Pregenerated sensors for RASSF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042129Ensembl transcript IDs: ENSMUST00000035842.7, ENSMUST00000203029.3, ENSMUST00000204576.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCACTTCCAGGGTTTCCTGTGTCAGTGGTTCCCCCAGCACTGAGTaGGTTCCTGGGTCAGGGACGGAAGCTGTCTCGTGGCTTACAGTA | + |
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Preference number: 1 (lower is better) Translates to: ATSRVSCVSGSPSTE*VPGSGTEAVSWLTV Trigger: TACTGTAAGCCACGAGACAGCTTCCGTCCCTGACCCAGGAACTCACTCAGTGCTGGGGGAACCACTGACACAGGAAACCCTGGAAGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | AGAGCTGGGTCTGGAAAATCTAGAGGCGACATCTACCCTGCCTTGTaGCTTCCCCCTGCACAGCTGTTCTCACACTCTGCTCTTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: RAGSGKSRGDIYPAL*LPPAQLFSHSALQG Trigger: GCCCTGAAGAGCAGAGTGTGAGAACAGCTGTGCAGGGGGAAGCCACAAGGCAGGGTAGATGTCGCCTCTAGATTTTCCAGACCCAGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | CTTGTGGCCATGCAGAGGCTCAGGGACAGGCACTGGGCAAGCAGATaGAACCCATTCTCCAGGGATAGGTGCTATACAGCTCTCTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: LVAMQRLRDRHWASR*NPFSRDRCYTALSS Trigger: GCTTGAGAGAGCTGTATAGCACCTATCCCTGGAGAATGGGTTTCATCTGCTTGCCCAGTGCCTGTCCCTGAGCCTCTGCATGGCCACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | ACTGGGCAGCAACCATTGGTCAGCGATCAGTTAGAGCTGGGTCCCTaGGACTCCATGCACACTTGCTACTGCAGGCATCACAAAAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: TGQQPLVSDQLELGP*DSMHTCYCRHHKRQ Trigger: TTGCCTTTTGTGATGCCTGCAGTAGCAAGTGTGCATGGAGTCCCAGGGACCCAGCTCTAACTGATCGCTGACCAATGGTTGCTGCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | CTGAGAGGCAATGAGAAGCAAGGGAAGACAGAGTTTCTGTTCGCATaGGTGATAAGGGCAGGGACTTGTGGCCATGCAGAGGCTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LRGNEKQGKTEFLFA*VIRAGTCGHAEAQG Trigger: TCCCTGAGCCTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGAAACTCTGTCTTCCCTTGCTTCTCATTGCCTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | GTACCAAGACTAGAGATGCAGGATGCTATGTCGTCCGTGGAGAGGTaGAATGAGCATGGGTACTGGGCAGCAACCATTGGTCAGCGATCA | + |
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Preference number: 1 (lower is better) Translates to: VPRLEMQDAMSSVER*NEHGYWAATIGQRS Trigger: TGATCGCTGACCAATGGTTGCTGCCCAGTACCCATGCTCATTCCACCTCTCCACGGACGACATAGCATCCTGCATCTCTAGTCTTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | TTTAGGATGACTTTATTGCTCAGGCCATCCACAGGCCACCACCAGTaGGTCCTTTCTTGTGTTCTAAAGCAGGGCAGCCTTGCCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: FRMTLLLRPSTGHHQ*VLSCVLKQGSLASG Trigger: GCCTGAGGCAAGGCTGCCCTGCTTTAGAACACAAGAAAGGACTCACTGGTGGTGGCCTGTGGATGGCCTGAGCAATAAAGTCATCCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | GAAGCAGGCCATATCTCACGACTGTTGGCAGCTCCTGCTCCAGAATaGTTCCTGAGAGGCAATGAGAAGCAAGGGAAGACAGAGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: EAGHISRLLAAPAPE*FLRGNEKQGKTEFL Trigger: CAGAAACTCTGTCTTCCCTTGCTTCTCATTGCCTCTCAGGAACCATTCTGGAGCAGGAGCTGCCAACAGTCGTGAGATATGGCCTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | ACGACTGTTGGCAGCTCCTGCTCCAGAATGGTTCCTGAGAGGCAATaGGAAGCAAGGGAAGACAGAGTTTCTGTTCGCATGGGTGATAAG | + |
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Preference number: 1 (lower is better) Translates to: TTVGSSCSRMVPERQ*EAREDRVSVRMGDK Trigger: CTTATCACCCATGCGAACAGAAACTCTGTCTTCCCTTGCTTCTCATTGCCTCTCAGGAACCATTCTGGAGCAGGAGCTGCCAACAGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | GCCATATCTCACGACTGTTGGCAGCTCCTGCTCCAGAATGGTTCCTaGGAGGCAATGAGAAGCAAGGGAAGACAGAGTTTCTGTTCGCAT | + |
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Preference number: 1 (lower is better) Translates to: AISHDCWQLLLQNGS*EAMRSKGRQSFCSH Trigger: ATGCGAACAGAAACTCTGTCTTCCCTTGCTTCTCATTGCCTCTCAGGAACCATTCTGGAGCAGGAGCTGCCAACAGTCGTGAGATATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR GCA 90 bp | GAAGCCACAGCCTCCATAGTCTCAAGTTCTGGGGTTGTTATGCCCTaGAAAGGTTGGTTCTCCAGTTGTCCTCTAAGAGCAGATGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: EATASIVSSSGVVMP*KGWFSSCPLRADVA Trigger: TGCCACATCTGCTCTTAGAGGACAACTGGAGAACCAACCTTTGCAGGGCATAACAACCCCAGAACTTGAGACTATGGAGGCTGTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | AAGAAAGTACAGTGCCAAAGAGGGGAGGAGGCAAGAGACCTCTCTTaGCAGCTGAGCATCTCTGTGAAACAGAGCTGGGTCTGGAAAATC | + |
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Preference number: 1 (lower is better) Translates to: KKVQCQRGEEARDLS*QLSISVKQSWVWKI Trigger: GATTTTCCAGACCCAGCTCTGTTTCACAGAGATGCTCAGCTGCCAAGAGAGGTCTCTTGCCTCCTCCCCTCTTTGGCACTGTACTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | GGCTCCTGGCACGTCAGCAGCTGGCTAATACCCAAGTGTAGTTCTTaGGGCCTAAATATAGTCCATGCGTCTGGTTGTTTTGAAACGTGC | + |
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Preference number: 1 (lower is better) Translates to: GSWHVSSWLIPKCSS*GLNIVHASGCFETC Trigger: GCACGTTTCAAAACAACCAGACGCATGGACTATATTTAGGCCCCAAGAACTACACTTGGGTATTAGCCAGCTGCTGACGTGCCAGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | AACATGCTCTATTTCTCTCAAAGTGGGTCCTTCAGCCCAGGAGCCTaGACAATGAGTCAGTTAGACAAGCCTGAGGCACTGTCTTATGCC | + |
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Preference number: 1 (lower is better) Translates to: NMLYFSQSGSFSPGA*TMSQLDKPEALSYA Trigger: GGCATAAGACAGTGCCTCAGGCTTGTCTAACTGACTCATTGTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | CTCTGCTCTTCAGGGCTCCATGAGTGGCTTCTACATGCACTGCCTTaGAGATGGAACTCTGTCTTCGAAGGCCTTCATCATACTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LCSSGLHEWLLHALP*RWNSVFEGLHHTSL Trigger: AAGAGAAGTATGATGAAGGCCTTCGAAGACAGAGTTCCATCTTCAAGGCAGTGCATGTAGAAGCCACTCATGGAGCCCTGAAGAGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR GCA 90 bp | TGTCTTATGCCCCTTGGGCTGGATGAAAAAGGAAACCCTGGGAATTaGCATGTTCTTAGATTAGCAGCAAACCATTGTCCCAACCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: CLMPLGLDEKGNPGN*HVLRLAANHCPNPA Trigger: AGCAGGGTTGGGACAATGGTTTGCTGCTAATCTAAGAACATGGCAATTCCCAGGGTTTCCTTTTTCATCCAGCCCAAGGGGCATAAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | GTCTTTCCCCTACTCCTGTTTCCGATCCGTTCTGGTCATTTGATCTaGACAAACAACCCTGTTTATCCTGAGCTCGGGACTTTTGCAATC | + |
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Preference number: 1 (lower is better) Translates to: VFPLLLFPIRSGHLI*TNNPVYPELGTFAI Trigger: GATTGCAAAAGTCCCGAGCTCAGGATAAACAGGGTTGTTTGTCCAGATCAAATGACCAGAACGGATCGGAAACAGGAGTAGGGGAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | GAATGGCCTGAGTATGGGATCAAACATGCTCTATTTCTCTCAAAGTaGGTCCTTCAGCCCAGGAGCCTGGACAATGAGTCAGTTAGACAA | + |
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Preference number: 1 (lower is better) Translates to: EWPEYGIKHALFLSK*VLQPRSLDNESVRQ Trigger: TTGTCTAACTGACTCATTGTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTTTGATCCCATACTCAGGCCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR GCA 90 bp | CAAGGCAATAAGCACAACAAGAAGAAGCACAAGAAAGGTTGGTCCTaGAGTTTCTGCTCAACACAACAGGCGTTTGTTAAGCACCGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QGNKHNKKKHKKGWS*SFCSTQQAFVKHRR Trigger: TCTTCGGTGCTTAACAAACGCCTGTTGTGTTGAGCAGAAACTGCAGGACCAACCTTTCTTGTGCTTCTTCTTGTTGTGCTTATTGCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | GATCCGTTCTGGTCATTTGATCTGGACAAACAACCCTGTTTATCCTaGGCTCGGGACTTTTGCAATCTTGTAATCACACTGATTTCGACC | + |
