Pregenerated sensors for RASSF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010067Ensembl transcript IDs: ENSMUST00000010211.7, ENSMUST00000093786.9, ENSMUST00000122225.8, ENSMUST00000156198.8
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGGATGCAAAGCCCCGCCCCACTATATCCACAGGTAGACGGCTaGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: RGMQSPAPLYPQVDG*LFPCSLGSSRSAEE Trigger: CTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGGGGCGGGGCTTTGCATCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | TCCGCCCCGTACCTCTCCGGGCGTCCTGTAAGGAAGGTGGTTTCTTaGTGGAAGGCACTGAAACAGGACGCACTAGTTTCAGCTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: SAPYLSGRPVRKVVS*WKALKQDALVSAEP Trigger: AGGTTCAGCTGAAACTAGTGCGTCCTGTTTCAGTGCCTTCCAGCAAGAAACCACCTTCCTTACAGGACGCCCGGAGAGGTACGGGGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | CTCCTGTCATCCATGGAGACCCAAGGTCACCCCAAAGGACAGGCGTaGAGAGCCTCCTGGATCTTCTGGCGACAACGAGAATACTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLSSMETQGHPKGQA*RASWIFWRQREYFC Trigger: GCAGAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGCCTGTCCTTTGGGGTGACCTTGGGTCTCCATGGATGACAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CCA 90 bp | CTCCCGAGTCATTTTCCTTCAGGACAAAGCTCAGGGCTTTTTCACTaGGCCCTGCAAGAAGCCGCAGCTTCAAGGGCTGCTCGTCATCCG | + |
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Preference number: 1 (lower is better) Translates to: LPSHFPSGQSSGLFH*ALQEAAASRAARHP Trigger: CGGATGACGAGCAGCCCTTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAAGCCCTGAGCTTTGTCCTGAAGGAAAATGACTCGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CCA 90 bp | CAAGGTCACCCCAAAGGACAGGCGTGCAGAGCCTCCTGGATCTTCTaGCGACAACGAGAATACTTCTGCAGGATCTGGCGAAGGTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: QGHPKGQACRASWIF*RQREYFCRIWRRCS Trigger: GGAACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGCCTGTCCTTTGGGGTGACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | GCGTGCAGAGCCTCCTGGATCTTCTGGCGACAACGAGAATACTTCTaGAGGATCTGGCGAAGGTGTTCCTCTTCTTCCCGCTGCAGGATT | + |
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Preference number: 1 (lower is better) Translates to: ACRASWIFWRQREYF*RIWRRCSSSSRCRI Trigger: AATCCTGCAGCGGGAAGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | GTCATTTTCCTTCAGGACAAAGCTCAGGGCTTTTTCACTGGGCCCTaGAAGAAGCCGCAGCTTCAAGGGCTGCTCGTCATCCGACAGCTT | + |
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Preference number: 1 (lower is better) Translates to: VIFLQDKAQGFFTGP*KKPQLQGLLVIRQL Trigger: AAGCTGTCGGATGACGAGCAGCCCTTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAAGCCCTGAGCTTTGTCCTGAAGGAAAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CCA 90 bp | AGCTTCAAGGGCTGCTCGTCATCCGACAGCTTCCGGAGGTATACTTaGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SFKGCSSSDSFRRYT*PCRSVRSKSANLRG Trigger: TCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAGCTGTCGGATGACGAGCAGCCCTTGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | AAGGGCTGCTCGTCATCCGACAGCTTCCGGAGGTATACTTGGCCATaGCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGAGGATCATCT | + |
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Preference number: 1 (lower is better) Translates to: KGCSSSDSFRRYTWP*RSVRSKSANLRGSS Trigger: AGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAGCTGTCGGATGACGAGCAGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CCA 90 bp | GCCTCCTGGATCTTCTGGCGACAACGAGAATACTTCTGCAGGATCTaGCGAAGGTGTTCCTCTTCTTCCCGCTGCAGGATTCGTAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: ASWIFWRQREYFCRI*RRCSSSSRCRIRRK Trigger: TTTCCTACGAATCCTGCAGCGGGAAGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | GAATACTTCTGCAGGATCTGGCGAAGGTGTTCCTCTTCTTCCCGCTaGAGGATTCGTAGGAAATTGTGCAGTTCAGGCATGCTGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: EYFCRIWRRCSSSSR*RIRRKLCSSGMLKA Trigger: TGCCTTCAGCATGCCTGAACTGCACAATTTCCTACGAATCCTGCAGCGGGAAGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | CTTCCGGAGGTATACTTGGCCATGCCGTTCAGTTCGCTCAAAGAGTaGAAACTTGCGAGGATCATCTACGACCATGAATTTTCGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LPEVYLAMPFSSLKE*KLARIIYDHEFSKQ Trigger: CTGCTTCGAAAATTCATGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 90 bp | AAGTCAGAAGGCACGGTAAGAGGGAACCCCAGACTCTACCTTAATTaGTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: KSEGTVRGNPRLYLN*LYYSEQLPLALIGL Trigger: TAGCCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGGGTTCCCTCTTACCGTGCCTTCTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACGCACGCTCTTTGCACTaGCTGTTCTCCTCCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PVLWAHPGQQRRTSMHTHARSLH*LFSSCH Trigger: ATGACAGGAGGAGAACAGGCAGTGCAAAGAGCGTGC...GTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCACTGGCCAGCCCTCTCTaGCCCCAGGGTGTTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: CTGQPSLTPGCLFGSQKALASPL*PQGVCL Trigger: CAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAG...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTGCACGCTCTTTGCACTaGCTGTTCTCCTCCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LFSGLIPVSRGGPPCTRTARSLH*LFSSCH Trigger: ATGACAGGAGGAGAACAGGCAGTGCAAAGAGCGTGC...AGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACGCTCTTTGCACTaGCTGTTCTCCTCCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: FPCSLGSSRSAEEDLHAHARSLH*LFSSCH Trigger: ATGACAGGAGGAGAACAGGCAGTGCAAAGAGCGTGC...GTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCAACACGGCACGCTCTTTaGACTGCCTGTTCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FSQASGPDDDCHTPIPSPTRHAL*TACSPP Trigger: AGGAGGAGAACAGGCAGTGCAAAGAGCGTGCCGTGT...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCATCCTCCTGTCATCCATaGAGACCCAAGGTCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSQASGPDDDCHTPIPSPSSCHP*RPKVTP Trigger: TGGGGTGACCTTGGGTCTCCATGGATGACAGGAGGA...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CAA 90 bp | CAGCTTCAAGGGCTGCTCGTCATCCGACAGCTTCCGGAGGTATACTaGGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: QLQGLLVIRQLPEVY*AMPFSSLKECKLAR Trigger: CCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAGCTGTCGGATGACGAGCAGCCCTTGAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCACTGGCCAGCCCTCTCTaGCCCCAGGGTGTTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: YSANSLRHQALMMTVTPPLASPL*PQGVCL Trigger: CAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAG...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGAGGATCATCTACGAAGCAGGGCCTCAATaGCCTCACGTGCCCGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAMPFSSLKECKLARIIYEAGPQ*PHVPVF Trigger: GAACACGGGCACGTGAGGTCATTGAGGCCCTGCTTC...GTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCACCCAGGGTGTTTGTTTaGAAGTCAGAAGGCACGGTA | + |
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Preference number: 2 (lower is better) Translates to: YPQVDGWLFPCSLGSSRSPRVFV*KSEGTV Trigger: TACCGTGCCTTCTGACTTCCAAACAAACACCCTGGG...TGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTGAGACCCATTCATaGCTCAAAACAATCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LFSGLIPVSRGGPPCTRTPETHS*LKTIFL Trigger: GAGAAAGATTGTTTTGAGTCATGAATGGGTCTCAGG...AGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCATACTTCTGCAGGATCTaGCGAAGGTGTTCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FSQASGPDDDCHTPIPSPYFCRI*RRCSSS Trigger: AGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTA...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | CGAAGCAGGGCCTCAATGACCTCACGTGCCCGTGTTCGTGATAGAACATGCAGAAGGAAGGTGGTTTCTTaGTGGAAGGCACTGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: RSRASMTSRARVRDRTCRRKVVS*WKALKQ Trigger: CTGTTTCAGTGCCTTCCAGCAAGAAACCACCTTCCT...TCTGCATGTTCTATCACGAACACGGGCACGTGAGGTCATTGAGGCCCTGCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGGGGAGACTCTGGCTTTaGCAAACAAGAAGAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ESLRFSQLRPCDLSSYAEGRLWL*QTRRGS Trigger: AGACCCTCTTCTTGTTTGCCAAAGCCAGAGTCTCCC...CTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCCAAAGAGTGCAAACTTaGGAGGATCATCTACGACCA | + |
