Pregenerated sensors for RASIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044562Ensembl transcript IDs: ENSMUST00000057927.10
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTGCGCGCCACAGGTCCTaGACCAGCAGAGGGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YAQAGSLLRSDAVSSCARARHRS*TSRGRS Trigger: GGAGCGCCCTCTGCTGGTGCAGGACCTGTGGCGCGC...ACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | TACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTGCAGCTTCTTCTCGCTaGCCCAGCGCTGCGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: YAQAGSLLRSDAVSSCARAASSR*PSAARP Trigger: GGGGCGCGCAGCGCTGGGCCAGCGAGAAGAAGCTGC...ACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | GCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCGGCCCGCGCGCACCGTaGAATGTCGAGGCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: AQAGSLLRSDAVSSCARSGPRAP*NVEAGC Trigger: ACATCCTGCCTCGACATTGCACGGTGCGCGCGGGCC...GGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGCGGCAGGGGCTCGCTaGTTCGGCTCCCCGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSAAAGAR*FGSPCR Trigger: CCGACACGGGGAGCCGAAGCAGCGAGCCCCTGCCGC...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCAGGCCCACTGGAAGATaGAGCTTCCCGAAGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQAGSLLRSDAVSSCARSRPTGR*SFPKRG Trigger: CCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCT...GGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | GCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCTTTCTCTGGTGGGTCCCAGGCTaGTGGGGGACCACGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGSLLRSDAVSSCARSFLWWVPG*WGTTAR Trigger: CCTGGCCGTGGTCCCCCACCAGCCTGGGACCCACCA...GAGAAAGGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCTTTCTCATTGGGGCGCCGCCGGCCCCTaGGCCCCGAAACAGCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: LPFKKRCSFKLRAFLSHWGAAGP*APKQLR Trigger: TCGCAGCTGTTTCGGGGCTCAGGGGCCGGCGGCGCC...CCAATGAGAAAGGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | TACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTGAAGGTGTCCACATATaGGGCTGGGGATCCCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: YAQAGSLLRSDAVSSCAREGVHI*GWGSPA Trigger: CGCGGGGGATCCCCAGCCCCATATGTGGACACCTTC...ACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGACAGCCATTGTGTGTaGCGGGGGCGCCCCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSADSHCV*RGRPGM Trigger: CATCCCGGGGCGCCCCCGTCACACACAATGGCTGTC...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | ACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAGGTGAGGCGCAGGCGTaGGCTGCCCAGGGGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TSWHSHPKPIFPLSHRLPGEAQA*AAQGQD Trigger: ATCCTGCCCCTGGGCAGCTCACGCCTGCGCCTCACC...TGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAGCCCCGAAGGCCTCCTaGTCCAGCCGTCGAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSWHSHPKPIFPLSHRLPAPKAS*SSRRAS Trigger: GGAGGCTCGACGGCTGGAGCAGGAGGCCTTCGGGGC...TGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | GCTCTACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCATGCTGCACACACAGTaGCAGCAGAGTGGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ALRPGGLPFKKRCSFKLRMLHTQ*QQSGWP Trigger: GGGCCAGCCACTCTGCTGGCACTGTGTGTGCAGCAT...GCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | ACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCATGGGTCCCAGGCTGGTaGGGGACCACGGCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: TSWHSHPKPIFPLSHRLPWVPGW*GTTART Trigger: GGTCCTGGCCGTGGTCCCCCACCAGCCTGGGACCCA...TGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAGCCAACACCCGCAGGTaGTCGGCACGCCACTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: TSWHSHPKPIFPLSHRLPANTRR*SARHSP Trigger: AGGCGAGTGGCGTGCCGAGCACCTGCGGGTGTTGGC...TGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAAAGGACTGGCCAGAGCTaGCCCGCCAGATGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PIVYQPNNSNSQPSTQGKRTGQS*PARCCP Trigger: CGGGCAGCATCTGGCGGGGCAGCTCTGGCCAGTCCT...TTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACGCCTCGCCGCGCTCCTaGAGGCCACGGCCACACAAA | + |
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Preference number: 4 (lower is better) Translates to: IHIPSPSSHCPIVYQPNNASPRS*RPRPHK Trigger: TTTGTGTGGCCGTGGCCTGCAGGAGCGCGGCGAGGC...GTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCCACAGCATCCCGCTCTaGAGGTGGTGGGTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSAHSIPL*RWWVPG Trigger: GCCTGGGACCCACCACCTGCAGAGCGGGATGCTGTG...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | ACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAGCTGCGAGATGCGCTTaGCTCGGCTGCCCGACGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSWHSHPKPIFPLSHRLPAARCA*LGCPTL Trigger: GAGCGTCGGGCAGCCGAGCCAAGCGCATCTCGCAGC...TGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | AACTACAACTCCCAAAATGCTCTACGCCCAGGCGGGCTCCCTTTTAAGAAGCGAACAGTGCCAGCAGAGTaGCTGGCCCGAGCGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NYNSQNALRPGGLPFKKRTVPAE*LARAGA Trigger: TGCCCCCGCTCGGGCCAGCCACTCTGCTGGCACTGT...TCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTAGAGCATTTTGGGAGTTGTAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | TTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACGCACGCTCTTGTAGTTaGCGCCCGACGCCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLAFTSQAHLPTVPSSTNARSCS*RPTPAQ Trigger: CTGGGCTGGCGTCGGGCGCCAACTACAAGAGCGTGC...GTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCAGCATCAGCTGCCCCTaGGGCCATGCTAAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSASISCP*GHAKGL Trigger: CAGGCCCTTAGCATGGCCCCAGGGGCAGCTGATGCT...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTGCGCCAGGCCCTaGCAGCTCTGCTCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HPKPIFPLSHRLPTQQLKLCARP*QLCSSC Trigger: ACAGCTGGAGCAGAGCTGCCAGGGCCTGGCGCAGAG...TTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CTCTACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGGTCCATGGCGATGATTaGCTGGCAGCTCCTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LYAQAGSLLRSDAVSSCAVHGDD*LAAPAV Trigger: AACAGCAGGAGCTGCCAGCCAATCATCGCCATGGAC...CGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | TTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACAGGAGATGGTGGAGCTaGGCTGGAGTCAGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FLAFTSQAHLPTVPSSTNRRWWS*AGVRVG Trigger: CCCCACCCTGACTCCAGCTCAGCTCCACCATCTCCT...GTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTGGGGGTCCATGGCGATaGTTGGCTGGCAGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HRLPTQQLKLSAVYAGKTGGPWR*LAGSSC Trigger: GCAGGAGCTGCCAGCCAATCATCGCCATGGACCCCC...AGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTGAGCCCCGAAACAGCTaGGAGATGCGCTTGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: HLPTVPSSTNPTTQTLSREPRNS*EMRLAR Trigger: CCGAGCCAAGCGCATCTCGCAGCTGTTTCGGGGCTC...ACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | TTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACTTTCAGATCGCTCCTTaGCCCCGGACCCAGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: FLAFTSQAHLPTVPSSTNFQIAP*PRTQWG Trigger: CCCCCACTGGGTCCGGGGGCAAGGAGCGATCTGAAA...GTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAAGCCATGCTAAGGGCCTaGTGCCTGCGTTCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HPKPIFPLSHRLPTQQLKAMLRA*CLRSCC Trigger: GCAGCAGGAACGCAGGCAGCAGGCCCTTAGCATGGC...TTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAAAGCGCCGCCCCAGTTTaGCGAGCTGTTTCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PIVYQPNNSNSQPSTQGKSAAPV*RAVSLG Trigger: CCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCT...TTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTATCCTGGACCAGGACTaGCCAGAGCTGCCCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HRLPTQQLKLSAVYAGKTILDQD*PELPRQ Trigger: CTGGCGGGGCAGCTCTGGCCAGTCCTGGTCCAGGAT...AGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTCCCCTCGGGAACTCCCTCTaGGTGGTTCTCTGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PTQQLKLSAVYAGKTTTPLGNSL*VVLWLA Trigger: CGCCAGCCAGAGAACCACCCAGAGGGAGTTCCCGAG...GGGAGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | TACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTGCAGCTCACACTGACTaGTCAGTTCTAGAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: YAQAGSLLRSDAVSSCARAAHTD*SVLELP Trigger: AGGCAGCTCTAGAACTGACCAGTCAGTGTGAGCTGC...ACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | GCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCTTTCTCTCCGGAAGAACTCAGTaGCAATGTCACCCAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: AGSLLRSDAVSSCARSFLSGRTQ*QCHPAR Trigger: CCGGGCTGGGTGACATTGCCACTGAGTTCTTCCGGA...GAGAAAGGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | TACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTATGGCGATGATTGGCTaGCAGCTCCTGCTGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: YAQAGSLLRSDAVSSCARMAMIG*QLLLFK Trigger: CTTGAACAGCAGGAGCTGCCAGCCAATCATCGCCAT...ACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | AACTACAACTCCCAAAATGCTCTACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATCCGTTGGTACCATCTaGGCATCAGCTGCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NYNSQNALRPGGLPFKKRSVGTI*ASAAPG Trigger: CCCAGGGGCAGCTGATGCTCAGATGGTACCAACGGA...TCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTAGAGCATTTTGGGAGTTGTAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCCGGGGTGCAGCTCTaGCTCCCGCAGCAAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: IHIPSPSSHCPIVYQPNNSGVQL*LPQQKT Trigger: TGTCTTTTGCTGCGGGAGGCAGAGCTGCACCCCGGA...GTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ATTACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTAAACAGGTCTCCGGGGTaGAGCTCTGCCTCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ITSWHSHPKPIFPLSHRLNRSPG*SSASRS Trigger: GCTGCGGGAGGCAGAGCTGCACCCCGGAGACCTGTT...TAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCTGGCCATCCATAGTATaGGTGGTCGCAGCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSAWPSIV*VVAAPQ Trigger: CTGTGGAGCTGCGACCACTCATACTATGGATGGCCA...