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Preference number: 1 (lower is better) Translates to: DPFWSFDLDKQPCLS*ARDFCNLVITLIST Trigger: GGTCGAAATCAGTGTGATTACAAGATTGCAAAAGTCCCGAGCTCAGGATAAACAGGGTTGTTTGTCCAGATCAAATGACCAGAACGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | ACAGATCAAGGCAATAAGCACAACAAGAAGAAGCACAAGAAAGGTTaGTCCTGCAGTTTCTGCTCAACACAACAGGCGTTTGTTAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: TDQGNKHNKKKHKKG*SCSFCSTQQAFVKH Trigger: GTGCTTAACAAACGCCTGTTGTGTTGAGCAGAAACTGCAGGACCAACCTTTCTTGTGCTTCTTCTTGTTGTGCTTATTGCCTTGATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR TCA 90 bp | CTGTGCTGGTCACTGACACACAGTATTCTTAACTCATACTGGATGTaGCAACAGCTTTGGAGAGAGATGTGGTATATACTGGTTAACTGC | + |
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Preference number: 1 (lower is better) Translates to: LCWSLTHSILNSYWM*QQLWREMWYILVNC Trigger: GCAGTTAACCAGTATATACCACATCTCTCTCCAAAGCTGTTGTCACATCCAGTATGAGTTAAGAATACTGTGTGTCAGTGACCAGCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR GCA 90 bp | AGTCTAACATTTGTGAACACTTCAGAGGAACACAGCAGAGAGCACTaGTCTGTGCAACTTGCTAGAGTTTTTCCAAACTCTAGTCATTCA | + |
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Preference number: 1 (lower is better) Translates to: SLTFVNTSEEHSREH*SVQLARVFPNSSHS Trigger: TGAATGACTAGAGTTTGGAAAAACTCTAGCAAGTTGCACAGAGCAGTGCTCTCTGCTGTGTTCCTCTGAAGTGTTCACAAATGTTAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CCA 90 bp | GACCTGTGCTGTTTACTATGTGAAGCTCTGAGGACAGATCTATTTTaGAAGACAGTCCTTTCTAACCGGGATCTTCACTTTATCTATAGA | + |
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Preference number: 1 (lower is better) Translates to: DLCCLLCEALRTDLF*KTVLSNRDLHFIYR Trigger: TCTATAGATAAAGTGAAGATCCCGGTTAGAAAGGACTGTCTTCCAAAATAGATCTGTCCTCAGAGCTTCACATAGTAAACAGCACAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCTGGTTCCCCCAGCACTaGGTGAGTTCCTGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSWFPQH*VSSWVR Trigger: CCTGACCCAGGAACTCACTCAGTGCTGGGGGAACCA...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCAGCCCAAGCGCACTGTaGAGCCACAGCCTCCATAGT | + |
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Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSSPSAL*SHSLHS Trigger: ACTATGGAGGCTGTGGCTTCACAGTGCGCTTGGGCT...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGCTCCTGGCACGTCAGGTTCCTGAGAGGCAATaGGAAGCAAGGGAAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: CWRAQNPTSGSVRLLARQVPERQ*EAREDR Trigger: TCTGTCTTCCCTTGCTTCTCATTGCCTCTCAGGAAC...CTGACGTGCCAGGAGCCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CAA 90 bp | AGGGAAGACAGAGTTTCTGTTCGCATGGGTGATAAGGGCAGGGACTaGTGGCCATGCAGAGGCTCAGGGACAGGCACTGGGCAAGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: REDRVSVRMGDKGRD*WPCRGSGTGTGQAD Trigger: ATCTGCTTGCCCAGTGCCTGTCCCTGAGCCTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGAAACTCTGTCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR GCA 90 bp | GTGAAACACCACCAAGTTGGTGGCCACTTCCAGGGTTTCCTGTGTCAGTGGTTCAGGGACTTGTGGCCATaGAGAGGCTCAGGGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: VKHHQVGGHFQGFLCQWFRDLWP*RGSGTG Trigger: GCCTGTCCCTGAGCCTCTGCATGGCCACAAGTCCCT...GAACCACTGACACAGGAAACCCTGGAAGTGGCCACCAACTTGGTGGTGTTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CAA 90 bp | CTTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTaGGACAGAGGTACGCCCTGCAGATGTTCTCTAGTGGCCAAAACC | + |
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Preference number: 2 (lower is better) Translates to: LPTVLGVSRREKPAC*DRGTPCRCSLVAKT Trigger: GGTTTTGGCCACTAGAGAACATCTGCAGGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
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| 3UTR-3UTR TCA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGGTGCTGTTTACTATGTaGAGCTCTGAGGACAGATCT | + |
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Preference number: 2 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRVLFTM*SSEDRS Trigger: AGATCTGTCCTCAGAGCTTCACATAGTAAACAGCAC...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR GCA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGAACTGTCTCCAAGTCTaGTCCTCCAGAAGAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRNCLQV*SSRRGI Trigger: AATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTT...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGCCACTGATGAGGGTCAGAGGGCCTGAGGACCTGGTAGTCAGAGTACTCCATGGCCTGTCACTCTaGAGCTGTGTTCACACAGTG | + |
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Preference number: 2 (lower is better) Translates to: CLPLMRVRGPEDLVVRVLHGLSL*SCVHTV Trigger: CACTGTGTGAACACAGCTGCAGAGTGACAGGCCATG...GAGTACTCTGACTACCAGGTCCTCAGGCCCTCTGACCCTCATCAGTGGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR CCA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGACAGCTCTCTCAAGCTaGAAATACACAGGAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRTALSS*KYTGTR Trigger: CCTTGTTCCTGTGTATTTCCAGCTTGAGAGAGCTGT...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR CAA 90 bp | AACAGAGCTGGGTCTGGAAAATCTAGAGGCGACATCTACCCTGCCTaGTGGCTTCCCCCTGCACAGCTGTTCTCACACTCTGCTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: NRAGSGKSRGDIYPA*WLPPAQLFSHSALQ Trigger: CTGAAGAGCAGAGTGTGAGAACAGCTGTGCAGGGGGAAGCCACAAGGCAGGGTAGATGTCGCCTCTAGATTTTCCAGACCCAGCTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | AGCACCGAAGAAAGTACAGTGCCAAAGAGGGGAGGAGGCAAGAGACCTCTCTTGTGGAGTGAAGGGGACTaGCCCTTCTGGATCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: STEESTVPKRGGGKRPLLWSEGD*PFWIHC Trigger: ACAGTGGATCCAGAAGGGTCAGTCCCCTTCACTCCA...CAAGAGAGGTCTCTTGCCTCCTCCCCTCTTTGGCACTGTACTTTCTTCGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCCTCCTACTTGAGATATaGGGATCTTCTGCCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSLLLEI*GSSALL Trigger: CAACAAGGCAGAAGATCCTCATATCTCAAGTAGGAG...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGCCACTGATGAGGGTCAGAGGGCCTGAGGACCTGGTAGTCAGAGTACTCTGGTCCTGCAGTTTCTaGTCAACACAACAGGCGTTT | + |
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Preference number: 2 (lower is better) Translates to: CLPLMRVRGPEDLVVRVLWSCSF*STQQAF Trigger: AAACGCCTGTTGTGTTGAGCAGAAACTGCAGGACCA...GAGTACTCTGACTACCAGGTCCTCAGGCCCTCTGACCCTCATCAGTGGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGCCACTGATGAGGGTCAGAGGGCCTGAGGACCTGGTAGTCAGAGTACTCACCATACAATGTGGCTaGTACCACAGTTCCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CLPLMRVRGPEDLVVRVLTIQCG*YHSSKA Trigger: AGCCTTGGAACTGTGGTACCAGCCACATTGTATGGT...GAGTACTCTGACTACCAGGTCCTCAGGCCCTCTGACCCTCATCAGTGGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGCTAGGCCAGGAATGTTaGCTGGGAAAGGAGGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: IRRITVSKSAPPEEELPRLGQEC*LGKEAR Trigger: CCGAGCCTCCTTTCCCAGCCAACATTCCTGGCCTAG...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGAATGGACATATTTCTTaGAGACAACTCCTTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRNGHIS*RQLLSR Trigger: CCTTGAAAGGAGTTGTCTTCAAGAAATATGTCCATT...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCTACTATGTGAAGCTCTaGGGACAGATCTATTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSYYVKL*GQIYFG Trigger: TCCAAAATAGATCTGTCCTCAGAGCTTCACATAGTA...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCCAGATGTATTCTGGGTaGAAGACTTTGTTTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSQMYSG*KTLFCH Trigger: GTGACAAAACAAAGTCTTTCACCCAGAATACATCTG...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCACCGGACAGGCAGATGTCTTGAGGCTAAAAATCCAGTTCAGGTTTTCAGCAAGTTCCTGGGTGTaGCTGTGCATGCTCACCGTG | + |