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Preference number: 2 (lower is better) Translates to: LYWPALSDPRVFVWKSEGQRVQT*EDHLRP Trigger: TGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTG...GCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CAA 90 bp | TCAGAAGGCACGGTAAGAGGGAACCCCAGACTCTACCTTAATTGCTaGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGCTATCC | + |
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Preference number: 2 (lower is better) Translates to: SEGTVRGNPRLYLNC*YYSEQLPLALIGLS Trigger: GGATAGCCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGGGTTCCCTCTTACCGTGCCTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR CAA 90 bp | AGGTATACTTGGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTaGCGAGGATCATCTACGACCATGAATTTTCGAAGCAGGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RYTWPCRSVRSKSAN*RGSSTTMNFRSRAS Trigger: TGAGGCCCTGCTTCGAAAATTCATGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAACCCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCACGCTCTTTGCACTaGCTGTTCTCCTCCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GNPRLYLNCLYYSEQLPLARSLH*LFSSCH Trigger: ATGACAGGAGGAGAACAGGCAGTGCAAAGAGCGTGC...CAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGGGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCAAGGTCTCTTACCCGTaGAAATATAACCTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LYWPALSDPRVFVWKSEGKVSYP*KYNLVL Trigger: CAAAACAAGGTTATATTTTCACGGGTAAGAGACCTT...GCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGTGCTCAGTCTCAGCTTaGGAAAGATCGGGTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LYLNCLYYSEQLPLALIGCSVSA*ERSGVS Trigger: GGAGACACCCGATCTTTCTCAAGCTGAGACTGAGCA...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGGGGAGACTCTGGCTTTaGCAAACAAGAAGAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LYLNCLYYSEQLPLALIGGRLWL*QTRRGS Trigger: AGACCCTCTTCTTGTTTGCCAAAGCCAGAGTCTCCC...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGCCTGAGACCCATTCATaGCTCAAAACAATCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PRLYLNCLYYSEQLPLALPETHS*LKTIFL Trigger: GAGAAAGATTGTTTTGAGTCATGAATGGGTCTCAGG...CAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGAGGATCATCTACGACCATGTTCGTGATAGAACATaGAGATGCTTAATAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: MPFSSLKECKLARIIYDHVRDRT*RCLIAS Trigger: GGATGCTATTAAGCATCTGCATGTTCTATCACGAAC...ATGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR-3UTR CCA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAACCCAGGGTGTTTGTTTaGAAGTCAGAAGGCACGGTA | + |
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Preference number: 2 (lower is better) Translates to: YIHTLPSKISEGDSGFGKPRVFV*KSEGTV Trigger: TACCGTGCCTTCTGACTTCCAAACAAACACCCTGGG...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR GCA 72 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATaGACACGCACTCCTCAGGCCCCACAGGCCCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: SGLIPVSRGGPP*TRTPQAPQALS Trigger: TGACAGGGCCTGTGGGGCCTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGCACACGGCACGCTCTTaGCACTGCCTGTTCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQHTARS*HCLFSS Trigger: GGAGGAGAACAGGCAGTGCAAAGAGCGTGCCGTGTG...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTACCTCTCCGGGCGTCCTGTAAGGAAGGTGGTTTCTTGCTGGAAGGCACTGCACACGGCACGCTCTTaGCACTGCCTGTTCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PYLSGRPVRKVVSCWKALHTARS*HCLFSS Trigger: GGAGGAGAACAGGCAGTGCAAAGAGCGTGCCGTGTG...CAGTGCCTTCCAGCAAGAAACCACCTTCCTTACAGGACGCCCGGAGAGGTACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR CCA 72 bp | CAAAGCCCCGCCCCACTATATCCACAGGTAGACGGCTaGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCA | + |
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Preference number: 3 (lower is better) Translates to: QSPAPLYPQVDG*LFPCSLGSSRS Trigger: TGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGGGGCGGGGCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR-3UTR CAA 90 bp | TATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCACACACGGCACGCTCTTaGCACTGCCTGTTCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: YPQVDGWLFPCSLGSSRSHTARS*HCLFSS Trigger: GGAGGAGAACAGGCAGTGCAAAGAGCGTGCCGTGTG...TGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| 3UTR GCA 72 bp | TCCATGGAGACCCAAGGTCACCCCAAAGGACAGGCGTaGAGAGCCTCCTGGATCTTCTGGCGACAACGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SMETQGHPKGQA*RASWIFWRQRE Trigger: TTCTCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGCCTGTCCTTTGGGGTGACCTTGGGTCTCCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
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| 3UTR GCA 72 bp | CTTCAGGACAAAGCTCAGGGCTTTTTCACTGGGCCCTaGAAGAAGCCGCAGCTTCAAGGGCTGCTCGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LQDKAQGFFTGP*KKPQLQGLLVI Trigger: GATGACGAGCAGCCCTTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAAGCCCTGAGCTTTGTCCTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR CCA 72 bp | TACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTaGAAGTCAGAAGGCACGGTAAGAGGGAACCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YWPALSDPRVFV*KSEGTVRGNPR Trigger: TCTGGGGTTCCCTCTTACCGTGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR CCA 72 bp | CAAGGTCACCCCAAAGGACAGGCGTGCAGAGCCTCCTaGATCTTCTGGCGACAACGAGAATACTTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGHPKGQACRAS*IFWRQREYFCR Trigger: CCTGCAGAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGCCTGTCCTTTGGGGTGACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCACCCCAGGGTGTTTGTTaGGAAGTCAGAAGGCACGGT | + |
|
Preference number: 3 (lower is better) Translates to: CTGQPSLTPGCLFGSQKAPQGVC*EVRRHG Trigger: ACCGTGCCTTCTGACTTCCAAACAAACACCCTGGGG...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR GCA 72 bp | GCCTCCTGGATCTTCTGGCGACAACGAGAATACTTCTaGAGGATCTGGCGAAGGTGTTCCTCTTCTTCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: ASWIFWRQREYF*RIWRRCSSSSR Trigger: GCGGGAAGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR CCA 72 bp | GGCTGCTCGTCATCCGACAGCTTCCGGAGGTATACTTaGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GCSSSDSFRRYT*PCRSVRSKSAN Trigger: GTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAGCTGTCGGATGACGAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCAAGGGAGACTCTGGCTTaGGCAAACAAGAAGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CTGQPSLTPGCLFGSQKARETLA*ANKKRV Trigger: GACCCTCTTCTTGTTTGCCAAAGCCAGAGTCTCCCT...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCACTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CTGQPSLTPGCLFGSQKALLSLS*RKIGCL Trigger: GAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAG...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGACAGGCGTGCAGAGCCTCCTGGATCTTCTGGCGACAACGAGAATACTTCCTTCCGGAGGTATACTaGGCCATGCCGTTCAGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: KGQACRASWIFWRQREYFLPEVY*AMPFSS Trigger: CGAACTGAACGGCATGGCCAAGTATACCTCCGGAAG...GAAGTATTCTCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGCCTGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR CCA 72 bp | CATTTTCCTTCAGGACAAAGCTCAGGGCTTTTTCACTaGGCCCTGCAAGAAGCCGCAGCTTCAAGGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HFPSGQSSGLFH*ALQEAAASRAA Trigger: AGCAGCCCTTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAAGCCCTGAGCTTTGTCCTGAAGGAAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR GCA 72 bp | TCGTCATCCGACAGCTTCCGGAGGTATACTTGGCCATaGCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSDSFRRYTWP*RSVRSKSANLR Trigger: TCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAGCTGTCGGATGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR GCA 72 bp | TGCAGGATCTGGCGAAGGTGTTCCTCTTCTTCCCGCTaGAGGATTCGTAGGAAATTGTGCAGTTCAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: CRIWRRCSSSSR*RIRRKLCSSGM Trigger: CATGCCTGAACTGCACAATTTCCTACGAATCCTGCAGCGGGAAGAAGAGGAACACCTTCGCCAGATCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCACTGACCCCAGGGTGTTaGTTTGGAAGTCAGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSANSLRHQALMMTVTPPLTPGC*FGSQKA Trigger: TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAG...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCAAGGGAGACTCTGGCTTaGGCAAACAAGAAGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: YSANSLRHQALMMTVTPPRETLA*ANKKRV Trigger: GACCCTCTTCTTGTTTGCCAAAGCCAGAGTCTCCCT...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR CCA 72 bp | ATCTTCTGGCGACAACGAGAATACTTCTGCAGGATCTaGCGAAGGTGTTCCTCTTCTTCCCGCTGCAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: IFWRQREYFCRI*RRCSSSSRCRI Trigger: AATCCTGCAGCGGGAAGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTGTCGCCAGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR TCA 72 bp | GCAGGATTCGTAGGAAATTGTGCAGTTCAGGCATGCTaGAGGCATCCCAGTTCACCTCTCCCGAGTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: AGFVGNCAVQAC*RHPSSPLPSHF Trigger: AAAATGACTCGGGAGAGGTGAACTGGGATGCCTTCAGCATGCCTGAACTGCACAATTTCCTACGAATCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATCTCTACCTTAATTGCTaGTATTATTCTGAGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SQASGPDDDCHTPIPSPHLYLNC*YYSEQL Trigger: TAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR TCA 72 bp | TCTGAGCAGCTACCCTTGGCTCTGATAGGGCTATCCTaGGACCCATTCATGACTCAAAACAATCTTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SEQLPLALIGLS*DPFMTQNNLSP Trigger: TGGAGAAAGATTGTTTTGAGTCATGAATGGGTCTCAGGATAGCCCTATCAGAGCCAAGGGTAGCTGCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGAGGATTCGTAGGAAATaGTGCAGTTCAGGCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LYLNCLYYSEQLPLALIGRIRRK*CSSGML Trigger: CAGCATGCCTGAACTGCACAATTTCCTACGAATCCT...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR GCA 72 bp | GTATACTTGGCCATGCCGTTCAGTTCGCTCAAAGAGTaGAAACTTGCGAGGATCATCTACGACCATGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: VYLAMPFSSLKE*KLARIIYDHEF Trigger: AAATTCATGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTACATACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTCTGACCCCAGGGTGTTaGTTTGGAAGTCAGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ITYIHTLPSKISEGDSGFLTPGC*FGSQKA Trigger: TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAG...AAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTATGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAACTTCCCCACATTCAGTaGAGGCCACAAAACATTACA | + |
|
Preference number: 3 (lower is better) Translates to: YIHTLPSKISEGDSGFGKLPHIQ*RPQNIT Trigger: TGTAATGTTTTGTGGCCTCAACTGAATGTGGGGAAG...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR TCA 72 bp | CATTACATACATTCATACACTTCCATCAAAAATATCTaGGGGAGACTCTGGCTTTGGCAAACAAGAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HYIHSYTSIKNI*GRLWLWQTRRG Trigger: CCCTCTTCTTGTTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTATGTAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR TCA 72 bp | AAACAATCTTTCTCCATAGGTAAGGTCTCTTACCCGTaGAAATATAACCTTGTTTTGTCTGTAGAGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: KQSFSIGKVSYP*KYNLVLSVESL Trigger: TAGAGACTCTACAGACAAAACAAGGTTATATTTTCACGGGTAAGAGACCTTACCTATGGAGAAAGATTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTGTGCGTGGTGGGCCCTaGAGGCTGGAAACGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSGLIPVSRGGPPCTRTVRGGP*RLETVA Trigger: GGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCAC...AGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACAGGTCGCACCACGTGTaGGTGGTGGGCCCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPCSLGSSRSAEEDLHAHRSHHV*VVGPAG Trigger: GCCTGCAGGGCCCACCACGCACACGTGGTGCGACCT...GTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGGGAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCAGGCTGGAAACGGTaGCCACGACCCGGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPCSLGSSRSAEEDLHAHAGWKR*PRPGTC Trigger: GCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGC...GTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGGGAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGACCACGTGTGCGTGGTaGGCCCTGCAGGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQTTCAW*ALQAGN Trigger: GTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGT...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTTTGTACCCGGGGCGATaGGCAGAGCGTTGGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSGLIPVSRGGPPCTRTLYPGR*AERWHA Trigger: AGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAA...AGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATGTGCGTGGTGGGCCCTaGAGGCTGGAAACGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQASGPDDDCHTPIPSPHVRGGP*RLETVA Trigger: GGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCAC...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATCGCACCACGTGTGCGTaGTGGGCCCTGCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQASGPDDDCHTPIPSPHRTTCA*WALQAG Trigger: TCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCG...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACGATGCGCAGAGCGTTaGCACGCTCCAGCCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSQASGPDDDCHTPIPSPRCAER*HAPAGY Trigger: GTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCG...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | CGAAGCAGGGCCTCAATGACCTCACGTGCCCGTGTTCGTGATAGAACATGCAGAGCAGGCTGGAAACGGTaGCCACGACCCGGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRASMTSRARVRDRTCRAGWKR*PRPGTC Trigger: GCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGC...TCTGCATGTTCTATCACGAACACGGGCACGTGAGGTCATTGAGGCCCTGCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | TATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCACGACGCCCCAGATaGAGTCTCCACAGAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YPQVDGWLFPCSLGSSRSARRPR*SLHRGR Trigger: GCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGC...TGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGTACGGCCTGGACCGATaGGCCCGGACGGTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLRFSQLRPCDLSSYAEYGLDR*ARTVPA Trigger: AGCTGGCACCGTCCGGGCGCATCGGTCCAGGCCGTA...CTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGTGCAGTAGCCACTGCTaGTTGTGCTGCTCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQCSSHC*LCCSRS Trigger: TGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCA...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGGTGGGCCCTGCAGGCTaGAAACGGTGGCCACGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLRFSQLRPCDLSSYAEVGPAG*KRWPRP Trigger: GGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCAC...CTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCGAGTCATTTTCCTTCAGGACAAAGCTCAGGGCTTTTTCACTGGGCCGTGGGCCCTGCAGGCTaGAAACGGTGGCCACGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSHFPSGQSSGLFHWAVGPAG*KRWPRP Trigger: GGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCAC...GGCCCAGTGAAAAAGCCCTGAGCTTTGTCCTGAAGGAAAATGACTCGGGAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTGCTCAGTCTCAGCTTaGGAAAGATCGGGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLWAHPGQQRRTSMHTHCSVSA*ERSGVS Trigger: GGAGACACCCGATCTTTCTCAAGCTGAGACTGAGCA...GTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCAGAAGCAGGGCCTCAATaGCCTCACGTGCCCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSQASGPDDDCHTPIPSPEAGPQ*PHVPVF Trigger: GAACACGGGCACGTGAGGTCATTGAGGCCCTGCTTC...