RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASL10A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034209

Ensembl transcript IDs: ENSMUST00000037218.2

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATTGGGAGTTAGCTGGGTCCAATCAAGATCAAAGAAAAGTCCGATaGCCAGGAGTCTGGGTGGGAGCCTGCTTTCAAGAGATTTCCCTG +
Preference number: 1 (lower is better)
Translates to: DWELAGSNQDQRKVR*PGVWVGACFQEISL
Trigger: CAGGGAAATCTCTTGAAAGCAGGCTCCCACCCAGACTCCTGGCCATCGGACTTTTCTTTGATCTTGATTGGACCCAGCTAACTCCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
3UTR-3UTR CCA 90 bp GAAGCTGTTCAAATGCCTCTGATCACATTCATAGTCAAGTCCTTTCCATCTGTGCGATGGCCAGGAGTCTaGGTGGGAGCCTGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: EAVQMPLITFIVKSFPSVRWPGV*VGACFQ
Trigger: TTGAAAGCAGGCTCCCACCCAGACTCCTGGCCATCG...CACAGATGGAAAGGACTTGACTATGAATGTGATCAGAGGCATTTGAACAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
3UTR CCA 72 bp TTAGCTGGGTCCAATCAAGATCAAAGAAAAGTCCGATaGCCAGGAGTCTGGGTGGGAGCCTGCTTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: LAGSNQDQRKVR*PGVWVGACFQE
Trigger: CTCTTGAAAGCAGGCTCCCACCCAGACTCCTGGCCATCGGACTTTTCTTTGATCTTGATTGGACCCAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
3UTR CCA 72 bp AATCAAGATCAAAGAAAAGTCCGATGGCCAGGAGTCTaGGTGGGAGCCTGCTTTCAAGAGATTTCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: NQDQRKVRWPGV*VGACFQEISLS
Trigger: GGACAGGGAAATCTCTTGAAAGCAGGCTCCCACCCAGACTCCTGGCCATCGGACTTTTCTTTGATCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
3UTR CCA 72 bp AATAAGGTCTCAGGTAAAACTGACCTGTCCAATGATTaGGAGTTAGCTGGGTCCAATCAAGATCAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: NKVSGKTDLSND*ELAGSNQDQRK
Trigger: TTTTCTTTGATCTTGATTGGACCCAGCTAACTCCCAATCATTGGACAGGTCAGTTTTACCTGAGACCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR GCA 90 bp CTGTCCAATGATTGGGAGTTAGCTGGGTCCAATCAAGATCAAAGAAAAGTCCGAGGGTGCAGCGCCCCCTaGAGGCGGAGGGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: LSNDWELAGSNQDQRKVRGCSAP*RRRVGC
Trigger: ACATCCGACCCTCCGCCTGCAGGGGGCGCTGCACCC...TCGGACTTTTCTTTGATCTTGATTGGACCCAGCTAACTCCCAATCATTGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR TCA 90 bp TGTGCTTATGACCCAATAAGGTCTCAGGTAAAACTGACCTGTCCAATGATTGGGCCGAAGCGCAGCCGCTaGCGGTCCCGCTTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: CAYDPIRSQVKLTCPMIGPKRSR*RSRLLP
Trigger: AGGCAACAAGCGGGACCGTCAGCGGCTGCGCTTCGG...CCCAATCATTGGACAGGTCAGTTTTACCTGAGACCTTATTGGGTCATAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR GCA 90 bp TGTGCTTATGACCCAATAAGGTCTCAGGTAAAACTGACCTGTCCAATGATTGGGGACGGTCCCGCTTGTTaGCTACCACCAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: CAYDPIRSQVKLTCPMIGDGPAC*LPPGWV
Trigger: CACCCATCCTGGTGGTAGGCAACAAGCGGGACCGTC...CCCAATCATTGGACAGGTCAGTTTTACCTGAGACCTTATTGGGTCATAAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR GCA 90 bp GAAGCTGTTCAAATGCCTCTGATCACATTCATAGTCAAGTCCTTTCCATCTGTGAAGGCGTCTGTGTCCTaGAAGCTCCAGTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: EAVQMPLITFIVKSFPSVKASVS*KLQSLG
