Pregenerated sensors for RASSF10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098132Ensembl transcript IDs: ENSMUST00000182858.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCACTCTCCAGACCCATCCGTGGGAACTCTGAGCTCACCCCCATaGCCTCACTTCATGTCCCTGAGCAGGCCAAACCAGTGCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: THSPDPSVGTLSSPP*PHFMSLSRPNQCIL Trigger: CAGAATGCACTGGTTTGGCCTGCTCAGGGACATGAAGTGAGGCCATGGGGGTGAGCTCAGAGTTCCCACGGATGGGTCTGGAGAGTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 90 bp | GAGGAGTTCAGGAGGACATGCTCCCATTGGGGACACTCAGACAGGTaGTCACGAATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: EEFRRTCSHWGHSDR*SRMGRNSSKSHASV Trigger: TACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCTGAGTGTCCCCAATGGGAGCATGTCCTCCTGAACTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 90 bp | AGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATTaGATCATGAATTACAAGCCAGCACCTCTGCCTTTGCAGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: SRLHPLLQLPLLNCN*IMNYKPAPLPLQKH Trigger: GTGTTTCTGCAAAGGCAGAGGTGCTGGCTTGTAATTCATGATTCAATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR CCA 90 bp | GGAGGACATGCTCCCATTGGGGACACTCAGACAGGTGATCACGAATaGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTG | + |
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Preference number: 1 (lower is better) Translates to: GGHAPIGDTQTGDHE*EETVPNPTLLYISL Trigger: CAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCTGAGTGTCCCCAATGGGAGCATGTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTCCCTCTAAAGCTTAGAAGCTTAGGGCTTCCTTGTCCAGGACCCTCCTTCCATCCGTGGGAACTCTaGGCTCACCCCCATGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HFPLKLRSLGLPCPGPSFHPWEL*AHPHGL Trigger: GAGGCCATGGGGGTGAGCTCAGAGTTCCCACGGATG...GAAGGAGGGTCCTGGACAAGGAAGCCCTAAGCTTCTAAGCTTTAGAGGGAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATTGCTATGTTTCAGGCTaGAGGTGGGGAGCCTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNCYVSG*RWGAFN Trigger: GTTAAAGGCTCCCCACCTTCAGCCTGAAACATAGCA...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCACGCTTCTGTACATATCTTTGCATGTCATTGTGGGAACGGTAGCCAGCCCCTTAACTCAGCTTCATaGACTTTCCCCATGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SHASVHIFACHCGNGSQPLNSAS*TFPMAP Trigger: GGGAGCCATGGGGAAAGTGCATGAAGCTGAGTTAAG...GGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR CAA 90 bp | GAATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTaGCATGTCATTGTGGGAACGGTAGCCAGCCCCTCACTAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EWEETVPNPTLLYIS*HVIVGTVASPSLVQ Trigger: CTGAACTAGTGAGGGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCACGCTTCTGTACATATCTTTGCATGTCATTGTGGGAACGGTAGCCAGCCCCCTTTTCTCTTGTTTTaGAAATGGGCTTGGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: SHASVHIFACHCGNGSQPPFLLF*KWAWTS Trigger: TGAGGTCCAAGCCCATTTTCAAAACAAGAGAAAAGG...GGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR CAA 90 bp | CTCCTTCCACTGGCCCAACAGCTAACTACAACTGATAGGTTTAAATaGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: LLPLAQQLTTTDRFK*KYLEQLHRVLPSTL Trigger: GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCTATCAGTTGTAGTTAGCTGTTGGGCCAGTGGAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCAGGGGTTCTCACCTCCTaGCTCCACTTCCCTCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: NGKKQFQIPRFCTYLCMSGVLTS*LHFPLK Trigger: CTTTAGAGGGAAGTGGAGTCAGGAGGTGAGAACCCC...TGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCCACTTGCAGTTTACTTaGGAACCAGAACCTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLHLQFT*EPEPHL Trigger: GAGATGAGGTTCTGGTTCTCAAGTAAACTGCAAGTG...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR CAA 90 bp | TCAAAGATGTTAAGCAAGGCAGAGACCAACACTAGTGCGCCCTCTTaGGCTAGTTTGAACACGTTTCCAGTCACAATTAACATTCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SKMLSKAETNTSAPS*ASLNTFPVTINIQG Trigger: TCCTTGAATGTTAATTGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTCTGCCTTGCTTAACATCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGTGATCACGAATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACAGGTAATTCCCAAACCTaGAGAAATGTAAACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RQVITNGKKQFQIPRFCTGNSQT*RNVNSQ Trigger: CTGACTGTTTACATTTCTTCAGGTTTGGGAATTACC...TGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR CAA 90 bp | TTAAGCAAGGCAGAGACCAACACTAGTGCGCCCTCTTTGGCTAGTTaGAACACGTTTCCAGTCACAATTAACATTCAAGGAATTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSKAETNTSAPSLAS*NTFPVTINIQGISF Trigger: AAAGGAAATTCCTTGAATGTTAATTGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTCTGCCTTGCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGTGATCACGAATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACAACCCTGGATTATGTATaGCAGGATTTTATAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: RQVITNGKKQFQIPRFCTTLDYV*QDFITQ Trigger: TTGAGTTATAAAATCCTGGCATACATAATCCAGGGT...TGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCACATGAAGATCATAGCTaGTGTTTAATCACGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: NGKKQFQIPRFCTYLCMSHEDHS*CLITEL Trigger: CAGCTCCGTGATTAAACACCAGCTATGATCTTCATG...TGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCACATCCCAGTGCAGTTTaGCCTTTGACAGAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: NGKKQFQIPRFCTYLCMSHPSAV*PLTEIK Trigger: TTTTATTTCTGTCAAAGGCCAAACTGCACTGGGATG...TGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATAGGAGAGGCCCAGCCTaGCATCCCAGTGCAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNRRGPA*HPSAVW Trigger: CCAAACTGCACTGGGATGCAAGGCTGGGCCTCTCCT...