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCATTGTACCCGGGGCGATaGGCAGAGCGTTGGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTGQPSLTPGCLFGSQKALYPGR*AERWHA Trigger: AGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAA...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TTGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCTTGTACCCGGGGCGATaGGCAGAGCGTTGGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYWPALSDPRVFVWKSEGLYPGR*AERWHA Trigger: AGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAA...GCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | CCACTATATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCCACGACCCGGGACGTaGTGCTGTGACGGATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLYPQVDGWLFPCSLGSSPRPGT*CCDGLR Trigger: ACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGG...GGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCACCACGACCCGGGACGTaGTGCTGTGACGGATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CTGQPSLTPGCLFGSQKAPRPGT*CCDGLR Trigger: ACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGG...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGCGATGCGCAGAGCGTTaGCACGCTCCAGCCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLRFSQLRPCDLSSYAERCAER*HAPAGY Trigger: GTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCG...CTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | TATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCGTGCAGAGCCTCCTaGATCTTCTGGCGACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: YPQVDGWLFPCSLGSSRSACRAS*IFWRQR Trigger: TCGTTGTCGCCAGAAGATCCAGGAGGCTCTGCACGC...TGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACCACTGCTGGTTGTGCTaGTCCAGGTCATTTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPCSLGSSRSAEEDLHAHHCWLC*SRSFRR Trigger: CCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTG...GTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
||
| CDS-3UTR GCA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCACGCGCCGTGAAGTACTaGTCGAGCTCCGAGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLRHQALMMTVTPPRAVKY*SSSESE Trigger: CTCGGACTCGGAGCTCGAGCAGTACTTCACGGCGCG...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGCAACGAGAATACTTCTaGAGGATCTGGCGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQQREYF*RIWRRC Trigger: ACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTG...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAACTTGCGAGGATCATCTACGACCATGAATTTTCGAAGCAGGGCCTCATACGGCCTGGACCGATaGGCCCGGACGGTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SANLRGSSTTMNFRSRASYGLDR*ARTVPA Trigger: AGCTGGCACCGTCCGGGCGCATCGGTCCAGGCCGTA...TGAGGCCCTGCTTCGAAAATTCATGGTCGTAGATGATCCTCGCAAGTTTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCACAGGTGAACTTGCAGTaGGCGCACTGTAGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTGQPSLTPGCLFGSQKAQVNLQ*AHCRPL Trigger: CAAGGGCCTACAGTGCGCGCACTGCAAGTTCACCTG...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093786.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGTACTTCTGCAGGATCTaGCGAAGGTGTTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQYFCRI*RRCSSS Trigger: AGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTA...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGCATCCCAGTTCACCTCTCCCGAGTCATTTTCCTTCAGGACAAAGCTCACCACGTGTGCGTGGTaGGCCCTGCAGGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKASQFTSPESFSFRTKLTTCAW*ALQAGN Trigger: GTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGT...GAGCTTTGTCCTGAAGGAAAATGACTCGGGAGAGGTGAACTGGGATGCCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATTGCTCAGTCTCAGCTTaGGAAAGATCGGGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQASGPDDDCHTPIPSPHCSVSA*ERSGVS Trigger: GGAGACACCCGATCTTTCTCAAGCTGAGACTGAGCA...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR TCA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCAGAAGCAGGGCCTCAATaGCCTCACGTGCCCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLRHQALMMTVTPPEAGPQ*PHVPVF Trigger: GAACACGGGCACGTGAGGTCATTGAGGCCCTGCTTC...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR TCA 90 bp | TTGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCAACGGTAATGGCAGGTaGACTTGCAGTGCGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LYWPALSDPRVFVWKSEGNGNGR*TCSART Trigger: AGTGCGCGCACTGCAAGTTCACCTGCCATTACCGTT...GCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093786.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACCAAAGAGTGCAAACTTaGGAGGATCATCTACGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLWAHPGQQRRTSMHTHQRVQT*EDHLRP Trigger: TGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTG...GTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGTACGGCCTGGACCGATaGGCCCGGACGGTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRLYLNCLYYSEQLPLALYGLDR*ARTVPA Trigger: AGCTGGCACCGTCCGGGCGCATCGGTCCAGGCCGTA...CAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTTACTTCTGCAGGATCTaGCGAAGGTGTTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSGLIPVSRGGPPCTRTYFCRI*RRCSSS Trigger: AGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTA...AGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGGTGGGCCCTGCAGGCTaGAAACGGTGGCCACGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PRLYLNCLYYSEQLPLALVGPAG*KRWPRP Trigger: GGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCAC...CAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR CAA 72 bp | GGGCTGCTCGTCATCCGACAGCTTCCGGAGGTATACTaGGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLVIRQLPEVY*AMPFSSLKECK Trigger: TTTGCACTCTTTGAGCGAACTGAACGGCATGGCCAAGTATACCTCCGGAAGCTGTCGGATGACGAGCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGGCGAGGTACGCGCCGTaGAGTACTGCTCGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRLYLNCLYYSEQLPLALARYAP*STARAP Trigger: CGGAGCTCGAGCAGTACTTCACGGCGCGTACCTCGC...CAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACGCACTAGTTTCAGCTaGACCTTGATGAAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSQASGPDDDCHTPIPSPRTSFS*TLMKPV Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAACTAGTGCG...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTTGCGAGGATCATCTACGACCATGCACGACGCCCCAGATaGAGTCTCCACAGAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MPFSSLKECKLARIIYDHARRPR*SLHRGR Trigger: GCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGC...ATGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACAGGAAGGTGGTTTCTTaGTGGAAGGCACTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPCSLGSSRSAEEDLHAHRKVVS*WKALKQ Trigger: CTGTTTCAGTGCCTTCCAGCAAGAAACCACCTTCCT...GTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCATTTTTCACTGGGCCCTaGAAGAAGCCGCAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSQASGPDDDCHTPIPSPFFTGP*KKPQLQ Trigger: TTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAA...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGAGGTCGCACCACGTGTaGGTGGTGGGCCCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYLNCLYYSEQLPLALIGRSHHV*VVGPAG Trigger: GCCTGCAGGGCCCACCACGCACACGTGGTGCGACCT...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACCCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGCGATGCGCAGAGCGTTaGCACGCTCCAGCCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GNPRLYLNCLYYSEQLPLRCAER*HAPAGY Trigger: GTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCG...CAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGGGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGCGCACCACGTGTGCGTaGTGGGCCCTGCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYLNCLYYSEQLPLALIGRTTCA*WALQAG Trigger: TCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCG...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | GGGAACCCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCACGACGCCCCAGATaGAGTCTCCACAGAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GNPRLYLNCLYYSEQLPLARRPR*SLHRGR Trigger: GCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGC...CAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGGGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCAAGGAAGGTGGTTTCTTaGTGGAAGGCACTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQASGPDDDCHTPIPSPRKVVS*WKALKQ Trigger: CTGTTTCAGTGCCTTCCAGCAAGAAACCACCTTCCT...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATAGGAAGGTGGTTTCTTaGTGGAAGGCACTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQASGPDDDCHTPIPSPHRKVVS*WKALKQ Trigger: CTGTTTCAGTGCCTTCCAGCAAGAAACCACCTTCCT...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGGTTCGTGATAGAACATaGAGATGCTTAATAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQVRDRT*RCLIAS Trigger: GGATGCTATTAAGCATCTGCATGTTCTATCACGAAC...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCGGTCATCCTCTTCTTCCCGCTaGAGGATTCGTAGGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: YPQVDGWLFPCSLGSSRSSSSSR*RIRRKL Trigger: CAATTTCCTACGAATCCTGCAGCGGGAAGAAGAGGA...TGACCGGGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGGGCTGCAGTAGCCACTaGTGGTTGTGCTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRLYLNCLYYSEQLPLALGCSSH*WLCCSR Trigger: CCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCC...CAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATAGTTCGCTCAAAGAGTaGAAACTTGCGAGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQASGPDDDCHTPIPSPHSSLKE*KLARII Trigger: GATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACT...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | CCACTATATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCTCCTCTTCTTCCCGCTaGAGGATTCGTAGGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLYPQVDGWLFPCSLGSSSSSSR*RIRRKL Trigger: CAATTTCCTACGAATCCTGCAGCGGGAAGAAGAGGA...GGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCACAACGAGAATACTTCTaGAGGATCTGGCGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CTGQPSLTPGCLFGSQKAQREYF*RIWRRC Trigger: ACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTG...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGCCACGACCCGGGACGTaGTGCTGTGACGGATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLNCLYYSEQLPLALIGPRPGT*CCDGLR Trigger: ACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGG...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR CCA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCCGCACCACGTGTGCGTaGTGGGCCCTGCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYNLVLSVESLRFSQLRPRTTCA*WALQAG Trigger: TCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCG...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCACGCACTAGTTTCAGCTaGACCTTGATGAAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLRHQALMMTVTPPRTSFS*TLMKPV Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAACTAGTGCG...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | CCACTATATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCAGTTCGCTCAAAGAGTaGAAACTTGCGAGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLYPQVDGWLFPCSLGSSSSLKE*KLARII Trigger: GATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACT...GGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCAATTCGTAGGAAATTGTaGAGTTCAGGCATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQASGPDDDCHTPIPSPIRRKL*SSGMLK Trigger: CTTCAGCATGCCTGAACTGCACAATTTCCTACGAAT...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAAGTGCGTGGTGGGCCCTaGAGGCTGGAAACGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLPSKISEGDSGFGKVRGGP*RLETVA Trigger: GGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCAC...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAAAGGTCGCACCACGTGTaGGTGGTGGGCCCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLPSKISEGDSGFGKRSHHV*VVGPAG Trigger: GCCTGCAGGGCCCACCACGCACACGTGGTGCGACCT...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| 3UTR CAA 72 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTaGAGCAGCTACGCAGAGTATGACCCAGTACATACG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRFSQLRPCD*SSYAEYDPVHT Trigger: CGTATGTACTGGGTCATACTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
||
| CDS-3UTR GCA 90 bp | TTGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCATTCGTAGGAAATTGTaGAGTTCAGGCATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYWPALSDPRVFVWKSEGIRRKL*SSGMLK Trigger: CTTCAGCATGCCTGAACTGCACAATTTCCTACGAAT...GCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR GCA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGGGTGAACTTGCAGTCTaGAGAAAGGGGCGCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLNCLYYSEQLPLALIGGELAV*RKGRAL Trigger: CAGTGCGCGCCCCTTTCTGCAGACTGCAAGTTCACC...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122225.8 |
||
| CDS-3UTR CCA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCACCACGTGTGCGTGGTaGGCCCTGCAGGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KYNLVLSVESLRFSQLRPTTCAW*ALQAGN Trigger: GTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGT...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS-3UTR GCA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCCCGAGTCCTCCTGGCTaGAGTAGCCACTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KYNLVLSVESLRFSQLRPPSPPG*SSHCWL Trigger: CAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGG...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS-3UTR GCA 90 bp | TATTCAGCCAATTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCAAGTTCGCTCAAAGAGTaGAAACTTGCGAGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLRHQALMMTVTPPSSLKE*KLARII Trigger: GATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACT...TGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAATTGGCTGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CCA 90 bp | TCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGTATTACTTCTGCAGGATCTaGCGAAGGTGTTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRFSQLRPCDLSSYAEYYFCRI*RRCSSS Trigger: AGAAGAGGAACACCTTCGCCAGATCCTGCAGAAGTA...ATACTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| 3UTR CAA 72 bp | TGGCCATGCCGTTCAGTTCGCTCAAAGAGTGCAAACTaGCGAGGATCATCTACGACCATGAATTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPCRSVRSKSAN*RGSSTTMNFRS Trigger: GCTTCGAAAATTCATGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGAGCGAACTGAACGGCATGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR TCA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAAGAAGCAGGGCCTCAATaGCCTCACGTGCCCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLPSKISEGDSGFGKEAGPQ*PHVPVF Trigger: GAACACGGGCACGTGAGGTCATTGAGGCCCTGCTTC...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGGTTCGTGATAGAACATaGAGATGCTTAATAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLRFSQLRPCDLSSYAEVRDRT*RCLIAS Trigger: GGATGCTATTAAGCATCTGCATGTTCTATCACGAAC...CTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGTATATTCGTAGGAAATTGTaGAGTTCAGGCATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRFSQLRPCDLSSYAEYIRRKL*SSGMLK Trigger: CTTCAGCATGCCTGAACTGCACAATTTCCTACGAAT...ATACTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR GCA 90 bp | CCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGCAACGAGAATACTTCTaGAGGATCTGGCGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRLYLNCLYYSEQLPLALQREYF*RIWRRC Trigger: ACACCTTCGCCAGATCCTGCAGAAGTATTCTCGTTG...CAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| 3UTR CAA 72 bp | CACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTaGGCAAACAAGAAGAGGGTCTGGTCCAGCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFHQKYLRETLA*ANKKRVWSSNL Trigger: AAGGTTGCTGGACCAGACCCTCTTCTTGTTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS-3UTR GCA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCAGCCACTGCTGGTTGTaGTGCTCCAGGTCATTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KYNLVLSVESLRFSQLRPSHCWL*CSRSFR Trigger: TCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCT...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