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Preference number: 2 (lower is better) Translates to: LSTGQADVLRLKIQFRFSASSWV*LCMLTV Trigger: CACGGTGAGCATGCACAGGCACACCCAGGAACTTGC...TGAAAACCTGAACTGGATTTTTAGCCTCAAGACATCTGCCTGTCCGGTGCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR GCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCACTGATTTCGACCTGTaGTGTTTACTATGTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSTDFDL*CLLCEA Trigger: AGCTTCACATAGTAAACAGCACAGGTCGAAATCAGT...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR CCA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGCAATTTCAGAGTCTTTaGCTAGAAGATTCCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRQFQSL*LEDSFA Trigger: TGCAAAGGAATCTTCTAGCCAAAGACTCTGAAATTG...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
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| 3UTR-3UTR CCA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGAGGACAGATCTATTTTaGAAGACAGTCCTTTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRRTDLF*KTVLSN Trigger: GTTAGAAAGGACTGTCTTCCAAAATAGATCTGTCCT...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 90 bp | GAAGAAAGTACAGTGCCAAAGAGGGGAGGAGGCAAGAGACCTCTCTaGGCAGCTGAGCATCTCTGTGAAACAGAGCTGGGTCTGGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: EESTVPKRGGGKRPL*AAEHLCETELGLEN Trigger: ATTTTCCAGACCCAGCTCTGTTTCACAGAGATGCTCAGCTGCCAAGAGAGGTCTCTTGCCTCCTCCCCTCTTTGGCACTGTACTTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGCACTGGGCAAGCAGATaGAACCCATTCTCCAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: IRRITVSKSAPPEEELPRHWASR*NPFSRD Trigger: ATCCCTGGAGAATGGGTTTCATCTGCTTGCCCAGTG...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAACATGCTCTATTTCTCTCAAAGTGGGTCCTTCAGCCCAGGAGCCTGGACATCCACAAGATGGAGTaGAGGGGACTGACCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IKHALFLSKWVLQPRSLDIHKME*RGLTLL Trigger: CAGAAGGGTCAGTCCCCTTCACTCCATCTTGTGGAT...GTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 90 bp | ACAAGAAAGGTTGGTCCTGCAGTTTCTGCTCAACACAACAGGCGTTaGTTAAGCACCGAAGAAAGTACAGTGCCAAAGAGGGGAGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TRKVGPAVSAQHNRR*LSTEESTVPKRGGG Trigger: GCCTCCTCCCCTCTTTGGCACTGTACTTTCTTCGGTGCTTAACAAACGCCTGTTGTGTTGAGCAGAAACTGCAGGACCAACCTTTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR GCA 90 bp | AGCACCGAAGAAAGTACAGTGCCAAAGAGGGGAGGAGGCAAGAGACCTCTCTTGATGCACACTTGCTACTaGAGGCATCACAAAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: STEESTVPKRGGGKRPLLMHTCY*RHHKRQ Trigger: TTGCCTTTTGTGATGCCTGCAGTAGCAAGTGTGCAT...CAAGAGAGGTCTCTTGCCTCCTCCCCTCTTTGGCACTGTACTTTCTTCGGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR GCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCGCTAGAAGATTCCTTTaGACTTCTGATGCTAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSARRFL*TSDAKI Trigger: AATTTTAGCATCAGAAGTGCAAAGGAATCTTCTAGC...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 90 bp | CAGCCCACACTTGTCTGGAGTGATGTAGAAACGTCTTACTCCTACTaGAGATATGAGGATCTTCTGCCTTGTTGCTTCTCAGGCCACGGA | + |
|
Preference number: 2 (lower is better) Translates to: QPTLVWSDVETSYSY*RYEDLLPCCFSGHG Trigger: TCCGTGGCCTGAGAAGCAACAAGGCAGAAGATCCTCATATCTCAAGTAGGAGTAAGACGTTTCTACATCACTCCAGACAAGTGTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGCTACATGCACTGCCTTaGAGATGGAACTCTGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IRRITVSKSAPPEEELPRLHALP*RWNSVF Trigger: GAAGACAGAGTTCCATCTTCAAGGCAGTGCATGTAG...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAACACCACCAAGTTGGTGGCCACTTCCAGGGTTTCCTGTGTCAGTGGTTCATCAACCATACAATGTaGCTGGTACCACAGTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VKHHQVGGHFQGFLCQWFINHTM*LVPQFQ Trigger: TTGGAACTGTGGTACCAGCCACATTGTATGGTTGAT...GAACCACTGACACAGGAAACCCTGGAAGTGGCCACCAACTTGGTGGTGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAACATGCTCTATTTCTCTCAAAGTGGGTCCTTCAGCCCAGGAGCCTGGACTTTGGTAGGAAGTATTaGGAGCTGTCCCTATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: IKHALFLSKWVLQPRSLDFGRKY*ELSLST Trigger: AGTGGATAGGGACAGCTCTCAATACTTCCTACCAAA...GTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 90 bp | CATGATTTATTGCTAATTTTATTACTAAACTGTTGTCATACGTGGTaGGTGCCAGCGGTGAGCAATGGTGGTGGGCACTGGTGGACTAGG | + |
|
Preference number: 2 (lower is better) Translates to: HDLLLILLLNCCHTW*VPAVSNGGGHWWTR Trigger: CCTAGTCCACCAGTGCCCACCACCATTGCTCACCGCTGGCACCAACCACGTATGACAACAGTTTAGTAATAAAATTAGCAATAAATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR TCA 90 bp | GGTCATTTGAATGGCCTGAGTATGGGATCAAACATGCTCTATTTCTCTCAAAGTACAGGCCACCACCAGTaGGTCCTTTCTTGTGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GHLNGLSMGSNMLYFSQSTGHHQ*VLSCVL Trigger: TAGAACACAAGAAAGGACTCACTGGTGGTGGCCTGT...ACTTTGAGAGAAATAGAGCATGTTTGATCCCATACTCAGGCCATTCAAATGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGCCAGATGTATTCTGGGTGAAAGACTTTGTTTTGTCACTGAGAAAGTCTCGTTTTTCCATGTTTTaGAGAGCTTTGGTAGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KKPDVFWVKDFVLSLRKSRFSMF*RALVGS Trigger: ACTTCCTACCAAAGCTCTGCAAAACATGGAAAAACG...AGACTTTCTCAGTGACAAAACAAAGTCTTTCACCCAGAATACATCTGGCTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGCCAGATGTATTCTGGGTGAAAGACTTTGTTTTGTCACTGAGAAAGTCTGCCTTAAGTAATATTTaGACAGCTGTGAAACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: KKPDVFWVKDFVLSLRKSALSNI*TAVKHH Trigger: GTGGTGTTTCACAGCTGTCCAAATATTACTTAAGGC...AGACTTTCTCAGTGACAAAACAAAGTCTTTCACCCAGAATACATCTGGCTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGCCAGATGTATTCTGGGTGAAAGACTTTGTTTTGTCACTGAGAAAGTCTTCTGGTCATTTGATCTaGACAAACAACCCTGTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: KKPDVFWVKDFVLSLRKSSGHLI*TNNPVY Trigger: ATAAACAGGGTTGTTTGTCCAGATCAAATGACCAGA...AGACTTTCTCAGTGACAAAACAAAGTCTTTCACCCAGAATACATCTGGCTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 90 bp | CCTGTGACCAAGAAGCCAGATGTATTCTGGGTGAAAGACTTTGTTTaGTCACTGAGAAAGTCTAAAGGTTATTATTGCTTTAGAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: PVTKKPDVFWVKDFV*SLRKSKGYYCFRKT Trigger: TGTTTTTCTAAAGCAATAATAACCTTTAGACTTTCTCAGTGACAAAACAAAGTCTTTCACCCAGAATACATCTGGCTTCTTGGTCACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | CCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTaGGGCTCCTGGCACGTCAGCAGCTGGCTAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: PAGGHRTPPQAL*GSWHVSSWLIP Trigger: GGGTATTAGCCAGCTGCTGACGTGCCAGGAGCCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | AGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCTaGAGATGTTCTCTAGTGGCCAAAACCGTGTCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: REKPACLDRGTP*RCSLVAKTVSG Trigger: GCCGGACACGGTTTTGGCCACTAGAGAACATCTGCAGGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| 3UTR TCA 72 bp | TTCCAGGGTTTCCTGTGTCAGTGGTTCCCCCAGCACTaGGTGAGTTCCTGGGTCAGGGACGGAAGCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FQGFLCQWFPQH*VSSWVRDGSCL Trigger: GAGACAGCTTCCGTCCCTGACCCAGGAACTCACTCAGTGCTGGGGGAACCACTGACACAGGAAACCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | GTTTCTGTTCGCATGGGTGATAAGGGCAGGGACTTGTaGCCATGCAGAGGCTCAGGGACAGGCACTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSVRMGDKGRDL*PCRGSGTGTGQ Trigger: TTGCCCAGTGCCTGTCCCTGAGCCTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGGGACAGGCAGATGTCTaGAGGCTAAAAATCCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRGQADV*RLKIQF Trigger: GAACTGGATTTTTAGCCTCAAGACATCTGCCTGTCC...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGAGGTTGGTTCTCCAGTaGTCCTCTAAGAGCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRRLVLQ*SSKSRC Trigger: ACATCTGCTCTTAGAGGACAACTGGAGAACCAACCT...