGTGCTGCCGGCCG...CCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGGCATGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTGGGAACCGGCCGGCAGCACGGTaGCTTTGGTCCCTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRAWLRVVCGWERIRRGNRPAAR*LWSLSA Trigger: AGCAGACAGGGACCAAAGTCACCGTGCTGCCGGCCG...GTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGGCATGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTGGGAACGGGGAGCTGCCGGGATaGACCAGGTCGCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRAWLRVVCGWERIRRGNGELPG*TRSLQG Trigger: TCCCTGAAGCGACCTGGTTCATCCCGGCAGCTCCCC...GTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCATGCCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | AGCGGGAAGGCGCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGACCGGTGCAGTTTTTCTaGCTGGAGACCGCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKALPRLARTQPLPWHGPVQFF*LETALH Trigger: ATGGAGAGCGGTCTCCAGGCAGAAAAACTGCACCGG...TCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGCGCCTTCCCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | TTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACGTGGAGAGGTGGGTCGCTCACTaGGAGATGGCCCAGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHARSHCPGMEGALGNVERWVAH*EMAQSD Trigger: GTCGGACTGGGCCATCTCTCAGTGAGCGACCCACCT...CTCCACGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTGGGAACAGACCCTCTAGGCTCTGCTGCCCTTaGAGGTCCATCTCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLRVVCGWERIRRGNRPSRLCCP*RSISPL Trigger: CAAGGGGGAGATGGACCTTCAAGGGCAGCAGAGCCT...AGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACGGGTCCATCTCCCCCTTaGCCTTTTCGATCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AACTHAATALAWKVHWETGPSPP*PFRSFL Trigger: AAGGAAAGATCGAAAAGGTCAAGGGGGAGATGGACC...CGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGAGATGTTGCTCTAGGTaGAGACTTCTTGTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APAACTHAATALAWKVHWRCCSR*RLLVSA Trigger: TGCAGAGACAAGAAGTCTTCACCTAGAGCAACATCT...CCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR GCA 90 bp | GCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACGTGGAGCAGCAATACTGAGGCTGCATCTTCACTGTaGAGGCTCTGCTGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATALAWKVHWETWSSNTEAASSL*RLCWAE Trigger: CTCCGCCCAGCAGAGCCTGCACAGTGAAGATGCAGC...CTCAGTATTGCTGCTCCACGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCGAGTGGTGTGTGGTTGGGAGAGGATCCGGCGTGGGAACAGACCCTCTGGTAGTCCTTCAGCCTaGCTTCACAGTCTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WLRVVCGWERIRRGNRPSGSPSA*LHSLSP Trigger: AGGTGACAGACTGTGAAGGCAGGCTGAAGGACTACC...AGAGGGTCTGTTCCCACGCCGGATCCTCTCCCAACCACACACCACTCGGAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCGCGGCTTGCACGCACGCAGCCACTGCCCTGGCATGGAAGGTGCACTGGAAGACTTCTTGTCTCTaGAGACCTTTTTGCACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: APAACTHAATALAWKVHWKTSCL*RPFCTY Trigger: GTAAGTGCAAAAAGGTCTGCAGAGACAAGAAGTCTT...CCAGTGCACCTTCCATGCCAGGGCAGTGGCTGCGTGCGTGCAAGCCGCGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR CCA 90 bp | GTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATAGGCCTCGATCTCCGTaGGCTCGGCCGGCAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VGTDPLFSWHKLEDFTVHRPRSP*ARPAAR Trigger: CCGTGCTGCCGGCCGAGCCCACGGAGATCGAGGCCT...ATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | GGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTGGAGACCGCTCTCCATaGTGTGGATCTGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGVGTDPLFSWHKLEDFGDRSP*CGSGPG Trigger: ACCTGGCCCAGATCCACACCATGGAGAGCGGTCTCC...AAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGAGGCCTCGATCTCCGTaGGCTCGGCCGGCAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSVGTNWRILLSMVPLLRPRSP*ARPAAR Trigger: CCGTGCTGCCGGCCGAGCCCACGGAGATCGAGGCCT...CAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTGCCCTGGCATGGAAGGTGCACTGGGAAACGTGGAGCAGCAATACTGAGGAATACGAAGATTACTaGGGAGCTGCCGGGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ATALAWKVHWETWSSNTEEYEDY*GAAGMN Trigger: GTTCATCCCGGCAGCTCCCCAGTAATCTTCGTATTC...CTCAGTATTGCTGCTCCACGTTTCCCAGTGCACCTTCCATGCCAGGGCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | TCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTCGTATCTCCTCCAGCTaGTCCTGCAGCTGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGVGTDPLFSWHKLEDFTRISSS*SCSCFS Trigger: CGAGAAGCAGCTGCAGGATCAGCTGGAGGAGATACG...AGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGTGCTGTGGAGGAGTGCTaGTCTGTCGGTCCGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSTDQDRLVFGKHTEHRAVEEC*SVGPCC Trigger: GCAGCACGGACCGACAGATCAGCACTCCTCCACAGC...ACGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR GCA 90 bp | GTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATAGCCGCTTGGTGGCCTaGCCCAGAGACCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGTDPLFSWHKLEDFTVHSRLVA*PRDLST Trigger: TGTGGAGAGGTCTCTGGGGCAGGCCACCAAGCGGCT...ATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CCCATCTTCCTGTGCCCGCCTGCCATCAGGCCTTTGTCTTTTTCACATGATTTCAGATTACTGGGGAGCTaGCGGGATGAACCAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLCPPAIRPLSFSHDFRLLGS*RDEPGR Trigger: GCGACCTGGTTCATCCCGGCAGCTCCCCAGTAATCT...GAAATCATGTGAAAAAGACAAAGGCCTGATGGCAGGCGGGCACAGGAAGATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTTGTCCTGTAGCCGCTTaGTGGCCTGCCCCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KGYHPPCLAVNLYFHFSPCPVAA*WPAPET Trigger: GGTCTCTGGGGCAGGCCACCAAGCGGCTACAGGACA...AGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CAA 72 bp | TCTCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTaGCCGCAGGACTGGGCTGTCTTAGCTGTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQTFLHLQAAV*PQDWAVLAVEE Trigger: CTCCTCCACAGCTAAGACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | GGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTGGTAGTCCTTCAGCCTaGCTTCACAGTCTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGVGTDPLFSWHKLEDFGSPSA*LHSLSP Trigger: AGGTGACAGACTGTGAAGGCAGGCTGAAGGACTACC...AAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTCCGGTGCAGTTTTTCTaGCTGGAGACCGCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGVGTDPLFSWHKLEDFTPVQFF*LETALH Trigger: ATGGAGAGCGGTCTCCAGGCAGAAAAACTGCACCGG...AGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGAGCCGCTTGGTGGCCTaGCCCAGAGACCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTKALHSSCWTTCQYCEESRLVA*PRDLST Trigger: TGTGGAGAGGTCTCTGGGGCAGGCCACCAAGCGGCT...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | GATCAATGCAATGACTCAACAGAGGAAGAGTCTGAGAGTAAGGCAGGCCCTGGGCTCTGTCTCTATGTCTaGCTGCGAGGCCTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DQCNDSTEEESESKAGPGLCLYV*LRGLDL Trigger: GAGATCGAGGCCTCGCAGGCAGACATAGAGACAGAG...CCCAGGGCCTGCCTTACTCTCAGACTCTTCCTCTGTTGAGTCATTGCATTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTGAAAGGCTCCCAGCTGCTTCTCGATaGCCTGCAGCTTCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCIPAAGQHVNTAKSERLPAASR*PAASPS Trigger: AGACGGGGAAGCTGCAGGCCATCGAGAAGCAGCTGG...GAGCCTTTCACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR CAA 72 bp | GAGAGGATCCGGCGTGGGAACAGACCCTCTGTTCAGTaGGCACAAACTGGAGGATTTTACTGTCCATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ERIRRGNRPSVQ*AQTGGFYCPWY Trigger: GTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | GGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTTCAGCACCTTCTGCCTaGACTCAGTCTCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGVGTDPLFSWHKLEDFSAPSA*TQSLCL Trigger: AAGGCAAAGAGACTGAGTTCAGGCAGAAGGTGCTGA...AAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | GATCAATGCAATGACTCAACAGAGGAAGAGTCTGAGAGTAAGGCAGGCCCTGGGTCACCTCCTCCTCATTaGCCTGTGCCTCCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: DQCNDSTEEESESKAGPGSPPPH*PVPPEL Trigger: AAGTTCAGGAGGCACAGGTCAATGAGGAGGAGGTGA...CCCAGGGCCTGCCTTACTCTCAGACTCTTCCTCTGTTGAGTCATTGCATTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGATCCTTTCCCAAAGACAGTAGGCTCTGCTGCCCTTaGAGGTCCATCTCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEDFTVHGTFAGSFPKDSRLCCP*RSISPL Trigger: CAAGGGGGAGATGGACCTTCAAGGGCAGCAGAGCCT...ACTGTCTTTGGGAAAGGATCCAGCAAAGGTACCATGGACAGTAAAATCCTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CCCATCTTCCTGTGCCCGCCTGCCATCAGGCCTTTGTCTTTTTCACATGATTTCCGACGCAAGATGAGCTaGACGTCACTAGCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLCPPAIRPLSFSHDFRRKMS*TSLAYC Trigger: GCAGTATGCTAGTGACGTGCAGCTCATCTTGCGTCG...GAAATCATGTGAAAAAGACAAAGGCCTGATGGCAGGCGGGCACAGGAAGATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTACTTTGGTCCCTGTCTaGTGGATGAACTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGVGTDPLFSWHKLEDFTTLVPV*WMNCWR Trigger: CCTCCAGCAGTTCATCCAGCAGACAGGGACCAAAGT...AGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGCCAGCTGCTTCTCGATaGCCTGCAGCTTCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSVGTNWRILLSMVPLLPAASR*PAASPS Trigger: