Pregenerated sensors for RASSF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029370Ensembl transcript IDs: ENSMUST00000031317.10, ENSMUST00000201121.4, ENSMUST00000201370.2, ENSMUST00000202704.4, ENSMUST00000202784.4, ENSMUST00000202807.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTCAGTTACTGAAATGAAGTCCCATCTTGCCTTAGTCCAACTCTaGACCGCAGCCAACCTCTGCATTTCAAAGAGGAAGCAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PSVTEMKSHLALVQL*TAANLCISKRKQAA Trigger: AGCAGCCTGCTTCCTCTTTGAAATGCAGAGGTTGGCTGCGGTTCAGAGTTGGACTAAGGCAAGATGGGACTTCATTTCAGTAACTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 ENSMUST00000202807.2 |
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| 3UTR GCA 90 bp | AGGAAGATCCGAGCATTGCTTTTGGATGGTCCTTGTAGTAACCTCTaGAGCAGTGGGACATCGGTCTTCTTTAGCTTTCTCTGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: RKIRALLLDGPCSNL*SSGTSVFFSFLCSP Trigger: AGGAGAGCAGAGAAAGCTAAAGAAGACCGATGTCCCACTGCTGCAGAGGTTACTACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR TCA 90 bp | TACTTCTTCAGTTCTCATGATACTATTGGCTCTGACCTTAGTCTCTaGTCCGAAAGTTGGGGTGAAGATGGATGTCTCATGGTCATAGAC | + |
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Preference number: 1 (lower is better) Translates to: YFFSSHDTIGSDLSL*SESWGEDGCLMVID Trigger: GTCTATGACCATGAGACATCCATCTTCACCCCAACTTTCGGATCAGAGACTAAGGTCAGAGCCAATAGTATCATGAGAACTGAAGAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR GCA 90 bp | AAAGTGAAAATTAATGTACGGAGCCACATCTCTGCTGATTTCTTCTaGATCTTTATCCATGAGGAAGATCCGAGCATTGCTTTTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: KVKINVRSHISADFF*IFIHEEDPSIAFGW Trigger: CCATCCAAAAGCAATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGAAATCAGCAGAGATGTGGCTCCGTACATTAATTTTCACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR CAA 90 bp | GTGGGTACCAGATCCTCTAGGACGGGGGTTGCAGATAATTGCCAGTaGCCCTGTAGATGCTGGGAACTGAACTGGGGATTTCTGGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: VGTRSSRTGVADNCQ*PCRCWELNWGFLEA Trigger: CGCTTCCAGAAATCCCCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAACCCCCGTCCTAGAGGATCTGGTACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCATGTTTACACAGCTGTaGAACAGGGTCAGTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LCVCVPRACNAHIGGYQIMFTQL*NRVSSD Trigger: ATCTGAACTGACCCTGTTTCACAGCTGTGTAAACAT...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR GCA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGAAAAGAGGAAGCAGGCTaGTCGGCATTCGTTCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRKEEAG*SAFVRP Trigger: TGGACGAACGAATGCCGAGCAGCCTGCTTCCTCTTT...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 ENSMUST00000202807.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCGAATGTGTTTCTTGTTaGCATCAGGAACTGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: LCVCVPRACNAHIGGYQIECVSC*HQELEM Trigger: CATTTCCAGTTCCTGATGTCAACAAGAAACACATTC...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR TCA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGAGTAGATGCTGGGAACTaGACTGGGGATTTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRVDAGN*TGDFWK Trigger: CTTCCAGAAATCCCCAGTTCAGTTCCCAGCATCTAC...