Pregenerated sensors for RASSF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025795Ensembl transcript IDs: ENSMUST00000026902.9
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCCTCAGCCCAGAGCTCATGCTTCCAAGCACGCTGGGATGCCTaGTGCCCAAAGGCTCACAGCTTGCGAGAGGTAACATCGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: GASAQSSCFQARWDA*CPKAHSLREVTSPC Trigger: GCATGGCGATGTTACCTCTCGCAAGCTGTGAGCCTTTGGGCATCAGGCATCCCAGCGTGCTTGGAAGCATGAGCTCTGGGCTGAGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR GCA 90 bp | ACAGGGGGCCTCAGCCCAGAGCTCATGCTTCCAAGCACGCTGGGATaGCTGATGCCCAAAGGCTCACAGCTTGCGAGAGGTAACATCGCC | + |
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Preference number: 1 (lower is better) Translates to: TGGLSPELMLPSTLG*LMPKGSQLARGNIA Trigger: GGCGATGTTACCTCTCGCAAGCTGTGAGCCTTTGGGCATCAGGCATCCCAGCGTGCTTGGAAGCATGAGCTCTGGGCTGAGGCCCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR CCA 90 bp | CCGCTCCACGCCAGCGGGTCTCAGAACCAGCGGGTCCAGAACCAGTaGATCTCAGAACAGATGTACAGGTCAAGTCCAGCTGAGGCACAC | + |
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Preference number: 1 (lower is better) Translates to: PLHASGSQNQRVQNQ*ISEQMYRSSPAEAH Trigger: GTGTGCCTCAGCTGGACTTGACCTGTACATCTGTTCTGAGATCCACTGGTTCTGGACCCGCTGGTTCTGAGACCCGCTGGCGTGGAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR CCA 90 bp | GGCTTTGACAACTGTGTCTACAGAGAAAAGAGGAAGACCCTAGAGTaGCCGGGCCACGAAGACAGCTCTCTGAGAAGAGAGGCAACCAAC | + |
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Preference number: 1 (lower is better) Translates to: GFDNCVYREKRKTLE*PGHEDSSLRREATN Trigger: GTTGGTTGCCTCTCTTCTCAGAGAGCTGTCTTCGTGGCCCGGCCACTCTAGGGTCTTCCTCTTTTCTCTGTAGACACAGTTGTCAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR CCA 90 bp | GACAGATTCTCGATAGAAGGCACGGTTCATAGAAAGGCTAAGAGCTaGGGCACCTTGGAATTTCCAAACGATTCCATCGGGTGTCACCGT | + |
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Preference number: 1 (lower is better) Translates to: DRFSIEGTVHRKAKS*GTLEFPNDSIGCHR Trigger: ACGGTGACACCCGATGGAATCGTTTGGAAATTCCAAGGTGCCCCAGCTCTTAGCCTTTCTATGAACCGTGCCTTCTATCGAGAATCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR GCA 90 bp | TTTCCTTCCTTGGGGCCCTTAGTTAAGTCTCTGAAGAGGCAAGGATaGAGTAGGACCCGGCCTTTAATCAACATCCCTGTCTTCTACTTT | + |
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Preference number: 1 (lower is better) Translates to: FPSLGPLVKSLKRQG*SRTRPLINIPVFYF Trigger: AAAGTAGAAGACAGGGATGTTGATTAAAGGCCGGGTCCTACTGCATCCTTGCCTCTTCAGAGACTTAACTAAGGGCCCCAAGGAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR GCA 90 bp | CAAGCTGCTGTGGAAAGTGAGGCCATTGCGCCTGTCTATTGCACATaGGTCTCTTTGGTTGGAAGGAACATGCTCGCTTGTGTTAAAATA | + |
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Preference number: 1 (lower is better) Translates to: QAAVESEAIAPVYCT*VSLVGRNMLACVKI Trigger: TATTTTAACACAAGCGAGCATGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR TCA 90 bp | CTTCCTTTATGCTTTAAAACAACGGCTGCTGTAGTAACCAGTGTTTaGGCGAGAACATCGGTCTTCAGGAACCTCGGACTGGCAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: LPLCFKTTAAVVTSV*ARTSVFRNLGLADL Trigger: AAGATCTGCCAGTCCGAGGTTCCTGAAGACCGATGTTCTCGCTCAAACACTGGTTACTACAGCAGCCGTTGTTTTAAAGCATAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | CCCACCTACACAGAGAAGCTAAACCCCAGGCCATCCGCTCCACGCCAGCGGGTCGCGCAAGATGCTGCGTaGCCAGGCTTTGACAACTGT | + |