AGACGGGGAAGCTGCAGGCCATCGAGAAGCAGCTGG...CAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGAGAAATACACTGAAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGGGATCTCTGCCTCACTaGACTCCAGCTGCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQRNTLKGYHPPCLAVNLGSLPH*TPAASR Trigger: TCGAGAAGCAGCTGGAGTCCAGTGAGGCAGAGATCC...CAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTTCAGTGTATTTCTCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGATCCTTTCCCAAAGACAGTGGAGACCGCTCTCCATaGTGTGGATCTGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEDFTVHGTFAGSFPKDSGDRSP*CGSGPG Trigger: ACCTGGCCCAGATCCACACCATGGAGAGCGGTCTCC...ACTGTCTTTGGGAAAGGATCCAGCAAAGGTACCATGGACAGTAAAATCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAGGTGGGTCGCTCACTaGGAGATGGCCCAGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYKQRLCIPAAGQHVNTARWVAH*EMAQSD Trigger: GTCGGACTGGGCCATCTCTCAGTGAGCGACCCACCT...CGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGATCCTTTCCCAAAGACAGTCCACGTCGTTTCTCTTaGTCCTCTGCTCCAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEDFTVHGTFAGSFPKDSPRRFS*SSAPGG Trigger: TCCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGG...ACTGTCTTTGGGAAAGGATCCAGCAAAGGTACCATGGACAGTAAAATCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CAACATGTCAATACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTGCACACGTATCTCCTCCAGCTaGTCCTGCAGCTGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QHVNTAKSERLHVQHQCTRISSS*SCSCFS Trigger: CGAGAAGCAGCTGCAGGATCAGCTGGAGGAGATACG...TGTGCACTGATGCTGAACATGGAGCCTTTCACTCTTCGCAGTATTGACATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTACAAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAGGGGAGCTGCCGGGATaGACCAGGTCGCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NATNTNKGFAFQLLDNMSGELPG*TRSLQG Trigger: TCCCTGAAGCGACCTGGTTCATCCCGGCAGCTCCCC...TGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTTGTAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTCTACAGCTGTACTTCTaGTCCCAGAACCGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGVGTDPLFSWHKLEDFTLQLYF*SQNRIS Trigger: AGAGATCCGGTTCTGGGAGCAGAAGTACAGCTGTAG...AGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATCTCCTCATTGACCTGTaGCTCCTGAACTTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTDPLFSWHKLEDFTVHLLIDL*LLNFPV Trigger: CACCGGGAAGTTCAGGAGGCACAGGTCAATGAGGAG...ATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTCTCCCACTCCTCATTGACCTGTaGCTCCTGAACTTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YHPPCLAVNLYFHFSPLPLLIDL*LLNFPV Trigger: CACCGGGAAGTTCAGGAGGCACAGGTCAATGAGGAG...TGGGAGAGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGAGATTACTGGGGAGCTaGCGGGATGAACCAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSVGTNWRILLSMVPLLRLLGS*RDEPGR Trigger: GCGACCTGGTTCATCCCGGCAGCTCCCCAGTAATCT...CAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTGAAAGGCTCCCTGCCGCAGCTCTTTaGTCAACTGCTCTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCIPAAGQHVNTAKSERLPAAAL*STALAP Trigger: AGGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGG...GAGCCTTTCACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTCCTGCCGCAGCTCTTTaGTCAACTGCTCTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGYHPPCLAVNLYFHFSPPAAAL*STALAP Trigger: AGGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGG...AGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| 3UTR CAA 72 bp | GCTCTAGGTGAAGACTTCTTGTCTCTGCAGACCTTTTaGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGEDFLSLQTF*HLQAAVLPQDW Trigger: CCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGAGACAAGAAGTCTTCACCTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTCATGCGGTGCCAAGTaGCGCTCAGTGTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTKALHSSCWTTCQYCEESCGAK*RSVSLH Trigger: ATGGAGAGACACTGAGCGGCACTTGGCACCGCATGA...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTCTCCCAACTTTGGTCCCTGTCTaGTGGATGAACTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YHPPCLAVNLYFHFSPLPTLVPV*WMNCWR Trigger: CCTCCAGCAGTTCATCCAGCAGACAGGGACCAAAGT...TGGGAGAGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGCTCTGTCTCTATGTCTaGCTGCGAGGCCTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTKALHSSCWTTCQYCEELCLYV*LRGLDL Trigger: GAGATCGAGGCCTCGCAGGCAGACATAGAGACAGAG...