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR GCA 90 bp | GTTGCAGATAATTGCCAGTTGCCCTGTAGATGCTGGGAACTGAACTGGGGATTTACCGCAGCCAACCTCTaGATTTCAAAGAGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VADNCQLPCRCWELNWGFTAANL*ISKRKQ Trigger: CTGCTTCCTCTTTGAAATGCAGAGGTTGGCTGCGGT...AAATCCCCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR CAA 90 bp | ATTTCTTCTGCATCTTTATCCATGAGGAAGATCCGAGCATTGCTTTaGGATGGTCCTTGTAGTAACCTCTGCAGCAGTGGGACATCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ISSASLSMRKIRALL*DGPCSNLCSSGTSV Trigger: GACCGATGTCCCACTGCTGCAGAGGTTACTACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR CAA 90 bp | CTGCTGATTTCTTCTGCATCTTTATCCATGAGGAAGATCCGAGCATaGCTTTTGGATGGTCCTTGTAGTAACCTCTGCAGCAGTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LLISSASLSMRKIRA*LLDGPCSNLCSSGT Trigger: TGTCCCACTGCTGCAGAGGTTACTACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGAAATCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGAAAAGCTTCAGAGCCATaGATATTAGGATGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRKASEP*ILGCRA Trigger: TGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTT...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 ENSMUST00000202807.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGTCCTTGTAGTAACCTCTGCAGCAGTGGGACATCGGTCTTCTTTAGCTAAAGCTTCAGAGCCATaGATATTAGGATGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: WMVLVVTSAAVGHRSSLAKASEP*ILGCRA Trigger: TGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTT...AGCTAAAGAAGACCGATGTCCCACTGCTGCAGAGGTTACTACAAGGACCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR TCA 90 bp | CACATCTCTGCTGATTTCTTCTGCATCTTTATCCATGAGGAAGATCCGAGCATTATCCGAAAGTTGGGGTaGAGATGGATGTCTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: HISADFFCIFIHEEDPSIIRKLG*RWMSHG Trigger: ACCATGAGACATCCATCTTCACCCCAACTTTCGGAT...AATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGAAATCAGCAGAGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTAAAGAGCGAAATCCCGAGGGCTATTCTCAATCTTAAATTTCTGGAGAAGAAGCTGCCTCACTCATaGTCCTGTAGAGCAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: NVKSEIPRAILNLKFLEKKLPHS*SCRAMG Trigger: CCCCATTGCTCTACAGGACCATGAGTGAGGCAGCTT...CTTCTCCAGAAATTTAAGATTGAGAATAGCCCTCGGGATTTCGCTCTTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCTTTTAAAAGAGGAAGCAGGCTaGTCGGCATTCGTTCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: WKCLLPVIYESSSISALLKEEAG*SAFVRP Trigger: TGGACGAACGAATGCCGAGCAGCCTGCTTCCTCTTT...TAAAAGAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGCTGATTTCTTCTGCATCTTTATCCATGAGGAAGATCCGAGCATTGCTTTTTTCTCACCAAAGCTaGCTCACTCATGGTCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SLLISSASLSMRKIRALLFSHQS*LTHGPV Trigger: TACAGGACCATGAGTGAGGCAGCTTTGGTGAGAAAA...AAGCAATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGAAATCAGCAGAGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR GCA 90 bp | GGAACTGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCAAAGCTTCAGAGCCATaGATATTAGGATGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GTGNVYFPSFMSHQVSRLKASEP*ILGCRA Trigger: TGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTT...GAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTACTCTGATACTTCAGAGTTTAAAATCATCAGCCCTTGTAGATCTATTCCTGTTGACATCAGGAACTaGAAATGTTTACTTCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: GYSDTSEFKIISPCRSIPVDIRN*KCLLPV Trigger: GACGGGAAGTAAACATTTCCAGTTCCTGATGTCAAC...AGGAATAGATCTACAAGGGCTGATGATTTTAAACTCTGAAGTATCAGAGTACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCTATTGCTTTCTTTAATGGGCTTACCTGCCCATACAGTATATGCAGATTTTCCTCATATCCAGAGATaGACAGATGTCAAACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KLLLSLMGLPAHTVYADFPHIQR*TDVKLE Trigger: CTCAAGTTTGACATCTGTGCATCTCTGGATATGAGG...AAAATCTGCATATACTGTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
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| 3UTR CCA 72 bp | TGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTaGGTACCAGATCCTCTAGGACGGGGGTTGCAGATA | + |