||
| CDS-3UTR GCA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCTTTTTCACTGGGCCCTaGAAGAAGCCGCAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KYNLVLSVESLRFSQLRPFFTGP*KKPQLQ Trigger: TTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAA...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR GCA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAATTTTTCACTGGGCCCTaGAAGAAGCCGCAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLPSKISEGDSGFGKFFTGP*KKPQLQ Trigger: TTGAAGCTGCGGCTTCTTGCAGGGCCCAGTGAAAAA...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR TCA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAAAACGGTAATGGCAGGTaGACTTGCAGTCTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLPSKISEGDSGFGKNGNGR*TCSLQK Trigger: TTTCTGCAGACTGCAAGTTCACCTGCCATTACCGTT...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122225.8 |
||
| CDS-3UTR GCA 90 bp | ACATTACATACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTCCTCTTCTTCCCGCTaGAGGATTCGTAGGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHTFIHFHQKYLRETLASSSSR*RIRRKL Trigger: CAATTTCCTACGAATCCTGCAGCGGGAAGAAGAGGA...AGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTATGTAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR GCA 90 bp | ATTACATACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTCAAAGAGTGCAAACTTaGGAGGATCATCTACGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ITYIHTLPSKISEGDSGFQRVQT*EDHLRP Trigger: TGGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTG...AAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTATGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR GCA 90 bp | ATTACATACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGTTCGTGATAGAACATaGAGATGCTTAATAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ITYIHTLPSKISEGDSGFVRDRT*RCLIAS Trigger: GGATGCTATTAAGCATCTGCATGTTCTATCACGAAC...AAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTATGTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS CCA 90 bp | GCTGTGACGGATTGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTTaGCACGCTCCAGCCGGGTACGGCCTGGACCGATGCGCCCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: AVTDCVLYPGRCAER*HAPAGYGLDRCART Trigger: CGTCCGGGCGCATCGGTCCAGGCCGTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 90 bp | CCGGGACGTGCTGCTGTGACGGATTGCGTGTTGTACCCGGGGCGATaGGCAGAGCGTTGGCACGCTCCAGCCGGGTACGGCCTGGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: PGRAAVTDCVLYPGR*AERWHAPAGYGLDR Trigger: TCGGTCCAGGCCGTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 90 bp | GTGGGCCCTGCAGGCTGGAAACGGTGGCCACGACCCGGGACGTGCTaGTGTGACGGATTGCGTGTTGTACCCGGGGCGATGCGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VGPAGWKRWPRPGTC*CDGLRVVPGAMRRA Trigger: CGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 90 bp | CGCACGACGCCCCAGATGAAGTCTCCACAGAGGTCGCACCACGTGTaGGTGGTGGGCCCTGCAGGCTGGAAACGGTGGCCACGACCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTTPQMKSPQRSHHV*VVGPAGWKRWPRPG Trigger: CCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 90 bp | CATCCTGGTCCCGACGCGGCCTGCGGACCAGCGAGGTACGCGCCGTaGAGTACTGCTCGAGCTCCGAGTCCGAGTCCTCCTGGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HPGPDAACGPARYAP*STARAPSPSPPGCS Trigger: ACTGCAGCCAGGAGGACTCGGACTCGGAGCTCGAGCAGTACTTCACGGCGCGTACCTCGCTGGTCCGCAGGCCGCGTCGGGACCAGGATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS TCA 90 bp | CCCTGCAGGCTGGAAACGGTGGCCACGACCCGGGACGTGCTGCTGTaGCGGATTGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCRLETVATTRDVLL*RIACCTRGDAQSVG Trigger: GCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 90 bp | GTGGTGGGCCCTGCAGGCTGGAAACGGTGGCCACGACCCGGGACGTaGTGCTGTGACGGATTGCGTGTTGTACCCGGGGCGATGCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVGPAGWKRWPRPGT*CCDGLRVVPGAMRR Trigger: TCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 90 bp | CAGAAAGGGGCGCGCACTGTAGGCCCTTGCGCACGACGCCCCAGATaGAGTCTCCACAGAGGTCGCACCACGTGTGCGTGGTGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKGARTVGPCARRPR*SLHRGRTTCAWWAL Trigger: CAGGGCCCACCACGCACACGTGGTGCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGCGCCCCTTTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122225.8 |
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| CDS GCA 90 bp | GCTGGAAACGGTGGCCACGACCCGGGACGTGCTGCTGTGACGGATTaGGTGTTGTACCCGGGGCGATGCGCAGAGCGTTGGCACGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGNGGHDPGRAAVTD*VLYPGRCAERWHAP Trigger: TGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CCA 90 bp | TCTCCACAGAGGTCGCACCACGTGTGCGTGGTGGGCCCTGCAGGCTaGAAACGGTGGCCACGACCCGGGACGTGCTGCTGTGACGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SPQRSHHVCVVGPAG*KRWPRPGTCCCDGL Trigger: CAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCGACCTCTGTGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 90 bp | ACTTGCAGTGCGCGCACTGTAGGCCCTTGCGCACGACGCCCCAGATaGAGTCTCCACAGAGGTCGCACCACGTGTGCGTGGTGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSARTVGPCARRPR*SLHRGRTTCAWWAL Trigger: CAGGGCCCACCACGCACACGTGGTGCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGCGCACTGCAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093786.9 |
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| CDS CCA 90 bp | AGGTCGCACCACGTGTGCGTGGTGGGCCCTGCAGGCTGGAAACGGTaGCCACGACCCGGGACGTGCTGCTGTGACGGATTGCGTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSHHVCVVGPAGWKR*PRPGTCCCDGLRVV Trigger: TACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCGACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 90 bp | CGCAGCAGTCCAAGCAGACGAGCGCGCGACAACGGTAATGGCAGGTaGACTTGCAGTCTGCAGAAAGGGGCGCGCACTGTAGGCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSPSRRARDNGNGR*TCSLQKGARTVGPC Trigger: GCAAGGGCCTACAGTGCGCGCCCCTTTCTGCAGACTGCAAGTTCACCTGCCATTACCGTTGTCGCGCGCTCGTCTGCTTGGACTGCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122225.8 |
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| CDS GCA 90 bp | GCTCCGAGTCCGAGTCCTCCTGGCTGCAGTAGCCACTGCTGGTTGTaGTGCTCCAGGTCATTTCGAAGGAAGGTGTTTCAGCCTCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: APSPSPPGCSSHCWL*CSRSFRRKVFQPRP Trigger: TGGGCGAGGCTGAAACACCTTCCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGGACTCGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCCTCAGCTTCCGGAGGTATACTaGGCCATGCCGTTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGLIPVSRGGPPCTRTPQLPEVY*AMPFSS Trigger: CGAACTGAACGGCATGGCCAAGTATACCTCCGGAAG...CTGAGGAGTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCTAAGATTCTCACAGCTGCGACCCTGTGACTTGAGCAGCTACGCAGAGGCGCACTGTAGGCCCTaGCGCACGACGCCCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ESLRFSQLRPCDLSSYAEAHCRP*RTTPQM Trigger: CATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGC...CTCTGCGTAGCTGCTCAAGTCACAGGGTCGCAGCTGTGAGAATCTTAGAGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CCA 90 bp | GCTCGAGCTCCGAGTCCGAGTCCTCCTGGCTGCAGTAGCCACTGCTaGTTGTGCTGCTCCAGGTCATTTCGAAGGAAGGTGTTTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARAPSPSPPGCSSHC*LCCSRSFRRKVFQP Trigger: AGGCTGAAACACCTTCCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGGACTCGGAGCTCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS GCA 90 bp | ACTGCTCGAGCTCCGAGTCCGAGTCCTCCTGGCTGCAGTAGCCACTaGTGGTTGTGCTGCTCCAGGTCATTTCGAAGGAAGGTGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TARAPSPSPPGCSSH*WLCCSRSFRRKVFQ Trigger: CTGAAACACCTTCCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGGACTCGGAGCTCGAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS-3UTR CAA 90 bp | CCTGTTCTCTGGGCTCATCCCGGTCAGCAGAGGAGGACCTCCATGCACACGCACTCAAAGAGTGCAAACTaGCGAGGATCATCTACGACC | + |