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Preference number: 2 (lower is better) Translates to: PTYTEKLNPRPSAPRQRVAQDAA*PGFDNC Trigger: ACAGTTGTCAAAGCCTGGTCACGCAGCATCTTGCGC...GACCCGCTGGCGTGGAGCGGATGGCCTGGGGTTTAGCTTCTCTGTGTAGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR CAA 90 bp | CACAGCTTGCGAGAGGTAACATCGCCATGCCAAAACAGAACAAGCTaGTGGAGTCCCTTGTGCCAGTCCCTCGTGAGGCGCAAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: HSLREVTSPCQNRTS*WSPLCQSLVRRKML Trigger: CAGCATCTTGCGCCTCACGAGGGACTGGCACAAGGGACTCCACAAGCTTGTTCTGTTTTGGCATGGCGATGTTACCTCTCGCAAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTGCACGCTGGGATGCCTaGTGCCCAAAGGCTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPARWDA*CPKAHS Trigger: GCTGTGAGCCTTTGGGCATCAGGCATCCCAGCGTGC...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGAACATACCTCCCCGAGCCCTaGGCCCTTACCTTCCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: VRPLRLSIAHASLWLEGTYLPEP*ALTFPL Trigger: TAGAGGGAAGGTAAGGGCCCAGGGCTCGGGGAGGTA...TGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | AACTCTTTTCCCAGTCCCCCAGAGTTCCTAAATTCCTGTGTCCTTCAGTTCAGGTGCGTCCCAGAACAGTaGCTTCCGGGCAGGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NSFPSPPEFLNSCVLQFRCVPEQ*LPGRES Trigger: GCTCTCCCTGCCCGGAAGGCACTGTTCTGGGACGCA...CCTGAACTGAAGGACACAGGAATTTAGGAACTCTGGGGGACTGGGAAAAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGAACACCAAGCACGCTGGGATaGCTGATGCCCAAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VRPLRLSIAHASLWLEGTPSTLG*LMPKGS Trigger: TGAGCCTTTGGGCATCAGGCATCCCAGCGTGCTTGG...TGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTCAGGTCAAGTCCAGCTaGGGCACACCTACCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPQVKSS*GTPTCG Trigger: TCCACAGGTAGGTGTGCCTCAGCTGGACTTGACCTG...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGGATCCCTTTGGGCTTAGCTCCTGGCTCTTTGGCTCTGACCCCACATTTAACGCGACTCTCTTGTaGGTCCCAGAACAGTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: FVDPFGLSSWLFGSDPTFNATLL*VPEQCL Trigger: AAGGCACTGTTCTGGGACGCACAAGAGAGTCGCGTT...AAATGTGGGGTCAGAGCCAAAGAGCCAGGAGCTAAGCCCAAAGGGATCCACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGGATTGTCACAAAGTGTaGTGTGAGCCCTGGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: ESEAIAPVYCTCVSLVGRDCHKV*CEPWPC Trigger: GCAAGGCCAGGGCTCACAGCACACTTTGTGACAATC...CCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCCGATTTGCAAGCTGCTGTGGAAAGTGAGGCCATTGCGCCTGTCTATTGCACTGAAGAGGCAAGGATaGAGTAGGACCCGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SPICKLLWKVRPLRLSIALKRQG*SRTRPL Trigger: TAAAGGCCGGGTCCTACTGCATCCTTGCCTCTTCAG...TGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAATCGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGAGGCACACCTACCTGTaGACCACCTCAGTCAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: ESEAIAPVYCTCVSLVGRRHTYL*TTSVKV Trigger: AACCTTGACTGAGGTGGTCCACAGGTAGGTGTGCCT...CCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGACTTTGAAGAGTGATTaGGGCTGGGAGGCGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PWNFQTIPSGVTVLTIPWTLKSD*GWEAGE Trigger: CTCCCCCGCCTCCCAGCCCCAATCACTCTTCAAAGT...CCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATTCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTGGCCTTTGCGTGACCAGGCTTTaGCAACTGTGTCTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CNKRKRVIVTKCAVSPGLCVTRL*QLCLQR Trigger: TCTCTGTAGACACAGTTGTCAAAGCCTGGTCACGCA...AAGGCCAGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | AACGGCTGCTGTAGTAACCAGTGTTTGAGCGAGAACATCGGTCTTCAGGAACCTCTGGCTCTTTGGCTCTaGCCCCACATTTTACCACTA | + |
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Preference number: 2 (lower is better) Translates to: NGCCSNQCLSENIGLQEPLALWL*PHILPL Trigger: TAGTGGTAAAATGTGGGGTCAGAGCCAAAGAGCCAG...AGGTTCCTGAAGACCGATGTTCTCGCTCAAACACTGGTTACTACAGCAGCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGAATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGAGCTGCTGTGGAAAGTaGGGCCATTGCGCCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: PWNFQTIPSGVTVLTIPWSCCGK*GHCACL Trigger: TAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCT...CCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATTCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGAACACAGAGGAAAGGAGGATaGAATAAACGGAAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VRPLRLSIAHASLWLEGTQRKGG*NKRKRV Trigger: CACCCTCTTCCGTTTATTGCATCCTCCTTTCCTCTG...TGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGTCCTTCAGTTCAGGTaGGTAGGGCTGCTCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: PWNFQTIPSGVTVLTIPWVLQFR*VGLLQQ Trigger: CTGTTGGAGCAGCCCTACCCACCTGAACTGAAGGAC...CCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATTCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | AATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGAATTTACAGGGATCAGCACATaGCCAGGCCCCACCTACACA | + |
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Preference number: 2 (lower is better) Translates to: NFQTIPSGVTVLTIPWEFTGIST*PGPTYT Trigger: TGTGTAGGTGGGGCCTGGCCATGTGCTGATCCCTGT...AAATTCCCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | ATATCTCTTTGGCCTCTGGGGCTCCTTTTCTTCCCTTATGCTTTATGCTTCCTTAGAAGACCAGGTGGCTaGTGGCAGCATACACAAACC | + |
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Preference number: 2 (lower is better) Translates to: ISLWPLGLLFFPYALCFLRRPGG*WQHTQT Trigger: GGTTTGTGTATGCTGCCACCAGCCACCTGGTCTTCT...AAGGAAGCATAAAGCATAAGGGAAGAAAAGGAGCCCCAGAGGCCAAAGAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | AACGGCTGCTGTAGTAACCAGTGTTTGAGCGAGAACATCGGTCTTCAGGAACCTTGCTCCAACAGAGAATaGAAACATGCAGGTAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: NGCCSNQCLSENIGLQEPCSNRE*KHAGSF Trigger: GAAACTACCTGCATGTTTTCATTCTCTGTTGGAGCA...AGGTTCCTGAAGACCGATGTTCTCGCTCAAACACTGGTTACTACAGCAGCCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | AATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGAATTTTTTCTAGCTAACAGCTaGGGGGAAGCAGCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: NFQTIPSGVTVLTIPWEFFLANS*GEAAAP Trigger: AGGGGCAGCTGCTTCCCCTCAGCTGTTAGCTAGAAA...AAATTCCCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCCGATTTGCAAGCTGCTGTGGAAAGTGAGGCCATTGCGCCTGTCTATTGCACTTAAAGCTCATCTTTaGATCCTGAAGGTTACCAGA | + |
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Preference number: 2 (lower is better) Translates to: SPICKLLWKVRPLRLSIALKAHL*ILKVTR Trigger: TCTGGTAACCTTCAGGATGCAAAGATGAGCTTTAAG...TGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAATCGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | ATATCTCTTTGGCCTCTGGGGCTCCTTTTCTTCCCTTATGCTTTATGCTTCCTTCGGGTCCAGAACCAGTaGATCTCAGAACAGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: ISLWPLGLLFFPYALCFLRVQNQ*ISEQMY Trigger: GTACATCTGTTCTGAGATCCACTGGTTCTGGACCCG...AAGGAAGCATAAAGCATAAGGGAAGAAAAGGAGCCCCAGAGGCCAAAGAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGCGTCTAACAGTGTCTTAATCAGAGAAACCAATGCCTCACAAACGCTAGGCTGTTGTGCAGTCAGCTaGGTGTGGACTTTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LASNSVLIRETNASQTLGCCAVS*VWTFLP Trigger: AGGAAGGAAAGTCCACACCCAGCTGACTGCACAACA...GCCTAGCGTTTGTGAGGCATTGGTTTCTCTGATTAAGACACTGTTAGACGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR TCA 90 bp | AATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGAATTTTCACAAAGTGTGCTGTaGGCCCTGGCCTTGCTATAT | + |
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Preference number: 2 (lower is better) Translates to: NFQTIPSGVTVLTIPWEFSQSVL*ALALLY Trigger: ATATAGCAAGGCCAGGGCTCACAGCACACTTTGTGA...AAATTCCCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | AATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGAATTTATTTGCAAGCTGCTGTaGAAAGTGAGGCCATTGCGC | + |