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTTGCTCCATGAAGCCTTaGGCAGGGAGGTGCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LPTQQLKLSAVYAGKTTTCSMKP*AGRCGA Trigger: TGCCCCGCACCTCCCTGCTCAAGGCTTCATGGAGCA...AGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAATCGAGGCAGGATGTCTaGGGCGTTGAGGAAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HPKPIFPLSHRLPTQQLKSRQDV*GVEEGV Trigger: GACACCTTCCTCAACGCCCCAGACATCCTGCCTCGA...TTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGGTTTCCTTGGGGAATTaGTCCACAGGCCCACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSSHCPIVYQPNNSNSQPVSLGN*STGPLE Trigger: TTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAAC...CGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAAGCTCTGCTCCAGCTGTaGAAGGGTTACTGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PIVYQPNNSNSQPSTQGKALLQL*KGYCPG Trigger: TCCTGGACAGTAACCCTTTCACAGCTGGAGCAGAGC...TTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTCCGGGACGGTTGCTGGGTaGCTGAATGAGGCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TNPTTQTLSRLRRENYNSGTVAG*LNEALS Trigger: ACTCAGTGCCTCATTCAGGCACCCAGCAACCGTCCC...GGAGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTTCCCTCGCAGAATGCTaGACACACAGTGCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HLPTVPSSTNPTTQTLSRSLAEC*THSASR Trigger: TCTGCTGGCACTGTGTGTGCAGCATTCTGCGAGGGA...ACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCACAGTTCCAAGTCATTaGAGAGCTGTGGGTCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSATVPSH*RAVGPR Trigger: CCTCGGACCCACAGCTCTGCAATGACTTGGAACTGT...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAAGATCCACAGGCCCACTaGAAGATGGAGCTTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PIVYQPNNSNSQPSTQGKDPQAH*KMELPE Trigger: TTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATC...TTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | TACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTGCAGGTTCACAGCAATaGAAAGTTTCCGGAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: YAQAGSLLRSDAVSSCARAGSQQ*KVSGRT Trigger: AGTTCTTCCGGAAACTTTCCATTGCTGTGAACCTGC...ACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | TTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACTGCTGGGTGCCTGAATaGGGCACTGAGTCAACTGAT | + |
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Preference number: 4 (lower is better) Translates to: FLAFTSQAHLPTVPSSTNCWVPE*GTESTD Trigger: ATCAGTTGACTCAGTGCCTCATTCAGGCACCCAGCA...GTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | ACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTCCGGATGTCTGGGGCGTTaGGGAAGGTGTCCACATATG | + |
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Preference number: 4 (lower is better) Translates to: TNPTTQTLSRLRRENYNSGCLGR*GRCPHM Trigger: CATATGTGGACACCTTCCTCAACGCCCCAGACATCC...GGAGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | ATTACTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTAGGAGGCGACGGAGCCTaGGCAGTTCTCTATGCAATG | + |
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Preference number: 4 (lower is better) Translates to: ITSWHSHPKPIFPLSHRLGGDGA*AVLYAM Trigger: CATTGCATAGAGAACTGCGCAGGCTCCGTCGCCTCC...TAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCTTTCTCATTGGGGCGAGCTGTTTCCTTaGGGAATTGATCCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPFKKRCSFKLRAFLSHWGELFP*GIDPQA Trigger: GGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCC...CCAATGAGAAAGGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | GCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCGCGTTCCTTTCTCAGCTCAACAGCTCTGTaGTGTTGGCCATCCATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGSLLRSDAVSSCARSFLSSTAL*CWPSIV Trigger: TACTATGGATGGCCAACACCACAGAGCTGTTGAGCT...GAGAAAGGAACGCGCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTCCCAAAATGGAGGACAGGCCCTCCTaGTCAGCCTCCTTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: QQLKLSAVYAGKTTTPKMEDRPS*SASFSI Trigger: GATGGAGAAGGAGGCTGACCAGGAGGGCCTGTCCTC...CATTTTGGGAGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTATGGTGGAGCTGAGCTaGAGTCAGGGTGGGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: LPTQQLKLSAVYAGKTTTMVELS*SQGGVV Trigger: GACTACCCCACCCTGACTCCAGCTCAGCTCCACCAT...AGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGAGAGCTGGCAGTGTTaGATAAAGAGTCTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIFPLSHRLPTQQLKLSAESWQC*IKSLGE Trigger: CTCACCAAGACTCTTTATTCAACACTGCCAGCTCTC...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CCA 90 bp | CCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAAGGGTGGTTCTCTGGCTaGCGGTCTCCAATTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PIVYQPNNSNSQPSTQGKGWFSG*RSPISL Trigger: TAAAGAAATTGGAGACCGCCAGCCAGAGAACCACCC...TTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR GCA 90 bp | CTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTAGGATGAGCGGAGGGTaGGAGGAAAAACTTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LPTQQLKLSAVYAGKTTTRMSGG*EEKLSK Trigger: CTTTGAAAGTTTTTCCTCGCACCCTCCGCTCATCCT...AGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR TCA 90 bp | CAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACTCCCAAAATGAATAAAGAGTCTTGGTaGGGTAGTAGACCGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLKLSAVYAGKTTTPKMNKESW*GSRPTA Trigger: AGCAGTCGGTCTACTACCTCACCAAGACTCTTTATT...CATTTTGGGAGTTGTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | TCCTGCACCAGCAGAGGGCGCTCCGCGTCGGCCAACACCCGCAGGTaGTCGGCACGCCACTCGCCTCCGCCCACGCCGACCGCGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SCTSRGRSASANTRR*SARHSPPPTPTAGR Trigger: CCGGCCCGCGGTCGGCGTGGGCGGAGGCGAGTGGCGTGCCGAGCACCTGCGGGTGTTGGCCGACGCGGAGCGCCCTCTGCTGGTGCAGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | GCTCCGGAGCTACACCCGCCGCCAGTTCAGGCAGCTTCTTCTCGCTaGCCCAGCGCTGCGCGCCCCCAGGCGTGCCAGGACCCCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: APELHPPPVQAASSR*PSAARPQACQDPRR Trigger: GCGCCGGGGGTCCTGGCACGCCTGGGGGCGCGCAGCGCTGGGCCAGCGAGAAGAAGCTGCCTGAACTGGCGGCGGGTGTAGCTCCGGAGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | GATGGGGCGTTTGTGCCGTCTGCATCCGCAGCCCCGAAGGCCTCCTaGTCCAGCCGTCGAGCCTCCTCGCGGCCGCGCAGCTCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DGAFVPSASAAPKAS*SSRRASSRPRSSKR Trigger: GCGCTTTGAGCTGCGCGGCCGCGAGGAGGCTCGACGGCTGGAGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAACGCCCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | ACACAGTGCCAGCAGAGTGGCTGGCCCGAGCGGGGGCAGGTCCCCTaGTCCCGAGGCTGCAGCTCGCACGATCTCGCCCAACAGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQCQQSGWPERGQVP*SRGCSSHDLAQQRL Trigger: GAGGCGCTGTTGGGCGAGATCGTGCGAGCTGCAGCCTCGGGAGCAGGGGACCTGCCCCCGCTCGGGCCAGCCACTCTGCTGGCACTGTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 90 bp | CGCTCTTGTAGTTGGCGCCCGACGCCAGCCCAGAAGCGAAGATCTTaGGCACTCCCGGGGGCACCGCGGCACGCGTGGGCAACGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSCSWRPTPAQKRRS*ALPGAPRHAWATGA Trigger: AGCCCCCGTTGCCCACGCGTGCCGCGGTGCCCCCGGGAGTGCTCAAGATCTTCGCTTCTGGGCTGGCGTCGGGCGCCAACTACAAGAGCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | CAGGTGGCCCAGCTCCAGCTCCCTCGCAGAATGCTGCACACACAGTaGCAGCAGAGTGGCTGGCCCGAGCGGGGGCAGGTCCCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVAQLQLPRRMLHTQ*QQSGWPERGQVPCS Trigger: GGAGCAGGGGACCTGCCCCCGCTCGGGCCAGCCACTCTGCTGGCACTGTGTGTGCAGCATTCTGCGAGGGAGCTGGAGCTGGGCCACCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 