Pregenerated sensors for RASL10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020684Ensembl transcript IDs: ENSMUST00000021022.10, ENSMUST00000108140.10, ENSMUST00000164425.2, ENSMUST00000175848.8
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGAGGCTGGCCCCGCCCTGCCCTGCCTTTCGCTGGGACAGTGCTaGTGCAGGGCGCACGCGGCGTCACATGATGGCGCAGCGGTTGCG | + |
|
Preference number: 1 (lower is better) Translates to: REAGPALPCLSLGQC*CRAHAASHDGAAVA Trigger: CGCAACCGCTGCGCCATCATGTGACGCCGCGTGCGCCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCCAGCCTCCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 90 bp | CCGCGGGAGGCTGGCCCCGCCCTGCCCTGCCTTTCGCTGGGACAGTaGTGCTGCAGGGCGCACGCGGCGTCACATGATGGCGCAGCGGTT | + |
|
Preference number: 1 (lower is better) Translates to: PREAGPALPCLSLGQ*CCRAHAASHDGAAV Trigger: AACCGCTGCGCCATCATGTGACGCCGCGTGCGCCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCCAGCCTCCCGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | GCCCGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTaGTGTCCCGCGGGAGGCTGGCCCCGCCCTGCCCTGCCTTTCGCT | + |
|
Preference number: 1 (lower is better) Translates to: ARSPEFSSGGFLLWP*CPAGGWPRPALPFA Trigger: AGCGAAAGGCAGGGCAGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCGGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | CTTCAGGCCCGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTaGCCCTGGTGTCCCGCGGGAGGCTGGCCCCGCCCTGCCCTGCCT | + |
|
Preference number: 1 (lower is better) Translates to: LQARSPEFSSGGFLL*PWCPAGGWPRPALP Trigger: AGGCAGGGCAGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCGGGCCTGAAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | TCCTCCGGGGGTTTCCTGCTCTGGCCCTGGTGTCCCGCGGGAGGCTaGCCCCGCCCTGCCCTGCCTTTCGCTGGGACAGTGCTGCTGCAG | + |
|
Preference number: 1 (lower is better) Translates to: SSGGFLLWPWCPAGG*PRPALPFAGTVLLQ Trigger: CTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | ACGCGGCGTCACATGATGGCGCAGCGGTTGCGGCGCAGCGCTCCCTaGAAGCGCAGGGCAGCGTGCACGTGTTTGCAGCGGGCGCAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: TRRHMMAQRLRRSAP*KRRAACTCLQRAQP Trigger: GGGCTGCGCCCGCTGCAAACACGTGCACGCTGCCCTGCGCTTCCAGGGAGCGCTGCGCCGCAACCGCTGCGCCATCATGTGACGCCGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 90 bp | GCGCAGCGGTTGCGGCGCAGCGCTCCCTGGAAGCGCAGGGCAGCGTaGACGTGTTTGCAGCGGGCGCAGCCCACACTCTTGAGCAGCTCG | + |
|
Preference number: 1 (lower is better) Translates to: AQRLRRSAPWKRRAA*TCLQRAQPTLLSSS Trigger: CGAGCTGCTCAAGAGTGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGCCCTGCGCTTCCAGGGAGCGCTGCGCCGCAACCGCTGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 90 bp | CGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCCTTGGGACACTTaGATCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: RTSALGPLGFGPWDT*ISLPFAGGAAGEKA Trigger: GGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | GACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCCTTaGGACACTTGCATCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGG | + |
|
Preference number: 1 (lower is better) Translates to: DGCRTSALGPLGFGP*DTCISLPFAGGAAG Trigger: CCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR TCA 90 bp | GCAGGGAGGTCTCCCTGGATGAGGGAGAGCTCAGCCTTCTCTCCCTaGCGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: AGRSPWMRESSAFSP*RLSDLSPRTPWLRS Trigger: GGACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAGGCTGAGCTCTCCCTCATCCAGGGAGACCTCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 90 bp | CGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTGCCGGTGGCGCTaGCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGA | + |
|
Preference number: 1 (lower is better) Translates to: RSLGHLHLSALCRWR*RGEGLASKSCQDPR Trigger: TCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | GCCGCACTTCCAGGTCTTGCGCACCAAGTGCGACACGTTCCAGCGTaGAATCACGCGTCCGCGTTGCAGGTCGCGCTTGTTGCCCACGAT | + |
|
Preference number: 1 (lower is better) Translates to: AALPGLAHQVRHVPA*NHASALQVALVAHD Trigger: ATCGTGGGCAACAAGCGCGACCTGCAACGCGGACGCGTGATTCCACGCTGGAACGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | TGGCTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTGCCGGTaGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGAT | + |
|
Preference number: 1 (lower is better) Translates to: WLRSLGHLHLSALCR*RCRGEGLASKSCQD Trigger: ATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR TCA 90 bp | GCAGGACAGCAAGGACTAGAACCCAGAATGCTGGGCTGTCCAAAGTaGGGGCTGCTGTTGTACTGCAGTGCCCCCTGCTGGGTAGAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: AGQQGLEPRMLGCPK*GLLLYCSAPCWVEG Trigger: TCCCTCTACCCAGCAGGGGGCACTGCAGTACAACAGCAGCCCTCACTTTGGACAGCCCAGCATTCTGGGTTCTAGTCCTTGCTGTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 90 bp | CCTCCCCATCACCTCTCTGGGTACCTGATTTCCTGGTCTGTGCACTaGAGCCTTGGCAAAGGCTATGTACCCCTGTGTACAGGCGTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: PPHHLSGYLISWSVH*SLGKGYVPLCTGVL Trigger: TAGGACGCCTGTACACAGGGGTACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAGAGGTGATGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | CCAATAACAGCTCAGTGGGTGTCACACACACTTCCAGACCCTGCATaGGAAACCCTGGTTGGGGAGGGGAAGGACGGAGACTCAGAATGG | + |
|
Preference number: 1 (lower is better) Translates to: PITAQWVSHTLPDPA*ETLVGEGKDGDSEW Trigger: CCATTCTGAGTCTCCGTCCTTCCCCTCCCCAACCAGGGTTTCCCATGCAGGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTTATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 90 bp | ACTTCCAATAACAGCTCAGTGGGTGTCACACACACTTCCAGACCCTaGATGGGAAACCCTGGTTGGGGAGGGGAAGGACGGAGACTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: TSNNSSVGVTHTSRP*MGNPGWGGEGRRLR Trigger: TCTGAGTCTCCGTCCTTCCCCTCCCCAACCAGGGTTTCCCATGCAGGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTTATTGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | GACAGACATTGGAAAGAGGGACATGGGGTAAAGACAGATACACTGTaGAGAAGATGGGCAGGGGCCTGGCCAAGACAGCACCTCCTCACC | + |
|
Preference number: 1 (lower is better) Translates to: DRHWKEGHGVKTDTL*RRWAGAWPRQHLLT Trigger: GGTGAGGAGGTGCTGTCTTGGCCAGGCCCCTGCCCATCTTCTCCACAGTGTATCTGTCTTTACCCCATGTCCCTCTTTCCAATGTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | TCACCTCTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTaGCAAAGGCTATGTACCCCTGTGTACAGGCGTCCTATGTACCCC | + |
|