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | CAGTGCCAAAGAGGGGAGGAGGCAAGAGACCTCTCTTaGCAGCTGAGCATCTCTGTGAAACAGAGCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QCQRGEEARDLS*QLSISVKQSWV Trigger: GACCCAGCTCTGTTTCACAGAGATGCTCAGCTGCCAAGAGAGGTCTCTTGCCTCCTCCCCTCTTTGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | TGTGCCTCCGGTTCGATTCACAGCACCTTCTGCCTTTaGCAGCTGGTTCTCACACACGAGGACCAGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CASGSIHSTFCL*QLVLTHEDQMW Trigger: CCACATCTGGTCCTCGTGTGTGAGAACCAGCTGCCAAAGGCAGAAGGTGCTGTGAATCGAACCGGAGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATTGTCCCAACCCTGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGTCTACATGCACTGCCTaGAAGATGGAACTCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLSQPCWRAQNPTSGSVRSTCTA*KMELCL Trigger: AAGACAGAGTTCCATCTTCAAGGCAGTGCATGTAGA...CCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCAGGGTTGGGACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TGTATCAGTGAGGAGTGCTGCTGTCATGGGCAGAACTaGCCCACAGTCCAGGGACAGCAGGACGGGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: CISEECCCHGQN*PTVQGQQDGSF Trigger: AAATGACCCGTCCTGCTGTCCCTGGACTGTGGGTCAGTTCTGCCCATGACAGCAGCACTCCTCACTGATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | CAGTTAGAGCTGGGTCCCTGGGACTCCATGCACACTTaGTACTGCAGGCATCACAAAAGGCAAGCTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLELGPWDSMHT*YCRHHKRQALA Trigger: AGCCAGAGCTTGCCTTTTGTGATGCCTGCAGTAGCAAGTGTGCATGGAGTCCCAGGGACCCAGCTCTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | CTTGTGGCTTCCCCCTGCACAGCTGTTCTCACACTCTaGTCTTCAGGGCTCCATGAGTGGCTTCTACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVASPCTAVLTL*SSGLHEWLLHA Trigger: TGCATGTAGAAGCCACTCATGGAGCCCTGAAGAGCAGAGTGTGAGAACAGCTGTGCAGGGGGAAGCCACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | CAACCATTGGTCAGCGATCAGTTAGAGCTGGGTCCCTaGGACTCCATGCACACTTGCTACTGCAGGCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: QPLVSDQLELGP*DSMHTCYCRHH Trigger: GTGATGCCTGCAGTAGCAAGTGTGCATGGAGTCCCAGGGACCCAGCTCTAACTGATCGCTGACCAATGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | CCGGTTCGATTCACAGCACCTTCTGCCTTTGGCAGCTaGTTCTCACACACGAGGACCAGATGTGGCGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PVRFTAPSAFGS*FSHTRTRCGET Trigger: TGTTTCGCCACATCTGGTCCTCGTGTGTGAGAACCAGCTGCCAAAGGCAGAAGGTGCTGTGAATCGAACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | ATGCAGAGGCTCAGGGACAGGCACTGGGCAAGCAGATaGAACCCATTCTCCAGGGATAGGTGCTATACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MQRLRDRHWASR*NPFSRDRCYTA Trigger: AGCTGTATAGCACCTATCCCTGGAGAATGGGTTTCATCTGCTTGCCCAGTGCCTGTCCCTGAGCCTCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | CTAGAGATGCAGGATGCTATGTCGTCCGTGGAGAGGTaGAATGAGCATGGGTACTGGGCAGCAACCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LEMQDAMSSVER*NEHGYWAATIG Trigger: ACCAATGGTTGCTGCCCAGTACCCATGCTCATTCCACCTCTCCACGGACGACATAGCATCCTGCATCTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | TCTGGAAAATCTAGAGGCGACATCTACCCTGCCTTGTaGCTTCCCCCTGCACAGCTGTTCTCACACTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGKSRGDIYPAL*LPPAQLFSHSA Trigger: AGCAGAGTGTGAGAACAGCTGTGCAGGGGGAAGCCACAAGGCAGGGTAGATGTCGCCTCTAGATTTTCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | ACTTTACTAGGGGACTCAACACTGCTCAAGAACGGATaGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATA | + |
|
Preference number: 3 (lower is better) Translates to: TLLGDSTLLKNG*RQHSGPEAAPI Trigger: TATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCTTGAGCAGTGTTGAGTCCCCTAGTAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGCCACTGATGAGGGTCAGAGGGCCTGAGGACCTGGTAGTCAGAGTACTCCAAGTTAAGGGTGATTaGTGCCAAGAGCTGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLPLMRVRGPEDLVVRVLQVKGD*CQELRR Trigger: TCTCCTCAGCTCTTGGCACAAATCACCCTTAACTTG...GAGTACTCTGACTACCAGGTCCTCAGGCCCTCTGACCCTCATCAGTGGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | CAGCAATTCTCAACCTGTGGGTTGTCACAACCCCTTTaGGGTCTGATGATCCCTTTCAGGGGTCGACGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QQFSTCGLSQPL*GLMIPFRGRRR Trigger: TCTTCGTCGACCCCTGAAAGGGATCATCAGACCCCAAAGGGGTTGTGACAACCCACAGGTTGAGAATTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGCCACTGATGAGGGTCAGAGGGCCTGAGGACCTGGTAGTCAGAGTACTCCTGAGCTCGGGACTTTaGCAATCTTGTAATCACACT | + |
|
Preference number: 3 (lower is better) Translates to: CLPLMRVRGPEDLVVRVLLSSGL*QSCNHT Trigger: AGTGTGATTACAAGATTGCAAAAGTCCCGAGCTCAG...GAGTACTCTGACTACCAGGTCCTCAGGCCCTCTGACCCTCATCAGTGGCAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TTGGGGCCTAAATATAGTCCATGCGTCTGGTTGTTTTaGAACGTGCTACTGCCTGGCTGGGACCTAGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGPKYSPCVWLF*NVLLPGWDLAD Trigger: GTCTGCTAGGTCCCAGCCAGGCAGTAGCACGTTTCAAAACAACCAGACGCATGGACTATATTTAGGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | AGTCTTAGTTCAGTGACTGTAGCTTCTCTGGAGATCTaGACCACAGGGGCCACTTACCCAGAGTGGGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSSVTVASLEI*TTGATYPEWVE Trigger: TTCAACCCACTCTGGGTAAGTGGCCCCTGTGGTGCAGATCTCCAGAGAAGCTACAGTCACTGAACTAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | AATGAGAAGCAAGGGAAGACAGAGTTTCTGTTCGCATaGGTGATAAGGGCAGGGACTTGTGGCCATGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NEKQGKTEFLFA*VIRAGTCGHAE Trigger: CTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGAAACTCTGTCTTCCCTTGCTTCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGCCACTGATGAGGGTCAGAGGGCCTGAGGACCTGGTAGTCAGAGTACTCTCAATTTCAGAGTCTTaGGCTAGAAGATTCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLPLMRVRGPEDLVVRVLSISES*ARRFLC Trigger: GCAAAGGAATCTTCTAGCCAAAGACTCTGAAATTGA...GAGTACTCTGACTACCAGGTCCTCAGGCCCTCTGACCCTCATCAGTGGCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TCAGGGCTCCATGAGTGGCTTCTACATGCACTGCCTTaGAGATGGAACTCTGTCTTCGAAGGCCTTCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SGLHEWLLHALP*RWNSVFEGLHH Trigger: ATGATGAAGGCCTTCGAAGACAGAGTTCCATCTTCAAGGCAGTGCATGTAGAAGCCACTCATGGAGCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | GCCTCCATAGTCTCAAGTTCTGGGGTTGTTATGCCCTaGAAAGGTTGGTTCTCCAGTTGTCCTCTAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASIVSSSGVVMP*KGWFSSCPLRA Trigger: TGCTCTTAGAGGACAACTGGAGAACCAACCTTTGCAGGGCATAACAACCCCAGAACTTGAGACTATGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | GTCTCAAGTTCTGGGGTTGTTATGCCCTGCAAAGGTTaGTTCTCCAGTTGTCCTCTAAGAGCAGATGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSSSGVVMPCKG*FSSCPLRADVA Trigger: TGCCACATCTGCTCTTAGAGGACAACTGGAGAACCAACCTTTGCAGGGCATAACAACCCCAGAACTTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | GGAGTCCGGGGATCCAGGATCGATCAGAACACACCATaGGTACTATATAGTCCCACAGTTTCTGAGAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: GVRGSRIDQNTP*VLYSPTVSERC Trigger: ACATCTCTCAGAAACTGTGGGACTATATAGTACCCATGGTGTGTTCTGATCGATCCTGGATCCCCGGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | GGTCATTTGAATGGCCTGAGTATGGGATCAAACATGCTCTATTTCTCTCAAAGTGACATCTACCCTGCCTaGTGGCTTCCCCCTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GHLNGLSMGSNMLYFSQSDIYPA*WLPPAQ Trigger: CTGTGCAGGGGGAAGCCACAAGGCAGGGTAGATGTC...ACTTTGAGAGAAATAGAGCATGTTTGATCCCATACTCAGGCCATTCAAATGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | AAGCAGGAGACATATATAGACATCCACAAGATGGAGTaGAGGGGACTGACCCTTCTGGATCCACTGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQETYIDIHKME*RGLTLLDPLSA Trigger: AGCTGACAGTGGATCCAGAAGGGTCAGTCCCCTTCACTCCATCTTGTGGATGTCTATATATGTCTCCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | TACTCCTACTTGAGATATGAGGATCTTCTGCCTTGTTaGTTCTCAGGCCACGGAAGGAAGCCTGTGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: YSYLRYEDLLPC*FSGHGRKPVNP Trigger: TGGATTCACAGGCTTCCTTCCGTGGCCTGAGAAGCAACAAGGCAGAAGATCCTCATATCTCAAGTAGGAGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | GAGTATGGGATCAAACATGCTCTATTTCTCTCAAAGTaGGTCCTTCAGCCCAGGAGCCTGGACAATGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EYGIKHALFLSK*VLQPRSLDNES Trigger: TGACTCATTGTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTTTGATCCCATACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGATGTTTTGCAGAGCTTaGGTAGGAAGTATTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: IRRITVSKSAPPEEELPRMFCRA*VGSIES Trigger: GCTCTCAATACTTCCTACCAAAGCTCTGCAAAACAT...