90 bp | CAGCTCGCACGATCTCGCCCAACAGCGCCTCTTCCTCTCGTGGTCTaGACCGCAGCACCGGCTCGCGGCCATCCAGGTAGGCGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLARSRPTAPLPLVV*TAAPARGHPGRRPA Trigger: CGCTGGCCGCCTACCTGGATGGCCGCGAGCCGGTGCTGCGGTTCAGACCACGAGAGGAAGAGGCGCTGTTGGGCGAGATCGTGCGAGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | AGCAAGCGAGGCAGGTGGCCCAGCTCCAGCTCCCTCGCAGAATGCTaGACACACAGTGCCAGCAGAGTGGCTGGCCCGAGCGGGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SKRGRWPSSSSLAEC*THSASRVAGPSGGR Trigger: CCTGCCCCCGCTCGGGCCAGCCACTCTGCTGGCACTGTGTGTGCAGCATTCTGCGAGGGAGCTGGAGCTGGGCCACCTGCCTCGCTTGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | GGCTGCAGCTCGCACGATCTCGCCCAACAGCGCCTCTTCCTCTCGTaGTCTGAACCGCAGCACCGGCTCGCGGCCATCCAGGTAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCSSHDLAQQRLFLS*SEPQHRLAAIQVGG Trigger: GCCGCCTACCTGGATGGCCGCGAGCCGGTGCTGCGGTTCAGACCACGAGAGGAAGAGGCGCTGTTGGGCGAGATCGTGCGAGCTGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | GGGCTCAGGGCCCGCGCGCACCGTGCAATGTCGAGGCAGGATGTCTaGGGCGTTGAGGAAGGTGTCCACATATGGGGCTGGGGATCCCCC | + |
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Preference number: 5 (lower is better) Translates to: GLRARAHRAMSRQDV*GVEEGVHIWGWGSP Trigger: GGGGGATCCCCAGCCCCATATGTGGACACCTTCCTCAACGCCCCAGACATCCTGCCTCGACATTGCACGGTGCGCGCGGGCCCTGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 90 bp | CCCAGGCTGGTGGGGGACCACGGCCAGGACCCAACTGGTAGTGGCTaGGGAGATGGTGGAGCTGAGCTGGAGTCAGGGTGGGGTAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PRLVGDHGQDPTGSG*GDGGAELESGWGSQ Trigger: CTGACTACCCCACCCTGACTCCAGCTCAGCTCCACCATCTCCTCAGCCACTACCAGTTGGGTCCTGGCCGTGGTCCCCCACCAGCCTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | CTGCCCGAGACCTATTCTTCTGGGTCCGCCAAGATGGGGCGTTTGTaGCGTCTGCATCCGCAGCCCCGAAGGCCTCCTGCTCCAGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: LPETYSSGSAKMGRL*RLHPQPRRPPAPAV Trigger: GACGGCTGGAGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAACGCCCCATCTTGGCGGACCCAGAAGAATAGGTCTCGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | AGACCTATTCTTCTGGGTCCGCCAAGATGGGGCGTTTGTGCCGTCTaGATCCGCAGCCCCGAAGGCCTCCTGCTCCAGCCGTCGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RPILLGPPRWGVCAV*IRSPEGLLLQPSSL Trigger: GAGGCTCGACGGCTGGAGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAACGCCCCATCTTGGCGGACCCAGAAGAATAGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | GGCAGCGCTGGGCCAGCGCCGCCCCAGTTTGGCGAGCTGTTTCCTTaGGGAATTGATCCACAGGCCCACTGGAAGATGGAGCTTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: GSAGPAPPQFGELFP*GIDPQAHWKMELPE Trigger: TTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTGGCCCAGCGCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | GAAGTCTCCAGGGTCCGTTGGTACCATCTGAGCATCAGCTGCCCCTaGGGCCATGCTAAGGGCCTGCTGCCTGCGTTCCTGCTGCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: EVSRVRWYHLSISCP*GHAKGLLPAFLLPS Trigger: CGAAGGCAGCAGGAACGCAGGCAGCAGGCCCTTAGCATGGCCCCAGGGGCAGCTGATGCTCAGATGGTACCAACGGACCCTGGAGACTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | CCTCATCCAGGAGGGCCAAGGCCTCATCACACAGTTCCAAGTCATTaGAGAGCTGTGGGTCCGAGGACAGGCCCTCCTGGTCAGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PHPGGPRPHHTVPSH*RAVGPRTGPPGQPP Trigger: AGGAGGCTGACCAGGAGGGCCTGTCCTCGGACCCACAGCTCTGCAATGACTTGGAACTGTGTGATGAGGCCTTGGCCCTCCTGGATGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | TGTTCAAGATCCCAGAGGAGGCGACGGAGCCTGCGCAGTTCTCTATaGAATGCGTCATCTGTCACAGGGCCGGTGAGGCGCAGGCGTGAG | + |