Trigger: CCCTAAAGACTGGAGCTTGCAGGACACAGACGCCTT...CACAGATGGAAAGGACTTGACTATGAATGTGATCAGAGGCATTTGAACAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR CCA 90 bp GACCTGTCCAATGATTGGGAGTTAGCTGGGTCCAATCAAGATCAAAGAAAAGTCCGTGCCAATTGTATTTaGCTGAGCACTCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DLSNDWELAGSNQDQRKVRANCI*LSTRGS
Trigger: GCTACCTCGAGTGCTCAGCCAAATACAATTGGCACG...GACTTTTCTTTGATCTTGATTGGACCCAGCTAACTCCCAATCATTGGACAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR TCA 90 bp GAAGCTGTTCAAATGCCTCTGATCACATTCATAGTCAAGTCCTTTCCATCTGTGCCAATTGTATTTGGCTaGGCACTCGAGGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: EAVQMPLITFIVKSFPSVPIVFG*ALEVAT
Trigger: TGTGGCTACCTCGAGTGCTCAGCCAAATACAATTGG...CACAGATGGAAAGGACTTGACTATGAATGTGATCAGAGGCATTTGAACAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR CCA 90 bp TCCAATGATTGGGAGTTAGCTGGGTCCAATCAAGATCAAAGAAAAGTCCGATGGTCACCAAACAAGAATTaGCGGATGATGGCGGTCTTA +
Preference number: 4 (lower is better)
Translates to: SNDWELAGSNQDQRKVRWSPNKN*RMMAVL
Trigger: TAAGACCGCCATCATCCGCCAATTCTTGTTTGGTGA...CCATCGGACTTTTCTTTGATCTTGATTGGACCCAGCTAACTCCCAATCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR GCA 90 bp TTTGCATTTGTTTTTATTACCTGGTTAGGCATGGCTTTAAAAGTGTCTCCAGTACGAAACTGTCGGGGCTaGAGATGTCGTAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: FAFVFITWLGMALKVSPVRNCRG*RCRRPA
Trigger: TGCTGGTCTACGACATCTGCAGCCCCGACAGTTTCG...TACTGGAGACACTTTTAAAGCCATGCCTAACCAGGTAATAAAAACAAATGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 90 bp GTGCACGGCGAGGTCCGAAGCGCAGCCGCTGACGGTCCCGCTTGTTaGCTACCACCAGGATGGGTGCCTCTGGTGCTCCCGCCGGCCTGT +
Preference number: 5 (lower is better)
Translates to: VHGEVRSAAADGPAC*LPPGWVPLVLPPAC
Trigger: ACAGGCCGGCGGGAGCACCAGAGGCACCCATCCTGGTGGTAGGCAACAAGCGGGACCGTCAGCGGCTGCGCTTCGGACCTCGCCGTGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 90 bp GCAGCGCGCTGGGTGCAGCGCCCCCTGCAGGCGGAGGGTCGGATGTaGAGGACGTGTGCGCACCAAAGCACAACGCAGAAGCTCTCGGAA +
Preference number: 5 (lower is better)
Translates to: AARWVQRPLQAEGRM*RTCAHQSTTQKLSE
Trigger: TTCCGAGAGCTTCTGCGTTGTGCTTTGGTGCGCACACGTCCTGCACATCCGACCCTCCGCCTGCAGGGGGCGCTGCACCCAGCGCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CCA 90 bp CTGAGCACTCGAGGTAGCCACAGCGCCAGCCCCTACGAACTAGAGTaGCCAGTGCACGGCGAGGTCCGAAGCGCAGCCGCTGACGGTCCC +
Preference number: 5 (lower is better)
Translates to: LSTRGSHSASPYELE*PVHGEVRSAAADGP
Trigger: GGGACCGTCAGCGGCTGCGCTTCGGACCTCGCCGTGCACTGGCCACTCTAGTTCGTAGGGGCTGGCGCTGTGGCTACCTCGAGTGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 90 bp GGTGCAGCGCCCCCTGCAGGCGGAGGGTCGGATGTGCAGGACGTGTaGGCACCAAAGCACAACGCAGAAGCTCTCGGAAGAGACGCAGCA +
Preference number: 5 (lower is better)
Translates to: GAAPPAGGGSDVQDV*APKHNAEALGRDAA
Trigger: TGCTGCGTCTCTTCCGAGAGCTTCTGCGTTGTGCTTTGGTGCGCACACGTCCTGCACATCCGACCCTCCGCCTGCAGGGGGCGCTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CCA 90 bp CGCCGTCGAGCAGCACCGCGGGTCGGTAGAGGCAGGGACTGTCCGTaGGTCGGTGGCGCTCAGGATAGTCACCAAACAAGAATTGGCGGA +