|
Preference number: 5 (lower is better) Translates to: PVLWAHPGQQRRTSMHTHSKSAN*RGSSTT Trigger: GGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGA...GTGCGTGTGCATGGAGGTCCTCCTCTGCTGACCGGGATGAGCCCAGAGAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | TCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACATCTTCCGGAGGTATACTaGGCCATGCCGTTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQASGPDDDCHTPIPSPHLPEVY*AMPFSS Trigger: CGAACTGAACGGCATGGCCAAGTATACCTCCGGAAG...ATGTGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCACTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSQASGPDDDCHTPIPSPLLSLS*RKIGCL Trigger: GAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAG...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCTGAACCTTGATGAAGCCTGTGTAGGAGCCATCCTTATTCAGGCTCATGCGATGCGCAGAGCGTaGGCACGCTCCAGCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FQLNLDEACVGAILIQAHAMRRA*ARSSRV Trigger: TACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGC...ATGAGCCTGAATAAGGATGGCTCCTACACAGGCTTCATCAAGGTTCAGCTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156198.8 |
||
| CDS-3UTR CAA 90 bp | CCACTATATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCCTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLYPQVDGWLFPCSLGSSLLSLS*RKIGCL Trigger: GAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAG...GGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
||
| CDS-3UTR CAA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGGCGATGCGCAGAGCGTaGGCACGCTCCAGCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LYLNCLYYSEQLPLALIGAMRRA*ARSSRV Trigger: TACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGC...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS-3UTR CAA 90 bp | TGTACTGGCCAGCCCTCTCTGACCCCAGGGTGTTTGTTTGGAAGTCAGAAGGCAAGGCTCATGAAGAGGTaGCTGTTGATCTGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGQPSLTPGCLFGSQKARLMKR*LLIWPL Trigger: CAATGGCCAGATCAACAGCAACCTCTTCATGAGCCT...TGCCTTCTGACTTCCAAACAAACACCCTGGGGTCAGAGAGGGCTGGCCAGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTCAGGCATCAGGCCCTGATGATGACTGTCACACCCCCATCCCTTCCCCAAGGATTCGTAGGAAATaGTGCAGTTCAGGCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: FSQASGPDDDCHTPIPSPRIRRK*CSSGML Trigger: CAGCATGCCTGAACTGCACAATTTCCTACGAATCCT...TGGGGAAGGGATGGGGGTGTGACAGTCATCATCAGGGCCTGATGCCTGAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | CCACTATATCCACAGGTAGACGGCTGGCTCTTTCCCTGTTCTCTGGGCTCATCCAGGATTCGTAGGAAATaGTGCAGTTCAGGCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLYPQVDGWLFPCSLGSSRIRRK*CSSGML Trigger: CAGCATGCCTGAACTGCACAATTTCCTACGAATCCT...GGATGAGCCCAGAGAACAGGGAAAGAGCCAGCCGTCTACCTGTGGATATAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCGCGATGCGCAGAGCGTaGGCACGCTCCAGCCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: KYNLVLSVESLRFSQLRPAMRRA*ARSSRV Trigger: TACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGC...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS-3UTR CAA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCGCGCACTGTAGGCCCTaGCGCACGACGCCCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: KYNLVLSVESLRFSQLRPAHCRP*RTTPQM Trigger: CATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGC...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS-3UTR CAA 90 bp | GGGAACCCCAGACTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGTCAAAGAGTGCAAACTaGCGAGGATCATCTACGACC | + |
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Preference number: 5 (lower is better) Translates to: GNPRLYLNCLYYSEQLPLSKSAN*RGSSTT Trigger: GGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGA...CAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAGTCTGGGGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCCTTCCGGAGGTATACTaGGCCATGCCGTTCAGTTCG | + |
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Preference number: 5 (lower is better) Translates to: KYNLVLSVESLRFSQLRPLPEVY*AMPFSS Trigger: CGAACTGAACGGCATGGCCAAGTATACCTCCGGAAG...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | AAATATAACCTTGTTTTGTCTGTAGAGTCTCTAAGATTCTCACAGCTGCGACCCCTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: KYNLVLSVESLRFSQLRPLLSLS*RKIGCL Trigger: GAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAG...GGGTCGCAGCTGTGAGAATCTTAGAGACTCTACAGACAAAACAAGGTTATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | CTCTACCTTAATTGCTTGTATTATTCTGAGCAGCTACCCTTGGCTCTGATAGGGTCAAAGAGTGCAAACTaGCGAGGATCATCTACGACC | + |
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Preference number: 5 (lower is better) Translates to: LYLNCLYYSEQLPLALIGSKSAN*RGSSTT Trigger: GGTCGTAGATGATCCTCGCAAGTTTGCACTCTTTGA...CCCTATCAGAGCCAAGGGTAGCTGCTCAGAATAATACAAGCAATTAAGGTAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS-3UTR CAA 90 bp | TACATTCATACACTTCCATCAAAAATATCTGAGGGAGACTCTGGCTTTGGCAAAAGTAGCCACTGCTGGTaGTGCTGCTCCAGGTCATTT | + |
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Preference number: 5 (lower is better) Translates to: YIHTLPSKISEGDSGFGKSSHCW*CCSRSF Trigger: AAATGACCTGGAGCAGCACAACCAGCAGTGGCTACT...TTTGCCAAAGCCAGAGTCTCCCTCAGATATTTTTGATGGAAGTGTATGAATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS CAA 90 bp | TGCTGTGACGGATTGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTaGGCACGCTCCAGCCGGGTACGGCCTGGACCGATGCGCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: CCDGLRVVPGAMRRA*ARSSRVRPGPMRPD Trigger: GTCCGGGCGCATCGGTCCAGGCCGTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CAA 90 bp | AACGGTGGCCACGACCCGGGACGTGCTGCTGTGACGGATTGCGTGTaGTACCCGGGGCGATGCGCAGAGCGTTGGCACGCTCCAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: NGGHDPGRAAVTDCV*YPGRCAERWHAPAG Trigger: CCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 72 bp | CCCGACGCGGCCTGCGGACCAGCGAGGTACGCGCCGTaGAGTACTGCTCGAGCTCCGAGTCCGAGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PDAACGPARYAP*STARAPSPSPP Trigger: AGGAGGACTCGGACTCGGAGCTCGAGCAGTACTTCACGGCGCGTACCTCGCTGGTCCGCAGGCCGCGTCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS GCA 72 bp | TCCACAGAGGTCGCACCACGTGTGCGTGGTGGGCCCTaGAGGCTGGAAACGGTGGCCACGACCCGGGACGTG | + |
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Preference number: 6 (lower is better) Translates to: STEVAPRVRGGP*RLETVATTRDV Trigger: CACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCGACCTCTGTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CCA 72 bp | AGGTCGCACCACGTGTGCGTGGTGGGCCCTGCAGGCTaGAAACGGTGGCCACGACCCGGGACGTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSHHVCVVGPAG*KRWPRPGTCCC Trigger: ACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCACACGTGGTGCGACCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CAA 90 bp | GGCTGGAAACGGTGGCCACGACCCGGGACGTGCTGCTGTGACGGATaGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTTGGCACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GWKRWPRPGTCCCDG*RVVPGAMRRALARS Trigger: GGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 72 bp | GCTGCTGTGACGGATTGCGTGTTGTACCCGGGGCGATaGGCAGAGCGTTGGCACGCTCCAGCCGGGTACGGC | + |
