Pregenerated sensors for RASSF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038618Ensembl transcript IDs: ENSMUST00000046890.12, ENSMUST00000127613.2, ENSMUST00000133763.8, ENSMUST00000141804.2, ENSMUST00000148975.3, ENSMUST00000153081.2, ENSMUST00000209500.2, ENSMUST00000210993.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGGCATCCAGGGCCTCCAGCCGGGCAGCATGCTCAGCAGTAGCTaGACTCAGTGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LGIQGLQPGSMLSSS*TQCLQACLSLALPG Trigger: GCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGGCTGGAGGCCCTGGATGCCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 90 bp | CAGGGCCTCCAGCCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTaGTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCG | + |
|
Preference number: 1 (lower is better) Translates to: QGLQPGSMLSSSCTQ*LQACLSLALPGLFS Trigger: CGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGGCTGGAGGCCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 90 bp | CCTGGGTGGCTAGGTCCTGGCGTAGGCGCTCAGCAGCAGACGCTGTaGCTGAAGGAGGACCAGGGGCCTCAGCAGCCAGTCGAAGCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: PGWLGPGVGAQQQTL*LKEDQGPQQPVEAL Trigger: CAGAGCTTCGACTGGCTGCTGAGGCCCCTGGTCCTCCTTCAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 90 bp | GCCTCCAGCCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTGCTTaGAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGC | + |
|
Preference number: 1 (lower is better) Translates to: ASSRAACSAVAALSA*RRACPSRSLACSRC Trigger: GCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGGCTGGAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 90 bp | CCAAGGCCAAGGTGCCCTGCATCTCCAGACTATGCCGCTCCTGGGTaGCTAGGTCCTGGCGTAGGCGCTCAGCAGCAGACGCTGTGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: PRPRCPASPDYAAPG*LGPGVGAQQQTLWL Trigger: CAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCACCTTGGCCTTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 90 bp | GGTCAGTGCTTTGCGTGGCTCACGGCCTGGTATCGCCGATGGCTTTaGGGGGAGGCTGGCACGAACTGGGCATCGTTCTGGGGGTGGACA | + |
|
Preference number: 1 (lower is better) Translates to: GQCFAWLTAWYRRWL*GEAGTNWASFWGWT Trigger: TGTCCACCCCCAGAACGATGCCCAGTTCGTGCCAGCCTCCCCCCAAAGCCATCGGCGATACCAGGCCGTGAGCCACGCAAAGCACTGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 90 bp | GTGCCCTGCATCTCCAGACTATGCCGCTCCTGGGTGGCTAGGTCCTaGCGTAGGCGCTCAGCAGCAGACGCTGTGGCTGAAGGAGGACCA | + |
|
Preference number: 1 (lower is better) Translates to: VPCISRLCRSWVARS*RRRSAADAVAEGGP Trigger: TGGTCCTCCTTCAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 90 bp | GCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTaGAGCTCTTGCTCCCAGAAGGCCTCATGGCCTAGCTCCTCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: ACRRACPSRSLACSR*SSCSQKASWPSSSV Trigger: CACTGAGGAGCTAGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 90 bp | CCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTGCTTGCAGGCGTaGCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: PGSMLSSSCTQCLQA*LSLALPGLFSLQLL Trigger: CAAGAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR TCA 90 bp | CCAGCTGTGGAGGTGGCGGCGGCAACGCAGCCCCTGTCTGCTGGATaGACTGTTGCAGGTTGCACTGACGGAGTTCCCTGTTCAGCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: PAVEVAAATQPLSAG*TVAGCTDGVPCSAP Trigger: AGGAGCTGAACAGGGAACTCCGTCAGTGCAACCTGCAACAGTTCATCCAGCAGACAGGGGCTGCGTTGCCGCCGCCACCTCCACAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 90 bp | TGGCCTAGCTCCTCAGTGTTCCTCTGTATCCTGAGTTCTAGGTCCTaGAGGTCTGCAAAGCCGTCTGGTATGGGTCCTACCAGGGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: WPSSSVFLCILSSRS*RSAKPSGMGPTRAA Trigger: TGCAGCCCTGGTAGGACCCATACCAGACGGCTTTGCAGACCTGCAGGACCTAGAACTCAGGATACAGAGGAACACTGAGGAGCTAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 90 bp | TCCCTGGCTTGTTCTCGTTGCAGCTCTTGCTCCCAGAAGGCCTCATaGCCTAGCTCCTCAGTGTTCCTCTGTATCCTGAGTTCTAGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: SLACSRCSSCSQKAS*PSSSVFLCILSSRS Trigger: GGACCTAGAACTCAGGATACAGAGGAACACTGAGGAGCTAGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR TCA 90 bp | CTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTaGAAGACTAGGATAACAGTTGCCAGCACTCCTCCCACCCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: LNCTHLLLLQRTWEI*KTRITVASTPPTLK Trigger: CTTCAGGGTGGGAGGAGTGCTGGCAACTGTTATCCTAGTCTTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR TCA 90 bp | GTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTaGACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTT | + |
|
Preference number: 1 (lower is better) Translates to: VHTFLLSMPLGPAKF*TVPIYYFFRGLGRF Trigger: AAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR GCA 90 bp | CACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTCCATaGCTTTGGGGCCTGCTAAGTTCTGAACTGTACCCATTTATTACT | + |
|
Preference number: 1 (lower is better) Translates to: HIHRRNTLSILFFSP*LWGLLSSELYPFIT Trigger: AGTAATAAATGGGTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR CCA 90 bp | CACAGGAGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTaGGGCCTGCTAAGTTCTGAACTGTACCCATTTATTACTTCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: HRRNTLSILFFSPCL*GLLSSELYPFITSS Trigger: TGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR CAA 90 bp | GGCCTCCAGCCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTGCTaGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GLQPGSMLSSSCTQC*QACLSLALPGLFSL Trigger: CAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGGCTGGAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCTCGGCCTGGGCTCCCACTaGACACTCCTGTGGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CLQACLSLALPGLFSLQLGLGSH*TLLWQQ Trigger: CTGCTGCCACAGGAGTGTCCAGTGGGAGCCCAGGCC...GAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTCCAGACTATGCCGCTCCTGGGTGGCTAGGTCCTGGCGTAGGCGCTCAGAGCCAGTCGAAGCTCTaGCTCCAGGGCACAGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASPDYAAPGWLGPGVGAQSQSKL*LQGTGL