Pregenerated sensors for RASL11A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029641Ensembl transcript IDs: ENSMUST00000031646.8
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGCTGGCCAGCACGGCCAGCTTaGTGTCCTTGGGCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: AAQMSSSNNSNPPVYLSWPARPA*CPWAGG Trigger: ACCTCCTGCCCAAGGACATCAAGCTGGCCGTGCTGG...CCAGCTCAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CCA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCAGGAGGACTCCGGGATaGGGGCCAGCAGAAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVRRTPG*GPAESA Trigger: GGCACTTTCTGCTGGCCCCCATCCCGGAGTCCTCCT...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCCGCCTCTTCAGGTCCTaGATGTTGGGGGATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVRLFRS*MLGDRG Trigger: GCCTCGATCCCCCAACATGCAGGACCTGAAGAGGCG...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGGGGGCCAGCAGAAAGTaGCCAGACATGGTGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLGASRK*PDMVSG Trigger: GCCGCTCACCATGTCTGGGCACTTTCTGCTGGCCCC...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | GGAAAGGGCCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCTGTCTTGGGCCTGAATaGCTCCCGGAGTGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GKGQSLWLHKCLVVIIATCLGPE*LPECPG Trigger: TCCAGGACACTCCGGGAGGCATTCAGGCCCAAGACA...GGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGGCCCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CCA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCGCTTTTCCATCAGGGTaGACCTTCCGGATGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVAFPSG*TFRMCW Trigger: CCAGCACATCCGGAAGGTCCACCCTGATGGAAAAGC...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CCA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGTCAGGTCCTGCATGTTaGGGGATCGAGGCCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLSGPAC*GIEAGE Trigger: TTCCCCGGCCTCGATCCCCCAACATGCAGGACCTGA...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGGCCTTCGTGTGTCTaGACCTGCCGGGCATGCAAA | + |
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Preference number: 4 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLRPSCV*TCRACK Trigger: TTTGCATGCCCGGCAGGTGCAGACACACGAAGGCCT...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR TCA 90 bp | GCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGCTGGGTTCGTAGTCGCCGATaGATCTCTTGGTCAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: AAQMSSSNNSNPPVYLSWVRSRR*ISWSRS Trigger: GCTTCTTGACCAAGAGATTCATCGGCGACTACGAAC...CCAGCTCAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR TCA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCAATCCACCATTTGACTaGGGCTGTCTTGGGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVNPPFD*GCLGPE Trigger: TTCAGGCCCAAGACAGCCTCAGTCAAATGGTGGATT...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | GCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGCTGGAAGCCCTCTGCCCAGTaGACACTTTTGGTCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: AAQMSSSNNSNPPVYLSWKPSAQ*TLLVRE Trigger: TTCTCTGACCAAAAGTGTGCACTGGGCAGAGGGCTT...CCAGCTCAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGTCGTGTGTCTGCACCTaGCGGGCATGCAAAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLSCVCT*RACKRS Trigger: AGACCTTTTGCATGCCCGGCAGGTGCAGACACACGA...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR TCA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCCTTTGTTTCCCACGATaGAGATGGGGGCTTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVLCFPR*RWGLFH Trigger: ATGGAAAAGCCCCCATCTTCATCGTGGGAAACAAAG...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | GGAAAGGGCCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCTGCACCTGCCGGGCATaGAAAAGGTCTCCTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: GKGQSLWLHKCLVVIIATCTCRA*KRSPLF Trigger: AAACAAAGGAGACCTTTTGCATGCCCGGCAGGTGCA...GGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGGCCCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR GCA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCGTCTCGAATACAGTTTaGCTGTGTTGGGTTCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVVSNTV*LCWVRS Trigger: ACTACGAACCCAACACAGGCAAACTGTATTCGAGAC...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CCA 90 bp | GCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGCTGGCCCAGTGCACACTTTTaGTCAGAGAATCCACCATTT | + |