Preference number: 1 (lower is better) Translates to: SPLWVPDFLVCALQP*QRLCTPVYRRPMYP Trigger: GGGGTACATAGGACGCCTGTACACAGGGGTACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAGAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR TCA 90 bp | AGTGTTGGGATAAGGGGTCAGTCAGATCCTGAAGGCCTCCACCTATaGGTGGGGATGCACACCTGTCTTTCCCAGGCACAACTCCCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: SVGIRGQSDPEGLHL*VGMHTCLSQAQLPH Trigger: ATGAGGGAGTTGTGCCTGGGAAAGACAGGTGTGCATCCCCACTCATAGGTGGAGGCCTTCAGGATCTGACTGACCCCTTATCCCAACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 90 bp | AGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGAGGGACATaGGGTAAAGACAGATACACTGTGGAGAAGATGGGCAGGGGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: RTGRHLRGQTLERGT*GKDRYTVEKMGRGL Trigger: CAGGCCCCTGCCCATCTTCTCCACAGTGTATCTGTCTTTACCCCATGTCCCTCTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR TCA 90 bp | GCAGGAGATAACAGAGAAGTGGGACCTAGCATCAAGGAGAGAAAATaGTCCTTTGAGAGGTTTCCTCTCCACACCGTCAAACAAAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: AGDNREVGPSIKERK*SFERFPLHTVKQNK Trigger: TTTGTTTTGTTTGACGGTGTGGAGAGGAAACCTCTCAAAGGATCATTTTCTCTCCTTGATGCTAGGTCCCACTTCTCTGTTATCTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGCCCGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTGGTGTTGGCCCACAGGTTGTaGCCCCTCCTGGGGCCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SGPEPRVLLRGFPALALVLAHRL*PLLGPG Trigger: GCCCGGCCCCAGGAGGGGCCACAACCTGTGGGCCAA...CACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCGGGCCTGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CAA 90 bp | TTGCGGCGCAGCGCTCCCTGGAAGCGCAGGGCAGCGTGCACGTGTTaGCAGCGGGCGCAGCCCACACTCTTGAGCAGCTCGCTGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LRRSAPWKRRAACTC*QRAQPTLLSSSLKS Trigger: GCTCTTCAGCGAGCTGCTCAAGAGTGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGCCCTGCGCTTCCAGGGAGCGCTGCGCCGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCTCTGCCCTTTGCCGGTaGCGCTGCCGGGGAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSLTAVGPQPSDPLASVSALCR*RCRGEG Trigger: GCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGA...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CAA 90 bp | TCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCCTTGGGACACTaGCATCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SDLSPRTPWLRSLGH*HLSALCRWRCRGEG Trigger: GCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGCATCTCTCTGCCCTTTaGCGGTGGCGCTGCCGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RCRGEGLASKSCQDPRQGHLSAL*RWRCRG Trigger: TCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATG...CCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGGCCTGGCCAAGACAGCACCTCCTCACCCCACCCTCCATTTCACAAGCTGGGGGTTTCCTGCTCTaGCCCTGGTGTCCCGCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: AGAWPRQHLLTPPSISQAGGFLL*PWCPAG Trigger: TCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCC...AGCTTGTGAAATGGAGGGTGGGGTGAGGAGGTGCTGTCTTGGCCAGGCCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGGGAGGACTGGGGAGTaGCGGGGAGACTCCCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LPVALPGRRPGIKKLPGSGRTGE*RGDSLS Trigger: TGAGAGGGAGTCTCCCCGCCACTCCCCAGTCCTCCC...GGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGTCTGCCCTTTGCCGGTaGCGCTGCCGGGGAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SLCPLPVALPGRRPGIKKSALCR*RCRGEG Trigger: GCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGA...CTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTTACCCTCCCAGCCACTCTGAAGTGTGGGGGAGGGGAGCCACCGCCTCTGAGCCCTCGGACCCCTTaGCTTCGGTCCTTGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: LLTLPATLKCGGGEPPPLSPRTP*LRSLGH Trigger: GTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCT...CAGAGGCGGTGGCTCCCCTCCCCCACACTTCAGAGTGGCTGGGAGGGTAAGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCAGCCCTCGGACCCCTTaGCTTCGGTCCTTGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: LLSLTAVGPQPSDPLASVSPRTP*LRSLGH Trigger: GTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCT...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTACACTACAGCACTGAAGGTGACTGACCCAGGGAGACCCAGGTGGGAGGGGCCTCCGGGGGTTTCCTaGTCTGGCCCTGGTGTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: HYTTALKVTDPGRPRWEGPPGVS*SGPGVP Trigger: CGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGG...CCCCTCCCACCTGGGTCTCCCTGGGTCAGTCACCTTCAGTGCTGTAGTGTAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTTCAGGCCCGGAGTGCCCTGCCTTTCGCTaGGACAGTGCTGCTGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLILVGEVCGCRGASGPECPAFR*DSAAAG Trigger: CCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCA...CTCCGGGCCTGAAGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGGGGAGGACTGGGGAGTaGCGGGGAGACTCCCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLCPLPVALPGRRPGIKKGRTGE*RGDSLS Trigger: TGAGAGGGAGTCTCCCCGCCACTCCCCAGTCCTCCC...CTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTTCAGGCCCGGAGAGATGGGCAGGGGCCTaGCCAAGACAGCACCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PLILVGEVCGCRGASGPERWAGA*PRQHLL Trigger: GAGGAGGTGCTGTCTTGGCCAGGCCCCTGCCCATCT...CTCCGGGCCTGAAGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CAA 90 bp | AGCCTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTaGGCTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLTAVGPQPSDP*ASVLGTLASLCPLP Trigger: CGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGAGCAGGGAGAAACACCGGAAGGTAGACAGGACAAATGAGGACTGGCAGGGCCCCGCCCTGCCCTaGCTTTCGCTGGGACAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LGSREKHRKVDRTNEDWQGPALP*LSLGQC Trigger: GCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCC...CTGCCAGTCCTCATTTGTCCTGTCTACCTTCCGGTGTTTCTCCCTGCTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCACACTTGCATCTCTCTaGCCTTTGCCGGTGGCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSLTAVGPQPSDPLASVTLASL*PLPVAL Trigger: CAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGT...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGAGCCCTCGGACCCCTTaGCTTCGGTCCTTGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: SLCPLPVALPGRRPGIKKSPRTP*LRSLGH Trigger: GTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCT...CTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGGCCTGGCCAAGACAGCACCTCCTCACCCCACCCTCCATTTCACAAGCTAGGGGACGGACAAAATaGGAGCCCTGTGAGCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: AGAWPRQHLLTPPSISQARGRTK*EPCERS Trigger: GCTCCGCTCACAGGGCTCTCATTTTGTCCGTCCCCT...AGCTTGTGAAATGGAGGGTGGGGTGAGGAGGTGCTGTCTTGGCCAGGCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGTGCCCCCTGCTGGGTAGAGGGAGTGAGATTCAGTAGGGAAGCAATAGAGGGCCCCGCCCTGCCCTaGCTTTCGCTGGGACAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: CSAPCWVEGVRFSREAIEGPALP*LSLGQC Trigger: GCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCC...CTCTATTGCTTCCCTACTGAATCTCACTCCCTCTACCCAGCAGGGGGCACTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCAGATGGGCAGGGGCCTaGCCAAGACAGCACCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AEGSASGTFFGRGRGHGTRWAGA*PRQHLL Trigger: GAGGAGGTGCTGTCTTGGCCAGGCCCCTGCCCATCT...GGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTTCCGTCTCTGGGGGCTGCTaGGCAGGGAGGTCTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SASGTFFGRGRGHGTTSSVSGGC*AGRSPW Trigger: CCAGGGAGACCTCCCTGCCCAGCAGCCCCCAGAGAC...GGAAGAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGGCCTGGCCAAGACAGCACCTCCTCACCCCACCCTCCATTTCACAAGCTCGACACGTTCCAGCGTaGAATCACGCGTCCGCGTTG | + |
|