Trigger: CAGGCCTGTGCCCTGGAGGCAGAGCTTCGACTGGCT...CTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTGGCTGAAGGAGGACCAGGGGCCTCAGCAGCCAGTCGAAGCTCTGCCTCCAGTAGCTGCACTCAGTaGTTGCAGGCGTGCCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: AVAEGGPGASAASRSSASSSCTQ*LQACLS Trigger: GGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACT...GGAGGCAGAGCTTCGACTGGCTGCTGAGGCCCCTGGTCCTCCTTCAGCCACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCTATCGCCGATGGCTTTaGGGGGAGGCTGGCACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SACRRACPSRSLACSRCSYRRWL*GEAGTN Trigger: GTTCGTGCCAGCCTCCCCCCAAAGCCATCGGCGATA...GCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTCCAGCCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTGCTTGCAGGCGAGGCTCAGGAATAGATaGGCTGGGGACCAGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLQPGSMLSSSCTQCLQARLRNR*AGDQLG Trigger: CCCAAGCTGGTCCCCAGCCCATCTATTCCTGAGCCT...CGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGGCTGGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCTCGGGTCCTACCAGGGCTaGAGGCTCAGGAATAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: CLQACLSLALPGLFSLQLGSYQG*RLRNRW Trigger: CCATCTATTCCTGAGCCTGCAGCCCTGGTAGGACCC...GAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGACCAGGGGCCTCAGCAGCCAGTCGAAGCTCTGCCTCCAGGGCACAGGCCTTGTTCCTCTGTATCCTaGGTTCTAGGTCCTGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: EDQGPQQPVEALPPGHRPCSSVS*VLGPAG Trigger: ACCTGCAGGACCTAGAACTCAGGATACAGAGGAACA...AGGCCTGTGCCCTGGAGGCAGAGCTTCGACTGGCTGCTGAGGCCCCTGGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCTCCTGAGTTCTAGGTCCTaGAGGTCTGCAAAGCCGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CLQACLSLALPGLFSLQLLSSRS*RSAKPS Trigger: AGACGGCTTTGCAGACCTGCAGGACCTAGAACTCAG...GAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGTTGCAGCTCTTGCTCCCAGAAGGCCTCATGGCCTAGCTCCTCAGTGTTCGAGGCTGGCACGAACTaGGCATCGTTCTGGGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRCSSCSQKASWPSSSVFEAGTN*ASFWGW Trigger: CCACCCCCAGAACGATGCCCAGTTCGTGCCAGCCTC...GAACACTGAGGAGCTAGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCCAGACTATGCCGCTCCTGGGTGGCTAGGTCCTGGCGTAGGCGCTCAGCATCCCAGAAGGCCTCATaGCCTAGCTCCTCAGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ISRLCRSWVARSWRRRSASQKAS*PSSSVF Trigger: GAACACTGAGGAGCTAGGCCATGAGGCCTTCTGGGA...TGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CAA 90 bp | CCTACCAGGGCTGCAGGCTCAGGAATAGATGGGCTGGGGACCAGCTaGGGACATCTAAGGTTGAAGGTCAGTGCTTTGCGTGGCTCACGG | + |
|
Preference number: 2 (lower is better) Translates to: PTRAAGSGIDGLGTS*GHLRLKVSALRGSR Trigger: CCGTGAGCCACGCAAAGCACTGACCTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCCATCTATTCCTGAGCCTGCAGCCCTGGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCATCGTTCTGGGGGTGGACAGTTGTCTGAGGAGGGCCTTCCAGACAGGCTACACTGGACACTCCTGTaGCAGCAGCTGTCGTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GHRSGGGQLSEEGLPDRLHWTLL*QQLSFL Trigger: AAGGAACGACAGCTGCTGCCACAGGAGTGTCCAGTG...TAGCCTGTCTGGAAGGCCCTCCTCAGACAACTGTCCACCCCCAGAACGATGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGACCAGGGGCCTCAGCAGCCAGTCGAAGCTCTGCCTCCAGGGCACAGGCCTCAAACTGAACATCATTaGCAAACTGTCCACAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EDQGPQQPVEALPPGHRPQTEHH*QTVHKW Trigger: CCACTTGTGGACAGTTTGCCAATGATGTTCAGTTTG...AGGCCTGTGCCCTGGAGGCAGAGCTTCGACTGGCTGCTGAGGCCCCTGGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAATAGATGGGCTGGGGACCAGCTTGGGACATCTAAGGTTGAAGGTCAGTGCTTGTCCACAAGTGGCCTaGGCTCCCACTGGACACTCC | + |
|
Preference number: 2 (lower is better) Translates to: GIDGLGTSLGHLRLKVSACPQVA*APTGHS Trigger: GGAGTGTCCAGTGGGAGCCCAGGCCACTTGTGGACA...AGCACTGACCTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCCATCTATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGCTCATCCCAGCTGTaGTGGCTCATCTGTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGGSSQL*WLICLH Trigger: ATGAAGACAGATGAGCCAGCACAGCTGGGATGAGCC...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAATAGATGGGCTGGGGACCAGCTTGGGACATCTAAGGTTGAAGGTCAGTGCTCGCCTCAGGACAAACTaGACATCATTGGCAAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: GIDGLGTSLGHLRLKVSARLRTN*TSLANC Trigger: ACAGTTTGCCAATGATGTTCAGTTTGTCCTGAGGCG...AGCACTGACCTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCCATCTATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATAGCTCATCTGTCTTCATaGCCCCTACTTGGGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIAHLSS*PLLGQE Trigger: TTCCTGCCCAAGTAGGGGTCATGAAGACAGATGAGC...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTGCTCATCTGTCTTCATaGCCCCTACTTGGGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSAHLSS*PLLGQE Trigger: TTCCTGCCCAAGTAGGGGTCATGAAGACAGATGAGC...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR-3UTR GCA 90 bp | GTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTGGCTCATCCCAGCTGTaGTGGCTCATCTGTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VHSRHIHRRNTLSILFFSGSSQL*WLICLH Trigger: ATGAAGACAGATGAGCCAGCACAGCTGGGATGAGCC...AGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR GCA 72 bp | CAGCCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTaGTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QPGSMLSSSCTQ*LQACLSLALPG Trigger: GCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 72 bp | CTAGGTCCTGGCGTAGGCGCTCAGCAGCAGACGCTGTaGCTGAAGGAGGACCAGGGGCCTCAGCAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGPGVGAQQQTL*LKEDQGPQQPV Trigger: GACTGGCTGCTGAGGCCCCTGGTCCTCCTTCAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | CGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTGCTTaGAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RAACSAVAALSA*RRACPSRSLAC Trigger: ACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | CTCACCAAGGCCAAGGTGCCCTGCATCTCCAGACTATaGCGCTCCTGGGTGGCTAGGTCCTGGCGTAGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: LTKAKVPCISRL*RSWVARSWRRR Trigger: GCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCACCTTGGCCTTGGTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 72 bp | AGGTGCCCTGCATCTCCAGACTATGCCGCTCCTGGGTaGCTAGGTCCTGGCGTAGGCGCTCAGCAGCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: RCPASPDYAAPG*LGPGVGAQQQT Trigger: CGTCTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 72 bp | GCCAAGGTGCCCTGCATCTCCAGACTATGCCGCTCCTaGGTGGCTAGGTCCTGGCGTAGGCGCTCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AKVPCISRLCRS*VARSWRRRSAA Trigger: TGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCACCTTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 72 bp | TGGGCCTGCAGAGCGTGCTCAGCAGCCTCCAGAGCCTaGCTCACCAAGGCCAAGGTGCCCTGCATCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WACRACSAASRA*LTKAKVPCISR Trigger: TCTGGAGATGCAGGGCACCTTGGCCTTGGTGAGCCAGGCTCTGGAGGCTGCTGAGCACGCTCTGCAGGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | CGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTaGAGCTCTTGCTCCCAGAAGGCCTCATGGCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RACPSRSLACSR*SSCSQKASWPS Trigger: GCTAGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 72 bp | TTTGCGTGGCTCACGGCCTGGTATCGCCGATGGCTTTaGGGGGAGGCTGGCACGAACTGGGCATCGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FAWLTAWYRRWL*GEAGTNWASFW Trigger: CCAGAACGATGCCCAGTTCGTGCCAGCCTCCCCCCAAAGCCATCGGCGATACCAGGCCGTGAGCCACGCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGACTATGCCGCTCCTGGGTGGCTAGGTCCTGGCGTAGGCGCTCAGCAGCAGGGGCTGGGGACCAGCTaGGGACATCTAAGGTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PDYAAPGWLGPGVGAQQQGLGTS*GHLRLK Trigger: CTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCC...CTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR TCA 72 bp | GAGGTGGCGGCGGCAACGCAGCCCCTGTCTGCTGGATaGACTGTTGCAGGTTGCACTGACGGAGTTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVAAATQPLSAG*TVAGCTDGVPC Trigger: ACAGGGAACTCCGTCAGTGCAACCTGCAACAGTTCATCCAGCAGACAGGGGCTGCGTTGCCGCCGCCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | CCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCTCTTaGTCCCAGAAGGCCTCATGGCCTAGCTCCTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PSRSLACSRCSS*SQKASWPSSSV Trigger: CACTGAGGAGCTAGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CCA 72 bp | TCAGTGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTaGCTTGTTCTCGTTGCAGCTCTTGCTCCCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVLAGVPVPRAP*LVLVAALAPRR Trigger: CCTTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | GTCTGCAAAGCCGTCTGGTATGGGTCCTACCAGGGCTaGAGGCTCAGGAATAGATGGGCTGGGGACCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VCKAVWYGSYQG*RLRNRWAGDQL Trigger: AAGCTGGTCCCCAGCCCATCTATTCCTGAGCCTGCAGCCCTGGTAGGACCCATACCAGACGGCTTTGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | ATACTCTCCTGCTATCCAGGCGGCTCATCCCAGCTGTaGTGGCTCATCTGTCTTCATGACCCCTACTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILSCYPGGSSQL*WLICLHDPYLG Trigger: GCCCAAGTAGGGGTCATGAAGACAGATGAGCCAGCACAGCTGGGATGAGCCGCCTGGATAGCAGGAGAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAGATGGGCTGGGGACCAGCTTGGGACATCTAAGGTTGAAGGTCAGTGCTTTTCTGGGGGTGGACAGTaGTCTGAGGAGGGCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NRWAGDQLGTSKVEGQCFSGGGQ*SEEGLP Trigger: TGGAAGGCCCTCCTCAGACAACTGTCCACCCCCAGA...AAAGCACTGACCTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCCATCTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR GCA 72 bp | TCCTCAGTGTTCCTCTGTATCCTGAGTTCTAGGTCCTaGAGGTCTGCAAAGCCGTCTGGTATGGGTCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: SSVFLCILSSRS*RSAKPSGMGPT Trigger: GGTAGGACCCATACCAGACGGCTTTGCAGACCTGCAGGACCTAGAACTCAGGATACAGAGGAACACTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR TCA 72 bp | TTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTaGACTGTACCCATTTATTACTTCTTCAGAGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: FLLSMPLGPAKF*TVPIYYFFRGL Trigger: AAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR CAA 72 bp | CCGGGCAGCATGCTCAGCAGTAGCTGCACTCAGTGCTaGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSMLSSSCTQC*QACLSLALPGL Trigger: CAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCATGCTGCCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CAA 72 bp | TGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTaGTTCTCGTTGCAGCTCTTGCTCCCAGAAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLQACLSLALPG*FSLQLLLPEGL Trigger: GAGGCCTTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGACTATGCCGCTCCTGGGTGGCTAGGTCCTGGCGTAGGCGCTCAGCAGCAGCAGGTGGTCTGTTCTaGGACCCCACAGACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLCRSWVARSWRRRSAAAGGLF*DPTDHP Trigger: AGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGC...TGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR CCA 90 bp | GAGGACCAGGGGCCTCAGCAGCCAGTCGAAGCTCTGCCTCCAGGGCACAGGCCTCCACTTCTTGGCAGGTaGTCTGTTCTGAGACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDQGPQQPVEALPPGHRPPLLGR*SVLRPH Trigger: GTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGG...AGGCCTGTGCCCTGGAGGCAGAGCTTCGACTGGCTGCTGAGGCCCCTGGTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| 3UTR CAA 72 bp | CGGCGGCAACGCAGCCCCTGTCTGCTGGATGAACTGTaGCAGGTTGCACTGACGGAGTTCCCTGTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRQRSPCLLDEL*QVALTEFPVQL Trigger: GAGCTGAACAGGGAACTCCGTCAGTGCAACCTGCAACAGTTCATCCAGCAGACAGGGGCTGCGTTGCCGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTGCAGGCGTGCCTGTCCCTCGCGCTCCCTGGCTTGTTCTCGTTGCAGCAGACCTTCAGCTCCATaGCCACAAGCTCCAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SACRRACPSRSLACSRCSRPSAP*PQAPRP Trigger: TGGTCTTGGAGCTTGTGGCCATGGAGCTGAAGGTCT...GCTGCAACGAGAACAAGCCAGGGAGCGCGAGGGACAGGCACGCCTGCAAGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGTTGCAGCTCTTGCTCCCAGAAGGCCTCATGGCCTAGCTCCTCAGTGTTCCCACAGACCACCCTCTaGATGCCGTCCACCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SRCSSCSQKASWPSSSVFPQTTL*MPSTQT Trigger: GGTCTGGGTGGACGGCATCCAGAGGGTGGTCTGTGG...GAACACTGAGGAGCTAGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR CCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGCCTGGGCTCCCACTaGACACTCCTGTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGGLGSH*TLLWQQ Trigger: CTGCTGCCACAGGAGTGTCCAGTGGGAGCCCAGGCC...