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Preference number: 2 (lower is better) Translates to: NFQTIPSGVTVLTIPWEFICKLL*KVRPLR Trigger: GCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAAT...AAATTCCCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR GCA 90 bp | AATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGAATTTCCTGTCTATTGCACATaGGTCTCTTTGGTTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NFQTIPSGVTVLTIPWEFPVYCT*VSLVGR Trigger: CCTTCCAACCAAAGAGACGCATGTGCAATAGACAGG...AAATTCCCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCGAAGAGAAAACAGCATTATAGCAAAGCTGGCTTTCGCTTTACCGGAGAATATATATATATCTCTTTaGCCTCTGGGGCTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: FRRENSIIAKLAFALPENIYISL*PLGLLF Trigger: GAAAAGGAGCCCCAGAGGCCAAAGAGATATATATAT...ATTCTCCGGTAAAGCGAAAGCCAGCTTTGCTATAATGCTGTTTTCTCTTCGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR GCA 72 bp | TCTCTGAGAAGAGAGGCAACCAACGCGACTCTCTTGTaGGTCCCAGAACAGTGCCTTCCGGGCAGGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SLRREATNATLL*VPEQCLPGRES Trigger: GCTCTCCCTGCCCGGAAGGCACTGTTCTGGGACGCACAAGAGAGTCGCGTTGGTTGCCTCTCTTCTCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR GCA 72 bp | CTCAGCCCAGAGCTCATGCTTCCAAGCACGCTGGGATaGCTGATGCCCAAAGGCTCACAGCTTGCGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: LSPELMLPSTLG*LMPKGSQLARG Trigger: ACCTCTCGCAAGCTGTGAGCCTTTGGGCATCAGGCATCCCAGCGTGCTTGGAAGCATGAGCTCTGGGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR GCA 72 bp | CCGGAATCGGAACACCCTTCCCTCGGCTCTCCGATTTaGAAGCTGCTGTGGAAAGTGAGGCCATTGCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PESEHPSLGSPI*KLLWKVRPLRL Trigger: CAGGCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAATCGGAGAGCCGAGGGAAGGGTGTTCCGATTCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR TCA 72 bp | GCCCAGAGCTCATGCTTCCAAGCACGCTGGGATGCCTaGTGCCCAAAGGCTCACAGCTTGCGAGAGGTAACA | + |
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Preference number: 3 (lower is better) Translates to: AQSSCFQARWDA*CPKAHSLREVT Trigger: TGTTACCTCTCGCAAGCTGTGAGCCTTTGGGCATCAGGCATCCCAGCGTGCTTGGAAGCATGAGCTCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR TCA 72 bp | CGGTCTTCAGGAACCTCGGACTGGCAGATCTTCAGGTaGAGTGCACACGCCATCGAGCGAGGTTTGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RSSGTSDWQIFR*SAHAIERGLEA Trigger: TGCCTCCAAACCTCGCTCGATGGCGTGTGCACTTCACCTGAAGATCTGCCAGTCCGAGGTTCCTGAAGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR TCA 72 bp | CCCTCGGCTCTCCGATTTGCAAGCTGCTGTGGAAAGTaGGGCCATTGCGCCTGTCTATTGCACATGCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: PSALRFASCCGK*GHCACLLHMRL Trigger: GAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAATCGGAGAGCCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR CCA 72 bp | GCCAGCGGGTCTCAGAACCAGCGGGTCCAGAACCAGTaGATCTCAGAACAGATGTACAGGTCAAGTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ASGSQNQRVQNQ*ISEQMYRSSPA Trigger: AGCTGGACTTGACCTGTACATCTGTTCTGAGATCCACTGGTTCTGGACCCGCTGGTTCTGAGACCCGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR CCA 72 bp | TCTTCAGGTGAAGTGCACACGCCATCGAGCGAGGTTTaGAGGCATACGGAGGAGGGAGCTGCTTCATACAGT | + |
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Preference number: 3 (lower is better) Translates to: SSGEVHTPSSEV*RHTEEGAASYS Trigger: ACTGTATGAAGCAGCTCCCTCCTCCGTATGCCTCCAAACCTCGCTCGATGGCGTGTGCACTTCACCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTAGCTTGTGGAGTCCCTaGTGCCAGTCCCTCGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPSLWSP*CQSLVR Trigger: CCTCACGAGGGACTGGCACAAGGGACTCCACAAGCT...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR TCA 72 bp | CTTGTGCCAGTCCCTCGTGAGGCGCAAGATGCTGCGTaGCCAGGCTTTGACAACTGTGTCTACAGAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LVPVPREAQDAA*PGFDNCVYREK Trigger: CTTTTCTCTGTAGACACAGTTGTCAAAGCCTGGTCACGCAGCATCTTGCGCCTCACGAGGGACTGGCACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTACCAACGCGACTCTCTaGTGCGTCCCAGAACAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPTNATL*CVPEQC Trigger: GCACTGTTCTGGGACGCACAAGAGAGTCGCGTTGGT...