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TATCACCCACCATGTCTGGCTGTAAACCTGTATTTCCACTTTTCCCCTCTCCCAGCGAGTACCATGAGCTaGATCTTCACTGTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YHPPCLAVNLYFHFSPLPASTMS*IFTVQA Trigger: AGCCTGCACAGTGAAGATGCAGCTCATGGTACTCGC...TGGGAGAGGGGAAAAGTGGAAATACAGGTTTACAGCCAGACATGGTGGGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR CCA 90 bp | GGATCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTGTTCGACCTATAGCTTaGGCTAAGGCTATTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: GSGVGTDPLFSWHKLEDFVRPIA*AKAITT Trigger: GGTTGTAATAGCCTTAGCCCAAGCTATAGGTCGAAC...AAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CAACATGTCAATACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTGCACAGGATCTCTGCCTCACTaGACTCCAGCTGCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QHVNTAKSERLHVQHQCTGSLPH*TPAASR Trigger: TCGAGAAGCAGCTGGAGTCCAGTGAGGCAGAGATCC...TGTGCACTGATGCTGAACATGGAGCCTTTCACTCTTCGCAGTATTGACATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTACAAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCATGTCCTGTAGCCGCTTaGTGGCCTGCCCCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NATNTNKGFAFQLLDNMSCPVAA*WPAPET Trigger: GGTCTCTGGGGCAGGCCACCAAGCGGCTACAGGACA...TGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTTGTAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGGACCCAGACTGGAATaGCGCCTCTGTCTCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSVGTNWRILLSMVPLLGPRLE*RLCLYV Trigger: GACATAGAGACAGAGGCGCCATTCCAGTCTGGGTCC...CAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| 3UTR CAA 72 bp | CTGCCCATCTTCCTGTGCCCGCCTGCCATCAGGCCTTaGTCTTTTTCACATGATTTCCTCAATCTATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIFLCPPAIRP*SFSHDFLNLSR Trigger: CCTTGATAGATTGAGGAAATCATGTGAAAAAGACAAAGGCCTGATGGCAGGCGGGCACAGGAAGATGGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTGAAAGGCTCTCAGCACCTTCTGCCTaGACTCAGTCTCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCIPAAGQHVNTAKSERLSAPSA*TQSLCL Trigger: AAGGCAAAGAGACTGAGTTCAGGCAGAAGGTGCTGA...GAGCCTTTCACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CAACATGTCAATACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTGCACATTGACCTGTGCCTCCTaGACTTCCCGGTGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHVNTAKSERLHVQHQCTLTCAS*TSRCSF Trigger: AAAACTGCACCGGGAAGTTCAGGAGGCACAGGTCAA...TGTGCACTGATGCTGAACATGGAGCCTTTCACTCTTCGCAGTATTGACATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTTCGCTCACTGAGAGATaGCCCAGTCCGACGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQRLCIPAAGQHVNTAKSSLTER*PSPTQD Trigger: ATCTTGCGTCGGACTGGGCCATCTCTCAGTGAGCGA...ACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGATCCTTTCCCAAAGACAGTGGTCCATCTCCCCCTTaGCCTTTTCGATCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEDFTVHGTFAGSFPKDSGPSPP*PFRSFL Trigger: AAGGAAAGATCGAAAAGGTCAAGGGGGAGATGGACC...ACTGTCTTTGGGAAAGGATCCAGCAAAGGTACCATGGACAGTAAAATCCTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTCGACGCAAGATGAGCTaGACGTCACTAGCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQRLCIPAAGQHVNTAKSRRKMS*TSLAYC Trigger: GCAGTATGCTAGTGACGTGCAGCTCATCTTGCGTCG...ACTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGAAATACACTGAAGGGCTATCACCCACCATGTCTGGCTGTAAACCTGCTCTGCAGACCTTTTTaGACTTACAAGCAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRNTLKGYHPPCLAVNLLCRPF*TYKQLC Trigger: ACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGAG...CAGGTTTACAGCCAGACATGGTGGGTGATAGCCCTTCAGTGTATTTCTCTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGGAATACGAAGATTACTaGGGAGCTGCCGGGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVQLAQTGGFYCPWYLCWEYEDY*GAAGMN Trigger: GTTCATCCCGGCAGCTCCCCAGTAATCTTCGTATTC...CCAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGTCACCTCCTCCTCATTaGCCTGTGCCTCCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KYKQRLCIPAAGQHVNTASPPPH*PVPPEL Trigger: AAGTTCAGGAGGCACAGGTCAATGAGGAGGAGGTGA...CGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | CAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGTTTAATATACATTAAGTACAAGCAGCTGTGTTaGCGCAGGACTGGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDRLVFGKHTEHRLIYIKYKQLC*RRTGLS Trigger: AGACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTA...CTTAATGTATATTAAACGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGGCTATTACAACCTCCTaGCAAGTTGTGACTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTKALHSSCWTTCQYCEEAITTS*QVVTSV Trigger: CACGGAAGTCACAACTTGCCAGGAGGTTGTAATAGC...