Preference number: 2 (lower is better) Translates to: AGAWPRQHLLTPPSISQARHVPA*NHASAL Trigger: CAACGCGGACGCGTGATTCCACGCTGGAACGTGTCG...AGCTTGTGAAATGGAGGGTGGGGTGAGGAGGTGCTGTCTTGGCCAGGCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGTGCCCCCTGCTGGGTAGAGGGAGTGAGATTCAGTAGGGAAGCAATAGAGCCTCCGGGGGTTTCCTaGTCTGGCCCTGGTGTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: CSAPCWVEGVRFSREAIEPPGVS*SGPGVP Trigger: CGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGG...CTCTATTGCTTCCCTACTGAATCTCACTCCCTCTACCCAGCAGGGGGCACTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCCCCTGTGAGCGGAGCTaGGGAGCAGGGAGAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: GFSLRNFLWPGQGTWNHFPCERS*GAGRNT Trigger: GGTGTTTCTCCCTGCTCCCCAGCTCCGCTCACAGGG...GAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACATCTCTCTGCCCTTTaGCGGTGGCGCTGCCGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SPNVVAAHPSAGDNREVGHLSAL*RWRCRG Trigger: TCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATG...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGAAGAGCAGCAGGATGTaGCAGTTGTACTTGGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: RCRGEGLASKSCQDPRQGKSSRM*QLYLAE Trigger: CTCGGCCAAGTACAACTGGCACATCCTGCTGCTCTT...CCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTGGGGGTTTCCTGCTCTaGCCCTGGTGTCCCGCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LWVPDFLVCALQPWQRLCGGFLL*PWCPAG Trigger: TCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCC...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACCCTGTGAGCGGAGCTaGGGAGCAGGGAGAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: SPNVVAAHPSAGDNREVGPCERS*GAGRNT Trigger: GGTGTTTCTCCCTGCTCCCCAGCTCCGCTCACAGGG...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAATCATAGATTCCCTCCCACACGGGAACACCATAAATTCCCCATCCCACCCCCATCTCTCTGCCCTTTaGCGGTGGCGCTGCCGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RIIDSLPHGNTINSPSHPHLSAL*RWRCRG Trigger: TCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATG...GGGGTGGGATGGGGAATTTATGGTGTTCCCGTGTGGGAGGGAATCTATGATTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTTCCACACTTGCATCTCTCTaGCCTTTGCCGGTGGCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SASGTFFGRGRGHGTTSSTLASL*PLPVAL Trigger: CAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGT...GGAAGAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGATGGAAGGTAGGTGGTTaGGTCTCTGGGGGCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPNVVAAHPSAGDNREVGWKVGG*VSGGCW Trigger: CCAGCAGCCCCCAGAGACGCAACCACCTACCTTCCA...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGAGCAGGGAGAAACACCGGAAGGTAGACAGGACAAATGAGGACTGGCAGGTCTTGCGCACCAAGTaGGACACGTTCCAGCGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGSREKHRKVDRTNEDWQVLRTK*DTFQRG Trigger: TCCACGCTGGAACGTGTCGCACTTGGTGCGCAAGAC...CTGCCAGTCCTCATTTGTCCTGTCTACCTTCCGGTGTTTCTCCCTGCTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTTCCCGCACTTCCAGGTCTTaGGCACCAAGTGCGACACGT | + |
|
Preference number: 2 (lower is better) Translates to: SASGTFFGRGRGHGTTSSRTSRS*APSATR Trigger: ACGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCG...GGAAGAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTTGCCCTGCCTTTCGCTaGGACAGTGCTGCTGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LWVPDFLVCALQPWQRLCCPAFR*DSAAAG Trigger: CCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCA...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTAGAACCCAGAATGCTGGGCTGTCCAAAGTGAGGGCTGCTGTTGTACTGCACAAGCTCACCCCTTaGCCCACAGGTTGTGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RTRTQNAGLSKVRAAVVLHKLTP*PTGCGP Trigger: GGGGCCACAACCTGTGGGCCAAGGGGTGAGCTTGTG...CAGTACAACAGCAGCCCTCACTTTGGACAGCCCAGCATTCTGGGTTCTAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTTCCACACTGTGGAGAAGATaGGCAGGGGCCTGGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SASGTFFGRGRGHGTTSSTLWRR*AGAWPR Trigger: TCTTGGCCAGGCCCCTGCCCATCTTCTCCACAGTGT...GGAAGAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGAAGGTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTTGCCCTGCCTTTCGCTaGGACAGTGCTGCTGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RKVDRTNEDWQTPERTDICPAFR*DSAAAG Trigger: CCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCA...AATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTACCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGGACGGACAAAAACACTGTGGAGAAGATaGGCAGGGGCCTGGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RRPGIKKLPGSATRGRTKTLWRR*AGAWPR Trigger: TCTTGGCCAGGCCCCTGCCCATCTTCTCCACAGTGT...TTTTGTCCGTCCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTAGGCTGGAAGGTAGGTaGTTGCGTCTCTGGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LWVPDFLVCALQPWQRLCRLEGR*LRLWGL Trigger: CAGCCCCCAGAGACGCAACCACCTACCTTCCAGCCT...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTCCGGGGCAGGGGACATaGAACCACTTCTTCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LWVPDFLVCALQPWQRLCPGQGT*NHFFLP Trigger: AGGGAGGAAGAAGTGGTTCCATGTCCCCTGCCCCGG...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGTGCCCCCTGCTGGGTAGAGGGAGTGAGATTCAGTAGGGAAGCAATAGAGCCTTATGCTCCCAACTaGACCAGGGCTGAGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: CSAPCWVEGVRFSREAIEPYAPN*TRAEAE Trigger: CTCAGCCTCAGCCCTGGTCCAGTTGGGAGCATAAGG...CTCTATTGCTTCCCTACTGAATCTCACTCCCTCTACCCAGCAGGGGGCACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTGCCCCTACAGAGACTaGTCAAAACAACCTGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: GFSLRNFLWPGQGTWNHFCPYRD*SKQPET Trigger: GGTCTCAGGTTGTTTTGATCAGTCTCTGTAGGGGCA...GAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTAATCTGACTTCCAATAACAGCTCAGTGGGTGTCACACACACTTCCAGACCCCCCTCCCAGCCACTCTaGAGTGTGGGGGAGGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FNLTSNNSSVGVTHTSRPPSQPL*SVGEGS Trigger: GCTCCCCTCCCCCACACTTCAGAGTGGCTGGGAGGG...GGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTTATTGGAAGTCAGATTAAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATCTGACTTCCAATAACAGCTCAGTGGGTGTCACACACACTTCCAGACCCCCTCCGGGGGTTTCCTaGTCTGGCCCTGGTGTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: FNLTSNNSSVGVTHTSRPPPGVS*SGPGVP Trigger: CGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGG...GGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTTATTGGAAGTCAGATTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGATCACGCGTCCGCGTTaGAGGTCGCGCTTGTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VDRTNEDWQTPERTDIGKITRPR*RSRLLP Trigger: GGGCAACAAGCGCGACCTGCAACGCGGACGCGTGAT...CTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCCCGAGCAATCCCTCAGGCCATTCCTGGAATCTCCATTATTATTATTTCTTTGGCCCACAGGTTGTaGCCCCTCCTGGGGCCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPRAIPQAIPGISIIIISLAHRL*PLLGPG Trigger: GCCCGGCCCCAGGAGGGGCCACAACCTGTGGGCCAA...AGAAATAATAATAATGGAGATTCCAGGAATGGCCTGAGGGATTGCTCGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGAGGGACATGGGGACACTGTGGAGAAGATaGGCAGGGGCCTGGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NEDWQTPERTDIGKRDMGTLWRR*AGAWPR Trigger: TCTTGGCCAGGCCCCTGCCCATCTTCTCCACAGTGT...CCCCATGTCCCTCTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCTTGGAAAGAGGGACATaGGGTAAAGACAGATACACT | + |
|