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGACGTTTTTCCATGTTTaGCAGAGCTTTGGTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IRRITVSKSAPPEEELPRTFFHV*QSFGRK Trigger: CTTCCTACCAAAGCTCTGCAAAACATGGAAAAACGT...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | TCTACTCAATATCAGGCGCATAACTGTCTCCAAGTCTaGTCCTCCAGAAGAGGAATTACCAAGGCTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: STQYQAHNCLQV*SSRRGITKALS Trigger: AGACAGAGCCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGATATTGAGTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | TTCTCCAGGGATAGGTGCTATACAGCTCTCTCAAGCTaGAAATACACAGGAACAAGGCTGGCCATACTAATC | + |
|
Preference number: 3 (lower is better) Translates to: FSRDRCYTALSS*KYTGTRLAILI Trigger: GATTAGTATGGCCAGCCTTGTTCCTGTGTATTTCCAGCTTGAGAGAGCTGTATAGCACCTATCCCTGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | CACGTCAGCAGCTGGCTAATACCCAAGTGTAGTTCTTaGGGCCTAAATATAGTCCATGCGTCTGGTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HVSSWLIPKCSS*GLNIVHASGCF Trigger: AAAACAACCAGACGCATGGACTATATTTAGGCCCCAAGAACTACACTTGGGTATTAGCCAGCTGCTGACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGCCAGATGTATTCTGGGTGAAAGACTTTGTTTTGTCACTGAGAAAGTCTGGCAAGAGACCTCTCTaGGCAGCTGAGCATCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KKPDVFWVKDFVLSLRKSGKRPL*AAEHLC Trigger: ACAGAGATGCTCAGCTGCCAAGAGAGGTCTCTTGCC...AGACTTTCTCAGTGACAAAACAAAGTCTTTCACCCAGAATACATCTGGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TTTGCACTTCTGATGCTAAAATTCTGCAATTTAGGATaGCTTTATTGCTCAGGCCATCCACAGGCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: FALLMLKFCNLG*LYCSGHPQATT Trigger: GGTGGTGGCCTGTGGATGGCCTGAGCAATAAAGTCATCCTAAATTGCAGAATTTTAGCATCAGAAGTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | AAGCACAACAAGAAGAAGCACAAGAAAGGTTGGTCCTaGAGTTTCTGCTCAACACAACAGGCGTTTGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KHNKKKHKKGWS*SFCSTQQAFVK Trigger: CTTAACAAACGCCTGTTGTGTTGAGCAGAAACTGCAGGACCAACCTTTCTTGTGCTTCTTCTTGTTGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | ACACTTCAGAGGAACACAGCAGAGAGCACTGCTCTGTaGAACTTGCTAGAGTTTTTCCAAACTCTAGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: TLQRNTAESTAL*NLLEFFQTLVI Trigger: AATGACTAGAGTTTGGAAAAACTCTAGCAAGTTGCACAGAGCAGTGCTCTCTGCTGTGTTCCTCTGAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | AGGGGACTGACCCTTCTGGATCCACTGTCAGCTACATaGATCAACTTCCGAAACATAATTCAATGGACATAT | + |
|
Preference number: 3 (lower is better) Translates to: RGLTLLDPLSAT*INFRNIIQWTY Trigger: ATATGTCCATTGAATTATGTTTCGGAAGTTGATTCATGTAGCTGACAGTGGATCCAGAAGGGTCAGTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TGGTCATTTGATCTGGACAAACAACCCTGTTTATCCTaGGCTCGGGACTTTTGCAATCTTGTAATCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: WSFDLDKQPCLS*ARDFCNLVITL Trigger: CAGTGTGATTACAAGATTGCAAAAGTCCCGAGCTCAGGATAAACAGGGTTGTTTGTCCAGATCAAATGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TTTTTCCATGTTTTGCAGAGCTTTGGTAGGAAGTATTaGGAGCTGTCCCTATCCACTAGAGAGAAACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FFHVLQSFGRKY*ELSLSTREKQA Trigger: AGCTTGTTTCTCTCTAGTGGATAGGGACAGCTCTCAATACTTCCTACCAAAGCTCTGCAAAACATGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | CTGATTTCGACCTGTGCTGTTTACTATGTGAAGCTCTaGGGACAGATCTATTTTGGAAGACAGTCCTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LISTCAVYYVKL*GQIYFGRQSFL Trigger: TAGAAAGGACTGTCTTCCAAAATAGATCTGTCCTCAGAGCTTCACATAGTAAACAGCACAGGTCGAAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR TCA 72 bp | TCACTGACACACAGTATTCTTAACTCATACTGGATGTaGCAACAGCTTTGGAGAGAGATGTGGTATATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SLTHSILNSYWM*QQLWREMWYIL Trigger: CAGTATATACCACATCTCTCTCCAAAGCTGTTGTCACATCCAGTATGAGTTAAGAATACTGTGTGTCAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CCA 72 bp | TGTTTACTATGTGAAGCTCTGAGGACAGATCTATTTTaGAAGACAGTCCTTTCTAACCGGGATCTTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLLCEALRTDLF*KTVLSNRDLHF Trigger: AAAGTGAAGATCCCGGTTAGAAAGGACTGTCTTCCAAAATAGATCTGTCCTCAGAGCTTCACATAGTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR GCA 72 bp | TTTTCAATTTCAGAGTCTTTGGCTAGAAGATTCCTTTaGACTTCTGATGCTAAAATTCTGCAATTTAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FSISESLARRFL*TSDAKILQFRM Trigger: CATCCTAAATTGCAGAATTTTAGCATCAGAAGTGCAAAGGAATCTTCTAGCCAAAGACTCTGAAATTGAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCGCCTTGTTTGCAGGTTaGGTGCCAGGCTCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSALFAG*VPGSSV Trigger: CACTGAAGAGCCTGGCACTCAACCTGCAAACAAGGC...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCGCATGGGTGATAAGGGCAGGGACTTGTGGCCATGCAGAGGCTCAGGGAGCAGGGTGAGCACCTaGTGGGTGGTCATAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRMGDKGRDLWPCRGSGSRVST*WVVIVL Trigger: CAGCACTATGACCACCCAGCAGGTGCTCACCCTGCT...CCCTGAGCCTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGGCCTTGTTTGCAGGTTaGGTGCCAGGCTCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAFPLYLVSPEGRSLPAWALFAG*VPGSSV Trigger: CACTGAAGAGCCTGGCACTCAACCTGCAAACAAGGC...CCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAAGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGCTCCTGGCACGTCAGATCTCCGGAAACCTCTaGCTTGTTTGCAGGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CWRAQNPTSGSVRLLARQISGNL*LVCRLS Trigger: ACTCAACCTGCAAACAAGGCAGAGGTTTCCGGAGAT...CTGACGTGCCAGGAGCCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | CCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACTGGGCTTCGCTTGGTaGCCGGGATTTGGACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYLVSPEGRSLPAWTEVLGFAW*PGFGPP Trigger: AGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAG...TACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | TACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCTAGCAGGGTGAGCACCTaGTGGGTGGTCATAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLVSPEGRSLPAWTEVRPSRVST*WVVIVL Trigger: CAGCACTATGACCACCCAGCAGGTGCTCACCCTGCT...AGGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | GTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCGGGACCTTGCTGTCCTaGGGTGAAGCTTCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSRREKPACLDRGTPGTLLS*GEASFW Trigger: CCAAAAGGAAGCTTCACCCCAGGACAGCAAGGTCCC...GGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | AGAACGGATGGAGGCAACACAGTGGCCCAGAAGCAGCCCCGATACACACGCTCCAGGGTGAGCACCTGCTaGGTGGTCATAGTGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTDGGNTVAQKQPRYTRSRVSTC*VVIVLL Trigger: TAACAGCACTATGACCACCCAGCAGGTGCTCACCCT...GGAGCGTGTGTATCGGGGCTGCTTCTGGGCCACTGTGTTGCCTCCATCCGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | AGAGTTTCTGTTCGCATGGGTGATAAGGGCAGGGACTaGTGGCCATGCAGAGGCTCAGGGACAGGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSVRMGDKGRD*WPCRGSGTGTG