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGCAGCCTCCAGAGCCTaGCTCACCAAGGCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGAASRA*LTKAKV Trigger: CACCTTGGCCTTGGTGAGCCAGGCTCTGGAGGCTGC...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCATCCAGCTGTGGAGGTaGCGGCGGCAACGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LALGKESCDHTLLLSRRLIQLWR*RRQRSP Trigger: GGGGCTGCGTTGCCGCCGCCACCTCCACAGCTGGAT...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGTCCTACCAGGGCTGCAGGCTCAGGAATAGATGGGCTGGGGACCAGCTTGGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MGPTRAAGSGIDGLGTSLAMTTS*QVVCSE Trigger: CTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGC...CAAGCTGGTCCCCAGCCCATCTATTCCTGAGCCTGCAGCCCTGGTAGGACCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR CCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGATGTCCACAAGTGGCCTaGGCTCCCACTGGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGCPQVA*APTGHS Trigger: GGAGTGTCCAGTGGGAGCCCAGGCCACTTGTGGACA...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGATATCGCCGATGGCTTTaGGGGGAGGCTGGCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGYRRWL*GEAGTN Trigger: GTTCGTGCCAGCCTCCCCCCAAAGCCATCGGCGATA...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATATCCAGGGCACAGGCCTaGGCATCCAGGGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGISRAQA*ASRASS Trigger: GCTGGAGGCCCTGGATGCCCAGGCCTGTGCCCTGGA...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR CAA 72 bp | ATAGATGGGCTGGGGACCAGCTTGGGACATCTAAGGTaGAAGGTCAGTGCTTTGCGTGGCTCACGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDGLGTSLGHLR*KVSALRGSRPG Trigger: ACCAGGCCGTGAGCCACGCAAAGCACTGACCTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCCATCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCCCACAGACCACCCTCTaGATGCCGTCCACCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LALGKESCDHTLLLSRRLPQTTL*MPSTQT Trigger: GGTCTGGGTGGACGGCATCCAGAGGGTGGTCTGTGG...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCGCAGCCTCCAGAGCCTaGCTCACCAAGGCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALGKESCDHTLLLSRRLAASRA*LTKAKV Trigger: CACCTTGGCCTTGGTGAGCCAGGCTCTGGAGGCTGC...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| 3UTR CAA 72 bp | GCTGCAGGCTCAGGAATAGATGGGCTGGGGACCAGCTaGGGACATCTAAGGTTGAAGGTCAGTGCTTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGSGIDGLGTS*GHLRLKVSALR Trigger: ACGCAAAGCACTGACCTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCCATCTATTCCTGAGCCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS-3UTR TCA 90 bp | TCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGAACTGTACAGCAGACGCTGTGGCTaGAGGAGGACCAGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILFFSPCLWGLLSSELYSRRCG*RRTRGL Trigger: GAGGCCCCTGGTCCTCCTTCAGCCACAGCGTCTGCT...GTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAATGCTCAGCAGTAGCTaGACTCAGTGCTTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGMLSSS*TQCLQA Trigger: CGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCAT...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATATATGCCGCTCCTGGGTaGCTAGGTCCTGGCGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIYAAPG*LGPGVG Trigger: GCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATA...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATAGCAGGTGGTCTGTTCTaGGACCCCACAGACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIAGGLF*DPTDHP Trigger: AGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGC...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGGCCTGGGCTCCCACTaGACACTCCTGTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSGLGSH*TLLWQQ Trigger: CTGCTGCCACAGGAGTGTCCAGTGGGAGCCCAGGCC...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGAACTGTACGAGGCTGGCACGAACTaGGCATCGTTCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SILFFSPCLWGLLSSELYEAGTN*ASFWGW Trigger: CCACCCCCAGAACGATGCCCAGTTCGTGCCAGCCTC...GTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTGAGGCTGGCACGAACTaGGCATCGTTCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNTLSILFFSPCLWGLLSEAGTN*ASFWGW Trigger: CCACCCCCAGAACGATGCCCAGTTCGTGCCAGCCTC...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTATGCCGCTCCTGGGTaGCTAGGTCCTGGCGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNTLSILFFSPCLWGLLSYAAPG*LGPGVG Trigger: GCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATA...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATAAGGCTCAGGAATAGATaGGCTGGGGACCAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIRLRNR*AGDQLG Trigger: CCCAAGCTGGTCCCCAGCCCATCTATTCCTGAGCCT...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCTTCCCAGAATTACTCTaGCCTGTGTGCTGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LALGKESCDHTLLLSRRLFPELL*PVCWGW Trigger: CCATCCCCAGCACACAGGTCAGAGTAATTCTGGGAA...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTGGGTCCTACCAGGGCTaGAGGCTCAGGAATAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RNTLSILFFSPCLWGLLSGSYQG*RLRNRW Trigger: CCATCTATTCCTGAGCCTGCAGCCCTGGTAGGACCC...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATACCACTTCTTGGCAGGTaGTCTGTTCTGAGACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIPLLGR*SVLRPH Trigger: GTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGG...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTTGTCCACAAGTGGCCTaGGCTCCCACTGGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSCPQVA*APTGHS Trigger: GGAGTGTCCAGTGGGAGCCCAGGCCACTTGTGGACA...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGTCCAGGGCACAGGCCTaGGCATCCAGGGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLSRAQA*ASRASS Trigger: GCTGGAGGCCCTGGATGCCCAGGCCTGTGCCCTGGA...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTCTGGACACTAGGATGTaGCTCTGGGGGACTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSLDTRM*LWGTPW Trigger: CCAGGGAGTCCCCCAGAGCCACATCCTAGTGTCCAG...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTAGGAGCTCTGCCTCATaGGGGGAACCTCGGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSRSSAS*GEPRDS Trigger: TGAGTCCCGAGGTTCCCCCCATGAGGCAGAGCTCCT...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATAAGACAGAAGGTCCTGTaGGGAAAGCAGGTCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIRQKVL*GKQVSR Trigger: TCGGCTGACCTGCTTTCCCCACAGGACCTTCTGTCT...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTGCAGGTGGTCTGTTCTaGGACCCCACAGACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSAGGLF*DPTDHP Trigger: AGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGC...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTGTTGCAGGTTGCACTaGCGGAGTTCCCTGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNTLSILFFSPCLWGLLSCCRLH*RSSLFS Trigger: GCTGAACAGGGAACTCCGTCAGTGCAACCTGCAACA...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTCCCCTGTCTGCTGGATaGACTGTTGCAGGTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RNTLSILFFSPCLWGLLSPLSAG*TVAGCT Trigger: AGTGCAACCTGCAACAGTTCATCCAGCAGACAGGGG...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | TCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGAACTGTACTCTCGTTGCAGCTCTTaGTCCCAGAAGGCCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SILFFSPCLWGLLSSELYSRCSS*SQKASW Trigger: CCATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGA...GTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LALGKESCDHTLLLSRRLAMTTS*QVVCSE Trigger: CTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGC...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTTATCGCCGATGGCTTTaGGGGGAGGCTGGCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSYRRWL*GEAGTN Trigger: GTTCGTGCCAGCCTCCCCCCAAAGCCATCGGCGATA...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTAGGCTCAGGAATAGATaGGCTGGGGACCAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSRLRNR*AGDQLG Trigger: CCCAAGCTGGTCCCCAGCCCATCTATTCCTGAGCCT...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGAACTGTACGCAGCCCCTGTCTGCTaGATGAACTGTTGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SILFFSPCLWGLLSSELYAAPVC*MNCCRL Trigger: CAACCTGCAACAGTTCATCCAGCAGACAGGGGCTGC...GTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAAAATCCAGCTGTGGAGGTaGCGGCGGCAACGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSELYPFITSSEDLGDLKIQLWR*RRQRSP Trigger: GGGGCTGCGTTGCCGCCGCCACCTCCACAGCTGGAT...TTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GGCGAGGAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGAGTTCTCCTCTATTTaGAGACAGAAGGTCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEEGSTHTVRYIAGTYTGEFSSI*RQKVLC Trigger: ACACAGGACCTTCTGTCTCCAAATAGAGGAGAACTC...TCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTCCTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS-3UTR CCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTCCTCGGGACTCAGGCTaGACACTAGGATGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSPRDSG*TLGCGS Trigger: AGAGCCACATCCTAGTGTCCAGCCTGAGTCCCGAGG...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAAAAGCAGACGCTGTGGCTaGAGGAGGACCAGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSELYPFITSSEDLGDLKSRRCG*RRTRGL Trigger: GAGGCCCCTGGTCCTCCTTCAGCCACAGCGTCTGCT...TTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTTGTTGCAGGTTGCACTaGCGGAGTTCCCTGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSCCRLH*RSSLFS Trigger: GCTGAACAGGGAACTCCGTCAGTGCAACCTGCAACA...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTCCCCTGTCTGCTGGATaGACTGTTGCAGGTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSPLSAG*TVAGCT Trigger: AGTGCAACCTGCAACAGTTCATCCAGCAGACAGGGG...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | GTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTGGGTCCTACCAGGGCTaGAGGCTCAGGAATAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSRHIHRRNTLSILFFSGSYQG*RLRNRW Trigger: CCATCTATTCCTGAGCCTGCAGCCCTGGTAGGACCC...AGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTCTGAGTTCTAGGTCCTaGAGGTCTGCAAAGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNTLSILFFSPCLWGLLSLSSRS*RSAKPS Trigger: AGACGGCTTTGCAGACCTGCAGGACCTAGAACTCAG...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | GTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTAGTAGCTGCACTCAGTaGTTGCAGGCGTGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHSRHIHRRNTLSILFFSSSCTQ*LQACLS Trigger: GGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACT...AGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTATGCTCAGCAGTAGCTaGACTCAGTGCTTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSMLSSS*TQCLQA Trigger: CGCCTGCAAGCACTGAGTGCAGCTACTGCTGAGCAT...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAGCCAGTCGAAGCTCTaGCTCCAGGGCACAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLSQSKL*LQGTGL Trigger: CAGGCCTGTGCCCTGGAGGCAGAGCTTCGACTGGCT...