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | TACAAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTTCATGCGGTGCCAAGTaGCGCTCAGTGTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKYKQRLCIPAAGQHVNTSCGAK*RSVSLH Trigger: ATGGAGAGACACTGAGCGGCACTTGGCACCGCATGA...AGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | CAACATGTCAATACTGCGAAGAGTGAAAGGCTCCATGTTCAGCATCAGTGCACAGTTCGACCTATAGCTTaGGCTAAGGCTATTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: QHVNTAKSERLHVQHQCTVRPIA*AKAITT Trigger: GGTTGTAATAGCCTTAGCCCAAGCTATAGGTCGAAC...TGTGCACTGATGCTGAACATGGAGCCTTTCACTCTTCGCAGTATTGACATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | TACAAATACAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGGACCCAGACTGGAATaGCGCCTCTGTCTCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKYKQRLCIPAAGQHVNTGPRLE*RLCLYV Trigger: GACATAGAGACAGAGGCGCCATTCCAGTCTGGGTCC...AGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTGTATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGTATCAAGGTCCTTACTTaGAAAGATGTTCCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TVSTDQDRLVFGKHTEHRIKVLT*KDVPRC Trigger: ACATCTGGGAACATCTTTGCAAGTAAGGACCTTGAT...ACGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| 3UTR CAA 72 bp | AAGATGTTCCCAGATGTTGCTCTAGGTGAAGACTTCTaGTCTCTGCAGACCTTTTTGCACTTACAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMFPDVALGEDF*SLQTFLHLQAA Trigger: AGCTGCTTGTAAGTGCAAAAAGGTCTGCAGAGACAAGAAGTCTTCACCTAGAGCAACATCTGGGAACATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATACCACAGCAGACATACGAACACACAACTTTAAAACACTGGCGTGATTTGACCTGTGCCTCCTaGACTTCCCGGTGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKIPQQTYEHTTLKHWRDLTCAS*TSRCSF Trigger: AAAACTGCACCGGGAAGTTCAGGAGGCACAGGTCAA...ATCACGCCAGTGTTTTAAAGTTGTGTGTTCGTATGTCTGCTGTGGTATTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAACTTCTATCAATACCAACTGAAGCCTCACATATAAAATTCCCTGTTGCTATTACAACCTCCTaGCAAGTTGTGACTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQLLSIPTEASHIKFPVAITTS*QVVTSV Trigger: CACGGAAGTCACAACTTGCCAGGAGGTTGTAATAGC...AACAGGGAATTTTATATGTGAGGCTTCAGTTGGTATTGATAGAAGTTGCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | TCGCTTCAGGGACCCAGACTGGAATGGCGCCTCTGTCTCTATGTCTaGCTGCGAGGCCTCGATCTCCGTGGGCTCGGCCGGCAGCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLQGPRLEWRLCLYV*LRGLDLRGLGRQHG Trigger: ACCGTGCTGCCGGCCGAGCCCACGGAGATCGAGGCCTCGCAGGCAGACATAGAGACAGAGGCGCCATTCCAGTCTGGGTCCCTGAAGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTCAAGGCTGCACCCCACCAGTCGGGGAGGCCGGGAGGCCGGGAGAGTAGCTCCACGTCGTTTCTCTaGATCCTCTGCTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLKAAPHQSGRPGGRESSSTSFL*ILCSRR Trigger: CCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGGA...GCTACTCTCCCGGCCTCCCGGCCTCCCCGACTGGTGGGGTGCAGCCTTGAGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | TTCAGGGACCCAGACTGGAATGGCGCCTCTGTCTCTATGTCTGCCTaGGAGGCCTCGATCTCCGTGGGCTCGGCCGGCAGCACGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: FRDPDWNGASVSMSA*EASISVGSAGSTVT Trigger: AGTCACCGTGCTGCCGGCCGAGCCCACGGAGATCGAGGCCTCGCAGGCAGACATAGAGACAGAGGCGCCATTCCAGTCTGGGTCCCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS CCA 90 bp | CTGGGGAGCTGCCGGGATGAACCAGGTCGCTTCAGGGACCCAGACTaGAATGGCGCCTCTGTCTCTATGTCTGCCTGCGAGGCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LGSCRDEPGRFRDPD*NGASVSMSACEASI Trigger: GATCGAGGCCTCGCAGGCAGACATAGAGACAGAGGCGCCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCCCGGCAGCTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | TGGAGGTTGACCTGCCGCAGCTCTTTGGTCAACTGCTCTAGCTCCTaGTCCTTGTCCTGTAGCCGCTTGGTGGCCTGCCCCAGAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: WRLTCRSSLVNCSSS*SLSCSRLVACPRDL Trigger: GAGGTCTCTGGGGCAGGCCACCAAGCGGCTACAGGACAAGGAGCAGGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGGTCAACCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | CTCCTCCAGGCTACAGCTGTACTTCTGCTCCCAGAACCGGATCTCTaGCTCACTGGACTCCAGCTGCTTCTCGATGGCCTGCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLQATAVLLLPEPDL*LTGLQLLLDGLQLP Trigger: GGGAAGCTGCAGGCCATCGAGAAGCAGCTGGAGTCCAGTGAGGCAGAGATCCGGTTCTGGGAGCAGAAGTACAGCTGTAGCCTGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS CCA 90 bp | AGGAATTCGGGCCACACTGTCCGAGGTGGGTCGCTCACTGAGAGATaGCCCAGTCCGACGCAAGATGAGCTGCACGTCACTAGCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: RNSGHTVRGGSLTER*PSPTQDELHVTSIL Trigger: CAGTATGCTAGTGACGTGCAGCTCATCTTGCGTCGGACTGGGCCATCTCTCAGTGAGCGACCCACCTCGGACAGTGTGGCCCGAATTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | GACCGCTCTCCATGGTGTGGATCTGGGCCAGGTAGTCCTTCAGCCTaGCTTCACAGTCTGTCACCTTCTGCCGTATCTCCTCCAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DRSPWCGSGPGSPSA*LHSLSPSAVSPPAD Trigger: ATCAGCTGGAGGAGATACGGCAGAAGGTGACAGACTGTGAAGGCAGGCTGAAGGACTACCTGGCCCAGATCCACACCATGGAGAGCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | CTCCTCATTGACCTGTGCCTCCTGAACTTCCCGGTGCAGTTTTTCTaGCTGGAGACCGCTCTCCATGGTGTGGATCTGGGCCAGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLIDLCLLNFPVQFF*LETALHGVDLGQVV Trigger: GACTACCTGGCCCAGATCCACACCATGGAGAGCGGTCTCCAGGCAGAAAAACTGCACCGGGAAGTTCAGGAGGCACAGGTCAATGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS GCA 90 bp | CCCGAGGAGACAGGGTTCTGTAGAATACGAAGATTACTGGGGAGCTaGCGGGATGAACCAGGTCGCTTCAGGGACCCAGACTGGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PEETGFCRIRRLLGS*RDEPGRFRDPDWNG Trigger: GCCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCCCGGCAGCTCCCCAGTAATCTTCGTATTCTACAGAACCCTGTCTCCTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS CCA 90 bp | CCTGAACTTCCCGGTGCAGTTTTTCTGCCTGGAGACCGCTCTCCATaGTGTGGATCTGGGCCAGGTAGTCCTTCAGCCTGCCTTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PELPGAVFLPGDRSP*CGSGPGSPSACLHS Trigger: ACTGTGAAGGCAGGCTGAAGGACTACCTGGCCCAGATCCACACCATGGAGAGCGGTCTCCAGGCAGAAAAACTGCACCGGGAAGTTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS TCA 90 bp | CGTTTTCCCAGAACTCTTCCTCCTCGATCTCCACGTCGTTTCTCTTaGTCCTCTGCTCCAGGCGGACAATCTCCTCCTCCAGGCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFPRTLPPRSPRRFS*SSAPGGQSPPPGYS Trigger: GCTGTAGCCTGGAGGAGGAGATTGTCCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGGAGATCGAGGAGGAAGAGTTCTGGGAAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGGGCTGTACCTGCCGCAGCTCTTaGGTCAACTGCTCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SADLFALTSSCVAAGLGCTCRSS*VNCSSS Trigger: GGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGGT...ACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS TCA 90 bp | TCCACAGCTCTAATGCCGTTCTCCAGCCTCAGGCTCTGCTGCCCTTaGAGGTCCATCTCCCCCTTGACCTTTTCGATCTTTCCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: STALMPFSSLRLCCP*RSISPLTFSIFPFT Trigger: GGTGAAAGGAAAGATCGAAAAGGTCAAGGGGGAGATGGACCTTCAAGGGCAGCAGAGCCTGAGGCTGGAGAACGGCATTAGAGCTGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTACCTGCCGCAGCTCTTaGGTCAACTGCTCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVGTDPLFSWHKLEDFTTCRSS*VNCSSS Trigger: GGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGGT...AGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCAATTCTCTTTCTTTCCACAGGGTCTCACACCAGACCCCAGGCTATCCTAGGCAGCACGGTGACTTaGGTCCCTGTCTGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CAILFLSTGSHTRPQAILGSTVT*VPVCWM Trigger: CATCCAGCAGACAGGGACCAAAGTCACCGTGCTGCC...TAGGATAGCCTGGGGTCTGGTGTGAGACCCTGTGGAAAGAAAGAGAATTGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCTTACAAGCAGCTGTGTaGCCGCAGGACTGGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQYLPIKTGLCLGSTQSILQAAV*PQDWAV Trigger: GACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAA...GATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS GCA 90 bp | CTTGACCTTTTCGATCTTTCCTTTCACCTCCTCCTCATTGACCTGTaGCTCCTGAACTTCCCGGTGCAGTTTTTCTGCCTGGAGACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLFDLSFHLLLIDL*LLNFPVQFFCLETA Trigger: AGCGGTCTCCAGGCAGAAAAACTGCACCGGGAAGTTCAGGAGGCACAGGTCAATGAGGAGGAGGTGAAAGGAAAGATCGAAAAGGTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGCAGGCTCTGCTGCCCTaGAAGGTCCATCTCCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVQLAQTGGFYCPWYLCWQALLP*KVHLPL Trigger: AAGGGGGAGATGGACCTTCAAGGGCAGCAGAGCCTG...CCAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATGGTACCTTTGCTGGGGCAGCACGGTGACTTaGGTCCCTGTCTGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SVQLAQTGGFYCPWYLCWGSTVT*VPVCWM Trigger: CATCCAGCAGACAGGGACCAAAGTCACCGTGCTGCC...CCAGCAAAGGTACCATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGTCCACGTCGTTTCTCTaGATCCTCTGCTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QTKALHSSCWTTCQYCEESTSFL*ILCSRR Trigger: CCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGGA...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGCGTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTAGGTCCATCTCCCCCTaGACCTTTTCGATCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGVGTDPLFSWHKLEDFTRSISP*TFSIFP Trigger: AGGAAAGATCGAAAAGGTCAAGGGGGAGATGGACCT...AGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCACGCCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | CGAGCTAGCCTCGCCACAGTATCTACCGATCAAGACAGGCTTGTGTTTGGGAAGTCTCTGCAGACCTTTTaGCACTTACAAGCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RASLATVSTDQDRLVFGKSLQTF*HLQAAV Trigger: CACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGAGA...CTTCCCAAACACAAGCCTGTCTTGATCGGTAGATACTGTGGCGAGGCTAGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAGGCTTTGCATTCCAGCTGCTGGACAACATGTCAATACTGCGAAGAGATGAACTGCTGGAGGTaGACCTGCCGCAGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTKALHSSCWTTCQYCEEMNCWR*TCRSSL Trigger: CAAAGAGCTGCGGCAGGTCAACCTCCAGCAGTTCAT...CTCTTCGCAGTATTGACATGTTGTCCAGCAGCTGGAATGCAAAGCCTTTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGACCTTTTTGCACTTACAAGCAGCTGTGTTGCCGCAGGACTGGGCTGTCTGAACTCAGTCTCTTaGCCTTTTCCAAAAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SADLFALTSSCVAAGLGCLNSVS*PFPKMS Trigger: GGACATTTTTGGAAAAGGCAAAGAGACTGAGTTCAG...ACAGCCCAGTCCTGCGGCAACACAGCTGCTTGTAAGTGCAAAAAGGTCTGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGTTTAATATACATTAAGCAGGCTCTGCTGCCCTaGAAGGTCCATCTCCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QDRLVFGKHTEHRLIYIKQALLP*KVHLPL Trigger: AAGGGGGAGATGGACCTTCAAGGGCAGCAGAGCCTG...CTTAATGTATATTAAACGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111704.8 |
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| CDS-3UTR CAA 90 bp | GTGGGAACAGACCCTCTGTTCAGTTGGCACAAACTGGAGGATTTTACTGTCCATCTGAACTCAGTCTCTTaGCCTTTTCCAAAAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: VGTDPLFSWHKLEDFTVHLNSVS*PFPKMS Trigger: GGACATTTTTGGAAAAGGCAAAGAGACTGAGTTCAG...ATGGACAGTAAAATCCTCCAGTTTGTGCCAACTGAACAGAGGGTCTGTTCCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS-3UTR CAA 90 bp | CAAGACAGGCTTGTGTTTGGGAAGCACACAGAGCATCGTTTAATATACATTAAGCTAGGTGAAGACTTCTaGTCTCTGCAGACCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: QDRLVFGKHTEHRLIYIKLGEDF*SLQTFL Trigger: CAAAAAGGTCTGCAGAGACAAGAAGTCTTCACCTAG...CTTAATGTATATTAAACGATGCTCTGTGTGCTTCCCAAACACAAGCCTGTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058538.7 |
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| CDS GCA 72 bp | TCCCAGAACCGGATCTCTGCCTCACTGGACTCCAGCTaGTTCTCGATGGCCTGCAGCTTCCCCGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SQNRISASLDSS*FSMACSFPVCS Trigger: GCTGCAGACGGGGAAGCTGCAGGCCATCGAGAAGCAGCTGGAGTCCAGTGAGGCAGAGATCCGGTTCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | ACCTGCCGCAGCTCTTTGGTCAACTGCTCTAGCTCCTaGTCCTTGTCCTGTAGCCGCTTGGTGGCCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TCRSSLVNCSSS*SLSCSRLVACP Trigger: GGGGCAGGCCACCAAGCGGCTACAGGACAAGGAGCAGGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CCA 72 bp | GGCCACACTGTCCGAGGTGGGTCGCTCACTGAGAGATaGCCCAGTCCGACGCAAGATGAGCTGCACGTCACT | + |
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Preference number: 6 (lower is better) Translates to: GHTVRGGSLTER*PSPTQDELHVT Trigger: AGTGACGTGCAGCTCATCTTGCGTCGGACTGGGCCATCTCTCAGTGAGCGACCCACCTCGGACAGTGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | TCTGCCTCACTGGACTCCAGCTGCTTCTCGATGGCCTaGAGCTTCCCCGTCTGCAGCCGGATCAGCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SASLDSSCFSMA*SFPVCSRISLF Trigger: GAAAAGGCTGATCCGGCTGCAGACGGGGAAGCTGCAGGCCATCGAGAAGCAGCTGGAGTCCAGTGAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CCA 72 bp | CCCGGTGCAGTTTTTCTGCCTGGAGACCGCTCTCCATaGTGTGGATCTGGGCCAGGTAGTCCTTCAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGAVFLPGDRSP*CGSGPGSPSAC Trigger: GCAGGCTGAAGGACTACCTGGCCCAGATCCACACCATGGAGAGCGGTCTCCAGGCAGAAAAACTGCACCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CCA 72 bp | TGCCGGGATGAACCAGGTCGCTTCAGGGACCCAGACTaGAATGGCGCCTCTGTCTCTATGTCTGCCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: CRDEPGRFRDPD*NGASVSMSACE Trigger: CTCGCAGGCAGACATAGAGACAGAGGCGCCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCCCGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | GACCTGTGCCTCCTGAACTTCCCGGTGCAGTTTTTCTaGCTGGAGACCGCTCTCCATGGTGTGGATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DLCLLNFPVQFF*LETALHGVDLG Trigger: GCCCAGATCCACACCATGGAGAGCGGTCTCCAGGCAGAAAAACTGCACCGGGAAGTTCAGGAGGCACAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CAA 72 bp | AACTGCTCTAGCTCCTGCTCCTTGTCCTGTAGCCGCTaGGTGGCCTGCCCCAGAGACCTCTCCACAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: NCSSSCSLSCSR*VACPRDLSTAL Trigger: TAGAGCTGTGGAGAGGTCTCTGGGGCAGGCCACCAAGCGGCTACAGGACAAGGAGCAGGAGCTAGAGCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | GCTACAGCTGTACTTCTGCTCCCAGAACCGGATCTCTaGCTCACTGGACTCCAGCTGCTTCTCGATGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ATAVLLLPEPDL*LTGLQLLLDGL Trigger: CAGGCCATCGAGAAGCAGCTGGAGTCCAGTGAGGCAGAGATCCGGTTCTGGGAGCAGAAGTACAGCTGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | TGCTGGAGGTTGACCTGCCGCAGCTCTTTGGTCAACTaGTCTAGCTCCTGCTCCTTGTCCTGTAGCCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CWRLTCRSSLVN*SSSCSLSCSRL Trigger: CAAGCGGCTACAGGACAAGGAGCAGGAGCTAGAGCAGTTGACCAAAGAGCTGCGGCAGGTCAACCTCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | CCATGGTGTGGATCTGGGCCAGGTAGTCCTTCAGCCTaGCTTCACAGTCTGTCACCTTCTGCCGTATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PWCGSGPGSPSA*LHSLSPSAVSP Trigger: AGGAGATACGGCAGAAGGTGACAGACTGTGAAGGCAGGCTGAAGGACTACCTGGCCCAGATCCACACCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CCA 72 bp | CCGAGGAGACAGGGTTCTGTAGAATACGAAGATTACTaGGGAGCTGCCGGGATGAACCAGGTCGCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PRRQGSVEYEDY*GAAGMNQVASG Trigger: CCCTGAAGCGACCTGGTTCATCCCGGCAGCTCCCCAGTAATCTTCGTATTCTACAGAACCCTGTCTCCTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | ACAGGGTTCTGTAGAATACGAAGATTACTGGGGAGCTaGCGGGATGAACCAGGTCGCTTCAGGGACCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TGFCRIRRLLGS*RDEPGRFRDPD Trigger: GTCTGGGTCCCTGAAGCGACCTGGTTCATCCCGGCAGCTCCCCAGTAATCTTCGTATTCTACAGAACCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CAA 72 bp | CAGAACTCTTCCTCCTCGATCTCCACGTCGTTTCTCTaGATCCTCTGCTCCAGGCGGACAATCTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QNSSSSISTSFL*ILCSRRTISSS Trigger: GGAGGAGGAGATTGTCCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGGAGATCGAGGAGGAAGAGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CAA 90 bp | TCGTTTTCCCAGAACTCTTCCTCCTCGATCTCCACGTCGTTTCTCTaGATCCTCTGCTCCAGGCGGACAATCTCCTCCTCCAGGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: SFSQNSSSSISTSFL*ILCSRRTISSSRLQ Trigger: CTGTAGCCTGGAGGAGGAGATTGTCCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGGAGATCGAGGAGGAAGAGTTCTGGGAAAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS TCA 72 bp | AGAACTCTTCCTCCTCGATCTCCACGTCGTTTCTCTTaGTCCTCTGCTCCAGGCGGACAATCTCCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RTLPPRSPRRFS*SSAPGGQSPPP Trigger: TGGAGGAGGAGATTGTCCGCCTGGAGCAGAGGATCAAGAGAAACGACGTGGAGATCGAGGAGGAAGAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | TCACTGAGAGATGGCCCAGTCCGACGCAAGATGAGCTaGACGTCACTAGCATACTGCCCCCACTTGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLRDGPVRRKMS*TSLAYCPHLFK Trigger: TTTGAACAAGTGGGGGCAGTATGCTAGTGACGTGCAGCTCATCTTGCGTCGGACTGGGCCATCTCTCAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS CCA 72 bp | CGACCTATAGCTTGGGCTAAGGCTATTACAACCTCCTaGCAAGTTGTGACTTCCGTGACGCCACAGACGATC | + |
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Preference number: 6 (lower is better) Translates to: RPIAWAKAITTS*QVVTSVTPQTI Trigger: GATCGTCTGTGGCGTCACGGAAGTCACAACTTGCCAGGAGGTTGTAATAGCCTTAGCCCAAGCTATAGGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 ENSMUST00000140966.2 |
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| CDS GCA 72 bp | TTCAAAGACACGATGGGGTTTTCATGCGGTGCCAAGTaGCGCTCAGTGTCTCTCCATTTCTCTATCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: FKDTMGFSCGAK*RSVSLHFSIRV Trigger: CACCCTGATAGAGAAATGGAGAGACACTGAGCGGCACTTGGCACCGCATGAAAACCCCATCGTGTCTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 ENSMUST00000140966.2 |
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| CDS GCA 72 bp | TTCGATCTTTCCTTTCACCTCCTCCTCATTGACCTGTaGCTCCTGAACTTCCCGGTGCAGTTTTTCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FDLSFHLLLIDL*LLNFPVQFFCL Trigger: CAGGCAGAAAAACTGCACCGGGAAGTTCAGGAGGCACAGGTCAATGAGGAGGAGGTGAAAGGAAAGATCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 |
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| CDS GCA 72 bp | CCACTTGTTCAAAGACACGATGGGGTTTTCATGCGGTaGCAAGTGCCGCTCAGTGTCTCTCCATTTCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: PLVQRHDGVFMR*QVPLSVSPFLY Trigger: ATAGAGAAATGGAGAGACACTGAGCGGCACTTGGCACCGCATGAAAACCCCATCGTGTCTTTGAACAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032388.5 ENSMUST00000111704.8 ENSMUST00000140966.2 |
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