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR GCA 72 bp | GCCAGCCCCTCACTAGTTCAGTTGATACCAGCCTTCTaGGCCTCACTGACAACACACACACACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: ASPSLVQLIPAF*ASLTTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTTGTCAGTGAGGCGCAGAAGGCTGGTATCAACTGAACTAGTGAGGGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 72 bp | AGGAGGACATGCTCCCATTGGGGACACTCAGACAGGTaGTCACGAATGGGAAGAAACAGTTCCAAATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RRTCSHWGHSDR*SRMGRNSSKSH Trigger: GTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCTGAGTGTCCCCAATGGGAGCATGTCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR CCA 72 bp | GCTCCCATTGGGGACACTCAGACAGGTGATCACGAATaGGAAGAAACAGTTCCAAATCCCACGCTTCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: APIGDTQTGDHE*EETVPNPTLLY Trigger: GTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCTGAGTGTCCCCAATGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCACGCTTCTGTACATATCTTTGCATGTCATTGTGGGAACGGTAGCCAGCCCCACACACACACACCATaGTTAATACTTCCTCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: SHASVHIFACHCGNGSQPHTHTP*LILPLD Trigger: GTCCAGAGGAAGTATTAACAATGGTGTGTGTGTGTG...GGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 72 bp | CACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATTaGATCATGAATTACAAGCCAGCACCTCTGCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: HPLLQLPLLNCN*IMNYKPAPLPL Trigger: CAAAGGCAGAGGTGCTGGCTTGTAATTCATGATTCAATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATTCCTTTTCTCTTGTTTaGAAAATGGGCTTGGACCTC | + |
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Preference number: 3 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNSFSLV*KMGLDL Trigger: GAGGTCCAAGCCCATTTTCAAAACAAGAGAAAAGGA...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTCCCTCTTTGGCTAGTTaGAACACGTTTCCAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: SQHLCLCRNTPQKARLHFPSLAS*NTFPVT Trigger: TGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGG...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATGTTTTGAAAATGGGCTaGGACCTCATCACTTACCTA | + |
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Preference number: 3 (lower is better) Translates to: TSQHLCLCRNTPQKARLHVLKMG*DLITYL Trigger: TAGGTAAGTGATGAGGTCCAAGCCCATTTTCAAAAC...ATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | AGACAGGTGATCACGAATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACAACACCAGAACGTTCTTaGAAAACAGCAAAGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: RQVITNGKKQFQIPRFCTTPERS*KTAKQA Trigger: AGCCTGCTTTGCTGTTTTCAAAGAACGTTCTGGTGT...TGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCGCACTTGCAGTTTACTaGAGAACCAGAACCTCATCT | + |
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Preference number: 3 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLALAVY*RTRTSS Trigger: AGATGAGGTTCTGGTTCTCAAGTAAACTGCAAGTGC...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 72 bp | CAGAGACCAACACTAGTGCGCCCTCTTTGGCTAGTTTaGACACGTTTCCAGTCACAATTAACATTCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QRPTLVRPLWLV*TRFQSQLTFKE Trigger: TTCCTTGAATGTTAATTGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 72 bp | TTCTGCAGCTCCCCCTTCTTAACTGTAATTGAATCATaGATTACAAGCCAGCACCTCTGCCTTTGCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: FCSSPFLTVIES*ITSQHLCLCRN Trigger: GTTTCTGCAAAGGCAGAGGTGCTGGCTTGTAATTCATGATTCAATTACAGTTAAGAAGGGGGAGCTGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR TCA 72 bp | CTTGAGAACCAGAACCTCATCTCCAACCGAAGATACTaGAGTTGGACTTGGGTCTGGGTAAAATTCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: LENQNLISNRRY*SWTWVWVKFMK Trigger: CTTCATGAATTTTACCCAGACCCAAGTCCAACTTCAGTATCTTCGGTTGGAGATGAGGTTCTGGTTCTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR GCA 72 bp | CTTAACTCAGCTTCATGCACTTTCCCCATGGCTCCCTaGTATCTATGGTTATTCTATTTGTTTACCCACCGT | + |
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Preference number: 3 (lower is better) Translates to: LNSASCTFPMAP*YLWLFYLFTHR Trigger: ACGGTGGGTAAACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTGAGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| 3UTR-3UTR CAA 90 bp | AATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCAAGTGCAGTTTGGCCTTaGACAGAAATAAAAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: NGKKQFQIPRFCTYLCMSSAVWP*TEIKGK Trigger: TTTGCCTTTTATTTCTGTCAAAGGCCAAACTGCACT...TGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTGCGCGGTCCGGCGTTaGGCAGCGACGCTTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSQHLCLCRNTPQKARLHCAVRR*AATLRC Trigger: GCAGCGAAGCGTCGCTGCCCAACGCCGGACCGCGCA...ATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTCGTCCGAGCAGGTGGTaGGGCGGGAGAGGCCGGACA | + |
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Preference number: 4 (lower is better) Translates to: SQHLCLCRNTPQKARLHFRPSRW*GGRGRT Trigger: TGTCCGGCCTCTCCCGCCGCACCACCTGCTCGGACG...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATCGGAGCCGCTGCACCTaGTGGCGAATCGTGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNRSRCT*WRIVWS Trigger: GGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCG...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | CACTTCCCTCTAAAGCTTAGAAGCTTAGGGCTTCCTTGTCCAGGACCCTCCTTCAGCTCCCGGAGCCGCTaGACCTGCTGGCGAATCGTG | + |