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Preference number: 6 (lower is better) Translates to: AAVTDCVLYPGR*AERWHAPAGYG Trigger: GCCGTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 72 bp | GGTGGCCACGACCCGGGACGTGCTGCTGTGACGGATTaGGTGTTGTACCCGGGGCGATGCGCAGAGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GGHDPGRAAVTD*VLYPGRCAERW Trigger: CCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 72 bp | CCTGCAGGCTGGAAACGGTGGCCACGACCCGGGACGTaGTGCTGTGACGGATTGCGTGTTGTACCCGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PAGWKRWPRPGT*CCDGLRVVPGA Trigger: CGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CCA 72 bp | GATTGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTTaGCACGCTCCAGCCGGGTACGGCCTGGACCGATGC | + |
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Preference number: 6 (lower is better) Translates to: DCVLYPGRCAER*HAPAGYGLDRC Trigger: GCATCGGTCCAGGCCGTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CCA 72 bp | CACGTGTGCGTGGTGGGCCCTGCAGGCTGGAAACGGTaGCCACGACCCGGGACGTGCTGCTGTGACGGATTG | + |
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Preference number: 6 (lower is better) Translates to: HVCVVGPAGWKR*PRPGTCCCDGL Trigger: CAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGCAGGGCCCACCACGCACACGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CAA 72 bp | GGATTGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTaGGCACGCTCCAGCCGGGTACGGCCTGGACCGATG | + |
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Preference number: 6 (lower is better) Translates to: GLRVVPGAMRRA*ARSSRVRPGPM Trigger: CATCGGTCCAGGCCGTACCCGGCTGGAGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CAA 72 bp | CGGTGGCCACGACCCGGGACGTGCTGCTGTGACGGATaGCGTGTTGTACCCGGGGCGATGCGCAGAGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: RWPRPGTCCCDG*RVVPGAMRRAL Trigger: CAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 72 bp | CTGGAAACGGTGGCCACGACCCGGGACGTGCTGCTGTaGCGGATTGCGTGTTGTACCCGGGGCGATGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LETVATTRDVLL*RIACCTRGDAQ Trigger: CTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 72 bp | GCGCGCACTGTAGGCCCTTGCGCACGACGCCCCAGATaGAGTCTCCACAGAGGTCGCACCACGTGTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: ARTVGPCARRPR*SLHRGRTTCAW Trigger: CCACGCACACGTGGTGCGACCTCTGTGGAGACTTCATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS GCA 72 bp | GCAGGCTGGAAACGGTGGCCACGACCCGGGACGTGCTaGTGTGACGGATTGCGTGTTGTACCCGGGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: AGWKRWPRPGTC*CDGLRVVPGAM Trigger: CATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTGGCCACCGTTTCCAGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS CCA 72 bp | GAAAGATCGGGTGTCTCCCGCTCTACAGCCTCATCCTaGTCCCGACGCGGCCTGCGGACCAGCGAGGTACGC | + |
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Preference number: 6 (lower is better) Translates to: ERSGVSRSTASS*SRRGLRTSEVR Trigger: GCGTACCTCGCTGGTCCGCAGGCCGCGTCGGGACCAGGATGAGGCTGTAGAGCGGGAGACACCCGATCTTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS CAA 72 bp | CACGACCCGGGACGTGCTGCTGTGACGGATTGCGTGTaGTACCCGGGGCGATGCGCAGAGCGTTGGCACGCT | + |
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Preference number: 6 (lower is better) Translates to: HDPGRAAVTDCV*YPGRCAERWHA Trigger: AGCGTGCCAACGCTCTGCGCATCGCCCCGGGTACAACACGCAATCCGTCACAGCAGCACGTCCCGGGTCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 ENSMUST00000156198.8 |
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| CDS TCA 72 bp | CCAAGCAGACGAGCGCGCGACAACGGTAATGGCAGGTaGACTTGCAGTGCGCGCACTGTAGGCCCTTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PSRRARDNGNGR*TCSARTVGPCA Trigger: TGCGCAAGGGCCTACAGTGCGCGCACTGCAAGTTCACCTGCCATTACCGTTGTCGCGCGCTCGTCTGCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093786.9 |
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| CDS CAA 72 bp | TGGCAGGTGAACTTGCAGTGCGCGCACTGTAGGCCCTaGCGCACGACGCCCCAGATGAAGTCTCCACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: WQVNLQCAHCRP*RTTPQMKSPQR Trigger: CCTCTGTGGAGACTTCATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGCGCACTGCAAGTTCACCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093786.9 |
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| CDS CAA 72 bp | TTGCAGTCTGCAGAAAGGGGCGCGCACTGTAGGCCCTaGCGCACGACGCCCCAGATGAAGTCTCCACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQSAERGAHCRP*RTTPQMKSPQR Trigger: CCTCTGTGGAGACTTCATCTGGGGCGTCGTGCGCAAGGGCCTACAGTGCGCGCCCCTTTCTGCAGACTGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122225.8 |
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| CDS GCA 72 bp | AGTACTGCTCGAGCTCCGAGTCCGAGTCCTCCTGGCTaGAGTAGCCACTGCTGGTTGTGCTGCTCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: STARAPSPSPPG*SSHCWLCCSRS Trigger: TGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGGACTCGGAGCTCGAGCAGTACT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS CAA 90 bp | CGAGCTCCGAGTCCGAGTCCTCCTGGCTGCAGTAGCCACTGCTGGTaGTGCTGCTCCAGGTCATTTCGAAGGAAGGTGTTTCAGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RAPSPSPPGCSSHCW*CCSRSFRRKVFQPR Trigger: GCGAGGCTGAAACACCTTCCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGGACTCGGAGCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS TCA 72 bp | CCAAGCAGACGAGCGCGCGACAACGGTAATGGCAGGTaGACTTGCAGTCTGCAGAAAGGGGCGCGCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: PSRRARDNGNGR*TCSLQKGARTV Trigger: TACAGTGCGCGCCCCTTTCTGCAGACTGCAAGTTCACCTGCCATTACCGTTGTCGCGCGCTCGTCTGCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122225.8 |
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| CDS CCA 72 bp | CCGAGTCCGAGTCCTCCTGGCTGCAGTAGCCACTGCTaGTTGTGCTGCTCCAGGTCATTTCGAAGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSPSPPGCSSHC*LCCSRSFRRKV Trigger: CACCTTCCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACTCGGACTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS GCA 72 bp | AGTCCTCCTGGCTGCAGTAGCCACTGCTGGTTGTGCTaGTCCAGGTCATTTCGAAGGAAGGTGTTTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPPGCSSHCWLC*SRSFRRKVFQP Trigger: AGGCTGAAACACCTTCCTTCGAAATGACCTGGAGCAGCACAACCAGCAGTGGCTACTGCAGCCAGGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS CAA 90 bp | GTTGATCTGGCCATTGTAGTCCTTGATTTTCTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTCCCGCTCTACAGCCTCATCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VDLAIVVLDFLLSLS*RKIGCLPLYSLILV Trigger: GACCAGGATGAGGCTGTAGAGCGGGAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAGAAAATCAAGGACTACAATGGCCAGATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010211.7 |
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| CDS CAA 72 bp | GCCATTGTAGTCCTTGATTTTCTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTCCCGCTCTACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AIVVLDFLLSLS*RKIGCLPLYSL Trigger: GAGGCTGTAGAGCGGGAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAGAAAATCAAGGACTACAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010211.7 ENSMUST00000093786.9 ENSMUST00000122225.8 |
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| CDS CAA 90 bp | GTTGATCTGGCCATTGTAGTCCTTGATTTTCTGCTCAGTCTCAGCTaGAGAAAGATCGGGTGTCTCCCGCTCTACAGCCTCATCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: VDLAIVVLDFLLSLS*RKIGCLPLYSLIHV Trigger: AACGTGGATGAGGCTGTAGAGCGGGAGACACCCGATCTTTCTCAAGCTGAGACTGAGCAGAAAATCAAGGACTACAATGGCCAGATCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093786.9 ENSMUST00000122225.8 |
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