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR GCA 72 bp | GCTGCTGTGGAAAGTGAGGCCATTGCGCCTGTCTATTaGACATGCGTCTCTTTGGTTGGAAGGAACATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AAVESEAIAPVY*TCVSLVGRNML Trigger: GAGCATGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CCA 72 bp | AACTGTGTCTACAGAGAAAAGAGGAAGACCCTAGAGTaGCCGGGCCACGAAGACAGCTCTCTGAGAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NCVYREKRKTLE*PGHEDSSLRRE Trigger: CTCTCTTCTCAGAGAGCTGTCTTCGTGGCCCGGCCACTCTAGGGTCTTCCTCTTTTCTCTGTAGACACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CCA 72 bp | GCTAGGCACACTGGGAGGAGTAGTCAGAAGACCAGGTaGCTGGTGGCAGCATACACAAACCCAATGGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARHTGRSSQKTR*LVAAYTNPMVK Trigger: TTTTACCATTGGGTTTGTGTATGCTGCCACCAGCCACCTGGTCTTCTGACTACTCCTCCCAGTGTGCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGAACACAAAACAGAACAAGCTaGTGGAGTCCCTTGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VRPLRLSIAHASLWLEGTQNRTS*WSPLCQ Trigger: CTGGCACAAGGGACTCCACAAGCTTGTTCTGTTTTG...TGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR GCA 72 bp | TTGGGGCCCTTAGTTAAGTCTCTGAAGAGGCAAGGATaGAGTAGGACCCGGCCTTTAATCAACATCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGPLVKSLKRQG*SRTRPLINIPV Trigger: GACAGGGATGTTGATTAAAGGCCGGGTCCTACTGCATCCTTGCCTCTTCAGAGACTTAACTAAGGGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR GCA 72 bp | GTGGAAAGTGAGGCCATTGCGCCTGTCTATTGCACATaGGTCTCTTTGGTTGGAAGGAACATGCTCGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VESEAIAPVYCT*VSLVGRNMLAC Trigger: ACAAGCGAGCATGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCGATTTGCAAGCTGCTGTGGAAAGTGAGGCCATTGCGCCTGTCTATTGCACTCTACCTTCCCGACTaGCTCTCTACTTTCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPICKLLWKVRPLRLSIALYLPD*LSTFFV Trigger: GACAAAGAAAGTAGAGAGCAAGTCGGGAAGGTAGAG...TGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAATCGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR GCA 72 bp | GCCCTGGGCCCTTACCTTCCCTCTACCTTCCCGACTTaGTCTCTACTTTCTTTGTCAAAACTCTTCCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: ALGPYLPSTFPT*SLLSLSKLFQT Trigger: AGTTTGGAAGAGTTTTGACAAAGAAAGTAGAGAGCAAGTCGGGAAGGTAGAGGGAAGGTAAGGGCCCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CCA 72 bp | TCGATAGAAGGCACGGTTCATAGAAAGGCTAAGAGCTaGGGCACCTTGGAATTTCCAAACGATTCCATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SIEGTVHRKAKS*GTLEFPNDSIG Trigger: CCCGATGGAATCGTTTGGAAATTCCAAGGTGCCCCAGCTCTTAGCCTTTCTATGAACCGTGCCTTCTATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR TCA 72 bp | TGCTTTAAAACAACGGCTGCTGTAGTAACCAGTGTTTaGGCGAGAACATCGGTCTTCAGGAACCTCGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: CFKTTAAVVTSV*ARTSVFRNLGL Trigger: CAGTCCGAGGTTCCTGAAGACCGATGTTCTCGCTCAAACACTGGTTACTACAGCAGCCGTTGTTTTAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CCA 72 bp | CCAGAGTTCCTAAATTCCTGTGTCCTTCAGTTCAGGTaGGTAGGGCTGCTCCAACAGAGAATGAAAACATGC | + |
|
Preference number: 3 (lower is better) Translates to: PEFLNSCVLQFR*VGLLQQRMKTC Trigger: GCATGTTTTCATTCTCTGTTGGAGCAGCCCTACCCACCTGAACTGAAGGACACAGGAATTTAGGAACTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGAATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGTTAGCTCCTGGCTCTTaGGCTCTGACCCCACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: PWNFQTIPSGVTVLTIPWLAPGS*ALTPHF Trigger: AAAATGTGGGGTCAGAGCCAAAGAGCCAGGAGCTAA...CCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATTCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGTTTGTAAGAACAACTTaGAAGAGTGATTGGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ESEAIAPVYCTCVSLVGRFVRTT*KSDWGW Trigger: CCAGCCCCAATCACTCTTCAAAGTTGTTCTTACAAA...CCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTCTTTGGCCTCTGGGGCTCCTTTTCTTCCCTTATGCTTTATGCTTCCTTCATGCGTCTCTTTGGTaGGAAGGAACATGCTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISLWPLGLLFFPYALCFLHASLW*EGTCSL Trigger: AAGCGAGCATGTTCCTTCCAACCAAAGAGACGCATG...AAGGAAGCATAAAGCATAAGGGAAGAAAAGGAGCCCCAGAGGCCAAAGAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCGAAGAGAAAACAGCATTATAGCAAAGCTGGCTTTCGCTTTACCGGAGAATTATATATATATCTCTTaGGCCTCTGGGGCTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FRRENSIIAKLAFALPENYIYIS*ASGAPF Trigger: AAAAGGAGCCCCAGAGGCCAAAGAGATATATATATA...ATTCTCCGGTAAAGCGAAAGCCAGCTTTGCTATAATGCTGTTTTCTCTTCGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CCA 72 bp | GGTTTAAAATATATATATATATATCTCTTTGGCCTCTaGGGCTCCTTTTCTTCCCTTATGCTTTATGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLKYIYIYLFGL*GSFSSLMLYAS Trigger: GGAAGCATAAAGCATAAGGGAAGAAAAGGAGCCCCAGAGGCCAAAGAGATATATATATATATATTTTAAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTAACGCTAACTTAGAAGCCACACTACCTCCCCGAGCCCTGGGCCCTTACCCGGAGGCGCTCTCCTaGAGAAGGAGGTCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSNANLEATLPPRALGPYPEALS*RRRSWR Trigger: CCGCCAGGACCTCCTTCTTCAGGAGAGCGCCTCCGG...GTAAGGGCCCAGGGCTCGGGGAGGTAGTGTGGCTTCTAAGTTAGCGTTAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGAATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGTGCAGCCACCGCTGCTaGGCTCGGGAGAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PWNFQTIPSGVTVLTIPWCSHRC*ARERAG Trigger: CCCAGCCCTCTCCCGAGCCCAGCAGCGGTGGCTGCA...CCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATTCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CAA 72 bp | CGAGAGGTAACATCGCCATGCCAAAACAGAACAAGCTaGTGGAGTCCCTTGTGCCAGTCCCTCGTGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: REVTSPCQNRTS*WSPLCQSLVRR Trigger: GCGCCTCACGAGGGACTGGCACAAGGGACTCCACAAGCTTGTTCTGTTTTGGCATGGCGATGTTACCTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | AACTCTTTTCCCAGTCCCCCAGAGTTCCTAAATTCCTGTGTCCTTCAGTTCAGGTCATGCAGCCACCGCTaGTGGGCTCGGGAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSFPSPPEFLNSCVLQFRSCSHR*WARERA Trigger: AGCCCTCTCCCGAGCCCAGCAGCGGTGGCTGCATGA...CCTGAACTGAAGGACACAGGAATTTAGGAACTCTGGGGGACTGGGAAAAGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCGATTTGCAAGCTGCTGTGGAAAGTGAGGCCATTGCGCCTGTCTATTGCACGCCGCTTCAGGCTCTaGAGCTGCTCATCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPICKLLWKVRPLRLSIARRFRL*SCSSSS Trigger: GGAAGAGGATGAGCAGCTGCAGAGCCTGAAGCGGCG...TGCAATAGACAGGCGCAATGGCCTCACTTTCCACAGCAGCTTGCAAATCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CAA 72 bp | TCCCTCGTGAGGCGCAAGATGCTGCGTGACCAGGCTTaGACAACTGTGTCTACAGAGAAAAGAGGAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVRRKMLRDQA*TTVSTEKRGRP Trigger: GGGTCTTCCTCTTTTCTCTGTAGACACAGTTGTCAAAGCCTGGTCACGCAGCATCTTGCGCCTCACGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGGTGGCAGCATACACAAACCCAATGGTAAAACCAGTACAAGAACCACGGCAGCTCCGGTAGGCTaGAAGCTTCCCACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAGGSIHKPNGKTSTRTTAAPVG*KLPTLQ Trigger: TTGGAGAGTGGGAAGCTTTCAGCCTACCGGAGCTGC...CGTGGTTCTTGTACTGGTTTTACCATTGGGTTTGTGTATGCTGCCACCAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTTGTGAAGCGTGTTCATaGAGCCACCGCTGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPCEACS*SHRCWA Trigger: AGCCCAGCAGCGGTGGCTGCATGAACACGCTTCACA...