Preference number: 5 (lower is better)
Translates to: RRRAAPRVGRGRDCP*VGGAQDSHQTRIGG
Trigger: TCCGCCAATTCTTGTTTGGTGACTATCCTGAGCGCCACCGACCCACGGACAGTCCCTGCCTCTACCGACCCGCGGTGCTGCTCGACGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS TCA 90 bp GCTCCAGTCTTTAGGGTCCGGCCACTCCTCAAGACTTCTGGGGCTTaGGCCGGGTCCAGCGACGTCACCATCGCGGATACTCAGGTCGTA +
Preference number: 5 (lower is better)
Translates to: APVFRVRPLLKTSGA*AGSSDVTIADTQVV
Trigger: TACGACCTGAGTATCCGCGATGGTGACGTCGCTGGACCCGGCTCAAGCCCCAGAAGTCTTGAGGAGTGGCCGGACCCTAAAGACTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS TCA 90 bp TGGGTCGGTGGCGCTCAGGATAGTCACCAAACAAGAATTGGCGGATaGTGGCGGTCTTACCCACTCCCGGAGCACCCAGAACAGCCACCC +
Preference number: 5 (lower is better)
Translates to: WVGGAQDSHQTRIGG*WRSYPLPEHPEQPP
Trigger: GGGTGGCTGTTCTGGGTGCTCCGGGAGTGGGTAAGACCGCCATCATCCGCCAATTCTTGTTTGGTGACTATCCTGAGCGCCACCGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CCA 90 bp AACGCAGAAGCTCTCGGAAGAGACGCAGCACGTGCCAATTGTATTTaGCTGAGCACTCGAGGTAGCCACAGCGCCAGCCCCTACGAACTA +
Preference number: 5 (lower is better)
Translates to: NAEALGRDAARANCI*LSTRGSHSASPYEL
Trigger: TAGTTCGTAGGGGCTGGCGCTGTGGCTACCTCGAGTGCTCAGCCAAATACAATTGGCACGTGCTGCGTCTCTTCCGAGAGCTTCTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR CAA 90 bp GCTGTTCAAATGCCTCTGATCACATTCATAGTCAAGTCCTTTCCATCTGTGCTTCGCAGCACGTGCCAATaGTATTTGGCTGAGCACTCG +
Preference number: 5 (lower is better)
Translates to: AVQMPLITFIVKSFPSVLRSTCQ*YLAEHS
Trigger: CGAGTGCTCAGCCAAATACAATTGGCACGTGCTGCG...AAGCACAGATGGAAAGGACTTGACTATGAATGTGATCAGAGGCATTTGAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS-3UTR CAA 90 bp CTGTCCAATGATTGGGAGTTAGCTGGGTCCAATCAAGATCAAAGAAAAGTCCGAGTCACCAAACAAGAATaGGCGGATGATGGCGGTCTT +
Preference number: 5 (lower is better)
Translates to: LSNDWELAGSNQDQRKVRVTKQE*ADDGGL
Trigger: AAGACCGCCATCATCCGCCAATTCTTGTTTGGTGAC...TCGGACTTTTCTTTGATCTTGATTGGACCCAGCTAACTCCCAATCATTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 72 bp CACATGAGGCTGCAGCGCGCTGGGTGCAGCGCCCCCTaGAGGCGGAGGGTCGGATGTGCAGGACGTGTGCGC +
Preference number: 6 (lower is better)
Translates to: HMRLQRAGCSAP*RRRVGCAGRVR
Trigger: GCGCACACGTCCTGCACATCCGACCCTCCGCCTGCAGGGGGCGCTGCACCCAGCGCGCTGCAGCCTCATGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 72 bp GAGGTCCGAAGCGCAGCCGCTGACGGTCCCGCTTGTTaGCTACCACCAGGATGGGTGCCTCTGGTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: EVRSAAADGPAC*LPPGWVPLVLP
Trigger: CGGGAGCACCAGAGGCACCCATCCTGGTGGTAGGCAACAAGCGGGACCGTCAGCGGCTGCGCTTCGGACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CCA 72 bp CGAGGTAGCCACAGCGCCAGCCCCTACGAACTAGAGTaGCCAGTGCACGGCGAGGTCCGAAGCGCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: RGSHSASPYELE*PVHGEVRSAAA
Trigger: AGCGGCTGCGCTTCGGACCTCGCCGTGCACTGGCCACTCTAGTTCGTAGGGGCTGGCGCTGTGGCTACCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 72 bp TGGGTGCAGCGCCCCCTGCAGGCGGAGGGTCGGATGTaGAGGACGTGTGCGCACCAAAGCACAACGCAGAAG +