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Preference number: 3 (lower is better) Translates to: CLCAPCLQCPHR*VPDPLGRGLQI Trigger: TATCTGCAACCCCCGTCCTAGAGGATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR GCA 72 bp | GGTACCAGATCCTCTAGGACGGGGGTTGCAGATAATTaGCAGTTGCCCTGTAGATGCTGGGAACTGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: GTRSSRTGVADN*QLPCRCWELNW Trigger: CCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAACCCCCGTCCTAGAGGATCTGGTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR GCA 72 bp | CGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATaGAGAGCAGACCACACACGGATTCTGCAGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RSSKASEPCILG*RADHTRILQCS Trigger: GGAGCACTGCAGAATCCGTGTGTGGTCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 ENSMUST00000202807.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCTGCAGTGCTCCCTCTAACTCCGCTGAGCAGGGCTTCTAGACTGTGGTCTAGGAAGATCCGAGCATaGCTTTTGGATGGTCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: DSAVLPLTPLSRASRLWSRKIRA*LLDGPC Trigger: ACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCT...AGACCACAGTCTAGAAGCCCTGCTCAGCGGAGTTAGAGGGAGCACTGCAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR GCA 72 bp | CTGCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATaGATATTAGGATGCAGAGCAGACCACACACGGATT | + |
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Preference number: 3 (lower is better) Translates to: LLGIRSSKASEP*ILGCRADHTRI Trigger: AATCCGTGTGTGGTCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 ENSMUST00000202807.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCAGAATGTGTTTCTTGTaGACATCAGGAACTGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: LCVCVPRACNAHIGGYQIRMCFL*TSGTGN Trigger: ATTTCCAGTTCCTGATGTCAACAAGAAACACATTCT...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR GCA 72 bp | CGAGCATTGCTTTTGGATGGTCCTTGTAGTAACCTCTaGAGCAGTGGGACATCGGTCTTCTTTAGCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RALLLDGPCSNL*SSGTSVFFSFL Trigger: GAGAAAGCTAAAGAAGACCGATGTCCCACTGCTGCAGAGGTTACTACAAGGACCATCCAAAAGCAATGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR CAA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGAATCCGAGCATTGCTTTaGGATGGTCCTTGTAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRIRALL*DGPCSN Trigger: GTTACTACAAGGACCATCCAAAAGCAATGCTCGGAT...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR CAA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGAAAGGCCCTTTCGGTATaGAATTTTGCCATAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRKALSV*NFAIIL Trigger: GAGAATTATGGCAAAATTCAATACCGAAAGGGCCTT...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR TCA 72 bp | AGTTCTCATGATACTATTGGCTCTGACCTTAGTCTCTaGTCCGAAAGTTGGGGTGAAGATGGATGTCTCATG | + |
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Preference number: 3 (lower is better) Translates to: SSHDTIGSDLSL*SESWGEDGCLM Trigger: CATGAGACATCCATCTTCACCCCAACTTTCGGATCAGAGACTAAGGTCAGAGCCAATAGTATCATGAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR GCA 72 bp | ATTAATGTACGGAGCCACATCTCTGCTGATTTCTTCTaGATCTTTATCCATGAGGAAGATCCGAGCATTGCT | + |
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Preference number: 3 (lower is better) Translates to: INVRSHISADFF*IFIHEEDPSIA Trigger: AGCAATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGAAATCAGCAGAGATGTGGCTCCGTACATTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| 3UTR-3UTR CAA 90 bp | GCTATTGCTTTCTTTAATGGGCTTACCTGCCCATACAGTATATGCAGATTTTTCGCACAGATGTCAAACTaGAGTTGTAACATAGCAACC | + |
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Preference number: 3 (lower is better) Translates to: AIAFFNGLTCPYSICRFFAQMSN*SCNIAT Trigger: GGTTGCTATGTTACAACTCAAGTTTGACATCTGTGC...GAAAAATCTGCATATACTGTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