Trigger: CCCAGTGCCTGTCCCTGAGCCTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGAAACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGTCGCTGACAGGAACATaGGAGCTGGAAGAGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAFPLYLVSPEGRSLPAWSLTGT*ELEEQA Trigger: AGCTTGCTCTTCCAGCTCTCATGTTCCTGTCAGCGA...CCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR TCA 90 bp | ACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCTGTCTCGGTGTCTTAGCTaGAAGCTCCTGCCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TWCLQKGEACLLGQRYALSRCLS*KLLPSW Trigger: CCATGAAGGCAGGAGCTTTCAGCTAAGACACCGAGA...CAGGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAGGGCACAGAACCCCACCTCAGGCTCTGTGAGGCTCCTGGCACGTCAGCCATCAAGAAGATCTTaGCAATTTTCTCACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CWRAQNPTSGSVRLLARQPSRRS*QFSHRA Trigger: GGCCCTGTGAGAAAATTGTCAAGATCTTCTTGATGG...CTGACGTGCCAGGAGCCTCACAGAGCCTGAGGTGGGGTTCTGTGCCCTCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | CCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGATCATCCTGCATCTaGAGCCGGATGGGTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLYLVSPEGRSLPAWTEVRSSCI*SRMGRL Trigger: CAGACGACCCATCCGGCTGCAGATGCAGGATGATCG...TACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | GTGAAACACCACCAAGTTGGTGGCCACTTCCAGGGTTTCCTGTGTCAGTGGTTCCTGGGCTTCGCTTGGTaGCCGGGATTTGGACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKHHQVGGHFQGFLCQWFLGFAW*PGFGPP Trigger: AGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAG...GAACCACTGACACAGGAAACCCTGGAAGTGGCCACCAACTTGGTGGTGTTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | CTGTGCCTCCGGTTCGATTCACAGCACCTTCTGCCTTaGGCAGCTGGTTCTCACACACGAGGACCAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRFDSQHLLP*AAGSHTRGPDV Trigger: CACATCTGGTCCTCGTGTGTGAGAACCAGCTGCCAAAGGCAGAAGGTGCTGTGAATCGAACCGGAGGCACAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | GTGAAACACCACCAAGTTGGTGGCCACTTCCAGGGTTTCCTGTGTCAGTGGTTCCGATCATCCTGCATCTaGAGCCGGATGGGTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKHHQVGGHFQGFLCQWFRSSCI*SRMGRL Trigger: CAGACGACCCATCCGGCTGCAGATGCAGGATGATCG...GAACCACTGACACAGGAAACCCTGGAAGTGGCCACCAACTTGGTGGTGTTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCGCATGGGTGATAAGGGCAGGGACTTGTGGCCATGCAGAGGCTCAGGGAGAGTGCAAACTCACTaGGACCATCTTCTACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVRMGDKGRDLWPCRGSGRVQTH*DHLLPG Trigger: TCCGGGTAGAAGATGGTCCCAGTGAGTTTGCACTCT...CCCTGAGCCTCTGCATGGCCACAAGTCCCTGCCCTTATCACCCATGCGAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | GGGTCTGGAAAATCTAGAGGCGACATCTACCCTGCCTaGTGGCTTCCCCCTGCACAGCTGTTCTCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGKSRGDIYPA*WLPPAQLFSHS Trigger: AGAGTGTGAGAACAGCTGTGCAGGGGGAAGCCACAAGGCAGGGTAGATGTCGCCTCTAGATTTTCCAGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | CACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACTGTACTTGCTGTCGCTaGCAGGAACATGAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCTWCLQKGEACLLGQRYCTCCR*QEHESW Trigger: CCAGCTCTCATGTTCCTGTCAGCGACAGCAAGTACA...GTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAACCCATAGGCAGGAGTaGACACTGAGGTCTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTVLGVSRREKPACLDRTHRQE*TLRSCG Trigger: ACCACAAGACCTCAGTGTTCACTCCTGCCTATGGGT...TCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | GTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCATCTCCGGAAACCTCTaGCTTGTTTGCAGGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSRREKPACLDRGTPISGNL*LVCRLS Trigger: ACTCAACCTGCAAACAAGGCAGAGGTTTCCGGAGAT...GGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGTTCTCACAGGGCCCATaGAGGATTCTGGATATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QAFPLYLVSPEGRSLPAWFSQGP*RILDIS Trigger: ACTGATATCCAGAATCCTGCATGGGCCCTGTGAGAA...CCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAAGGGTGAGCACCTGCTaGGTGGTCATAGTGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPTVLGVSRREKPACLDRRVSTC*VVIVLL Trigger: TAACAGCACTATGACCACCCAGCAGGTGCTCACCCT...TCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | TGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCAGAGTGCAAACTCACTaGGACCATCTTCTACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTWCLQKGEACLLGQRYARVQTH*DHLLPG Trigger: TCCGGGTAGAAGATGGTCCCAGTGAGTTTGCACTCT...GGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | CCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTAGCCCATGCAGGATTCTaGATATCAGTGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYLVSPEGRSLPAWTEVAHAGF*ISVGTR Trigger: GCGAGTACCCACTGATATCCAGAATCCTGCATGGGC...TACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR TCA 90 bp | GTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCTATAAAAATGTCCATTaGTGGAGAACCGGTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSRREKPACLDRGTPYKNVH*WRTGAV Trigger: GACGGCACCGGTTCTCCATCAATGGACATTTTTATA...GGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | CCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTAACCTCCTCTGGATTATaGAGCTGGCATCGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLYLVSPEGRSLPAWTEVTSSGL*SWHRSL Trigger: CAAAGAGCGATGCCAGCTGCATAATCCAGAGGAGGT...TACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | ATCAAACATGCTCTATTTCTCTCAAAGTGGGTCCTTCAGCCCAGGAGCCTGGACTGTCCGCATAAGCTGTaGGACCTCCTCCTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKHALFLSKWVLQPRSLDCPHKL*DLLLFP Trigger: GGGGAAGAGGAGGAGGTCCCACAGCTTATGCGGACA...GTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | TACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACGCCCTCCATCAAGAAGATCTTaGCAATTTTCTCACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLVSPEGRSLPAWTEVRPPSRRS*QFSHRA Trigger: GGCCCTGTGAGAAAATTGTCAAGATCTTCTTGATGG...AGGGCGTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGCAGGAACATGAGAGCTaGAAGAGCAAGCTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLYLVSPEGRSLPAWTEQEHES*KSKLPS Trigger: TGAAGGAAGCTTGCTCTTCCAGCTCTCATGTTCCTG...CTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR TCA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGTCGCTGACAGGAACATaGGAGCTGGAAGAGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRRITVSKSAPPEEELPRSLTGT*ELEEQA Trigger: AGCTTGCTCTTCCAGCTCTCATGTTCCTGTCAGCGA...