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Preference number: 4 (lower is better) Translates to: HFPLKLRSLGLPCPGPSFSSRSR*TCWRIV Trigger: CACGATTCGCCAGCAGGTGCAGCGGCTCCGGGAGCT...GAAGGAGGGTCCTGGACAAGGAAGCCCTAAGCTTCTAAGCTTTAGAGGGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | GAGACCAACACTAGTGCGCCCTCTTTGGCTAGTTTGAACACGTTTCCAGTCACACAGCTCCTCCAACGCTaGCGCCTGCGCCTCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ETNTSAPSLASLNTFPVTQLLQR*RLRLAV Trigger: GACAGCGAGGCGCAGGCGGCAGCGTTGGAGGAGCTG...TGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATCCGCCAGCTCCTCATTaGGCCGCTGCATCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNPPAPH*AAASSA Trigger: AGCGCTGGATGCAGCGGCGCAATGAGGAGCTGGCGG...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | TCCCACGCTTCTGTACATATCTTTGCATGTCATTGTGGGAACGGTAGCCAGCCCGTCCTGACCCGCTCCTaGTCCAGCAGCAGCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SHASVHIFACHCGNGSQPVLTRS*SSSSSP Trigger: TGGCGAGCTGCTGCTGGAGCAGGAGCGGGTCAGGAC...GGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | CACTTCCCTCTAAAGCTTAGAAGCTTAGGGCTTCCTTGTCCAGGACCCTCCTTCAGGCTGGTGCTGAGCTaGGTCCTGACCCGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HFPLKLRSLGLPCPGPSFRLVLS*VLTRSC Trigger: GCAGGAGCGGGTCAGGACGCAGCTCAGCACCAGCCT...GAAGGAGGGTCCTGGACAAGGAAGCCCTAAGCTTCTAAGCTTTAGAGGGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CCA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATAGCAACTCCTCCTGCTaGGCGCGCTCCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNSNSSC*ARSSCS Trigger: GCTGCAGGAGGAGCGCGCCCAGCAGGAGGAGTTGCT...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR TCA 90 bp | ACAAGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATGCTGGCGCCTCCGGTTaGGCTTGGCCAGTTTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: TSQHLCLCRNTPQKARLHAGASG*AWPVCG Trigger: TCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGC...ATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTTGGGCGCGCTCCTCCTaGAGCCGCACCAGGTCGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQHLCLCRNTPQKARLHFWARSS*SRTRSS Trigger: TGACGACCTGGTGCGGCTGCAGGAGGAGCGCGCCCA...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCCCACGTCCGAGCAGGTaGTGCGGCGGGAGAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLPRPSR*CGGRGR Trigger: CCGGCCTCTCCCGCCGCACCACCTGCTCGGACGTGG...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTCATGCACTTTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTTGTGTCAAGCCCCGTCGCTaGCCCCGCCGCTGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLHALSPWLPAIYGYSICVKPRR*PRRCLQ Trigger: CTGCAGGCAGCGGCGGGGCCAGCGACGGGGCTTGAC...ACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTACCGACGCGCTCTCGTaGGTCCGAGCAGACGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQHLCLCRNTPQKARLHFTDALS*VRADDE Trigger: CTCGTCGTCTGCTCGGACCCACGAGAGCGCGTCGGT...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCAACACTAGTGCGCCCTCTTTGGCTAGTTTGAACACGTTTCCAGTCACAGCTCAGCCCAGTATCTaGGTCCTCATCGTTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ETNTSAPSLASLNTFPVTAQPSI*VLIVAR Trigger: CCGGGCAACGATGAGGACTCAGATACTGGGCTGAGC...TGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | TCCCACGCTTCTGTACATATCTTTGCATGTCATTGTGGGAACGGTAGCCAGCCCTGCTGGCGAATCGTGTaGTCCTGCGACAGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHASVHIFACHCGNGSQPCWRIV*SCDSTR Trigger: TCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCA...GGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | ATTGTGGGAACGGTAGCCAGCCCCTCACTAGTTCAGTaGATACCAGCCTTCTGCGCCTCACTGACAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: IVGTVASPSLVQ*IPAFCASLTTH Trigger: GTGTGTTGTCAGTGAGGCGCAGAAGGCTGGTATCAACTGAACTAGTGAGGGGCTGGCTACCGTTCCCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCCGTGGACGAACAAGGTaGCGACGGCTGCTGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLRGRTR*RRLLLA Trigger: CGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACG...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCAACACTAGTGCGCCCTCTTTGGCTAGTTTGAACACGTTTCCAGTCACATATCCTGCACGTAGTTaGCTCCGTGCCTCCGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ETNTSAPSLASLNTFPVTYPARS*LRASAC Trigger: GCATGCGGAGGCACGGAGTCAACTACGTGCAGGATA...TGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCATGCACTTTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTTGTCGTACCACCCGCCGCTaGTTCTCCTGGGTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLHALSPWLPAIYGYSICRTTRR*FSWVKA Trigger: GGCCTTGACCCAGGAGAAGCAGCGGCGGGTGGTACG...ACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATCGAATCGTGTGGTCCTaGGACAGCACCAGATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSQHLCLCRNTPQKARLHRIVWS*DSTRCT Trigger: GGTGCATCTGGTGCTGTCGCAGGACCACACGATTCG...ATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCGGTCGTCACAGCGCCTaGCCAGCTCCTCCAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLGRHSA*PAPPTL Trigger: CAGCGTTGGAGGAGCTGGCCAGGCGCTGTGACGACC...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCATGCACTTTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTTGTAATCCAAGTCCGCCTTaGCGGCCTCCAGGTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLHALSPWLPAIYGYSICNPSPP*RPPGPC Trigger: GCACGGACCTGGAGGCCGTCAAGGCGGACTTGGATT...ACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCATGCACTTTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTTGTAGCAGGACGAGGCGGTaGACGACGACGTGGACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLHALSPWLPAIYGYSICSRTRR*TTTWTN Trigger: GTTCGTCCACGTCGTCGTCCACCGCCTCGTCCTGCT...ACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCAGCCGCTGCACCTGCTaGCGAATCGTGTGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLSRCTC*RIVWSC Trigger: GCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCT...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTCGCTGCATCCAGCGCTaGTTCAGTTCCTCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLCLCRNTPQKARLHFRCIQR*FSSSWI Trigger: GATCCAGGAGGAACTGAACCAGCGCTGGATGCAGCG...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCATGCACTTTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTTGTCGCGAGAGGGTCCGCTaGAACCCAGAGCCCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLHALSPWLPAIYGYSICRERVR*NPEPHH Trigger: ATGATGGGGCTCTGGGTTCCAGCGGACCCTCTCGCG...ACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAAGCAGGCTGCACCCCCTTCTGCAGCTCCCCCTTCTTAACTGTAATACCGAGTCTGAGTCTTaGCTATGCATGGAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQQSRLHPLLQLPLLNCNTESES*LCMELS Trigger: GCTGAGCTCCATGCATAGCCAAGACTCAGACTCGGT...ATTACAGTTAAGAAGGGGGAGCTGCAGAAGGGGGTGCAGCCTGCTTTGCTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTCCCAGAGCCCCATCATaGACCACCGTCTGCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQHLCLCRNTPQKARLHFPRAPS*TTVCSK Trigger: TTTTGAGCAGACGGTGGTGCATGATGGGGCTCTGGG...