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Preference number: 4 (lower is better) Translates to: AAQMSSSNNSNPPVYLSWPSAHF*SENPPF Trigger: AAATGGTGGATTCTCTGACCAAAAGTGTGCACTGGG...CCAGCTCAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR TCA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGCGAGTCTGTGCACCTTaGTCACTTCTTTGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLRVCAP*SLLCRD Trigger: ATCTCTGCAAAGAAGTGATCAAGGTGCACAGACTCG...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CCA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGTCTTTGCAGAGATGTTaGAACACATCACAGACGTCT | + |
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Preference number: 4 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLSLQRC*NTSQTS Trigger: AGACGTCTGTGATGTGTTCCAACATCTCTGCAAAGA...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS TCA 90 bp | CCTCTGCCCAGTGCACACTTTTGGTCAGAGAATCCACCATTTGACTaGGGCTGTCTTGGGCCTGAATGCCTCCCGGAGTGTCCTGGATCT | + |
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Preference number: 5 (lower is better) Translates to: PLPSAHFWSENPPFD*GCLGPECLPECPGS Trigger: AGATCCAGGACACTCCGGGAGGCATTCAGGCCCAAGACAGCCTCAGTCAAATGGTGGATTCTCTGACCAAAAGTGTGCACTGGGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | GCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGCTGGCCCAGCACGGCCAGCTaGATGTCCTTGGGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AAQMSSSNNSNPPVYLSWPSTAS*MSLGRR Trigger: CCTCCTGCCCAAGGACATCAAGCTGGCCGTGCTGGG...CCAGCTCAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTTCAGGTCCTGCATGTaGGGGGATCGAGGCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVFRSCM*GDRGRG Trigger: TCCCCGGCCTCGATCCCCCAACATGCAGGACCTGAA...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCGAGGACGCTTTCGCTTaGGAGGACAGGGCCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVEDAFA*EDRACL Trigger: CAGGCAGGCCCTGTCCTCCAAAGCGAAAGCGTCCTC...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS TCA 90 bp | CGAGTCTCGAATACAGTTTGCCTGTGTTGGGTTCGTAGTCGCCGATaGATCTCTTGGTCAAGAAGCGCACAATCATTGCGCTCTTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RVSNTVCLCWVRSRR*ISWSRSAQSLRSCP Trigger: TGGGCAAGAGCGCAATGATTGTGCGCTTCTTGACCAAGAGATTCATCGGCGACTACGAACCCAACACAGGCAAACTGTATTCGAGACTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGGGCCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCTTGACTGAGGCTGTCTaGGGCCTGAATGCCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: GKGQSLWLHKCLVVIIATLTEAV*GLNASR Trigger: CCGGGAGGCATTCAGGCCCAAGACAGCCTCAGTCAA...GGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGGCCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS CCA 90 bp | TTCCATCAGGGTGGACCTTCCGGATGTGCTGGTAAAGGGGCCGGATaGATTGGTAGCTCTCATAGTCTGTTATGGAATAAACCAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: FHQGGPSGCAGKGAG*IGSSHSLLWNKPAE Trigger: TTCTGCTGGTTTATTCCATAACAGACTATGAGAGCTACCAATCCATCCGGCCCCTTTACCAGCACATCCGGAAGGTCCACCCTGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | GCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGAGCTGGAAGGGGCCGGATGGATaGGTAGCTCTCATAGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: AAQMSSSNNSNPPVYLSWKGPDG*VALIVC Trigger: ACAGACTATGAGAGCTACCAATCCATCCGGCCCCTT...CCAGCTCAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCCCGAGTCTGTGCACCTaGATCACTTCTTTGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVPSLCT*ITSLQR Trigger: TCTCTGCAAAGAAGTGATCAAGGTGCACAGACTCGG...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS GCA 90 bp | GTAGCTCTCATAGTCTGTTATGGAATAAACCAGCAGAAAGCCCTCTaGCCAGTGCACACTTTTGGTCAGAGAATCCACCATTTGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: VALIVCYGINQQKAL*PVHTFGQRIHHLTE Trigger: CTCAGTCAAATGGTGGATTCTCTGACCAAAAGTGTGCACTGGGCAGAGGGCTTTCTGCTGGTTTATTCCATAACAGACTATGAGAGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGCAGAGAATCCACCATTaGACTGAGGCTGTCTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLQRIHH*TEAVLG Trigger: GCCCAAGACAGCCTCAGTCAAATGGTGGATTCTCTG...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | TTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTATCTGTCGCCGATGAATCTCTaGGTCAAGAAGCGCACAATC | + |