Preference number: 2 (lower is better) Translates to: LPVALPGRRPGIKKLPGSLERGT*GKDRYT Trigger: AGTGTATCTGTCTTTACCCCATGTCCCTCTTTCCAA...GGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTGGCTCTGCCCCTACAGAGACTGATCAAAACAACCTGAGACCTGATGGAGCAGGGAGGTCTCCCTaGATGAGGGAGAGCTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FPGSAPTETDQNNLRPDGAGRSP*MRESSA Trigger: GGCTGAGCTCTCCCTCATCCAGGGAGACCTCCCTGC...TCCATCAGGTCTCAGGTTGTTTTGATCAGTCTCTGTAGGGGCAGAGCCAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTAATCTGACTTCCAATAACAGCTCAGTGGGTGTCACACACACTTCCAGACCCGTCTCTGGGGGCTGCTaGGCAGGGAGGTCTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FNLTSNNSSVGVTHTSRPVSGGC*AGRSPW Trigger: CCAGGGAGACCTCCCTGCCCAGCAGCCCCCAGAGAC...GGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTTATTGGAAGTCAGATTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCCCGAGCAATCCCTCAGGCCATTCCTGGAATCTCCATTATTATTATTTCTGGGAGGACTGGGGAGTaGCGGGGAGACTCCCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SPRAIPQAIPGISIIIISGRTGE*RGDSLS Trigger: TGAGAGGGAGTCTCCCCGCCACTCCCCAGTCCTCCC...AGAAATAATAATAATGGAGATTCCAGGAATGGCCTGAGGGATTGCTCGGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTAGAACCCAGAATGCTGGGCTGTCCAAAGTGAGGGCTGCTGTTGTACTGTCCCCATCACCTCTCTaGGTACCTGATTTCCTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RTRTQNAGLSKVRAAVVLSPSPL*VPDFLV Trigger: GACCAGGAAATCAGGTACCCAGAGAGGTGATGGGGA...CAGTACAACAGCAGCCCTCACTTTGGACAGCCCAGCATTCTGGGTTCTAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCCCGAGCAATCCCTCAGGCCATTCCTGGAATCTCCATTATTATTATTTCTAGATGGGCAGGGGCCTaGCCAAGACAGCACCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SPRAIPQAIPGISIIIISRWAGA*PRQHLL Trigger: GAGGAGGTGCTGTCTTGGCCAGGCCCCTGCCCATCT...AGAAATAATAATAATGGAGATTCCAGGAATGGCCTGAGGGATTGCTCGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCCCGAGCAATCCCTCAGGCCATTCCTGGAATCTCCATTATTATTATTTCTGCAGGGAGGTCTCCCTaGATGAGGGAGAGCTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SPRAIPQAIPGISIIIISAGRSP*MRESSA Trigger: GGCTGAGCTCTCCCTCATCCAGGGAGACCTCCCTGC...AGAAATAATAATAATGGAGATTCCAGGAATGGCCTGAGGGATTGCTCGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACCTGAGAAAATGATCCTTTaGGAGGTTTCCTCTCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: PNVVAAHPSAGDNREVGPEKMIL*EVSSPH Trigger: GTGTGGAGAGGAAACCTCTCAAAGGATCATTTTCTC...AGGTCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTAAACAACCTGAGACCTaGTGGAGGCAGAATCTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LWVPDFLVCALQPWQRLCKQPET*WRQNLR Trigger: CCTAAGATTCTGCCTCCATCAGGTCTCAGGTTGTTT...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACCTTTGGAAAGAGGGACATaGGGTAAAGACAGATACACT | + |
|
Preference number: 2 (lower is better) Translates to: PNVVAAHPSAGDNREVGPLERGT*GKDRYT Trigger: AGTGTATCTGTCTTTACCCCATGTCCCTCTTTCCAA...AGGTCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCATAGATTCCCTCCCACACGGGAACACCATAAATTCCCCATCCCACCCCTTGGAAAGAGGGACATaGGGTAAAGACAGATACACT | + |
|
Preference number: 2 (lower is better) Translates to: RIIDSLPHGNTINSPSHPLERGT*GKDRYT Trigger: AGTGTATCTGTCTTTACCCCATGTCCCTCTTTCCAA...GGGGTGGGATGGGGAATTTATGGTGTTCCCGTGTGGGAGGGAATCTATGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAATCATAGATTCCCTCCCACACGGGAACACCATAAATTCCCCATCCCACCCCATCAAGGAGAGAAAATaGTCCTTTGAGAGGTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RIIDSLPHGNTINSPSHPIKERK*SFERFP Trigger: AGGAAACCTCTCAAAGGATCATTTTCTCTCCTTGAT...GGGGTGGGATGGGGAATTTATGGTGTTCCCGTGTGGGAGGGAATCTATGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | CTGGCCCTGGTGTCCCGCGGGAGGCTGGCCCCGCCCTaGCCTGCCTTTCGCTGGGACAGTGCTGCTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LALVSRGRLAPP*PAFRWDSAAAG Trigger: CCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | AGGCCCGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTaGTCTGGCCCTGGTGTCCCGCGGGAGGCTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RPGAQSSPPGVS*SGPGVPREAGP Trigger: GGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCGGGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | CCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTaGTGTCCCGCGGGAGGCTGGCCCCGCCCTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PEFSSGGFLLWP*CPAGGWPRPAL Trigger: CAGGGCAGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | CGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTaGCCCTGGTGTCCCGCGGGAGGCTGGCCCCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSPEFSSGGFLL*PWCPAGGWPRP Trigger: AGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR TCA 72 bp | GGGACAGTGCTGCTGCAGGGCGCACGCGGCGTCACATaGTGGCGCAGCGGTTGCGGCGCAGCGCTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTVLLQGARGVT*WRSGCGAALPG Trigger: TCCAGGGAGCGCTGCGCCGCAACCGCTGCGCCATCATGTGACGCCGCGTGCGCCCTGCAGCAGCACTGTCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | CCCGCCCTGCCCTGCCTTTCGCTGGGACAGTGCTGCTaGAGGGCGCACGCGGCGTCACATGATGGCGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: PALPCLSLGQCC*RAHAASHDGAA Trigger: CGCTGCGCCATCATGTGACGCCGCGTGCGCCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | GCTGGCCCCGCCCTGCCCTGCCTTTCGCTGGGACAGTaGTGCTGCAGGGCGCACGCGGCGTCACATGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGPALPCLSLGQ*CCRAHAASHDG Trigger: GCCATCATGTGACGCCGCGTGCGCCCTGCAGCAGCACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | GGTTTCCTGCTCTGGCCCTGGTGTCCCGCGGGAGGCTaGCCCCGCCCTGCCCTGCCTTTCGCTGGGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GFLLWPWCPAGG*PRPALPFAGTV Trigger: CACTGTCCCAGCGAAAGGCAGGGCAGGGCGGGGCCAGCCTCCCGCGGGACACCAGGGCCAGAGCAGGAAACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | TTGCGGCGCAGCGCTCCCTGGAAGCGCAGGGCAGCGTaGACGTGTTTGCAGCGGGCGCAGCCCACACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRRSAPWKRRAA*TCLQRAQPTLL Trigger: CAAGAGTGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGCCCTGCGCTTCCAGGGAGCGCTGCGCCGCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCGCAGCGTGCACGTGTTaGCAGCGGGCGCAGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLSLTAVGPQPSDPLASVAACTC*QRAQPT Trigger: TGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGC...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | GCCCTCGGACCCCTTGGCTTCGGTCCTTGGGACACTTaGATCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALGPLGFGPWDT*ISLPFAGGAAG Trigger: CCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | CTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCTaGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPFAGGAAGEKA*HQKAARIRDKG Trigger: CCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGATCACAAGCTCACCCCTaGGCCCACAGGTTGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RWRCRGEGLASKSCQDPRSQAHP*AHRLWP Trigger: GGGCCACAACCTGTGGGCCAAGGGGTGAGCTTGTGA...TCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGAAATCACGCGTCCGCGTaGCAGGTCGCGCTTGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RWRCRGEGLASKSCQDPRNHASA*QVALVA Trigger: GGCAACAAGCGCGACCTGCAACGCGGACGCGTGATT...TCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR TCA 72 bp | TCTCCCTGGATGAGGGAGAGCTCAGCCTTCTCTCCCTaGCGGCTGTCGGACCTCAGCCCTCGGACCCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPWMRESSAFSP*RLSDLSPRTPW Trigger: CCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAGGCTGAGCTCTCCCTCATCCAGGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | CCCTTGGCTTCGGTCCTTGGGACACTTGCATCTCTCTaGCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLASVLGTLASL*PLPVALPGRRP Trigger: AGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | CGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCCTTaGGACACTTGCATCTCTCTGCCCTTTGCCGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RTSALGPLGFGP*DTCISLPFAGG Trigger: GCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | CTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTaGCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LRSLGHLHLSAL*RWRCRGEGLAS Trigger: TGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | AAGCTCACCCCTTGGCCCACAGGTTGTGGCCCCTCCTaGGGCCGGGCACTACACTACAGCACTGAAGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KLTPWPTGCGPS*GRALHYSTEGD Trigger: GTCACCTTCAGTGCTGTAGTGTAGTGCCCGGCCCCAGGAGGGGCCACAACCTGTGGGCCAAGGGGTGAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACCTCCCTTGGCCCACAGGTaGTGGCCCCTCCTGGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: PNVVAAHPSAGDNREVGPPLAHR*WPLLGP Trigger: CGGCCCCAGGAGGGGCCACAACCTGTGGGCCAAGGG...AGGTCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGCCTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTCGGTCCTTGGGACACTaGCATCTCTCTGCCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSLLSLTAVGPQPSDPLARSLGH*HLSALC Trigger: GCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCG...AGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAGGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCCCTTGGCTTCGGTCCTaGGGACACTTGCATCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLSLTAVGPQPSDPLASVPWLRS*GHLHLS Trigger: AGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGG...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTACACTACAGCACTGAAGGTGACTGACCCAGGGAGACCCAGGTGGGAGGGGCCGCACTTCCAGGTCTaGCGCACCAAGTGCGACACG | + |
|
Preference number: 3 (lower is better) Translates to: HYTTALKVTDPGRPRWEGPHFQV*RTKCDT Trigger: CGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCGG...CCCCTCCCACCTGGGTCTCCCTGGGTCAGTCACCTTCAGTGCTGTAGTGTAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | GGACACTTGCATCTCTCTGCCCTTTGCCGGTGGCGCTaGCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHLHLSALCRWR*RGEGLASKSCQ Trigger: CTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | CCAGGTCTTGCGCACCAAGTGCGACACGTTCCAGCGTaGAATCACGCGTCCGCGTTGCAGGTCGCGCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PGLAHQVRHVPA*NHASALQVALV Trigger: AACAAGCGCGACCTGCAACGCGGACGCGTGATTCCACGCTGGAACGTGTCGCACTTGGTGCGCAAGACCTGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGAAGGTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTCCCTTGGCCCACAGGTaGTGGCCCCTCCTGGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: RKVDRTNEDWQTPERTDIPLAHR*WPLLGP Trigger: CGGCCCCAGGAGGGGCCACAACCTGTGGGCCAAGGG...AATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTACCTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCGGTCCTTGGGACACTaGCATCTCTCTGCCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLCPLPVALPGRRPGIKKRSLGH*HLSALC Trigger: GCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCG...CTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | TGGCCGAGCACTCCACGTAGCCGCACTTCCAGGTCTTaGGCACCAAGTGCGACACGTTCCAGCGTGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: WPSTPRSRTSRS*APSATRSSVES Trigger: TGATTCCACGCTGGAACGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCGGCTACGTGGAGTGCTCGGCCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | AACAGCTCAGTGGGTGTCACACACACTTCCAGACCCTaGATGGGAAACCCTGGTTGGGGAGGGGAAGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: NSSVGVTHTSRP*MGNPGWGGEGR Trigger: CCGTCCTTCCCCTCCCCAACCAGGGTTTCCCATGCAGGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR TCA 72 bp | CAAGGACTAGAACCCAGAATGCTGGGCTGTCCAAAGTaGGGGCTGCTGTTGTACTGCAGTGCCCCCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGLEPRMLGCPK*GLLLYCSAPCW Trigger: CCAGCAGGGGGCACTGCAGTACAACAGCAGCCCTCACTTTGGACAGCCCAGCATTCTGGGTTCTAGTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | GGACATGGGGTAAAGACAGATACACTGTGGAGAAGATaGGCAGGGGCCTGGCCAAGACAGCACCTCCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: GHGVKTDTLWRR*AGAWPRQHLLT Trigger: GGTGAGGAGGTGCTGTCTTGGCCAGGCCCCTGCCCATCTTCTCCACAGTGTATCTGTCTTTACCCCATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | GTACCCCTCTTGACAAAGGGTCCTTATGCTCCCAACTaGACCAGGGCTGAGGCTGAGGGTTCAGCCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPLLTKGPYAPN*TRAEAEGSASG Trigger: TCCTGAGGCTGAACCCTCAGCCTCAGCCCTGGTCCAGTTGGGAGCATAAGGACCCTTTGTCAAGAGGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACCTCGGTCCTTGGGACACTaGCATCTCTCTGCCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PNVVAAHPSAGDNREVGPRSLGH*HLSALC Trigger: GCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCG...AGGTCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGAAGCAGGATGTGCCAGTaGTACTTGGCCGAGCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPNVVAAHPSAGDNREVGSRMCQ*YLAEHS Trigger: GGAGTGCTCGGCCAAGTACAACTGGCACATCCTGCT...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR TCA 72 bp | CTAAATCGGTACAAAACTGACAGTGATCAGCTCCGGTaGCGAGAGGTAGAAACCCGGCCAGGCAGCCGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LNRYKTDSDQLR*REVETRPGSRG Trigger: TCCCCGGCTGCCTGGCCGGGTTTCTACCTCTCGTCACCGGAGCTGATCACTGTCAGTTTTGTACCGATTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGAAAACACTCCCTGATTTTTAATCTGACTTCCAATAACAGCTCAGTGGGTCCCTTGGCCCACAGGTaGTGGCCCCTCCTGGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: EGKHSLIFNLTSNNSSVGPLAHR*WPLLGP Trigger: CGGCCCCAGGAGGGGCCACAACCTGTGGGCCAAGGG...ACCCACTGAGCTGTTATTGGAAGTCAGATTAAAAATCAGGGAGTGTTTTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGGCTCTGCCCCTACAGAGACTGATCAAAACAACCTGAGACCTGATGGAGCGCAGCCCACACTCTaGAGCAGCTCGCTGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FPGSAPTETDQNNLRPDGAQPTL*SSSLKS Trigger: GCTCTTCAGCGAGCTGCTCAAGAGTGTGGGCTGCGC...TCCATCAGGTCTCAGGTTGTTTTGATCAGTCTCTGTAGGGGCAGAGCCAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | TGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTaGCAAAGGCTATGTACCCCTGTGTACAGGCGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WVPDFLVCALQP*QRLCTPVYRRP Trigger: AGGACGCCTGTACACAGGGGTACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | CACCTCTCTGGGTACCTGATTTCCTGGTCTGTGCACTaGAGCCTTGGCAAAGGCTATGTACCCCTGTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: HLSGYLISWSVH*SLGKGYVPLCT Trigger: TGTACACAGGGGTACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR GCA 72 bp | GAGGCTCAGAGAGGGCAAATCGCTAGCCCAAAATTGTaGAGGACAGCAAGGACTAGAACCCAGAATGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EAQRGQIASPKL*RTARTRTQNAG Trigger: CCCAGCATTCTGGGTTCTAGTCCTTGCTGTCCTGCACAATTTTGGGCTAGCGATTTGCCCTCTCTGAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGAGAATCATAGATTCCCTCCCACACGGGAACACCATAAATTCCCCATCCTCACAAGCTCACCCCTaGGCCCACAGGTTGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IERIIDSLPHGNTINSPSSQAHP*AHRLWP Trigger: GGGCCACAACCTGTGGGCCAAGGGGTGAGCTTGTGA...GGATGGGGAATTTATGGTGTTCCCGTGTGGGAGGGAATCTATGATTCTCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCAGAGAAAATGATCCTTaGAGAGGTTTCCTCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GFSLRNFLWPGQGTWNHFRENDP*RGFLST Trigger: TGTGGAGAGGAAACCTCTCAAAGGATCATTTTCTCT...GAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | GAGAAACACCGGAAGGTAGACAGGACAAATGAGGACTaGCAGACACCTGAGAGGACAGACATTGGAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EKHRKVDRTNED*QTPERTDIGKR Trigger: CCTCTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTACCTTCCGGTGTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CCA 72 bp | AGACACCTGAGAGGACAGACATTGGAAAGAGGGACATaGGGTAAAGACAGATACACTGTGGAGAAGATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RHLRGQTLERGT*GKDRYTVEKMG Trigger: GCCCATCTTCTCCACAGTGTATCTGTCTTTACCCCATGTCCCTCTTTCCAATGTCTGTCCTCTCAGGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CAA 72 bp | AGCGCTCCCTGGAAGCGCAGGGCAGCGTGCACGTGTTaGCAGCGGGCGCAGCCCACACTCTTGAGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWKRRAACTC*QRAQPTLLSSS Trigger: CGAGCTGCTCAAGAGTGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGCCCTGCGCTTCCAGGGAGCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| 3UTR CAA 72 bp | AGCCCTCGGACCCCTTGGCTTCGGTCCTTGGGACACTaGCATCTCTCTGCCCTTTGCCGGTGGCGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRTPWLRSLGH*HLSALCRWRCR Trigger: CCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTGGTGTCCCGCGGAAGGCGCTGATGGGTaGGAAGTCCAGGATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPEFSSGGFLLWPWCPAEGADG*EVQDLQ Trigger: CTGCAGATCCTGGACTTCCCACCCATCAGCGCCTTC...CGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CAA 72 bp | GCTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTaGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ASVLGTLASLCP*PVALPGRRPGI Trigger: GATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTTCAGGCCCGGAGCGCTTCGGAGTCCCCTaGAGCAGGCATCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLILVGEVCGCRGASGPERFGVP*SRHLPT Trigger: AGTGGGCAGATGCCTGCTGCAGGGGACTCCGAAGCG...CTCCGGGCCTGAAGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTGGTGGTCTTGCGCACCAAGTaGGACACGTTCCAGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPEPRVLLRGFPALALVVLRTK*DTFQRG Trigger: TCCACGCTGGAACGTGTCGCACTTGGTGCGCAAGAC...CACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCGGGCCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCCGACACGTTCCAGCGTaGAATCACGCGTCCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSLTAVGPQPSDPLASVRHVPA*NHASAL Trigger: CAACGCGGACGCGTGATTCCACGCTGGAACGTGTCG...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR TCA 90 bp | CGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTGGTGTCCCGCGGTCTCCAGGATCTGCTaGCGGATAGTCTTGACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPEFSSGGFLLWPWCPAVSRIC*RIVLTY Trigger: GTACGTCAAGACTATCCGTCAGCAGATCCTGGAGAC...CGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTGCCCTTTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGATCACGCGTCCGCGTTaGAGGTCGCGCTTGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCPLPVALPGRRPGIKKITRPR*RSRLLP Trigger: GGGCAACAAGCGCGACCTGCAACGCGGACGCGTGAT...CTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAAAGGGCAGAGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCGCACGATGGCACTCTTaGCCACACCTCGAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGSASGTFFGRGRGHGTARWHS*PHLEPP Trigger: TGGGGGCTCGAGGTGTGGGCAAGAGTGCCATCGTGC...GGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | CTCGGACCCCTTGGCTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTGCCCGCTTCGGAGTCCCCTaGAGCAGGCATCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGPLGFGPWDTCISLPFARFGVP*SRHLPT Trigger: AGTGGGCAGATGCCTGCTGCAGGGGACTCCGAAGCG...GGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGGCGCACTTCCAGGTCTTaGGCACCAAGTGCGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGEKAWHQKAARIRDKGRTSRS*APSATR Trigger: ACGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCG...CCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTTCCAGAGGCGGCGGGTGGTaGTGGGCACACAGACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SASGTFFGRGRGHGTTSSRGGGW*WAHRPR Trigger: GCGAGGTCTGTGTGCCCACCACCACCCGCCGCCTCT...GGAAGAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGCCCCCTGCTGGGTAGAGGGAGTGAGATTCAGTAGGGAAGCAATAGAGAGAGGCGGCGGGTGGTaGTGGGCACACAGACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSAPCWVEGVRFSREAIERGGGW*WAHRPR Trigger: GCGAGGTCTGTGTGCCCACCACCACCCGCCGCCTCT...CTCTATTGCTTCCCTACTGAATCTCACTCCCTCTACCCAGCAGGGGGCACTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACCTAGAGGCGGCGGGTGGTaGTGGGCACACAGACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVVAAHPSAGDNREVGPRGGGW*WAHRPR Trigger: GCGAGGTCTGTGTGCCCACCACCACCCGCCGCCTCT...AGGTCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCCTCTCACCCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTGGGAAGTCCAGGATCTaGAGGTCGTGCACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSHPLILVGEVCGCRGAGKSRI*RSCTWP Trigger: TGGCCATGTGCACGACCTGCAGATCCTGGACTTCCC...AGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGGGTGAGAGGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCTTCCATCACGCGTCCGCGTTaGAGGTCGCGCTTGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASGTFFGRGRGHGTTSSITRPR*RSRLLP Trigger: GGGCAACAAGCGCGACCTGCAACGCGGACGCGTGAT...GGAAGAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCCTCTCACCCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTCGCACTTCCAGGTCTTaGGCACCAAGTGCGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSHPLILVGEVCGCRGARTSRS*APSATR Trigger: ACGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCG...AGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGGGTGAGAGGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGCCTGGCCAAGACAGCACCTCCTCACCCCACCCTCCATTTCACAAGCTGTCTCCAGGATCTGCTaGCGGATAGTCTTGACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGAWPRQHLLTPPSISQAVSRIC*RIVLTY Trigger: GTACGTCAAGACTATCCGTCAGCAGATCCTGGAGAC...AGCTTGTGAAATGGAGGGTGGGGTGAGGAGGTGCTGTCTTGGCCAGGCCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGGACGGACAAAAGCACGATGGCACTCTTaGCCACACCTCGAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPGIKKLPGSATRGRTKARWHS*PHLEPP Trigger: TGGGGGCTCGAGGTGTGGGCAAGAGTGCCATCGTGC...TTTTGTCCGTCCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGACCCCTTGGCTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTGCCAGAATTGGCGCACGATaGCACTCTTGCCCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLGFGPWDTCISLPFARIGAR*HSCPHL Trigger: GAGGTGTGGGCAAGAGTGCCATCGTGCGCCAATTCT...GGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTTCGGTCGCACACAGACCTCGCTaGACTCGTTGTATAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLSLTAVGPQPSDPLASVAHRPR*TRCIRI Trigger: AATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGC...GACCGAAGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCAGGATCTGCAGGTCGTaGACATGGCCATTCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: AEGSASGTFFGRGRGHGTRICRS*TWPFMT Trigger: GGTCATGAATGGCCATGTGCACGACCTGCAGATCCT...GGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | CTCGGACCCCTTGGCTTCGGTCCTTGGGACACTTGCATCTCTCTGCCCTTTGCCAAGAGCAGCAGGATGTaGCAGTTGTACTTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPLGFGPWDTCISLPFAKSSRM*QLYLAE Trigger: CTCGGCCAAGTACAACTGGCACATCCTGCTGCTCTT...GGCAAAGGGCAGAGAGATGCAAGTGTCCCAAGGACCGAAGCCAAGGGGTCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCAGAATTGGCGCACGATaGCACTCTTGCCCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFSLRNFLWPGQGTWNHFRIGAR*HSCPHL Trigger: GAGGTGTGGGCAAGAGTGCCATCGTGCGCCAATTCT...GAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTACCCTCCCAGCCACTCTGAAGTGTGGGGGAGGGGAGCCACCGCCTCTGTCGTTGTATAAGAATTaGCGCACGATGGCACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTLPATLKCGGGEPPPLSLYKN*RTMALL Trigger: CAAGAGTGCCATCGTGCGCCAATTCTTATACAACGA...CAGAGGCGGTGGCTCCCCTCCCCCACACTTCAGAGTGGCTGGGAGGGTAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCCTCTCACCCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTTGCAGGTCGTGCACATaGCCATTCATGACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSHPLILVGEVCGCRGACRSCT*PFMTTA Trigger: TGCTGTGGTCATGAATGGCCATGTGCACGACCTGCA...AGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGGGTGAGAGGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTCGACACGTTCCAGCGTaGAATCACGCGTCCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVPDFLVCALQPWQRLCRHVPA*NHASAL Trigger: CAACGCGGACGCGTGATTCCACGCTGGAACGTGTCG...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGCTCTGCCCCTACAGAGACTGATCAAAACAACCTGAGACCTGATGGAGCACGATGGCACTCTTaGCCACACCTCGAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPGSAPTETDQNNLRPDGARWHS*PHLEPP Trigger: TGGGGGCTCGAGGTGTGGGCAAGAGTGCCATCGTGC...TCCATCAGGTCTCAGGTTGTTTTGATCAGTCTCTGTAGGGGCAGAGCCAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGTACCTGATTTCCTGGTCTGTGCACTGCAGCCTTGGCAAAGGCTATGTGGGAAGTCCAGGATCTaGAGGTCGTGCACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWVPDFLVCALQPWQRLCGKSRI*RSCTWP Trigger: TGGCCATGTGCACGACCTGCAGATCCTGGACTTCCC...ACATAGCCTTTGCCAAGGCTGCAGTGCACAGACCAGGAAATCAGGTACCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGAGGGACATGGGGTGAAGGCGCTGATGGGTaGGAAGTCCAGGATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRTGRHLRGQTLERGTWGEGADG*EVQDLQ Trigger: CTGCAGATCCTGGACTTCCCACCCATCAGCGCCTTC...ACCCCATGTCCCTCTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGCCCCCTGCTGGGTAGAGGGAGTGAGATTCAGTAGGGAAGCAATAGAGAGGATCTGCAGGTCGTaGACATGGCCATTCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSAPCWVEGVRFSREAIERICRS*TWPFMT Trigger: GGTCATGAATGGCCATGTGCACGACCTGCAGATCCT...CTCTATTGCTTCCCTACTGAATCTCACTCCCTCTACCCAGCAGGGGGCACTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | AGAATCATAGATTCCCTCCCACACGGGAACACCATAAATTCCCCATCCCACCCCGTCTTGCGCACCAAGTaGGACACGTTCCAGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIIDSLPHGNTINSPSHPVLRTK*DTFQRG Trigger: TCCACGCTGGAACGTGTCGCACTTGGTGCGCAAGAC...GGGGTGGGATGGGGAATTTATGGTGTTCCCGTGTGGGAGGGAATCTATGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGATGCAGGTCGTGCACATaGCCATTCATGACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPNVVAAHPSAGDNREVGCRSCT*PFMTTA Trigger: TGCTGTGGTCATGAATGGCCATGTGCACGACCTGCA...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | GTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGGGGAAGTCCAGGATCTaGAGGTCGTGCACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDRTNEDWQTPERTDIGKGKSRI*RSCTWP Trigger: TGGCCATGTGCACGACCTGCAGATCCTGGACTTCCC...CTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATCTGACTTCCAATAACAGCTCAGTGGGTGTCACACACACTTCCAGACCCCGCTTCGGAGTCCCCTaGAGCAGGCATCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FNLTSNNSSVGVTHTSRPRFGVP*SRHLPT Trigger: AGTGGGCAGATGCCTGCTGCAGGGGACTCCGAAGCG...GGGTCTGGAAGTGTGTGTGACACCCACTGAGCTGTTATTGGAAGTCAGATTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGGTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTAGAATTGGCGCACGATaGCACTCTTGCCCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKVDRTNEDWQTPERTDIRIGAR*HSCPHL Trigger: GAGGTGTGGGCAAGAGTGCCATCGTGCGCCAATTCT...AATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTACCTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CCA 90 bp | GTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGGAAGGCGCTGATGGGTaGGAAGTCCAGGATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VDRTNEDWQTPERTDIGKEGADG*EVQDLQ Trigger: CTGCAGATCCTGGACTTCCCACCCATCAGCGCCTTC...CTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR GCA 90 bp | GTAGACAGGACAAATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGAAGAGCAGCAGGATGTaGCAGTTGTACTTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDRTNEDWQTPERTDIGKKSSRM*QLYLAE Trigger: CTCGGCCAAGTACAACTGGCACATCCTGCTGCTCTT...CTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATTTGTCCTGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGATCGTTGTATAAGAATTaGCGCACGATGGCACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPNVVAAHPSAGDNREVGSLYKN*RTMALL Trigger: CAAGAGTGCCATCGTGCGCCAATTCTTATACAACGA...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGAGGGACATGGGGTGCACACAGACCTCGCTaGACTCGTTGTATAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: MRTGRHLRGQTLERGTWGAHRPR*TRCIRI Trigger: AATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGC...ACCCCATGTCCCTCTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGGACTGGCAGACACCTGAGAGGACAGACATTGGAAAGAGGGACATGGGGGCACACAGACCTCGCTaGACTCGTTGTATAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: NEDWQTPERTDIGKRDMGAHRPR*TRCIRI Trigger: AATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGC...CCCCATGTCCCTCTTTCCAATGTCTGTCCTCTCAGGTGTCTGCCAGTCCTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| 3UTR CAA 72 bp | AAGTGGGACCTAGCATCAAGGAGAGAAAATGATCCTTaGAGAGGTTTCCTCTCCACACCGTCAAACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KWDLASRRENDP*RGFLSTPSNKT Trigger: TGTTTTGTTTGACGGTGTGGAGAGGAAACCTCTCAAAGGATCATTTTCTCTCCTTGATGCTAGGTCCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGCCCAGAGTTCTCCTCCGGGGGTTTCCTGCTCTGGCCCTGGTGTCCCGCGCGCACGATGGCACTCTaGCCCACACCTCGAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPEFSSGGFLLWPWCPARTMAL*PTPRAP Trigger: GGGGGCTCGAGGTGTGGGCAAGAGTGCCATCGTGCG...CGCGGGACACCAGGGCCAGAGCAGGAAACCCCCGGAGGAGAACTCTGGGCTCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGGAATCACGCGTCCGCGTaGCAGGTCGCGCTTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAGEKAWHQKAARIRDKGNHASA*QVALVA Trigger: GGCAACAAGCGCGACCTGCAACGCGGACGCGTGATT...CCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCGGTGGCGCTGCCGGGGAGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCCCGCACTTCCAGGTCTaGCGCACCAAGTGCGACACG | + |