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGTTAGCTGAAAGCTCCTaGCTTCATGGTAGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPLYLVSPEGRSLPAWTELAESS*LHGSSC Trigger: ACAACTGCTACCATGAAGGCAGGAGCTTTCAGCTAA...CTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAGGCCATATCTCACGACTGTTGGCAGCTCCTGCTCCAGAATGGTTCCTTTCTCACAGGGCCCATaGAGGATTCTGGATATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRPYLTTVGSSCSRMVPFSQGP*RILDIS Trigger: ACTGATATCCAGAATCCTGCATGGGCCCTGTGAGAA...AGGAACCATTCTGGAGCAGGAGCTGCCAACAGTCGTGAGATATGGCCTGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR CCA 90 bp | ATCAGGCGCATAACTGTCTCCAAGTCTGCTCCTCCAGAAGAGGAATTACCAAGGGCCCATGCAGGATTCTaGATATCAGTGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRRITVSKSAPPEEELPRAHAGF*ISVGTR Trigger: GCGAGTACCCACTGATATCCAGAATCCTGCATGGGC...CCTTGGTAATTCCTCTTCTGGAGGAGCAGACTTGGAGACAGTTATGCGCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | CAGTTCCAAGGCTCTTTATTACCACGTAGGCCAGCTTaGCGCATAGATCCTAGCCAGCAAGTTCCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFQGSLLPRRPA*RIDPSQQVPGC Trigger: ACACCCAGGAACTTGCTGGCTAGGATCTATGCGCAAAGCTGGCCTACGTGGTAATAAAGAGCCTTGGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | TGCTCCTCCAGAAGAGGAATTACCAAGGCTCTGTCTTaGTTCCTCCAGGGTCTAGCACAGGCCTGGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSRRGITKALS*FLQGLAQAWHK Trigger: TTTATGCCAGGCCTGTGCTAGACCCTGGAGGAACAAAGACAGAGCCTTGGTAATTCCTCTTCTGGAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | ACTGACCCACAGTCCAGGGACAGCAGGACGGGTCATTaGAATGGCCTGAGTATGGGATCAAACATGCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TDPQSRDSRTGH*NGLSMGSNMLY Trigger: ATAGAGCATGTTTGATCCCATACTCAGGCCATTCAAATGACCCGTCCTGCTGTCCCTGGACTGTGGGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | CTGAGCACCGGACAGGCAGATGTCTTGAGGCTAAAAATCCAGTTCAGGTTTTCATGTACTTGCTGTCGCTaGCAGGAACATGAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGQADVLRLKIQFRFSCTCCR*QEHESW Trigger: CCAGCTCTCATGTTCCTGTCAGCGACAGCAAGTACA...TGAAAACCTGAACTGGATTTTTAGCCTCAAGACATCTGCCTGTCCGGTGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | AGTCTCAAGTTCTGGGGTTGTTATGCCCTGCAAAGGTaGGTTCTCCAGTTGTCCTCTAAGAGCAGATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLKFWGCYALQR*VLQLSSKSRCG Trigger: GCCACATCTGCTCTTAGAGGACAACTGGAGAACCAACCTTTGCAGGGCATAACAACCCCAGAACTTGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | GTCCACAGACCTCAGGAGAAGAAGCTGGCCTTTAGTTTGCTGTTAGACAATCATTCTCGGTGTCTTAGCTaGAAGCTCCTGCCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VHRPQEKKLAFSLLLDNHSRCLS*KLLPSW Trigger: CCATGAAGGCAGGAGCTTTCAGCTAAGACACCGAGA...ATGATTGTCTAACAGCAAACTAAAGGCCAGCTTCTTCTCCTGAGGTCTGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGCACCGGACAGGCAGATGTCTTGAGGCTAAAAATCCAGTTCAGGTTTTCAACCTCCTCTGGATTATaGAGCTGGCATCGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGQADVLRLKIQFRFSTSSGL*SWHRSL Trigger: CAAAGAGCGATGCCAGCTGCATAATCCAGAGGAGGT...TGAAAACCTGAACTGGATTTTTAGCCTCAAGACATCTGCCTGTCCGGTGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR CCA 90 bp | AGCTCTGTCTCAAGGAAAGCAGGAGACATATATAGACATCCACAAGATGGAGTGGGGACCTTGCTGTCCTaGGGTGAAGCTTCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSRKAGDIYRHPQDGVGTLLS*GEASFW Trigger: CCAAAAGGAAGCTTCACCCCAGGACAGCAAGGTCCC...CACTCCATCTTGTGGATGTCTATATATGTCTCCTGCTTTCCTTGAGACAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | GTTGGTCCTGCAGTTTCTGCTCAACACAACAGGCGTTaGTTAAGCACCGAAGAAAGTACAGTGCCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPAVSAQHNRR*LSTEESTVPKR Trigger: CCTCTTTGGCACTGTACTTTCTTCGGTGCTTAACAAACGCCTGTTGTGTTGAGCAGAAACTGCAGGACCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | ATCAAACATGCTCTATTTCTCTCAAAGTGGGTCCTTCAGCCCAGGAGCCTGGACTATAAAAATGTCCATTaGTGGAGAACCGGTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IKHALFLSKWVLQPRSLDYKNVH*WRTGAV Trigger: GACGGCACCGGTTCTCCATCAATGGACATTTTTATA...GTCCAGGCTCCTGGGCTGAAGGACCCACTTTGAGAGAAATAGAGCATGTTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR CCA 90 bp | GTCCACAGACCTCAGGAGAAGAAGCTGGCCTTTAGTTTGCTGTTAGACAATCATCAGGAACATGAGAGCTaGAAGAGCAAGCTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHRPQEKKLAFSLLLDNHQEHES*KSKLPS Trigger: TGAAGGAAGCTTGCTCTTCCAGCTCTCATGTTCCTG...ATGATTGTCTAACAGCAAACTAAAGGCCAGCTTCTTCTCCTGAGGTCTGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | AAAACAGCTACATCAGCTACAAAAGGCCCAAAGGGATaGAGATTAGGCAGGCAGTCAAAGAGTGGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTATSATKGPKG*RLGRQSKSGGV Trigger: AACGCCACCACTCTTTGACTGCCTGCCTAATCTCAATCCCTTTGGGCCTTTTGTAGCTGATGTAGCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | TTGCTAATTTTATTACTAAACTGTTGTCATACGTGGTaGGTGCCAGCGGTGAGCAATGGTGGTGGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLILLLNCCHTW*VPAVSNGGGHW Trigger: CCAGTGCCCACCACCATTGCTCACCGCTGGCACCAACCACGTATGACAACAGTTTAGTAATAAAATTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | GGTCATTTGAATGGCCTGAGTATGGGATCAAACATGCTCTATTTCTCTCAAAGTACCCATAGGCAGGAGTaGACACTGAGGTCTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLNGLSMGSNMLYFSQSTHRQE*TLRSCG Trigger: ACCACAAGACCTCAGTGTTCACTCCTGCCTATGGGT...ACTTTGAGAGAAATAGAGCATGTTTGATCCCATACTCAGGCCATTCAAATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | GGTCATTTGAATGGCCTGAGTATGGGATCAAACATGCTCTATTTCTCTCAAAGTAACCTCTGCCTTGTTTaGAGGTTGAGTGCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHLNGLSMGSNMLYFSQSNLCLV*RLSARL Trigger: GAGCCTGGCACTCAACCTGCAAACAAGGCAGAGGTT...ACTTTGAGAGAAATAGAGCATGTTTGATCCCATACTCAGGCCATTCAAATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | TTGAGATTAGGCAGGCAGTCAAAGAGTGGTGGCGTTTaGGAAGGAGACAAATGTGAGGAAAGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLGRQSKSGGV*EGDKCEERKEQ Trigger: TTGCTCCTTTCTTTCCTCACATTTGTCTCCTTCCAAAACGCCACCACTCTTTGACTGCCTGCCTAATCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR CCA 90 bp | AGCTCTGTCTCAAGGAAAGCAGGAGACATATATAGACATCCACAAGATGGAGTGGTTAGACGCAAGGCTTaGAACTTCATGGTCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSRKAGDIYRHPQDGVVRRKA*NFMVSL Trigger: CAAACTGACCATGAAGTTCCAAGCCTTGCGTCTAAC...CACTCCATCTTGTGGATGTCTATATATGTCTCCTGCTTTCCTTGAGACAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | CAGAGGAACACAGCAGAGAGCACTGCTCTGTGCAACTaGCTAGAGTTTTTCCAAACTCTAGTCATTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRNTAESTALCN*LEFFQTLVIQK Trigger: TTTCTGAATGACTAGAGTTTGGAAAAACTCTAGCAAGTTGCACAGAGCAGTGCTCTCTGCTGTGTTCCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | AATGCACTGAGACTACTAGTCATGAGTCGTAAGTCTTaGTTGCCTCACTTAAAGGTAGAGAGAGCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NALRLLVMSRKS*LPHLKVERASF Trigger: GAAGGATGCTCTCTCTACCTTTAAGTGAGGCAACAAAGACTTACGACTCATGACTAGTAGTCTCAGTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGCTCTGTCTCAAGGAAAGCAGGAGACATATATAGACATCCACAAGATAGCAGTTGTAGGTTTTaGGCAGGCTTAAGAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETSSVSRKAGDIYRHPQDSSCRF*AGLRVL Trigger: CAGAACTCTTAAGCCTGCTCAAAACCTACAACTGCT...ATCTTGTGGATGTCTATATATGTCTCCTGCTTTCCTTGAGACAGAGCTTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR GCA 90 bp | GAAACAAGCTCTGTCTCAAGGAAAGCAGGAGACATATATAGACATCCACAAGATTTAGCTGAAAGCTCCTaGCTTCATGGTAGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETSSVSRKAGDIYRHPQDLAESS*LHGSSC Trigger: ACAACTGCTACCATGAAGGCAGGAGCTTTCAGCTAA...ATCTTGTGGATGTCTATATATGTCTCCTGCTTTCCTTGAGACAGAGCTTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | TTTTGTTCCTTAGACCCTGGTCTTCACATAAGTGTTTaGCTACACATGCAGGTGTACGTACATGTACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCSLDPGLHISV*LHMQVYVHVHE Trigger: CTCATGTACATGTACGTACACCTGCATGTGTAGCAAAACACTTATGTGAAGACCAGGGTCTAAGGAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| 3UTR CAA 72 bp | AAGAAGCCAGATGTATTCTGGGTGAAAGACTTTGTTTaGTCACTGAGAAAGTCTAAAGGTTATTATTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKPDVFWVKDFV*SLRKSKGYYCF Trigger: AAAGCAATAATAACCTTTAGACTTTCTCAGTGACAAAACAAAGTCTTTCACCCAGAATACATCTGGCTTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS GCA 90 bp | GGCACCCATGTGGCAGACGGCAGGTGCACTCGCTCCCGATCATCCTaGATCTGCAGCCGGATGGGTCGTCTGAGTCCCCAGGCAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTHVADGRCTRSRSS*ICSRMGRLSPQAML Trigger: CAACATTGCCTGGGGACTCAGACGACCCATCCGGCTGCAGATGCAGGATGATCGGGAGCGAGTGCACCTGCCGTCTGCCACATGGGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 ENSMUST00000204576.2 |
||