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Preference number: 5 (lower is better) Translates to: FVAAQMSSSNNSNPPVYLSPMNL*VKKRTI Trigger: GATTGTGCGCTTCTTGACCAAGAGATTCATCGGCGA...CAGATAGACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCCGCCAGTCTGCAAAAGGTCTCCTTaGTTTCCCACGATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: PVFVAAQMSSSNNSNPPVCKRSP*FPTMKM Trigger: CATCTTCATCGTGGGAAACAAAGGAGACCTTTTGCA...GACTGGCGGGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGGGCCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCTTCTTTGCAGAGATGTaGGAACACATCACAGACGTC | + |
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Preference number: 5 (lower is better) Translates to: GKGQSLWLHKCLVVIIATFFAEM*EHITDV Trigger: GACGTCTGTGATGTGTTCCAACATCTCTGCAAAGAA...GGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGGCCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGGGCCAGTCTTTGTGGCTGCACAAATGTCTAGTAGTAATAATAGCAACCACCTTGATCACTTCTTaGCAGAGATGTTGGAACACA | + |
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Preference number: 5 (lower is better) Translates to: GKGQSLWLHKCLVVIIATTLITS*QRCWNT Trigger: TGTGTTCCAACATCTCTGCAAAGAAGTGATCAAGGT...GGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGGCCCTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS TCA 72 bp | ATTTCAAGGAAGAGACTGCCCAGCTCATTAGCTAGCTaGAGGCCTTCGTGTGTCTGCACCTGCCGGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: ISRKRLPSSLAS*RPSCVCTCRAC Trigger: GCATGCCCGGCAGGTGCAGACACACGAAGGCCTTCAGCTAGCTAATGAGCTGGGCAGTCTCTTCCTTGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS GCA 72 bp | ATGACGGATGCCCTCCTCCGTTCCCCACCGAGTCTGTaGACCTTGATCACTTCTTTGCAGAGATGTTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: MTDALLRSPPSL*TLITSLQRCWN Trigger: GTTCCAACATCTCTGCAAAGAAGTGATCAAGGTGCACAGACTCGGTGGGGAACGGAGGAGGGCATCCGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS CAA 90 bp | ATCAGGGTGGACCTTCCGGATGTGCTGGTAAAGGGGCCGGATGGATaGGTAGCTCTCATAGTCTGTTATGGAATAAACCAGCAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: IRVDLPDVLVKGPDG*VALIVCYGINQQKA Trigger: GGCTTTCTGCTGGTTTATTCCATAACAGACTATGAGAGCTACCAATCCATCCGGCCCCTTTACCAGCACATCCGGAAGGTCCACCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS CCA 72 bp | GGTGGACCTTCCGGATGTGCTGGTAAAGGGGCCGGATaGATTGGTAGCTCTCATAGTCTGTTATGGAATAAA | + |
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Preference number: 6 (lower is better) Translates to: GGPSGCAGKGAG*IGSSHSLLWNK Trigger: TTTATTCCATAACAGACTATGAGAGCTACCAATCCATCCGGCCCCTTTACCAGCACATCCGGAAGGTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS CAA 72 bp | GACCTTCCGGATGTGCTGGTAAAGGGGCCGGATGGATaGGTAGCTCTCATAGTCTGTTATGGAATAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: DLPDVLVKGPDG*VALIVCYGINQ Trigger: CTGGTTTATTCCATAACAGACTATGAGAGCTACCAATCCATCCGGCCCCTTTACCAGCACATCCGGAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS TCA 72 bp | AATACAGTTTGCCTGTGTTGGGTTCGTAGTCGCCGATaGATCTCTTGGTCAAGAAGCGCACAATCATTGCGC | + |
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Preference number: 6 (lower is better) Translates to: NTVCLCWVRSRR*ISWSRSAQSLR Trigger: GCGCAATGATTGTGCGCTTCTTGACCAAGAGATTCATCGGCGACTACGAACCCAACACAGGCAAACTGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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| CDS GCA 72 bp | ATAGTCTGTTATGGAATAAACCAGCAGAAAGCCCTCTaGCCAGTGCACACTTTTGGTCAGAGAATCCACCAT | + |
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Preference number: 6 (lower is better) Translates to: IVCYGINQQKAL*PVHTFGQRIHH Trigger: ATGGTGGATTCTCTGACCAAAAGTGTGCACTGGGCAGAGGGCTTTCTGCTGGTTTATTCCATAACAGACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031646.8 |
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