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGAACTGTACAGACCTTCAGCTCCATaGCCACAAGCTCCAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SILFFSPCLWGLLSSELYRPSAP*PQAPRP Trigger: TGGTCTTGGAGCTTGTGGCCATGGAGCTGAAGGTCT...GTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGCACACATACAGTGAGGTACATAGCAGGCACATACACAGGAGGAATAGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSTHTVRYIAGTYTGGIAMTTS*QVVCSE Trigger: CTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGC...TATTCCTCCTGTGTATGTGCCTGCTATGTACCTCACTGTATGTGTGCTGCCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAAAAGCCAGTCGAAGCTCTaGCTCCAGGGCACAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSELYPFITSSEDLGDLKSQSKL*LQGTGL Trigger: CAGGCCTGTGCCCTGGAGGCAGAGCTTCGACTGGCT...TTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | GTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTAACGCAGCCCCTGTCTaGTGGATGAACTGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSRHIHRRNTLSILFFSNAAPV*WMNCCR Trigger: CCTGCAACAGTTCATCCAGCAGACAGGGGCTGCGTT...AGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCCACTTCTTGGCAGGTaGTCTGTTCTGAGACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSPLLGR*SVLRPH Trigger: GTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGG...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCACTGGACACTCCTGTaGCAGCAGCTGTCGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSHWTLL*QQLSFL Trigger: AAGGAACGACAGCTGCTGCCACAGGAGTGTCCAGTG...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTTCCCAGAAGGCCTCATaGCCTAGCTCCTCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSSQKAS*PSSSVF Trigger: GAACACTGAGGAGCTAGGCCATGAGGCCTTCTGGGA...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAGGAGCTCTGCCTCATaGGGGGAACCTCGGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLRSSAS*GEPRDS Trigger: TGAGTCCCGAGGTTCCCCCCATGAGGCAGAGCTCCT...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTTGTTCCTCTGTATCCTaGGTTCTAGGTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSCSSVS*VLGPAG Trigger: ACCTGCAGGACCTAGAACTCAGGATACAGAGGAACA...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTGAGTTCTAGGTCCTaGAGGTCTGCAAAGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSLSSRS*RSAKPS Trigger: AGACGGCTTTGCAGACCTGCAGGACCTAGAACTCAG...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCCAAACTGAACATCATTaGCAAACTGTCCACAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LALGKESCDHTLLLSRRLQTEHH*QTVHKW Trigger: CCACTTGTGGACAGTTTGCCAATGATGTTCAGTTTG...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTGAAGGTCCTGTGTGCTaGGGATGGTTCTATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSEGPVC*GWFYPA Trigger: AGCTGGATAGAACCATCCCCAGCACACAGGACCTTC...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAAACTGGACACTAGGATGTaGCTCTGGGGGACTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSELYPFITSSEDLGDLKLDTRM*LWGTPW Trigger: CCAGGGAGTCCCCCAGAGCCACATCCTAGTGTCCAG...TTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGCCTCGGGACTCAGGCTaGACACTAGGATGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLPRDSG*TLGCGS Trigger: AGAGCCACATCCTAGTGTCCAGCCTGAGTCCCGAGG...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTCGCCTCAGGACAAACTaGACATCATTGGCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLSILFFSPCLWGLLSSRLRTN*TSLANC Trigger: ACAGTTTGCCAATGATGTTCAGTTTGTCCTGAGGCG...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAAAAGTAGCTGCACTCAGTaGTTGCAGGCGTGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSELYPFITSSEDLGDLKSSCTQ*LQACLS Trigger: GGACAGGCACGCCTGCAAGCACTGAGTGCAGCTACT...TTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAACGCAGCCCCTGTCTaGTGGATGAACTGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLNAAPV*WMNCCR Trigger: CCTGCAACAGTTCATCCAGCAGACAGGGGCTGCGTT...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGCACTGGACACTCCTGTaGCAGCAGCTGTCGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLHWTLL*QQLSFL Trigger: AAGGAACGACAGCTGCTGCCACAGGAGTGTCCAGTG...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGGCAGCCCCTGTCTGCTaGATGAACTGTTGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLAAPVC*MNCCRL Trigger: CAACCTGCAACAGTTCATCCAGCAGACAGGGGCTGC...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGTGTTCCTCTGTATCCTaGGTTCTAGGTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLCSSVS*VLGPAG Trigger: ACCTGCAGGACCTAGAACTCAGGATACAGAGGAACA...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGAAAAGACCTTCAGCTCCATaGCCACAAGCTCCAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSELYPFITSSEDLGDLKRPSAP*PQAPRP Trigger: TGGTCTTGGAGCTTGTGGCCATGGAGCTGAAGGTCT...TTTCAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGCGCCTCAGGACAAACTaGACATCATTGGCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLRLRTN*TSLANC Trigger: ACAGTTTGCCAATGATGTTCAGTTTGTCCTGAGGCG...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | GTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCTCAAACTGAACATCATTaGCAAACTGTCCACAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSRHIHRRNTLSILFFSQTEHH*QTVHKW Trigger: CCACTTGTGGACAGTTTGCCAATGATGTTCAGTTTG...AGAGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGGAGTTCTCCTCTATTTaGAGACAGAAGGTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSELYPFITSSEDLGDLEFSSI*RQKVLW Trigger: CCACAGGACCTTCTGTCTCCAAATAGAGGAGAACTC...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209500.2 |
||
| CDS CCA 90 bp | GTGCCCTGCATCTCCAGACTATGCCGCTCCTGGGTGGCTAGGTCCTaGCGTAGGCGCTCAGCAGCAGACGCTGTGGCTATAGCTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPCISRLCRSWVARS*RRRSAADAVAIAWA Trigger: GGCCCAAGCTATAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148975.3 |
||
| CDS CCA 90 bp | CCAAGGCCAAGGTGCCCTGCATCTCCAGACTATGCCGCTCCTGGGTaGCTAGGTCCTGGCGTAGGCGCTCAGCAGCAGACGCTGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRPRCPASPDYAAPG*LGPGVGAQQQTLWL Trigger: TAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCTAGCCACCCAGGAGCGGCATAGTCTGGAGATGCAGGGCACCTTGGCCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148975.3 |
||