| CDS GCA 90 bp | ATTGATGGAGAACCGGTGCCGTCGTATCTTCTGGGCTTCGCTTGGTaGCCGGGATTTGGACCTCCTCTGGATTATGCAGCTGGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: IDGEPVPSYLLGFAW*PGFGPPLDYAAGIA Trigger: AGCGATGCCAGCTGCATAATCCAGAGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAGAAGATACGACGGCACCGGTTCTCCATCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CCA 90 bp | TCCATTGATGGAGAACCGGTGCCGTCGTATCTTCTGGGCTTCGCTTaGTGCCCGGGATTTGGACCTCCTCTGGATTATGCAGCTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SIDGEPVPSYLLGFA*CPGFGPPLDYAAGI Trigger: GATGCCAGCTGCATAATCCAGAGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAGAAGATACGACGGCACCGGTTCTCCATCAATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS-3UTR CAA 90 bp | CACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACAGTCCCCAGGCAATGTaGAGGAGTCCTTCGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: HCTWCLQKGEACLLGQRYSPQAM*RSPSMI Trigger: GATCATCGAAGGACTCCTCAACATTGCCTGGGGACT...GTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS TCA 90 bp | CATGGGGCACCTCCTCGCTCAAGTCAGCTTCCATCAAGAAGATCTTaGCAATTTTCTCACAGGGCCCATGCAGGATTCTGGATATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGAPPRSSQLPSRRS*QFSHRAHAGFWISV Trigger: CACTGATATCCAGAATCCTGCATGGGCCCTGTGAGAAAATTGTCAAGATCTTCTTGATGGAAGCTGACTTGAGCGAGGAGGTGCCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS-3UTR CAA 90 bp | CACTGTACTTGGTGTCTCCAGAAGGGAGAAGCCTGCCTGCTTGGACAGAGGTACCGCAATCTTTTAATTTaGTCTGCTCCCCAGACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HCTWCLQKGEACLLGQRYRNLLI*SAPQTH Trigger: ATGAGTCTGGGGAGCAGACAAAATTAAAAGATTGCG...GTACCTCTGTCCAAGCAGGCAGGCTTCTCCCTTCTGGAGACACCAAGTACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203029.3 |
||
| CDS-3UTR CAA 90 bp | GTCCACAGACCTCAGGAGAAGAAGCTGGCCTTTAGTTTGCTGTTAGACAATCATAGTCCCCAGGCAATGTaGAGGAGTCCTTCGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: VHRPQEKKLAFSLLLDNHSPQAM*RSPSMI Trigger: GATCATCGAAGGACTCCTCAACATTGCCTGGGGACT...ATGATTGTCTAACAGCAAACTAAAGGCCAGCTTCTTCTCCTGAGGTCTGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS TCA 90 bp | GTCTTAGCTGAAAGCTCCTGCCTTCATGGTAGCAGTTGTAGGTTTTaGGCAGGCTTAAGAGTTCTGACTTCAGAATGTACTTGCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VLAESSCLHGSSCRF*AGLRVLTSECTCCR Trigger: GCGACAGCAAGTACATTCTGAAGTCAGAACTCTTAAGCCTGCTCAAAACCTACAACTGCTACCATGAAGGCAGGAGCTTTCAGCTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGCTCTGTCTCAAGGAAAGCAGGAGACATATATAGACATCCACAAGATCCAGACGCTGCAGCATaGTTAGACGCAAGGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETSSVSRKAGDIYRHPQDPDAAA*LDARLG Trigger: TCCAAGCCTTGCGTCTAACAATGCTGCAGCGTCTGG...ATCTTGTGGATGTCTATATATGTCTCCTGCTTTCCTTGAGACAGAGCTTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS-3UTR CAA 90 bp | ATGCACTGCCTTGAAGATGGAACTCTGTCTTCGAAGGCCTTCATCATACTTCTCCGCAATCTTTTAATTTaGTCTGCTCCCCAGACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MHCLEDGTLSSKAFIILLRNLLI*SAPQTH Trigger: ATGAGTCTGGGGAGCAGACAAAATTAAAAGATTGCG...GAGAAGTATGATGAAGGCCTTCGAAGACAGAGTTCCATCTTCAAGGCAGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035842.7 |
||
| CDS GCA 90 bp | TCAGCTTCCATCAAGAAGATCTTGACAATTTTCTCACAGGGCCCATaGAGGATTCTGGATATCAGTGGGTACTCGCAATCTTTTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SASIKKILTIFSQGP*RILDISGYSQSFNF Trigger: AAAATTAAAAGATTGCGAGTACCCACTGATATCCAGAATCCTGCATGGGCCCTGTGAGAAAATTGTCAAGATCTTCTTGATGGAAGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CCA 72 bp | GGAGAACCGGTGCCGTCGTATCTTCTGGGCTTCGCTTaGTGCCCGGGATTTGGACCTCCTCTGGATTATGCA | + |
|
Preference number: 6 (lower is better) Translates to: GEPVPSYLLGFA*CPGFGPPLDYA Trigger: TGCATAATCCAGAGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAGAAGATACGACGGCACCGGTTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CCA 72 bp | TGTCCATTGATGGAGAACCGGTGCCGTCGTATCTTCTaGGCTTCGCTTGGTGCCCGGGATTTGGACCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLMENRCRRIF*ASLGARDLDLL Trigger: GAGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAGAAGATACGACGGCACCGGTTCTCCATCAATGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CAA 72 bp | TGGAGAACCGGTGCCGTCGTATCTTCTGGGCTTCGCTaGGTGCCCGGGATTTGGACCTCCTCTGGATTATGC | + |
|
Preference number: 6 (lower is better) Translates to: WRTGAVVSSGLR*VPGIWTSSGLC Trigger: GCATAATCCAGAGGAGGTCCAAATCCCGGGCACCAAGCGAAGCCCAGAAGATACGACGGCACCGGTTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS TCA 72 bp | GAGCTATCTCCGGAAACCTCTGCCTTGTTTGCAGGTTaGGTGCCAGGCTCTTCAGTGGGGACCTTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELSPETSALFAG*VPGSSVGTLLS Trigger: GGACAGCAAGGTCCCCACTGAAGAGCCTGGCACTCAACCTGCAAACAAGGCAGAGGTTTCCGGAGATAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CAA 72 bp | TGCAGCCGGATGGGTCGTCTGAGTCCCCAGGCAATGTaGAGGAGTCCTTCGATGATCAGAGTCCCTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSRMGRLSPQAM*RSPSMIRVPSS Trigger: GGAAGAAGGGACTCTGATCATCGAAGGACTCCTCAACATTGCCTGGGGACTCAGACGACCCATCCGGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 ENSMUST00000204576.2 |
||
| CDS GCA 72 bp | TCTACCCGGAACTTGTTTAGTAGCAGGGTGAGCACCTaGTGGGTGGTCATAGTGCTGTTAACCCGGACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: STRNLFSSRVST*WVVIVLLTRTL Trigger: CAACGTCCGGGTTAACAGCACTATGACCACCCAGCAGGTGCTCACCCTGCTACTAAACAAGTTCCGGGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CCA 72 bp | AAACTGTCCAGCACCGGCATTTCGAACTTAATGTACTaGGCAACATCATGGGGCACCTCCTCGCTCAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: KLSSTGISNLMY*ATSWGTSSLKS Trigger: TGACTTGAGCGAGGAGGTGCCCCATGATGTTGCCCAGTACATTAAGTTCGAAATGCCGGTGCTGGACAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CAA 90 bp | TCATGGGGCACCTCCTCGCTCAAGTCAGCTTCCATCAAGAAGATCTaGACAATTTTCTCACAGGGCCCATGCAGGATTCTGGATATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SWGTSSLKSASIKKI*TIFSQGPCRILDIS Trigger: ACTGATATCCAGAATCCTGCATGGGCCCTGTGAGAAAATTGTCAAGATCTTCTTGATGGAAGCTGACTTGAGCGAGGAGGTGCCCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
||
| CDS CAA 72 bp | ACCTCCTCGCTCAAGTCAGCTTCCATCAAGAAGATCTaGACAATTTTCTCACAGGGCCCATGCAGGATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSLKSASIKKI*TIFSQGPCRIL Trigger: CAGAATCCTGCATGGGCCCTGTGAGAAAATTGTCAAGATCTTCTTGATGGAAGCTGACTTGAGCGAGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
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| CDS CAA 90 bp | CATGCAGGATTCTGGATATCAGTGGGTACTCGCAATCTTTTAATTTaGTCTGCTCCCCAGACTCATGGACGGTGTAGAGTGCAAACTCAC | + |
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Preference number: 6 (lower is better) Translates to: HAGFWISVGTRNLLI*SAPQTHGRCRVQTH Trigger: GTGAGTTTGCACTCTACACCGTCCATGAGTCTGGGGAGCAGACAAAATTAAAAGATTGCGAGTACCCACTGATATCCAGAATCCTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
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| CDS TCA 72 bp | TTAAGAGTTCTGACTTCAGAATGTACTTGCTGTCGCTaGCAGGAACATGAGAGCTGGAAGAGCAAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRVLTSECTCCR*QEHESWKSKLP Trigger: AGGAAGCTTGCTCTTCCAGCTCTCATGTTCCTGTCAGCGACAGCAAGTACATTCTGAAGTCAGAACTCTTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
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| CDS CAA 72 bp | TTCTGGATATCAGTGGGTACTCGCAATCTTTTAATTTaGTCTGCTCCCCAGACTCATGGACGGTGTAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: FWISVGTRNLLI*SAPQTHGRCRV Trigger: CACTCTACACCGTCCATGAGTCTGGGGAGCAGACAAAATTAAAAGATTGCGAGTACCCACTGATATCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035842.7 ENSMUST00000203029.3 |
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