Preference number: 6 (lower is better)
Translates to: WVQRPLQAEGRM*RTCAHQSTTQK
Trigger: CTTCTGCGTTGTGCTTTGGTGCGCACACGTCCTGCACATCCGACCCTCCGCCTGCAGGGGGCGCTGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 72 bp CCCCCTGCAGGCGGAGGGTCGGATGTGCAGGACGTGTaGGCACCAAAGCACAACGCAGAAGCTCTCGGAAGA +
Preference number: 6 (lower is better)
Translates to: PPAGGGSDVQDV*APKHNAEALGR
Trigger: TCTTCCGAGAGCTTCTGCGTTGTGCTTTGGTGCGCACACGTCCTGCACATCCGACCCTCCGCCTGCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CCA 72 bp GCAGCACCGCGGGTCGGTAGAGGCAGGGACTGTCCGTaGGTCGGTGGCGCTCAGGATAGTCACCAAACAAGA +
Preference number: 6 (lower is better)
Translates to: AAPRVGRGRDCP*VGGAQDSHQTR
Trigger: TCTTGTTTGGTGACTATCCTGAGCGCCACCGACCCACGGACAGTCCCTGCCTCTACCGACCCGCGGTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 72 bp CCGCTTGTTGCCTACCACCAGGATGGGTGCCTCTGGTaGTCCCGCCGGCCTGTTTTCTGCTATACGCTGCCT +
Preference number: 6 (lower is better)
Translates to: PLVAYHQDGCLW*SRRPVFCYTLP
Trigger: AGGCAGCGTATAGCAGAAAACAGGCCGGCGGGAGCACCAGAGGCACCCATCCTGGTGGTAGGCAACAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS GCA 72 bp CTGACGGTCCCGCTTGTTGCCTACCACCAGGATGGGTaGCTCTGGTGCTCCCGCCGGCCTGTTTTCTGCTAT +
Preference number: 6 (lower is better)
Translates to: LTVPLVAYHQDG*LWCSRRPVFCY
Trigger: ATAGCAGAAAACAGGCCGGCGGGAGCACCAGAGGCACCCATCCTGGTGGTAGGCAACAAGCGGGACCGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CCA 72 bp GTCCCGCTTGTTGCCTACCACCAGGATGGGTGCCTCTaGTGCTCCCGCCGGCCTGTTTTCTGCTATACGCTG +
Preference number: 6 (lower is better)
Translates to: VPLVAYHQDGCL*CSRRPVFCYTL
Trigger: CAGCGTATAGCAGAAAACAGGCCGGCGGGAGCACCAGAGGCACCCATCCTGGTGGTAGGCAACAAGCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS TCA 72 bp TTTAGGGTCCGGCCACTCCTCAAGACTTCTGGGGCTTaGGCCGGGTCCAGCGACGTCACCATCGCGGATACT +
Preference number: 6 (lower is better)
Translates to: FRVRPLLKTSGA*AGSSDVTIADT
Trigger: AGTATCCGCGATGGTGACGTCGCTGGACCCGGCTCAAGCCCCAGAAGTCTTGAGGAGTGGCCGGACCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS TCA 72 bp TCGGAAGAGACGCAGCACGTGCCAATTGTATTTGGCTaGGCACTCGAGGTAGCCACAGCGCCAGCCCCTACG +
Preference number: 6 (lower is better)
Translates to: SEETQHVPIVFG*ALEVATAPAPT
Trigger: CGTAGGGGCTGGCGCTGTGGCTACCTCGAGTGCTCAGCCAAATACAATTGGCACGTGCTGCGTCTCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CAA 72 bp GGGTCGGTGGCGCTCAGGATAGTCACCAAACAAGAATaGGCGGATGATGGCGGTCTTACCCACTCCCGGAGC +
Preference number: 6 (lower is better)
Translates to: GSVALRIVTKQE*ADDGGLTHSRS
Trigger: GCTCCGGGAGTGGGTAAGACCGCCATCATCCGCCAATTCTTGTTTGGTGACTATCCTGAGCGCCACCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2
CDS CAA 90 bp ACTGTCCGTGGGTCGGTGGCGCTCAGGATAGTCACCAAACAAGAATaGGCGGATGATGGCGGTCTTACCCACTCCCGGAGCACCCAGAAC +
Preference number: 6 (lower is better)
Translates to: TVRGSVALRIVTKQE*ADDGGLTHSRSTQN
Trigger: GTTCTGGGTGCTCCGGGAGTGGGTAAGACCGCCATCATCCGCCAATTCTTGTTTGGTGACTATCCTGAGCGCCACCGACCCACGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037218.2