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCATGACGACGGCTGCTGCTaGCGCCTCCGGTTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MGRNSSKSHASVHIFACHDDGCC*RLRLSL Trigger: CAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTC...ATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCGCCACTTCTCCACAATaGAATAGCACTGCGGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLATSPQ*NSTAGA Trigger: GGCCCCCGCAGTGCTATTGCATTGTGGAGAAGTGGC...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCTCTTGTTGGGCAGGATaGGCTCAAAGCCGCGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLSCWAG*AQSRAT Trigger: AGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGA...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCATGCAGCGACGCTTCGCTaGGCACCAGCACGAAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: MGRNSSKSHASVHIFACHAATLR*APARSV Trigger: TACGCTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGC...ATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCATCTCCGTGCCTCCGCATaGGGTCTAGGTGCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGRNSSKSHASVHIFACHLRASA*GLGAPW Trigger: CCAAGGTGCACCTAGACCGCATGCGGAGGCACGGAG...ATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCCTCTAAAGCTTAGAAGCTTAGGGCTTCCTTGTCCAGGACCCTCCTTCTCATGCACCACCGTCTaGTCAAAAGTGTGCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HFPLKLRSLGLPCPGPSFSCTTV*SKVCKL Trigger: GAGTTTGCACACTTTTGAGCAGACGGTGGTGCATGA...GAAGGAGGGTCCTGGACAAGGAAGCCCTAAGCTTCTAAGCTTTAGAGGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACCTCTGCCTTTGCAGAAACACACCCCAAAAAGCCAGACTACATTTTACCAGCTTCTCCTCCTaGCAGATCCACACCGATATC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLCLCRNTPQKARLHFTSFSS*QIHTDI Trigger: GATATCGGTGTGGATCTGCCAGGAGGAGAAGCTGGT...AAAATGTAGTCTGGCTTTTTGGGGTGTGTTTCTGCAAAGGCAGAGGTGCTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAACCAGGGGCAACTTTTAAGTCTTAACTCAGCTTCATGCACTTTCCCCGGTCTAGGTGCACCTTaGCTTCGTAGCGGTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: MANQGQLLSLNSASCTFPGLGAP*LRSGLS Trigger: AGATAGACCGCTACGAAGCCAAGGTGCACCTAGACC...GGGGAAAGTGCATGAAGCTGAGTTAAGACTTAAAAGTTGCCCCTGGTTGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | TTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTaGTTTACCCACCGTGGCCTATCAGATTCCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPMAPCYLWLFY*FTHRGLSDSSP Trigger: GGGGGAGGAATCTGATAGGCCACGGTGGGTAAACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCCAACCAGGGGCAACTTTTAAGTCTTAACTCAGCTTCATGCACTTTCCCCTCTGAGTCTTGGCTATaGATGGAGCTCAGCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MANQGQLLSLNSASCTFPSESWL*MELSPV Trigger: TACTGGGCTGAGCTCCATGCATAGCCAAGACTCAGA...GGGGAAAGTGCATGAAGCTGAGTTAAGACTTAAAAGTTGCCCCTGGTTGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAACCAGGGGCAACTTTTAAGTCTTAACTCAGCTTCATGCACTTTCCCCAGTCTTGGCTATGCATaGAGCTCAGCCCAGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MANQGQLLSLNSASCTFPSLGYA*SSAQYL Trigger: CAGATACTGGGCTGAGCTCCATGCATAGCCAAGACT...GGGGAAAGTGCATGAAGCTGAGTTAAGACTTAAAAGTTGCCCCTGGTTGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | GAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTaGCATGTCATTGTGGGAACGGTAGCCAGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETVPNPTLLYIS*HVIVGTVASPS Trigger: TGAGGGGCTGGCTACCGTTCCCACAATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCATTGCGACAGCACCAGATaGACCAGCGTCTCCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: MGRNSSKSHASVHIFACHCDSTR*TSVSIR Trigger: ACGTATGGAGACGCTGGTGCATCTGGTGCTGTCGCA...ATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCATAGATCCGCGTCTTGTTaGGCAGGATGCGCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MGRNSSKSHASVHIFACHRSASC*AGCAQS Trigger: GCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCT...ATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS-3UTR GCA 90 bp | AATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCAGTCTACCCACATTTCTaGACAGGTCTGAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGKKQFQIPRFCTYLCMSVYPHF*TGLRLR Trigger: CCTCAGCCTCAGACCTGTGCAGAAATGTGGGTAGAC...TGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | GCAGAGACCAACACTAGTGCGCCCTCTTTGGCTAGTTaGAACACGTTTCCAGTCACAATTAACATTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AETNTSAPSLAS*NTFPVTINIQG Trigger: TCCTTGAATGTTAATTGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | TTAAGCAAGGCAGAGACCAACACTAGTGCGCCCTCTTaGGCTAGTTTGAACACGTTTCCAGTCACAATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKAETNTSAPS*ASLNTFPVTIN Trigger: GTTAATTGTGACTGGAAACGTGTTCAAACTAGCCAAAGAGGGCGCACTAGTGTTGGTCTCTGCCTTGCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | GAACCTCATCTCCAACCGAAGATACTGAAGTTGGACTaGGGTCTGGGTAAAATTCATGAAGATCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EPHLQPKILKLD*GLGKIHEDHSW Trigger: CCAGCTATGATCTTCATGAATTTTACCCAGACCCAAGTCCAACTTCAGTATCTTCGGTTGGAGATGAGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | TTTAACACAATGTATTTAGTAAGGAGAGGCCCAGCCTaGCATCCCAGTGCAGTTTGGCCTTTGACAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: FNTMYLVRRGPA*HPSAVWPLTEI Trigger: TATTTCTGTCAAAGGCCAAACTGCACTGGGATGCAAGGCTGGGCCTCTCCTTACTAAATACATTGTGTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| 3UTR CAA 72 bp | GAACCAGAACCTCATCTCCAACCGAAGATACTGAAGTaGGACTTGGGTCTGGGTAAAATTCATGAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPEPHLQPKILK*DLGLGKIHEDH Trigger: ATGATCTTCATGAATTTTACCCAGACCCAAGTCCAACTTCAGTATCTTCGGTTGGAGATGAGGTTCTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS GCA 90 bp | CAGCCGCACCAGGTCGTCACAGCGCCTGGCCAGCTCCTCCAACGCTaGCGCCTGCGCCTCGCTGTCCAGGGGTGCCGCCGGTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QPHQVVTAPGQLLQR*RLRLAVQGCRRFCP Trigger: GGGACAGAACCGGCGGCACCCCTGGACAGCGAGGCGCAGGCGGCAGCGTTGGAGGAGCTGGCCAGGCGCTGTGACGACCTGGTGCGGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS CCA 90 bp | GGCAGCTCCAACTGGCCCGAAGGGTCTTCCGTCAAGCCCCGTCGCTaGCCCCGCCGCTGCCTGCAGCGCCGCCGGCAGCCGTCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSNWPEGSSVKPRR*PRRCLQRRRQPSSK Trigger: TTTGGAGGACGGCTGCCGGCGGCGCTGCAGGCAGCGGCGGGGCCAGCGACGGGGCTTGACGGAAGACCCTTCGGGCCAGTTGGAGCTGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS GCA 90 bp | GCGCCTCGGCGCTGCGCGGTCCGGCGTTGGGCAGCGACGCTTCGCTaGGCACCAGCACGAAGCGTACATTCTCCTGCTCGTCGCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: APRRCAVRRWAATLR*APARSVHSPARRPK Trigger: CTTGGGGCGACGAGCAGGAGAATGTACGCTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGCCCAACGCCGGACCGCGCAGCGCCGAGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS GCA 90 bp | ACCAGGTCGTCACAGCGCCTGGCCAGCTCCTCCAACGCTGCCGCCTaGGCCTCGCTGTCCAGGGGTGCCGCCGGTTCTGTCCCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRSSQRLASSSNAAA*ASLSRGAAGSVPFS Trigger: GGAGAAGGGGACAGAACCGGCGGCACCCCTGGACAGCGAGGCGCAGGCGGCAGCGTTGGAGGAGCTGGCCAGGCGCTGTGACGACCTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS CCA 90 bp | GCCGGCAGCCGTCCTCCAAAAGCACCCGCACCACGTCCGAGCAGGTaGTGCGGCGGGAGAGGCCGGACACCAGCTTCTCCTCCTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGSRPPKAPAPRPSR*CGGRGRTPASPPGR Trigger: TCTGCCAGGAGGAGAAGCTGGTGTCCGGCCTCTCCCGCCGCACCACCTGCTCGGACGTGGTGCGGGTGCTTTTGGAGGACGGCTGCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS GCA 90 bp | GGCAGCCGTCCTCCAAAAGCACCCGCACCACGTCCGAGCAGGTGGTaGGGCGGGAGAGGCCGGACACCAGCTTCTCCTCCTGGCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRPPKAPAPRPSRW*GGRGRTPASPPGRS Trigger: GGATCTGCCAGGAGGAGAAGCTGGTGTCCGGCCTCTCCCGCCGCACCACCTGCTCGGACGTGGTGCGGGTGCTTTTGGAGGACGGCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS CCA 90 bp | ACGCGCTCTCGTGGGTCCGAGCAGACGACGAGCAGGACGAGGCGGTaGACGACGACGTGGACGAACAAGGTGACGACGGCTGCTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRSRGSEQTTSRTRR*TTTWTNKVTTAAAG Trigger: GCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTCGTCCTGCTCGTCGTCTGCTCGGACCCACGAGAGCGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS GCA 90 bp | GACGAGGCGGTGGACGACGACGTGGACGAACAAGGTGACGACGGCTaGTGCTGGCGCCTCCGGTTGAGCTTGGCCAGTTTGCGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DEAVDDDVDEQGDDG*CWRLRLSLASLRKA Trigger: GGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTCGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS TCA 90 bp | ACGTGGACGAACAAGGTGACGACGGCTGCTGCTGGCGCCTCCGGTTaGGCTTGGCCAGTTTGCGGAAGGCCTTGCGTACCACCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TWTNKVTTAAAGASG*AWPVCGRPCVPPAA Trigger: AGCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
||
| CDS TCA 90 bp | CGACGAGCAGGACGAGGCGGTGGACGACGACGTGGACGAACAAGGTaGCGACGGCTGCTGCTGGCGCCTCCGGTTGAGCTTGGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRAGRGGGRRRGRTR*RRLLLAPPVELGQF Trigger: AAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTCGTCCTGCTCGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 90 bp | GAGGCGGTGGACGACGACGTGGACGAACAAGGTGACGACGGCTGCTaGTGGCGCCTCCGGTTGAGCTTGGCCAGTTTGCGGAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EAVDDDVDEQGDDGC*WRLRLSLASLRKAL Trigger: CAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | GCGGTGGACGACGACGTGGACGAACAAGGTGACGACGGCTGCTGCTaGCGCCTCCGGTTGAGCTTGGCCAGTTTGCGGAAGGCCTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: AVDDDVDEQGDDGCC*RLRLSLASLRKALR Trigger: ACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 90 bp | GGCAGCGACGCTTCGCTGCGCACCAGCACGAAGCGTACATTCTCCTaGTCGTCGCCCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSDASLRTSTKRTFS*SSPQAVQRRKIRVL Trigger: CAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGGGCGACGAGCAGGAGAATGTACGCTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | ACCAGATGCACCAGCGTCTCCATACGTTCTACCGACGCGCTCTCGTaGGTCCGAGCAGACGACGAGCAGGACGAGGCGGTGGACGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRCTSVSIRSTDALS*VRADDEQDEAVDDD Trigger: GTCGTCGTCCACCGCCTCGTCCTGCTCGTCGTCTGCTCGGACCCACGAGAGCGCGTCGGTAGAACGTATGGAGACGCTGGTGCATCTGGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | TCGCGGTCCAGCTCCCGGAGCCGCTGCACCTGCTGGCGAATCGTGTaGTCCTGCGACAGCACCAGATGCACCAGCGTCTCCATACGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSRSRCTCWRIV*SCDSTRCTSVSIRS Trigger: AGAACGTATGGAGACGCTGGTGCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCGGGAGCTGGACCGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | AGCTCCTCATTGCGCCGCTGCATCCAGCGCTGGTTCAGTTCCTCCTaGATCTCGGCGGACAGGCGCTCTAGCAACTCCTCCTGCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLRRCIQRWFSSS*ISADRRSSNSSCWA Trigger: CGCCCAGCAGGAGGAGTTGCTAGAGCGCCTGTCCGCCGAGATCCAGGAGGAACTGAACCAGCGCTGGATGCAGCGGCGCAATGAGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 90 bp | CGCTGCACCTGCTGGCGAATCGTGTGGTCCTGCGACAGCACCAGATaGACCAGCGTCTCCATACGTTCTACCGACGCGCTCTCGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCTCWRIVWSCDSTR*TSVSIRSTDALSWV Trigger: GACCCACGAGAGCGCGTCGGTAGAACGTATGGAGACGCTGGTGCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 90 bp | TCCAGCTCCCGGAGCCGCTGCACCTGCTGGCGAATCGTGTGGTCCTaGGACAGCACCAGATGCACCAGCGTCTCCATACGTTCTACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSRCTCWRIVWS*DSTRCTSVSIRSTD Trigger: GTCGGTAGAACGTATGGAGACGCTGGTGCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCGGGAGCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 90 bp | TCTTGTTGGGCAGGATGCGCTCAAAGCCGCGCCACTTCTCCACAATaGAATAGCACTGCGGGGGCCCACATAGCATGCCCGGGGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SCWAGCAQSRATSPQ*NSTAGAHIACPGAS Trigger: CGATGCCCCCGGGCATGCTATGTGGGCCCCCGCAGTGCTATTGCATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS TCA 90 bp | CCAGGTCGATGCCGGCCCCCACTAGATAGGTATCCTGCACGTAGTTaGCTCCGTGCCTCCGCATGCGGTCTAGGTGCACCTTGGCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGRCRPPLDRYPARS*LRASACGLGAPWLR Trigger: ACGAAGCCAAGGTGCACCTAGACCGCATGCGGAGGCACGGAGTCAACTACGTGCAGGATACCTATCTAGTGGGGGCCGGCATCGACCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | GCTCGTCGCCCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTTGTTaGGCAGGATGCGCTCAAAGCCGCGCCACTTCTCCACAATGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ARRPKQSRGARSASC*AGCAQSRATSPQCN Trigger: ATTGCATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGGGCGACGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 90 bp | CCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTTGTTGGGCAGGATaGGCTCAAAGCCGCGCCACTTCTCCACAATGCAATAGCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PKQSRGARSASCWAG*AQSRATSPQCNSTA Trigger: CGCAGTGCTATTGCATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | ACATTTCTGCACAGGTCTGAGGCTGAGGTTCGCGAGAGGGTCCGCTaGAACCCAGAGCCCCATCATGCACCACCGTCTGCTCAAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TFLHRSEAEVRERVR*NPEPHHAPPSAQKC Trigger: ACACTTTTGAGCAGACGGTGGTGCATGATGGGGCTCTGGGTTCCAGCGGACCCTCTCGCGAACCTCAGCCTCAGACCTGTGCAGAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 90 bp | GGGATTCACACACAGGGGGTACCGAGTCTGAGTCTTGGCTATGCATaGAGCTCAGCCCAGTATCTGAGTCCTCATCGTTGCCCGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GIHTQGVPSLSLGYA*SSAQYLSPHRCPGN Trigger: GTTGCCCGGGCAACGATGAGGACTCAGATACTGGGCTGAGCTCCATGCATAGCCAAGACTCAGACTCGGTACCCCCTGTGTGTGAATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTAAATTGAAATACCTGGAACAATTACACCGAGTGCTCCCCAGCACTCTCGCCGCCAGCTCCTCATaGCGCCGCTGCATCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RFKLKYLEQLHRVLPSTLAASSS*RRCIQR Trigger: GCGCTGGATGCAGCGGCGCAATGAGGAGCTGGCGGC...GAGAGTGCTGGGGAGCACTCGGTGTAATTGTTCCAGGTATTTCAATTTAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CAA 90 bp | CACTTCCCTCTAAAGCTTAGAAGCTTAGGGCTTCCTTGTCCAGGACCCTCCTTCTTGAGCTTGGCCAGTTaGCGGAAGGCCTTGCGTACC | + |
|
Preference number: 5 (lower is better) Translates to: HFPLKLRSLGLPCPGPSFLSLAS*RKALRT Trigger: GGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAA...GAAGGAGGGTCCTGGACAAGGAAGCCCTAAGCTTCTAAGCTTTAGAGGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CAA 90 bp | AGACAGGTGATCACGAATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACACGCCTCCGGTTGAGCTaGGCCAGTTTGCGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RQVITNGKKQFQIPRFCTRLRLS*ASLRKA Trigger: GGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCG...TGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCATTCGTGATCACCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CAA 90 bp | CAGCTTCATGCACTTTCCCCATGGCTCCCTGCTATCTATGGTTATTCTATTTGTCGCAAGATCCGCGTCTaGTTGGGCAGGATGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLHALSPWLPAIYGYSICRKIRV*LGRMRS Trigger: TGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCG...ACAAATAGAATAACCATAGATAGCAGGGAGCCATGGGGAAAGTGCATGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS-3UTR CAA 90 bp | ATGGGAAGAAACAGTTCCAAATCCCACGCTTCTGTACATATCTTTGCATGTCATTGCTGGCGCCTCCGGTaGAGCTTGGCCAGTTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: MGRNSSKSHASVHIFACHCWRLR*SLASLR Trigger: CCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCA...ATGACATGCAAAGATATGTACAGAAGCGTGGGATTTGGAACTGTTTCTTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | AACTGGCCCGAAGGGTCTTCCGTCAAGCCCCGTCGCTaGCCCCGCCGCTGCCTGCAGCGCCGCCGGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: NWPEGSSVKPRR*PRRCLQRRRQP Trigger: CGGCTGCCGGCGGCGCTGCAGGCAGCGGCGGGGCCAGCGACGGGGCTTGACGGAAGACCCTTCGGGCCAGTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | CAGGTCGTCACAGCGCCTGGCCAGCTCCTCCAACGCTaGCGCCTGCGCCTCGCTGTCCAGGGGTGCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVVTAPGQLLQR*RLRLAVQGCRR Trigger: CCGGCGGCACCCCTGGACAGCGAGGCGCAGGCGGCAGCGTTGGAGGAGCTGGCCAGGCGCTGTGACGACCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | GCACTACCCGCGCCTCGGCGCTGCGCGGTCCGGCGTTaGGCAGCGACGCTTCGCTGCGCACCAGCACGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALPAPRRCAVRR*AATLRCAPARS Trigger: GCTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGCCCAACGCCGGACCGCGCAGCGCCGAGGCGCGGGTAGTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 72 bp | AGCACTACCCGCGCCTCGGCGCTGCGCGGTCCGGCGTaGGGCAGCGACGCTTCGCTGCGCACCAGCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STTRASALRGPA*GSDASLRTSTK Trigger: CTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGCCCAACGCCGGACCGCGCAGCGCCGAGGCGCGGGTAGTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | TCGCGGCTGAGCACTACCCGCGCCTCGGCGCTGCGCGGTCCGGCGTaGGGCAGCGACGCTTCGCTGCGCACCAGCACGAAGCGTACATTC | + |
|
Preference number: 6 (lower is better) Translates to: SRLSTTRASALRGPA*GSDASLRTSTKRTF Trigger: GAATGTACGCTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGCCCAACGCCGGACCGCGCAGCGCCGAGGCGCGGGTAGTGCTCAGCCGCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | CTCCAACGCTGCCGCCTGCGCCTCGCTGTCCAGGGGTaGCGCCGGTTCTGTCCCCTTCTCCTCCAGTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LQRCRLRLAVQG*RRFCPLLLQCR Trigger: GCGACACTGGAGGAGAAGGGGACAGAACCGGCGGCACCCCTGGACAGCGAGGCGCAGGCGGCAGCGTTGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | GGTGACGACGGCTGCTGCTGGCGCCTCCGGTTGAGCTTGGCCAGTTaGCGGAAGGCCTTGCGTACCACCCGCCGCTGCTTCTCCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDDGCCWRLRLSLAS*RKALRTTRRCFSWV Trigger: GACCCAGGAGAAGCAGCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | CGCTGCGCGGTCCGGCGTTGGGCAGCGACGCTTCGCTaGGCACCAGCACGAAGCGTACATTCTCCTGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RCAVRRWAATLR*APARSVHSPAR Trigger: ACGAGCAGGAGAATGTACGCTTCGTGCTGGTGCGCAGCGAAGCGTCGCTGCCCAACGCCGGACCGCGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | CGTCCTCCAAAAGCACCCGCACCACGTCCGAGCAGGTaGTGCGGCGGGAGAGGCCGGACACCAGCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPPKAPAPRPSR*CGGRGRTPASP