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | TGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTGGCCTTAGGGCTGGGCAGGTTTaGAGAGTTCCATCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CNKRKRVIVTKCAVSPGLRAGQV*RVPSAP Trigger: AGGTGCAGATGGAACTCTGCAAACCTGCCCAGCCCT...AAGGCCAGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | AACTCTTTTCCCAGTCCCCCAGAGTTCCTAAATTCCTGTGTCCTTCAGTTCAGGCCCGGTCGGAGAGCTTaGAGGCATACACTTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSFPSPPEFLNSCVLQFRPGRRA*RHTLGL Trigger: AAGACCAAGTGTATGCCTGCAAGCTCTCCGACCGGG...CCTGAACTGAAGGACACAGGAATTTAGGAACTCTGGGGGACTGGGAAAAGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTTCACCAGAAACTTCCTaGGCAGAGCCTCGATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPSPETS*AEPRSL Trigger: AAGTGATCGAGGCTCTGCTCAGGAAGTTTCTGGTGA...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGATGCAATAAACGGAAGAGGGTGATTGTCACAAAGTGTGCTGTGAGCCCTAAAGCGCAAACTTGGTaGGACTCTCGGTCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGCNKRKRVIVTKCAVSPKAQTW*DSRSPE Trigger: TTCTGGTGACCGAGAGTCCCACCAAGTTTGCGCTTT...AGGGCTCACAGCACACTTTGTGACAATCACCCTCTTCCGTTTATTGCATCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGAACATTGCAGAGTTCCATCTaGACCTTAATGAAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRPLRLSIAHASLWLEGTLQSSI*TLMKPV Trigger: CACTGGCTTCATTAAGGTGCAGATGGAACTCTGCAA...TGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| 3UTR CAA 72 bp | GAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTaGGTTGGAAGGAACATGCTCGCTTGTGTTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EAIAPVYCTCVS*VGRNMLACVKI Trigger: TATTTTAACACAAGCGAGCATGTTCCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | AATTTCCAAACGATTCCATCGGGTGTCACCGTGTTAACAATTCCTTGGGAATTTTTCAGGCTCTGCAGCTaGTCATCCTCTTCCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFQTIPSGVTVLTIPWEFFRLCS*SSSSLS Trigger: GGACAAGGAAGAGGATGAGCAGCTGCAGAGCCTGAA...AAATTCCCAAGGAATTGTTAACACGGTGACACCCGATGGAATCGTTTGGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR TCA 90 bp | TATATATATATATATCTCTTTGGCCTCTGGGGCTCCTTTTCTTCCCTTATGCTTAGGAGGTCCTGGCGGTaGAGAAAAAGTCCTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIYIYLFGLWGSFSSLMLRRSWR*RKSPRP Trigger: AGGACGAGGACTTTTTCTTCACCGCCAGGACCTCCT...AAGCATAAGGGAAGAAAAGGAGCCCCAGAGGCCAAAGAGATATATATATATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR GCA 90 bp | AACGGCTGCTGTAGTAACCAGTGTTTGAGCGAGAACATCGGTCTTCAGGAACCTCACTCTCCAATTTCATaGTCTCGAAGAACAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: NGCCSNQCLSENIGLQEPHSPIS*SRRTKL Trigger: TAGTTTTGTTCTTCGAGAGCATGAAATTGGAGAGTG...AGGTTCCTGAAGACCGATGTTCTCGCTCAAACACTGGTTACTACAGCAGCCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS GCA 90 bp | AGGGTGTCGGTTCTGGGCCCTGCTACCAAACGTAGGTACAGCGGGTaGTCCCGGTCGGAGAGCTTGCAGGCATACACTTGGTCTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSVLGPATKRRYSG*SRSESLQAYTWSSR Trigger: CCGGGAAGACCAAGTGTATGCCTGCAAGCTCTCCGACCGGGAGCACCCGCTGTACCTACGTTTGGTAGCAGGGCCCAGAACCGACACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS TCA 90 bp | AGCAGAGCCTCGATCACTTCCCCCACGGTGTTTGTACTGCTGATGTaGAGCGTGTTCATGCAGCCACCGCTGCTGGGCTCGGGAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRASITSPTVFVLLM*SVFMQPPLLGSGEG Trigger: GCCCTCTCCCGAGCCCAGCAGCGGTGGCTGCATGAACACGCTTCACATCAGCAGTACAAACACCGTGGGGGAAGTGATCGAGGCTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR CAA 90 bp | CTAAACCCCAGGCCATCCGCTCCACGCCAGCGGGTCTCAGAACCAGCGGGTCCATGCTCATCCTCTTCCTaGTCCAAGATGCGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNPRPSAPRQRVSEPAGPCSSSS*SKMRRK Trigger: CTTCCTGCGCATCTTGGACAAGGAAGAGGATGAGCA...TGGACCCGCTGGTTCTGAGACCCGCTGGCGTGGAGCGGATGGCCTGGGGTTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR CAA 90 bp | CCCACCTACACAGAGAAGCTAAACCCCAGGCCATCCGCTCCACGCCAGCGGGTCAAGGTCATCTTCAGCTaGTCTGTAACGGCTGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: PTYTEKLNPRPSAPRQRVKVIFS*SVTAEL Trigger: CAATTCAGCCGTTACAGACAAGCTGAAGATGACCTT...GACCCGCTGGCGTGGAGCGGATGGCCTGGGGTTTAGCTTCTCTGTGTAGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGAGGCCATTGCGCCTGTCTATTGCACATGCGTCTCTTTGGTTGGAAGGGAGGGCTGGGCAGGTTaGCAGAGTTCCATCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ESEAIAPVYCTCVSLVGREGWAG*QSSICT