|
Preference number: 5 (lower is better) Translates to: LPVALPGRRPGIKKLPGSPHFQV*RTKCDT Trigger: CGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCGG...GGATCCTGGCAGCTTTTTGATGCCAGGCCTTCTCCCCGGCAGCGCCACCGGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CAA 90 bp | CACTACACTACAGCACTGAAGGTGACTGACCCAGGGAGACCCAGGTGGGAGGGGGCAGCGTGCACGTGTTaGCAGCGGGCGCAGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HYTTALKVTDPGRPRWEGAACTC*QRAQPT Trigger: TGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGC...CCCCTCCCACCTGGGTCTCCCTGGGTCAGTCACCTTCAGTGCTGTAGTGTAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS TCA 90 bp | TGGGTGGGAAGTCCAGGATCTGCAGGTCGTGCACATGGCCATTCATaGCCACAGCAGGCAGGTAGAGGCGGCGGGTGGTGGTGGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: WVGSPGSAGRAHGHS*PQQAGRGGGWWWAH Trigger: GTGTGCCCACCACCACCCGCCGCCTCTACCTGCCTGCTGTGGTCATGAATGGCCATGTGCACGACCTGCAGATCCTGGACTTCCCACCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTCAGCCTCAGGAACTTTCTTTGGCCGGGGCAGGGGACATGGAACCACTTCCGCACGATGGCACTCTaGCCCACACCTCGAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GFSLRNFLWPGQGTWNHFRTMAL*PTPRAP Trigger: GGGGGCTCGAGGTGTGGGCAAGAGTGCCATCGTGCG...GAAGTGGTTCCATGTCCCCTGCCCCGGCCAAAGAAAGTTCCTGAGGCTGAACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCCTTCTCTCCCTGACGGCTGTCGGACCTCAGCCCTCGGACCCCTTGGCTAGCAGGATGTGCCAGTaGTACTTGGCCGAGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSLTAVGPQPSDPLASRMCQ*YLAEHS Trigger: GGAGTGCTCGGCCAAGTACAACTGGCACATCCTGCT...AGCCAAGGGGTCCGAGGGCTGAGGTCCGACAGCCGTCAGGGAGAGAAGGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCCTCTCACCCTCTGATTCTCGTGGGGGAGGTGTGTGGCTGTAGGGGTGCTCCGCACTTCCAGGTCTaGCGCACCAAGTGCGACACG | + |
|
Preference number: 5 (lower is better) Translates to: TPSHPLILVGEVCGCRGAPHFQV*RTKCDT Trigger: CGTGTCGCACTTGGTGCGCAAGACCTGGAAGTGCGG...AGCACCCCTACAGCCACACACCTCCCCCACGAGAATCAGAGGGTGAGAGGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAACGTAGTAGCAGCCCACCCTAGTGCAGGAGATAACAGAGAAGTGGGACGCACGATGGCACTCTaGCCCACACCTCGAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPNVVAAHPSAGDNREVGRTMAL*PTPRAP Trigger: GGGGGCTCGAGGTGTGGGCAAGAGTGCCATCGTGCG...TCCCACTTCTCTGTTATCTCCTGCACTAGGGTGGGCTGCTACTACGTTGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS TCA 90 bp | CAGGCAGGTAGAGGCGGCGGGTGGTGGTGGGCACACAGACCTCGCTaGACTCGTTGTATAAGAATTGGCGCACGATGGCACTCTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QAGRGGGWWWAHRPR*TRCIRIGARWHSCP Trigger: TGGGCAAGAGTGCCATCGTGCGCCAATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGCCCACCACCACCCGCCGCCTCTACCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTAGAACCCAGAATGCTGGGCTGTCCAAAGTGAGGGCTGCTGTTGTACTGGCAGCGTGCACGTGTTaGCAGCGGGCGCAGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RTRTQNAGLSKVRAAVVLAACTC*QRAQPT Trigger: TGTGGGCTGCGCCCGCTGCAAACACGTGCACGCTGC...CAGTACAACAGCAGCCCTCACTTTGGACAGCCCAGCATTCTGGGTTCTAGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGGACGGACAAAAAATCACGCGTCCGCGTaGCAGGTCGCGCTTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPGIKKLPGSATRGRTKNHASA*QVALVA Trigger: GGCAACAAGCGCGACCTGCAACGCGGACGCGTGATT...TTTTGTCCGTCCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS-3UTR CAA 90 bp | AGGACTAGAACCCAGAATGCTGGGCTGTCCAAAGTGAGGGCTGCTGTTGTACTGGCGCAGCCCACACTCTaGAGCAGCTCGCTGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRTQNAGLSKVRAAVVLAQPTL*SSSLKS Trigger: GCTCTTCAGCGAGCTGCTCAAGAGTGTGGGCTGCGC...CAGTACAACAGCAGCCCTCACTTTGGACAGCCCAGCATTCTGGGTTCTAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS TCA 90 bp | GCTCTGTTCCAGGTGCAGCCCCAACCCCTCGTCTCCAGGATCTGCTaGCGGATAGTCTTGACGTACTCAAAGCTGTCAAAGCAGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ALFQVQPQPLVSRIC*RIVLTYSKLSKQQM Trigger: CATCTGCTGCTTTGACAGCTTTGAGTACGTCAAGACTATCCGTCAGCAGATCCTGGAGACGAGGGGTTGGGGCTGCACCTGGAACAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGCAGGGAGAAACACCGGAAGGTAGACAGGACAAATGAGGACTGGCAGACCTCGCTGAACTCGTaGTATAAGAATTGGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LGSREKHRKVDRTNEDWQTSLNS*YKNWRT Trigger: CGTGCGCCAATTCTTATACAACGAGTTCAGCGAGGT...CTGCCAGTCCTCATTTGTCCTGTCTACCTTCCGGTGTTTCTCCCTGCTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCCTGGCATCAAAAAGCTGCCAGGATCCGCGACAAGGGGACGGACAAAAACCTCGCTGAACTCGTaGTATAAGAATTGGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RRPGIKKLPGSATRGRTKTSLNS*YKNWRT Trigger: CGTGCGCCAATTCTTATACAACGAGTTCAGCGAGGT...TTTTGTCCGTCCCCTTGTCGCGGATCCTGGCAGCTTTTTGATGCCAGGCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCGAGCAATCCCTCAGGCCATTCCTGGAATCTCCATTATTATTATTTCTAGCAGGATGTGCCAGTaGTACTTGGCCGAGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPRAIPQAIPGISIIIISSRMCQ*YLAEHS Trigger: GGAGTGCTCGGCCAAGTACAACTGGCACATCCTGCT...AGAAATAATAATAATGGAGATTCCAGGAATGGCCTGAGGGATTGCTCGGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS CAA 90 bp | ACGTTCCAGCGTGGAATCACGCGTCCGCGTTGCAGGTCGCGCTTGTaGCCCACGATGATGATGGGCGTCTCCGAGGTGCCGATCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TFQRGITRPRCRSRL*PTMMMGVSEVPITL Trigger: GAGGGTGATCGGCACCTCGGAGACGCCCATCATCATCGTGGGCAACAAGCGCGACCTGCAACGCGGACGCGTGATTCCACGCTGGAACGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 |
||
| CDS TCA 72 bp | AGAGGCGGCGGGTGGTGGTGGGCACACAGACCTCGCTaGACTCGTTGTATAAGAATTGGCGCACGATGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGGGWWWAHRPR*TRCIRIGARWH Trigger: GTGCCATCGTGCGCCAATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGCCCACCACCACCCGCCGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS CAA 72 bp | CGGGTGGTGGTGGGCACACAGACCTCGCTGAACTCGTaGTATAAGAATTGGCGCACGATGGCACTCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RVVVGTQTSLNS*YKNWRTMALLP Trigger: GGGCAAGAGTGCCATCGTGCGCCAATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGCCCACCACCACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS CCA 72 bp | GGCACACAGACCTCGCTGAACTCGTTGTATAAGAATTaGCGCACGATGGCACTCTTGCCCACACCTCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GTQTSLNSLYKN*RTMALLPTPRA Trigger: GGCTCGAGGTGTGGGCAAGAGTGCCATCGTGCGCCAATTCTTATACAACGAGTTCAGCGAGGTCTGTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 ENSMUST00000175848.8 |
||
| CDS TCA 72 bp | CAGGTGCAGCCCCAACCCCTCGTCTCCAGGATCTGCTaGCGGATAGTCTTGACGTACTCAAAGCTGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QVQPQPLVSRIC*RIVLTYSKLSK Trigger: CTTTGACAGCTTTGAGTACGTCAAGACTATCCGTCAGCAGATCCTGGAGACGAGGGGTTGGGGCTGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175848.8 |
||
| CDS TCA 72 bp | TCCGAGGTGCCGATCACCCTCGTCTCCAGGATCTGCTaGCGGATAGTCTTGACGTACTCAAAGCTGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SEVPITLVSRIC*RIVLTYSKLSK Trigger: CTTTGACAGCTTTGAGTACGTCAAGACTATCCGTCAGCAGATCCTGGAGACGAGGGTGATCGGCACCTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021022.10 ENSMUST00000108140.10 ENSMUST00000164425.2 |
||