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| 3UTR CCA 72 bp | TGGCTTGAGAATGTGTTTCTTGTTGACATCAGGAACTaGAAATGTTTACTTCCCGTCATTTATGAGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: WLENVFLVDIRN*KCLLPVIYESS Trigger: TGATGACTCATAAATGACGGGAAGTAAACATTTCCAGTTCCTGATGTCAACAAGAAACACATTCTCAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR GCA 72 bp | GTGAATCAAGCTATTGCTTTCTTTAATGGGCTTACCTaGCCATACAGTATATGCAGATTTTTCTGGTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: VNQAIAFFNGLT*PYSICRFFWFS Trigger: TGAAAACCAGAAAAATCTGCATATACTGTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAGCTTGATTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCAAGCTGCCTCACTCATaGTCCTGTAGAGCAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: LCVCVPRACNAHIGGYQIKLPHS*SCRAMG Trigger: CCCCATTGCTCTACAGGACCATGAGTGAGGCAGCTT...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCGCTGTATGGGTCGTTTaGCTCCCCAGAAAATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCVCVPRACNAHIGGYQIAVWVV*LPRKCP Trigger: TGGACATTTTCTGGGGAGTCAAACGACCCATACAGC...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCTCCTGTCCAGCTCGCTaGTACGGTAAAGGTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LCVCVPRACNAHIGGYQISCPAR*YGKGHQ Trigger: TTGATGACCTTTACCGTATCAGCGAGCTGGACAGGA...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTCTGTGTGCCCCGTGCTTGCAATGCCCACATAGGTGGGTACCAGATCGGAAGATCCGAGCATTaGTTTTGGATGGTCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LCVCVPRACNAHIGGYQIGRSEH*FWMVLV Trigger: TACAAGGACCATCCAAAAGCAATGCTCGGATCTTCC...GATCTGGTACCCACCTATGTGGGCATTGCAAGCACGGGGCACACAGACACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | CAGGCTGCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGGCTGTATGGGTCGTTTaGCTCCCCAGAAAATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QAARHSFVQSFRAMHIRMAVWVV*LPRKCP Trigger: TGGACATTTTCTGGGGAGTCAAACGACCCATACAGC...CATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR GCA 90 bp | GCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCGAGTCATCCTCCCTTTaGTGGAAAAGGTTTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: ARHSFVQSFRAMHIRMQSESSSL*WKRFPV Trigger: CACCGGAAACCTTTTCCAGCAAAGGGAGGATGACTC...GCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR CAA 72 bp | AGATCCTCTAGGACGGGGGTTGCAGATAATTGCCAGTaGCCCTGTAGATGCTGGGAACTGAACTGGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: RSSRTGVADNCQ*PCRCWELNWGF Trigger: AAATCCCCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAACCCCCGTCCTAGAGGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | TGGATGGTCCTTGTAGTAACCTCTGCAGCAGTGGGACATCGGTCTTCTTTAGCTTCCTGTCCAGCTCGCTaGTACGGTAAAGGTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: WMVLVVTSAAVGHRSSLASCPAR*YGKGHQ Trigger: TTGATGACCTTTACCGTATCAGCGAGCTGGACAGGA...AGCTAAAGAAGACCGATGTCCCACTGCTGCAGAGGTTACTACAAGGACCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTGCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGATCCGAAAGTTGGGGTaGAGATGGATGTCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: QAARHSFVQSFRAMHIRMIRKLG*RWMSHG Trigger: ACCATGAGACATCCATCTTCACCCCAACTTTCGGAT...CATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGCAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR GCA 90 bp | CAGGCTGCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGTTTTCTCACCAAAGCTaGCTCACTCATGGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QAARHSFVQSFRAMHIRMFSHQS*LTHGPV Trigger: TACAGGACCATGAGTGAGGCAGCTTTGGTGAGAAAA...CATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGCAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | GTTGCAGATAATTGCCAGTTGCCCTGTAGATGCTGGGAACTGAACTGGGGATTTCTGCATCTTTATCCATaGGGAAGATCCGAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VADNCQLPCRCWELNWGFLHLYP*GRSEHC Trigger: GCAATGCTCGGATCTTCCTCATGGATAAAGATGCAG...AAATCCCCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR GCA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGATTTTCTCACCAAAGCTaGCTCACTCATGGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRFSHQS*LTHGPV Trigger: TACAGGACCATGAGTGAGGCAGCTTTGGTGAGAAAA...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR CCA 90 bp | GGAACTGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCAAGCTGCCTCACTCATaGTCCTGTAGAGCAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGNVYFPSFMSHQVSRLKLPHS*SCRAMG Trigger: CCCCATTGCTCTACAGGACCATGAGTGAGGCAGCTT...GAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCAGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR GCA 90 bp | CAGGCTGCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGTCTGCTGATTTCTTCTaGATCTTTATCCATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAARHSFVQSFRAMHIRMSADFF*IFIHEE Trigger: TTCCTCATGGATAAAGATGCAGAAGAAATCAGCAGA...CATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGCAGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR CAA 72 bp | AGCTGTGAAACAGGGTCAGTTCAGATCGCTGATGGCTaGAGAATGTGTTTCTTGTTGACATCAGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCETGSVQIADG*RMCFLLTSGTG Trigger: TCCAGTTCCTGATGTCAACAAGAAACACATTCTCAAGCCATCAGCGATCTGAACTGACCCTGTTTCACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| 3UTR CAA 72 bp | TCTTCTGCATCTTTATCCATGAGGAAGATCCGAGCATaGCTTTTGGATGGTCCTTGTAGTAACCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSASLSMRKIRA*LLDGPCSNLCS Trigger: GCTGCAGAGGTTACTACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCTCATGGATAAAGATGCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
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| CDS-3UTR TCA 90 bp | GGAACTGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCTGGATGTGCTCTCATTaGCAACGATCCAAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTGNVYFPSFMSHQVSRLWMCSH*QRSKKG Trigger: TCCCTTCTTGGATCGTTGTCAATGAGAGCACATCCA...GAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | CTGTTCTCTGTGAATCAAGCTATTGCTTTCTTTAATGGGCTTACCTGCCCATACTGGATGTGCTCTCATTaGCAACGATCCAAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSVNQAIAFFNGLTCPYWMCSH*QRSKKG Trigger: TCCCTTCTTGGATCGTTGTCAATGAGAGCACATCCA...GTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAGCTTGATTCACAGAGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGACCACACACGGATTCTTCTCCAGTAAATAATTaGGTTGTTCCCTGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: QSFRAMHIRMQSRPHTDSSPVNN*VVPCLW Trigger: CCATAAGCAGGGAACAACTCAATTATTTACTGGAGA...AGAATCCGTGTGTGGTCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCCTGCATCTTTATCCATaGGGAAGATCCGAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGNVYFPSFMSHQVSRLLHLYP*GRSEHC Trigger: GCAATGCTCGGATCTTCCTCATGGATAAAGATGCAG...GAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR GCA 90 bp | AATGTAAAGAGCGAAATCCCGAGGGCTATTCTCAATCTTAAATTTCTGGAGAAGAGTGCTTCCGGGGAATaGCTGGCTTCAGATGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVKSEIPRAILNLKFLEKSASGE*LASDAR Trigger: TCTAGCATCTGAAGCCAGGCATTCCCCGGAAGCACT...CTTCTCCAGAAATTTAAGATTGAGAATAGCCCTCGGGATTTCGCTCTTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202807.2 |
||