Trigger: GGTGCAGATGGAACTCTGCAAACCTGCCCAGCCCTC...CCTTCCAACCAAAGAGACGCATGTGCAATAGACAGGCGCAATGGCCTCACTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS GCA 90 bp | TGCAGCTGCTCATCCTCTTCCTTGTCCAAGATGCGCAGGAAGTTCTaGAGCTCCGGTAGGCTGAAAGCTTCCCACTCTCCAATTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCSSSSLSKMRRKF*SSGRLKASHSPISC Trigger: GCATGAAATTGGAGAGTGGGAAGCTTTCAGCCTACCGGAGCTGCAGAACTTCCTGCGCATCTTGGACAAGGAAGAGGATGAGCAGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS GCA 90 bp | TTCTGCAGCTCCGGTAGGCTGAAAGCTTCCCACTCTCCAATTTCATaGTCTCGAAGAACAAAACTAAGGGTGTCGGTTCTGGGCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FCSSGRLKASHSPIS*SRRTKLRVSVLGPA Trigger: AGCAGGGCCCAGAACCGACACCCTTAGTTTTGTTCTTCGAGAGCATGAAATTGGAGAGTGGGAAGCTTTCAGCCTACCGGAGCTGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS GCA 72 bp | GTTCTGGGCCCTGCTACCAAACGTAGGTACAGCGGGTaGTCCCGGTCGGAGAGCTTGCAGGCATACACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLGPATKRRYSG*SRSESLQAYTW Trigger: CCAAGTGTATGCCTGCAAGCTCTCCGACCGGGAGCACCCGCTGTACCTACGTTTGGTAGCAGGGCCCAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS GCA 72 bp | AACGTAGGTACAGCGGGTGCTCCCGGTCGGAGAGCTTaGAGGCATACACTTGGTCTTCCCGGTGACAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: NVGTAGAPGRRA*RHTLGLPGDNA Trigger: AGCGTTGTCACCGGGAAGACCAAGTGTATGCCTGCAAGCTCTCCGACCGGGAGCACCCGCTGTACCTACGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS CCA 72 bp | TTCATGCAGCCACCGCTGCTGGGCTCGGGAGAGGGCTaGGCAGGTTTGCAGAGTTCCATCTGCACCTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: FMQPPLLGSGEG*AGLQSSICTLM Trigger: CATTAAGGTGCAGATGGAACTCTGCAAACCTGCCCAGCCCTCTCCCGAGCCCAGCAGCGGTGGCTGCATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS TCA 72 bp | TCGATCACTTCCCCCACGGTGTTTGTACTGCTGATGTaGAGCGTGTTCATGCAGCCACCGCTGCTGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SITSPTVFVLLM*SVFMQPPLLGS Trigger: CGAGCCCAGCAGCGGTGGCTGCATGAACACGCTTCACATCAGCAGTACAAACACCGTGGGGGAAGTGATCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS TCA 72 bp | GAGCCTCGATCACTTCCCCCACGGTGTTTGTACTGCTaGTGTGAAGCGTGTTCATGCAGCCACCGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EPRSLPPRCLYC*CEACSCSHRCW Trigger: CCAGCAGCGGTGGCTGCATGAACACGCTTCACATCAGCAGTACAAACACCGTGGGGGAAGTGATCGAGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS TCA 72 bp | CAAACTTGGTGGGACTCTCGGTCACCAGAAACTTCCTaGGCAGAGCCTCGATCACTTCCCCCACGGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QTWWDSRSPETS*AEPRSLPPRCL Trigger: CAAACACCGTGGGGGAAGTGATCGAGGCTCTGCTCAGGAAGTTTCTGGTGACCGAGAGTCCCACCAAGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS GCA 72 bp | TCATCCTCTTCCTTGTCCAAGATGCGCAGGAAGTTCTaGAGCTCCGGTAGGCTGAAAGCTTCCCACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSLSKMRRKF*SSGRLKASHSP Trigger: TGGAGAGTGGGAAGCTTTCAGCCTACCGGAGCTGCAGAACTTCCTGCGCATCTTGGACAAGGAAGAGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
||
| CDS TCA 72 bp | CCAAGATGCGCAGGAAGTTCTGCAGCTCCGGTAGGCTaGAAGCTTCCCACTCTCCAATTTCATGCTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PRCAGSSAAPVG*KLPTLQFHALE Trigger: TTCGAGAGCATGAAATTGGAGAGTGGGAAGCTTTCAGCCTACCGGAGCTGCAGAACTTCCTGCGCATCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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| CDS GCA 72 bp | TCCGGTAGGCTGAAAGCTTCCCACTCTCCAATTTCATaGTCTCGAAGAACAAAACTAAGGGTGTCGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SGRLKASHSPIS*SRRTKLRVSVL Trigger: CAGAACCGACACCCTTAGTTTTGTTCTTCGAGAGCATGAAATTGGAGAGTGGGAAGCTTTCAGCCTACCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026902.9 |
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