| CDS CCA 90 bp | TGGAGACAGAAGGTCCTGTGTGCTGGGGATGGTTCTATCCAGCTGTaGAGGTGGCGGCGGCAACGCAGCCCCTGTCTGCTGGATGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WRQKVLCAGDGSIQL*RWRRQRSPCLLDEL Trigger: CAGTTCATCCAGCAGACAGGGGCTGCGTTGCCGCCGCCACCTCCACAGCTGGATAGAACCATCCCCAGCACACAGGACCTTCTGTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS TCA 90 bp | AGCTTGGGCCAGCGCAATGACCACTTCTTGGCAGGTGGTCTGTTCTaGGACCCCACAGACCACCCTCTGGATGCCGTCCACCCAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGQRNDHFLAGGLF*DPTDHPLDAVHPDL Trigger: AAGGTCTGGGTGGACGGCATCCAGAGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046890.12 ENSMUST00000127613.2 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000148975.3 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS GCA 90 bp | CTTGGCAGGTGGTCTGTTCTGAGACCCCACAGACCACCCTCTGGATaGCGTCCACCCAGACCTTCAGCTCCATGGCCACAAGCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGRWSVLRPHRPPSG*RPPRPSAPWPQAPR Trigger: TCTTGGAGCTTGTGGCCATGGAGCTGAAGGTCTGGGTGGACGGCATCCAGAGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046890.12 ENSMUST00000127613.2 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000148975.3 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 90 bp | GGCAAACTGTCCACAAGTGGCCTGGGCTCCCACTGGACACTCCTGTaGCAGCAGCTGTCGTTCCTTCTCCCTAAGACGCTGCACAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GKLSTSGLGSHWTLL*QQLSFLLPKTLHKD Trigger: GTCCTTGTGCAGCGTCTTAGGGAGAAGGAACGACAGCTGCTGCCACAGGAGTGTCCAGTGGGAGCCCAGGCCACTTGTGGACAGTTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 90 bp | AGGTCCTGGCGTAGGCGCTCAGCAGCAGACGCTGTGGCTATAGCTTaGGCCAGCGCAATGACCACTTCTTGGCAGGTGGTCTGTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSWRRRSAADAVAIA*ASAMTTSWQVVCSE Trigger: CTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGCCACAGCGTCTGCTGCTGAGCGCCTACGCCAGGACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148975.3 |
||
| CDS GCA 90 bp | GGACTCCCTGGAGTTCTCCTCTATTTGGAGACAGAAGGTCCTGTGTaGTGGGGATGGTTCTATCCAGCTGTGGAGGTGGCGGCGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: GLPGVLLYLETEGPV*WGWFYPAVEVAAAT Trigger: CGTTGCCGCCGCCACCTCCACAGCTGGATAGAACCATCCCCAGCACACAGGACCTTCTGTCTCCAAATAGAGGAGAACTCCAGGGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS CCA 90 bp | CGACCTGTCTGGCCTATAGCTTGGGCCAGCGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAGACCCCACAGACCACCCTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPVWPIAWASAMTTS*QVVCSETPQTTLWM Trigger: CATCCAGAGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGGCCAGACAGGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 90 bp | GCAGACGCTGTGGCTATAGCTTGGGCCAGCGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAGACCCCACAGACCACCCTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ADAVAIAWASAMTTS*QVVCSETPQTTLWM Trigger: CATCCAGAGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGCCACAGCGTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148975.3 |
||
| CDS CCA 90 bp | CTGAACATCATTGGCAAACTGTCCACAAGTGGCCTGGGCTCCCACTaGACACTCCTGTGGCAGCAGCTGTCGTTCCTTCTCCCTAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LNIIGKLSTSGLGSH*TLLWQQLSFLLPKT Trigger: CGTCTTAGGGAGAAGGAACGACAGCTGCTGCCACAGGAGTGTCCAGTGGGAGCCCAGGCCACTTGTGGACAGTTTGCCAATGATGTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCTCTGGGGGTGGACAGTaGTCTGAGGAGGGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LALGKESCDHTLLLSRRLSGGGQ*SEEGLP Trigger: TGGAAGGCCCTCCTCAGACAACTGTCCACCCCCAGA...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTAGCTGCACTCAGTGCTaGCAGGCGTGCCTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RNTLSILFFSPCLWGLLSSCTQC*QACLSL Trigger: GAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCT...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | AATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTAGCTGCACTCAGTGCTaGCAGGCGTGCCTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NTLSILFFSPCLWGLLSSSCTQC*QACLSL Trigger: GAGGGACAGGCACGCCTGCAAGCACTGAGTGCAGCT...AGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCTTTAGGGAAAGAGTCCTGTGATCATACTCTCCTGCTATCCAGGCGGCTCCTGCTGGATGAACTGTaGCAGGTTGCACTGACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LALGKESCDHTLLLSRRLLLDEL*QVALTE Trigger: CTCCGTCAGTGCAACCTGCAACAGTTCATCCAGCAG...GAGCCGCCTGGATAGCAGGAGAGTATGATCACAGGACTCTTTCCCTAAAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | TCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTTCTGAACTGTACCCTGGCTTGTTCTCGTaGCAGCTCTTGCTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SILFFSPCLWGLLSSELYPGLFS*QLLLPE Trigger: TTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGG...GTACAGTTCAGAACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | AGGAATACACTGTCCATACTTTTCTTCTCTCCATGCCTTTGGGGCCTGCTAAGTCTGCTGGATGAACTGTaGCAGGTTGCACTGACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RNTLSILFFSPCLWGLLSLLDEL*QVALTE Trigger: CTCCGTCAGTGCAACCTGCAACAGTTCATCCAGCAG...ACTTAGCAGGCCCCAAAGGCATGGAGAGAAGAAAAGTATGGACAGTGTATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTGGGCTGGGGACCAGCTaGGGACATCTAAGGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSGLGTS*GHLRLK Trigger: CTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCC...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGTCTGGGGGTGGACAGTaGTCTGAGGAGGGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSELYPFITSSEDLGDLSGGGQ*SEEGLP Trigger: TGGAAGGCCCTCCTCAGACAACTGTCCACCCCCAGA...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTTTCTCGTTGCAGCTCTaGCTCCCAGAAGGCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSFSLQL*LPEGLM Trigger: CATGAGGCCTTCTGGGAGCAAGAGCTGCAACGAGAA...