| 3UTR CAA 72 bp | GTTCAGATCGCTGATGGCTTGAGAATGTGTTTCTTGTaGACATCAGGAACTGGAAATGTTTACTTCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQIADGLRMCFL*TSGTGNVYFPS Trigger: TGACGGGAAGTAAACATTTCCAGTTCCTGATGTCAACAAGAAACACATTCTCAAGCCATCAGCGATCTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | GGGTACTCTGATACTTCAGAGTTTAAAATCATCAGCCCTTGTAGATCTATTCCTATCCGAAAGTTGGGGTaGAGATGGATGTCTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYSDTSEFKIISPCRSIPIRKLG*RWMSHG Trigger: ACCATGAGACATCCATCTTCACCCCAACTTTCGGAT...AGGAATAGATCTACAAGGGCTGATGATTTTAAACTCTGAAGTATCAGAGTACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR TCA 90 bp | CTATTGCTTTCTTTAATGGGCTTACCTGCCCATACAGTATATGCAGATTTTTCTGCCCTCTTCCATTCTTaGTCCTGCTTATGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLMGLPAHTVYADFSALFHS*SCLWMC Trigger: GCACATCCATAAGCAGGATCAAGAATGGAAGAGGGC...AGAAAAATCTGCATATACTGTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCTTTTATGGATGTGCTCTCATTaGCAACGATCCAAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKCLLPVIYESSSISALLWMCSH*QRSKKG Trigger: TCCCTTCTTGGATCGTTGTCAATGAGAGCACATCCA...TAAAAGAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCGGGTACTCTGATACTTCAGAGTTTAAAATCATCAGCCCTTGTAGATCTACGTATGGTGTCAGAGTaGTGTGGTAAGATAAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSGTLILQSLKSSALVDLRMVSE*CGKINS Trigger: ACTATTTATCTTACCACAGCACTCTGACACCATACG...TAGATCTACAAGGGCTGATGATTTTAAACTCTGAAGTATCAGAGTACCCGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031317.10 |
||
| CDS-3UTR GCA 90 bp | CTATTGCTTTCTTTAATGGGCTTACCTGCCCATACAGTATATGCAGATTTTTCTAAGGTGGTTCTTCTATaGTTTCCCTGGAAACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLMGLPAHTVYADFSKVVLL*FPWKPR Trigger: CCTTGGTTTCCAGGGAAAGCATAGAAGAACCACCTT...AGAAAAATCTGCATATACTGTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCTTTTATCTCCAGTAAATAATTaGGTTGTTCCCTGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: WKCLLPVIYESSSISALLSPVNN*VVPCLW Trigger: CCATAAGCAGGGAACAACTCAATTATTTACTGGAGA...TAAAAGAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS-3UTR GCA 90 bp | TGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCTTTTATCTGCTGATTTCTTCTaGATCTTTATCCATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKCLLPVIYESSSISALLSADFF*IFIHEE Trigger: TTCCTCATGGATAAAGATGCAGAAGAAATCAGCAGA...TAAAAGAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS TCA 90 bp | AATGCCTGGCTTCAGATGCTAGAACATGGGTCCTGTCCAGCTCGCTaGTACGGTAAAGGTCATCAAATTCTCCCCAGCGAGTCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NAWLQMLEHGSCPAR*YGKGHQILPSESSS Trigger: GGAGGATGACTCGCTGGGGAGAATTTGATGACCTTTACCGTATCAGCGAGCTGGACAGGACCCATGTTCTAGCATCTGAAGCCAGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 ENSMUST00000202784.4 |
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| CDS GCA 90 bp | AGAGCAATGGGGATTCCGGCTCTTCGTCTGCGTATGGTGTCAGAGTaGTGTGGTAAGATAAATAGTCTTCCGGGGAATGCCTGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAMGIPALRLRMVSE*CGKINSLPGNAWLQ Trigger: CTGAAGCCAGGCATTCCCCGGAAGACTATTTATCTTACCACAGCACTCTGACACCATACGCAGACGAAGAGCCGGAATCCCCATTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 |
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| CDS-3UTR CAA 90 bp | CAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGACCACACACGGATTCTAGCTGTATGGGTCGTTaGACTCCCCAGAAAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSFRAMHIRMQSRPHTDSSCMGR*TPQKMS Trigger: GGACATTTTCTGGGGAGTCAAACGACCCATACAGCT...AGAATCCGTGTGTGGTCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR CAA 90 bp | GCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCGTTCTCATGATACTATaGGCTCTGACCTTAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARHSFVQSFRAMHIRMQSVLMIL*ALTLVS Trigger: AGAGACTAAGGTCAGAGCCAATAGTATCATGAGAAC...GCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR CAA 90 bp | GTTGCAGATAATTGCCAGTTGCCCTGTAGATGCTGGGAACTGAACTGGGGATTTAGGAAGATCCGAGCATaGCTTTTGGATGGTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VADNCQLPCRCWELNWGFRKIRA*LLDGPC Trigger: ACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCT...AAATCCCCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS GCA 90 bp | TACGGTAAAGGTCATCAAATTCTCCCCAGCGAGTCATCCTCCCTTTaGTGGAAAAGGTTTCCGGTGTGTTCAACAGATCAAAGGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YGKGHQILPSESSSL*WKRFPVCSTDQRKR Trigger: TCTCTTCCTTTGATCTGTTGAACACACCGGAAACCTTTTCCAGCAAAGGGAGGATGACTCGCTGGGGAGAATTTGATGACCTTTACCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 ENSMUST00000202784.4 |
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| CDS-3UTR CAA 90 bp | GTTGCAGATAATTGCCAGTTGCCCTGTAGATGCTGGGAACTGAACTGGGGATTTATCCGAGCATTGCTTTaGGATGGTCCTTGTAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VADNCQLPCRCWELNWGFIRALL*DGPCSN Trigger: GTTACTACAAGGACCATCCAAAAGCAATGCTCGGAT...AAATCCCCAGTTCAGTTCCCAGCATCTACAGGGCAACTGGCAATTATCTGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR CAA 90 bp | GCTCGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAAGGCCCTTTCGGTATaGAATTTTGCCATAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARHSFVQSFRAMHIRMQSKALSV*NFAIIL Trigger: GAGAATTATGGCAAAATTCAATACCGAAAGGGCCTT...GCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS CCA 90 bp | GGTAAAGGTCATCAAATTCTCCCCAGCGAGTCATCCTCCCTTTGCTaGAAAAGGTTTCCGGTGTGTTCAACAGATCAAAGGAAGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: GKGHQILPSESSSLC*KRFPVCSTDQRKRF Trigger: AAATCTCTTCCTTTGATCTGTTGAACACACCGGAAACCTTTTCCAGCAAAGGGAGGATGACTCGCTGGGGAGAATTTGATGACCTTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 ENSMUST00000202784.4 |
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| CDS-3UTR CAA 90 bp | CGGCATTCGTTCGTCCAAAGCTTCAGAGCCATGCATATTAGGATGCAGAGCAGAGATTTGCTTCTCATCTaGTATTTTCAGCTGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHSFVQSFRAMHIRMQSRDLLLI*YFQLYG Trigger: CCCATACAGCTGAAAATACAAGATGAGAAGCAAATC...TCTGCTCTGCATCCTAATATGCATGGCTCTGAAGCTTTGGACGAACGAATGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
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| CDS-3UTR CAA 90 bp | TGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCTTTTAAGCTGTATGGGTCGTTaGACTCCCCAGAAAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKCLLPVIYESSSISALLSCMGR*TPQKMS Trigger: GGACATTTTCTGGGGAGTCAAACGACCCATACAGCT...TAAAAGAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS-3UTR CAA 90 bp | GGGTACTCTGATACTTCAGAGTTTAAAATCATCAGCCCTTGTAGATCTATTCCTAGGAAGATCCGAGCATaGCTTTTGGATGGTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GYSDTSEFKIISPCRSIPRKIRA*LLDGPC Trigger: ACAAGGACCATCCAAAAGCAATGCTCGGATCTTCCT...AGGAATAGATCTACAAGGGCTGATGATTTTAAACTCTGAAGTATCAGAGTACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS-3UTR CAA 90 bp | GCTATTGCTTTCTTTAATGGGCTTACCTGCCCATACAGTATATGCAGATTTTTCAGCCCTCTTCCATTCTaGATCCTGCTTATGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: AIAFFNGLTCPYSICRFFSPLPF*ILLMDV Trigger: CACATCCATAAGCAGGATCAAGAATGGAAGAGGGCT...GAAAAATCTGCATATACTGTATGGGCAGGTAAGCCCATTAAAGAAAGCAATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
||
| CDS-3UTR CAA 90 bp | GGAACTGGAAATGTTTACTTCCCGTCATTTATGAGTCATCAAGTATCTCGGCTCGATTTGCTTCTCATCTaGTATTTTCAGCTGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGNVYFPSFMSHQVSRLDLLLI*YFQLYG Trigger: CCCATACAGCTGAAAATACAAGATGAGAAGCAAATC...GAGCCGAGATACTTGATGACTCATAAATGACGGGAAGTAAACATTTCCAGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS-3UTR CAA 90 bp | GGGTACTCTGATACTTCAGAGTTTAAAATCATCAGCCCTTGTAGATCTATTCCTATCCGAGCATTGCTTTaGGATGGTCCTTGTAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GYSDTSEFKIISPCRSIPIRALL*DGPCSN Trigger: GTTACTACAAGGACCATCCAAAAGCAATGCTCGGAT...AGGAATAGATCTACAAGGGCTGATGATTTTAAACTCTGAAGTATCAGAGTACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202784.4 |