Trigger: AGGAGAAGCTGGTGTCCGGCCTCTCCCGCCGCACCACCTGCTCGGACGTGGTGCGGGTGCTTTTGGAGGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | CAGACGACGAGCAGGACGAGGCGGTGGACGACGACGTaGACGAACAAGGTGACGACGGCTGCTGCTGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: QTTSRTRRWTTT*TNKVTTAAAGA Trigger: GGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTCGTCCTGCTCGTCGTCTG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | GCCGCCAGCTCCTCATTGCGCCGCTGCATCCAGCGCTaGTTCAGTTCCTCCTGGATCTCGGCGGACAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AASSSLRRCIQR*FSSSWISADRR Trigger: GCGCCTGTCCGCCGAGATCCAGGAGGAACTGAACCAGCGCTGGATGCAGCGGCGCAATGAGGAGCTGGCGGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 72 bp | GGCTGCTGCTGGCGCCTCCGGTTGAGCTTGGCCAGTTaGCGGAAGGCCTTGCGTACCACCCGCCGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCCWRLRLSLAS*RKALRTTRRCF Trigger: GAAGCAGCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 72 bp | GGTGACGACGGCTGCTGCTGGCGCCTCCGGTTGAGCTaGGCCAGTTTGCGGAAGGCCTTGCGTACCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GDDGCCWRLRLS*ASLRKALRTTR Trigger: GCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | TGCTGCTGGCGCCTCCGGTTGAGCTTGGCCAGTTTGCGGAAGGCCTaGCGTACCACCCGCCGCTGCTTCTCCTGGGTCAAGGCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCWRLRLSLASLRKA*RTTRRCFSWVKARL Trigger: CAGCCTGGCCTTGACCCAGGAGAAGCAGCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | GACGTGGACGAACAAGGTGACGACGGCTGCTGCTGGCGCCTCCGGTaGAGCTTGGCCAGTTTGCGGAAGGCCTTGCGTACCACCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: DVDEQGDDGCCWRLR*SLASLRKALRTTRR Trigger: GCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS TCA 72 bp | GGACGAGGCGGTGGACGACGACGTGGACGAACAAGGTaGCGACGGCTGCTGCTGGCGCCTCCGGTTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRGGGRRRGRTR*RRLLLAPPVEL Trigger: AAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTCGTCC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | CGTGGGTCCGAGCAGACGACGAGCAGGACGAGGCGGTaGACGACGACGTGGACGAACAAGGTGACGACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGSEQTTSRTRR*TTTWTNKVTTA Trigger: AGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCACCGCCTCGTCCTGCTCGTCGTCTGCTCGGACCCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | AGCTCCCGGAGCCGCTGCACCTGCTGGCGAATCGTGTaGTCCTGCGACAGCACCAGATGCACCAGCGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSRCTCWRIV*SCDSTRCTSVS Trigger: GGAGACGCTGGTGCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCGGGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | ATCTCGCGGTCCAGCTCCCGGAGCCGCTGCACCTGCTaGCGAATCGTGTGGTCCTGCGACAGCACCAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ISRSSSRSRCTC*RIVWSCDSTRC Trigger: GCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCGGGAGCTGGACCGCGAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | GACGAACAAGGTGACGACGGCTGCTGCTGGCGCCTCCGGTTGAGCTaGGCCAGTTTGCGGAAGGCCTTGCGTACCACCCGCCGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DEQGDDGCCWRLRLS*ASLRKALRTTRRCF Trigger: GAAGCAGCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | GACGACGACGTGGACGAACAAGGTGACGACGGCTGCTaGTGGCGCCTCCGGTTGAGCTTGGCCAGTTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: DDDVDEQGDDGC*WRLRLSLASLR Trigger: CCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | TCTATCTCGCGGTCCAGCTCCCGGAGCCGCTGCACCTaGTGGCGAATCGTGTGGTCCTGCGACAGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SISRSSSRSRCT*WRIVWSCDSTR Trigger: TCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCGGGAGCTGGACCGCGAGATAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | ACCAGCGTCTCCATACGTTCTACCGACGCGCTCTCGTaGGTCCGAGCAGACGACGAGCAGGACGAGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSVSIRSTDALS*VRADDEQDEAV Trigger: CACCGCCTCGTCCTGCTCGTCGTCTGCTCGGACCCACGAGAGCGCGTCGGTAGAACGTATGGAGACGCTGGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 72 bp | CGCCTCCGGTTGAGCTTGGCCAGTTTGCGGAAGGCCTaGCGTACCACCCGCCGCTGCTTCTCCTGGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRLSLASLRKA*RTTRRCFSWVK Trigger: CTTGACCCAGGAGAAGCAGCGGCGGGTGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | CCACCATCGGGCTCTAGGGACTCCTCTCGAGCCGCCAGCTCCTCATaGCGCCGCTGCATCCAGCGCTGGTTCAGTTCCTCCTGGATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PPSGSRDSSRAASSS*RRCIQRWFSSSWIS Trigger: CGAGATCCAGGAGGAACTGAACCAGCGCTGGATGCAGCGGCGCAATGAGGAGCTGGCGGCTCGAGAGGAGTCCCTAGAGCCCGATGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | CCACAATGCAATAGCACTGCGGGGGCCCACATAGCATaGCCGGGGGCATCGCGTCGTCGTCATCCTCGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PQCNSTAGAHIA*PGASRRRHPRR Trigger: ACGACGAGGATGACGACGACGCGATGCCCCCGGGCATGCTATGTGGGCCCCCGCAGTGCTATTGCATTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | GTGGACGACGACGTGGACGAACAAGGTGACGACGGCTaGTGCTGGCGCCTCCGGTTGAGCTTGGCCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VDDDVDEQGDDG*CWRLRLSLASL Trigger: CAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTCGTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | CGGAGCCGCTGCACCTGCTGGCGAATCGTGTGGTCCTaGGACAGCACCAGATGCACCAGCGTCTCCATACGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRCTCWRIVWS*DSTRCTSVSIR Trigger: ACGTATGGAGACGCTGGTGCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCAGGTGCAGCGGCTCCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | GCTCTAGGGACTCCTCTCGAGCCGCCAGCTCCTCATTaGGCCGCTGCATCCAGCGCTGGTTCAGTTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALGTPLEPPAPH*AAASSAGSVPP Trigger: AGGAGGAACTGAACCAGCGCTGGATGCAGCGGCGCAATGAGGAGCTGGCGGCTCGAGAGGAGTCCCTAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | GACGACGTGGACGAACAAGGTGACGACGGCTGCTGCTaGCGCCTCCGGTTGAGCTTGGCCAGTTTGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: DDVDEQGDDGCC*RLRLSLASLRK Trigger: CTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTTCGTCCACGTCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | TTGCGCCGCTGCATCCAGCGCTGGTTCAGTTCCTCCTaGATCTCGGCGGACAGGCGCTCTAGCAACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRRCIQRWFSSS*ISADRRSSNSS Trigger: GGAGGAGTTGCTAGAGCGCCTGTCCGCCGAGATCCAGGAGGAACTGAACCAGCGCTGGATGCAGCGGCGCAA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | CACAGGTCTGAGGCTGAGGTTCGCGAGAGGGTCCGCTaGAACCCAGAGCCCCATCATGCACCACCGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: HRSEAEVRERVR*NPEPHHAPPSA Trigger: AGCAGACGGTGGTGCATGATGGGGCTCTGGGTTCCAGCGGACCCTCTCGCGAACCTCAGCCTCAGACCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 72 bp | TCGCCCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTaGTTGGGCAGGATGCGCTCAAAGCCGCGCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: SPQAVQRRKIRV*LGRMRSKPRHF Trigger: GAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | TCCTGCTCGTCGCCCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTaGTTGGGCAGGATGCGCTCAAAGCCGCGCCACTTCTCCACAATG | + |
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Preference number: 6 (lower is better) Translates to: SCSSPQAVQRRKIRV*LGRMRSKPRHFSTM Trigger: CATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGGGCGACGAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS TCA 72 bp | AACAAGGTGACGACGGCTGCTGCTGGCGCCTCCGGTTaGGCTTGGCCAGTTTGCGGAAGGCCTTGCGTACCA | + |
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Preference number: 6 (lower is better) Translates to: NKVTTAAAGASG*AWPVCGRPCVP Trigger: TGGTACGCAAGGCCTTCCGCAAACTGGCCAAGCTCAACCGGAGGCGCCAGCAGCAGCCGTCGTCACCTTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | GCAGGATGCGCTCAAAGCCGCGCCACTTCTCCACAATaGAATAGCACTGCGGGGGCCCACATAGCATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: AGCAQSRATSPQ*NSTAGAHIACP Trigger: CGGGCATGCTATGTGGGCCCCCGCAGTGCTATTGCATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | GCTTCGCTGCGCACCAGCACGAAGCGTACATTCTCCTaGTCGTCGCCCCAAGCAGTCCAGAGGCGCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: ASLRTSTKRTFS*SSPQAVQRRKI Trigger: GATCTTGCGCCTCTGGACTGCTTGGGGCGACGAGCAGGAGAATGTACGCTTCGTGCTGGTGCGCAGCGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | CCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTTGTTaGGCAGGATGCGCTCAAAGCCGCGCCACTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PKQSRGARSASC*AGCAQSRATSP Trigger: TGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 72 bp | TGCATGGAGCTCAGCCCAGTATCTGAGTCCTCATCGTaGCCCGGGCAACTCTTAGCCAGTCCCCGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CMELSPVSESSS*PGQLLASPRAW Trigger: CCAGGCCCGGGGACTGGCTAAGAGTTGCCCGGGCAACGATGAGGACTCAGATACTGGGCTGAGCTCCATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | TGCTCGTCGCCCCAAGCAGTCCAGAGGCGCAAGATCCGCGTCTTGTaGGGCAGGATGCGCTCAAAGCCGCGCCACTTCTCCACAATGCAA | + |
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Preference number: 6 (lower is better) Translates to: CSSPQAVQRRKIRVL*GRMRSKPRHFSTMQ Trigger: TTGCATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGACTGCTTGGGGCGACGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS TCA 72 bp | TGCCGGCCCCCACTAGATAGGTATCCTGCACGTAGTTaGCTCCGTGCCTCCGCATGCGGTCTAGGTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: CRPPLDRYPARS*LRASACGLGAP Trigger: AGGTGCACCTAGACCGCATGCGGAGGCACGGAGTCAACTACGTGCAGGATACCTATCTAGTGGGGGCCGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | TGCTGGCGAATCGTGTGGTCCTGCGACAGCACCAGATaGACCAGCGTCTCCATACGTTCTACCGACGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: CWRIVWSCDSTR*TSVSIRSTDAL Trigger: GAGCGCGTCGGTAGAACGTATGGAGACGCTGGTGCATCTGGTGCTGTCGCAGGACCACACGATTCGCCAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | CCGGCTCCCCTTCAGGAGTTTGTCCGTCCAGGTCGATaGCGGCCCCCACTAGATAGGTATCCTGCACGTAGT | + |
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Preference number: 6 (lower is better) Translates to: PAPLQEFVRPGR*RPPLDRYPARS Trigger: ACTACGTGCAGGATACCTATCTAGTGGGGGCCGGCATCGACCTGGACGGACAAACTCCTGAAGGGGAGCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CAA 90 bp | TCTTGGCTATGCATGGAGCTCAGCCCAGTATCTGAGTCCTCATCGTaGCCCGGGCAACTCTTAGCCAGTCCCCGGGCCTGGTCTACCCAC | + |
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Preference number: 6 (lower is better) Translates to: SWLCMELSPVSESSS*PGQLLASPRAWSTH Trigger: GTGGGTAGACCAGGCCCGGGGACTGGCTAAGAGTTGCCCGGGCAACGATGAGGACTCAGATACTGGGCTGAGCTCCATGCATAGCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | TCGCGAGAGGGTCCGCTGGAACCCAGAGCCCCATCATaGACCACCGTCTGCTCAAAAGTGTGCAAACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SREGPLEPRAPS*TTVCSKVCKLW Trigger: CCAGAGTTTGCACACTTTTGAGCAGACGGTGGTGCATGATGGGGCTCTGGGTTCCAGCGGACCCTCTCGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS GCA 72 bp | TCCAGAGGCGCAAGATCCGCGTCTTGTTGGGCAGGATaGGCTCAAAGCCGCGCCACTTCTCCACAATGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SRGARSASCWAG*AQSRATSPQCN Trigger: ATTGCATTGTGGAGAAGTGGCGCGGCTTTGAGCGCATCCTGCCCAACAAGACGCGGATCTTGCGCCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS TCA 72 bp | GTCTGCTCAAAAGTGTGCAAACTCTGGAGAAGGCCCTaGAGCTCGCGCTCCTTAATGTCCCTCTGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VCSKVCKLWRRP*SSRSLMSLCCW Trigger: CCAGCAGCAGAGGGACATTAAGGAGCGCGAGCTTCAGGGCCTTCTCCAGAGTTTGCACACTTTTGAGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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| CDS CCA 72 bp | ACACAGGGGGTACCGAGTCTGAGTCTTGGCTATGCATaGAGCTCAGCCCAGTATCTGAGTCCTCATCGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TQGVPSLSLGYA*SSAQYLSPHRC Trigger: GCAACGATGAGGACTCAGATACTGGGCTGAGCTCCATGCATAGCCAAGACTCAGACTCGGTACCCCCTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182858.2 |
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