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | AGGTACATAGCAGGCACATACACAGGAGGAATACACTGTCCATACTTTTCTTCTCCTGGCTTGTTCTCGTaGCAGCTCTTGCTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RYIAGTYTGGIHCPYFSSPGLFS*QLLLPE Trigger: TTCTGGGAGCAAGAGCTGCAACGAGAACAAGCCAGG...AGAAGAAAAGTATGGACAGTGTATTCCTCCTGTGTATGTGCCTGCTATGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGTTCTGAACTGTACCCATTTATTACTTCTTCAGAGGACTTGGGAGATTTGGGGCTGGGGACCAGCTaGGGACATCTAAGGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSELYPFITSSEDLGDLGLGTS*GHLRLK Trigger: CTTCAACCTTAGATGTCCCAAGCTGGTCCCCAGCCC...CAAATCTCCCAAGTCCTCTGAAGAAGTAATAAATGGGTACAGTTCAGAACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS CCA 72 bp | AAGGTCCTGTGTGCTGGGGATGGTTCTATCCAGCTGTaGAGGTGGCGGCGGCAACGCAGCCCCTGTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KVLCAGDGSIQL*RWRRQRSPCLL Trigger: CAGCAGACAGGGGCTGCGTTGCCGCCGCCACCTCCACAGCTGGATAGAACCATCCCCAGCACACAGGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS CCA 72 bp | TCCACAAGTGGCCTGGGCTCCCACTGGACACTCCTGTaGCAGCAGCTGTCGTTCCTTCTCCCTAAGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: STSGLGSHWTLL*QQLSFLLPKTL Trigger: CAGCGTCTTAGGGAGAAGGAACGACAGCTGCTGCCACAGGAGTGTCCAGTGGGAGCCCAGGCCACTTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 72 bp | CGTAGGCGCTCAGCAGCAGACGCTGTGGCTATAGCTTaGGCCAGCGCAATGACCACTTCTTGGCAGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRRSAADAVAIA*ASAMTTSWQVV Trigger: GACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGCCACAGCGTCTGCTGCTGAGCGCCTACG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148975.3 |
||
| CDS TCA 72 bp | CAGCGCAATGACCACTTCTTGGCAGGTGGTCTGTTCTaGGACCCCACAGACCACCCTCTGGATGCCGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QRNDHFLAGGLF*DPTDHPLDAVH Trigger: GTGGACGGCATCCAGAGGGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046890.12 ENSMUST00000127613.2 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000148975.3 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 72 bp | GGGGGAACCTCGGGACTCAGGCTGGACACTAGGATGTaGCTCTGGGGGACTCCCTGGAGTTCTCCTCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: GGTSGLRLDTRM*LWGTPWSSPLF Trigger: AAATAGAGGAGAACTCCAGGGAGTCCCCCAGAGCCACATCCTAGTGTCCAGCCTGAGTCCCGAGGTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS CCA 72 bp | TGGCCTATAGCTTGGGCCAGCGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAGACCCCACAGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: WPIAWASAMTTS*QVVCSETPQTT Trigger: GGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 72 bp | CTCTATTTGGAGACAGAAGGTCCTGTGTGCTGGGGATaGTTCTATCCAGCTGTGGAGGTGGCGGCGGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: LYLETEGPVCWG*FYPAVEVAAAT Trigger: CGTTGCCGCCGCCACCTCCACAGCTGGATAGAACCATCCCCAGCACACAGGACCTTCTGTCTCCAAATAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS CCA 72 bp | GACGCTATAGCTTGGGCCAGCGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAGACCCCACAGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: DAIAWASAMTTS*QVVCSETPQTT Trigger: GGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127613.2 |
||
| CDS CCA 72 bp | GTGGCTATAGCTTGGGCCAGCGCAATGACCACTTCTTaGCAGGTGGTCTGTTCTGAGACCCCACAGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: VAIAWASAMTTS*QVVCSETPQTT Trigger: GGTGGTCTGTGGGGTCTCAGAACAGACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148975.3 |
||
| CDS CCA 72 bp | GTGGCTCTGGGGGACTCCCTGGAGTTCTCCTCTATTTaGAGACAGAAGGTCCTGTGGGGAAAGCAGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VALGDSLEFSSI*RQKVLWGKQVS Trigger: GCTGACCTGCTTTCCCCACAGGACCTTCTGTCTCCAAATAGAGGAGAACTCCAGGGAGTCCCCCAGAGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209500.2 |
||
| CDS CCA 72 bp | GTTCTCCTCTATTTGGAGACAGAAGGTCCTGTGTGCTaGGGATGGTTCTATCCAGCTGTGGAGGTGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLLYLETEGPVC*GWFYPAVEVAA Trigger: CGCCGCCACCTCCACAGCTGGATAGAACCATCCCCAGCACACAGGACCTTCTGTCTCCAAATAGAGGAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS CCA 72 bp | GTGGCTCTGGGGGACTCCCTGGAGTTCTCCTCTATTTaGAGACAGAAGGTCCTGTGTGCTGGGGATGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VALGDSLEFSSI*RQKVLCAGDGS Trigger: AGAACCATCCCCAGCACACAGGACCTTCTGTCTCCAAATAGAGGAGAACTCCAGGGAGTCCCCCAGAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS CCA 72 bp | TGCACAAGGACAAATCGACCTGTCTGGCCTATAGCTTaGGCCAGCGCAATGACCACTTCTTGGCAGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CTRTNRPVWPIA*ASAMTTSWQVV Trigger: GACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGGCCAGACAGGTCGATTTGTCCTTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CCA 72 bp | AGGCTGGACACTAGGATGTGGCTCTGGGGGACTCCCTaGAGTTCTCCTCTATTTGGAGACAGAAGGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLDTRMWLWGTP*SSPLFGDRRSC Trigger: ACAGGACCTTCTGTCTCCAAATAGAGGAGAACTCCAGGGAGTCCCCCAGAGCCACATCCTAGTGTCCAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046890.12 ENSMUST00000209500.2 |
||
| CDS CAA 72 bp | CTGCACAAGGACAAATCGACCTGTCTGGCCTATAGCTaGGGCCAGCGCAATGACCACTTCTTGGCAGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHKDKSTCLAYS*GQRNDHFLAGG Trigger: ACCACCTGCCAAGAAGTGGTCATTGCGCTGGCCCAAGCTATAGGCCAGACAGGTCGATTTGTCCTTGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046890.12 ENSMUST00000133763.8 ENSMUST00000141804.2 ENSMUST00000153081.2 ENSMUST00000209500.2 ENSMUST00000210993.2 |
||
| CDS CAA 90 bp | ACACTAGGATGTGGCTCTGGGGGACTCCCTGGAGTTCTCCTCTATTaGGAGACAGAAGGTCCTGTGTGCTGGGGATGGTTCTATCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLGCGSGGLPGVLLY*ETEGPVCWGWFYPA Trigger: AGCTGGATAGAACCATCCCCAGCACACAGGACCTTCTGTCTCCAAATAGAGGAGAACTCCAGGGAGTCCCCCAGAGCCACATCCTAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046890.12 |
||
| CDS CCA 72 bp | CTGGAGTTCTCCTCTATTTGGAGACAGAAGGTCCTGTaGGGAAAGCAGGTCAGCCGAGATAGATCTGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LEFSSIWRQKVL*GKQVSRDRSGG Trigger: ACCCCCAGATCTATCTCGGCTGACCTGCTTTCCCCACAGGACCTTCTGTCTCCAAATAGAGGAGAACTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209500.2 |
||