||
| CDS CCA 72 bp | ATGGGGATTCCGGCTCTTCGTCTTCCGGGGAATGCCTaGCTTCAGATGCTAGAACATGGGTCCTGTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MGIPALRLPGNA*LQMLEHGSCPA Trigger: AGCTGGACAGGACCCATGTTCTAGCATCTGAAGCCAGGCATTCCCCGGAAGACGAAGAGCCGGAATCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202784.4 |
||
| CDS CCA 72 bp | CACCAAAGCTGCCTCACTCATGGTCCTGTAGAGCAATaGGGATTCCGGCTCTTCGTCTTCCGGGGAATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HQSCLTHGPVEQ*GFRLFVFRGMP Trigger: AGGCATTCCCCGGAAGACGAAGAGCCGGAATCCCCATTGCTCTACAGGACCATGAGTGAGGCAGCTTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202784.4 |
||
| CDS CCA 72 bp | CACCAAAGCTGCCTCACTCATGGTCCTGTAGAGCAATaGGGATTCCGGCTCTTCGTCTGCGTATGGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQSCLTHGPVEQ*GFRLFVCVWCQ Trigger: CTGACACCATACGCAGACGAAGAGCCGGAATCCCCATTGCTCTACAGGACCATGAGTGAGGCAGCTTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 |
||
| CDS TCA 72 bp | CTTCAGATGCTAGAACATGGGTCCTGTCCAGCTCGCTaGTACGGTAAAGGTCATCAAATTCTCCCCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LQMLEHGSCPAR*YGKGHQILPSE Trigger: CTCGCTGGGGAGAATTTGATGACCTTTACCGTATCAGCGAGCTGGACAGGACCCATGTTCTAGCATCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 ENSMUST00000202784.4 |
||
| CDS CCA 72 bp | TGCTGTGGTAAGATAAATAGTCTTCCGGGGAATGCCTaGCTTCAGATGCTAGAACATGGGTCCTGTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CCGKINSLPGNA*LQMLEHGSCPA Trigger: AGCTGGACAGGACCCATGTTCTAGCATCTGAAGCCAGGCATTCCCCGGAAGACTATTTATCTTACCACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 |
||
| CDS CAA 72 bp | TGCTTTCCCTGGAAACCAAGGAGCCCTCTTCCATTCTaGATCCTGCTTATGGATGTGCTCTCATTGACAACG | + |
|
Preference number: 6 (lower is better) Translates to: CFPWKPRSPLPF*ILLMDVLSLTT Trigger: CGTTGTCAATGAGAGCACATCCATAAGCAGGATCAAGAATGGAAGAGGGCTCCTTGGTTTCCAGGGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
||
| CDS CAA 90 bp | GTTCTTCTATGCTTTCCCTGGAAACCAAGGAGCCCTCTTCCATTCTaGATCCTGCTTATGGATGTGCTCTCATTGACAACGATCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VLLCFPWKPRSPLPF*ILLMDVLSLTTIQE Trigger: TTCTTGGATCGTTGTCAATGAGAGCACATCCATAAGCAGGATCAAGAATGGAAGAGGGCTCCTTGGTTTCCAGGGAAAGCATAGAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201121.4 |
||
| CDS TCA 72 bp | CTTCTATGCTTTCCCTGCTTATGGATGTGCTCTCATTaGCAACGATCCAAGAAGGGAACTGGTGATCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LLCFPCLWMCSH*QRSKKGTGDPL Trigger: CAATGGATCACCAGTTCCCTTCTTGGATCGTTGTCAATGAGAGCACATCCATAAGCAGGGAAAGCATAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201370.2 |
||
| CDS CCA 72 bp | CTCTTGTTTTTCCAGTTGTTCAAAGCACCTATAAGGTaGTTCTTCTATGCTTTCCCTGCTTATGGATGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLFFQLFKAPIR*FFYAFPAYGCA Trigger: AGCACATCCATAAGCAGGGAAAGCATAGAAGAACCACCTTATAGGTGCTTTGAACAACTGGAAAAACAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201370.2 |
||
| CDS CAA 72 bp | GTTCAACAGATCAAAGGAAGAGATTTGCTTCTCATCTaGTATTTTCAGCTGTATGGGTCGTTTGACTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQQIKGRDLLLI*YFQLYGSFDSP Trigger: TGGGGAGTCAAACGACCCATACAGCTGAAAATACAAGATGAGAAGCAAATCTCTTCCTTTGATCTGTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031317.10 ENSMUST00000202704.4 ENSMUST00000202784.4 |
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