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Preference number: 5 (lower is better) Translates to: CSRSQRRRRSLRSSL*NASSVTGPVRRRRE Trigger: CTCACGCCTGCGCCTCACCGGCCCTGTGACAGATGACGCATTGCATAGAGAACTGCGCAGGCTCCGTCGCCTCCTCTGGGATCTTGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | GCGAGCTGTTTCCTTGGGGAATTGATCCACAGGCCCACTGGAAGATaGAGCTTCCCGAAGCGGGGGCTTCCGCCCTCCTTTCGTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ASCFLGELIHRPTGR*SFPKRGLPPSFRSP Trigger: TGGTGAACGAAAGGAGGGCGGAAGCCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | CAGTTTGGCGAGCTGTTTCCTTGGGGAATTGATCCACAGGCCCACTaGAAGATGGAGCTTCCCGAAGCGGGGGCTTCCGCCCTCCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QFGELFPWGIDPQAH*KMELPEAGASALLS Trigger: CGAAAGGAGGGCGGAAGCCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | CCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCAGCCCTGCTCCATGAAGCCTaGAGCAGGGAGGTGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PIFPLSHRLPTQQLKLSALLHEA*SREVRG Trigger: GCCCCGCACCTCCCTGCTCAAGGCTTCATGGAGCAG...GGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | GCTCTACGCCCAGGCGGGCTCCCTTTTAAGAAGCGATGCAGTTTCAAGCTGCGCCACAGTTCCAAGTCATaGCAGAGCTGTGGGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALRPGGLPFKKRCSFKLRHSSKS*QSCGSE Trigger: CTCGGACCCACAGCTCTGCAATGACTTGGAACTGTG...GCGCAGCTTGAAACTGCATCGCTTCTTAAAAGGGAGCCCGCCTGGGCGTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 90 bp | AGCCCTGGAGCAGAAGGAAGTAGGGACGGTTGCTGGGTGCCTGAATaGGGCACTGAGTCAACTGATCGAAGTCTCCAGGGTCCGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPGAEGSRDGCWVPE*GTESTDRSLQGPLV Trigger: TACCAACGGACCCTGGAGACTTCGATCAGTTGACTCAGTGCCTCATTCAGGCACCCAGCAACCGTCCCTACTTCCTTCTGCTCCAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | ATCCTGGTAGCCCTGGAGCAGAAGGAAGTAGGGACGGTTGCTGGGTaGCTGAATGAGGCACTGAGTCAACTGATCGAAGTCTCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILVALEQKEVGTVAG*LNEALSQLIEVSRV Trigger: GACCCTGGAGACTTCGATCAGTTGACTCAGTGCCTCATTCAGGCACCCAGCAACCGTCCCTACTTCCTTCTGCTCCAGGGCTACCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | AAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCCAACAACTCAAACTCTCACAGCGCCGCCCCAGTTaGGCGAGCTGTTTCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPIFPLSHRLPTQQLKLSQRRPS*ASCFLG Trigger: CCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTG...TGAGAGTTTGAGTTGTTGGGTTGGTAGACGATGGGACAGTGGGAAGATGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 90 bp | TACATGAACAGGAAATGCTCTCCTAGGCCTAACAGGTCTCCGGGGTaGAGCTCTGCCTCCCGCAGCAAAAGACAGCCATTGTGTGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: YMNRKCSPRPNRSPG*SSASRSKRQPLCVT Trigger: CGTCACACACAATGGCTGTCTTTTGCTGCGGGAGGCAGAGCTGCACCCCGGAGACCTGTTAGGCCTAGGAGAGCATTTCCTGTTCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 90 bp | GCCCGGCCCCCTGAAGCCAATCCAACACAAGATCCAAGTTGGTTCTaGTTTGGACGGCTCGAGACCATTGATAGAAAGGTCGGCCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARPPEANPTQDPSWF*FGRLETIDRKVGLD Trigger: GTCAAGGCCGACCTTTCTATCAATGGTCTCGAGCCGTCCAAATCAGAACCAACTTGGATCTTGTGTTGGATTGGCTTCAGGGGGCCGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | CTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACCGGAGCGGGGGTCCTaGTACATGAACAGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGIHIPSPSSHCPIVYQPERGS*YMNRKC Trigger: GCATTTCCTGTTCATGTACAAGGACCCCCGCTCCGG...TTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 90 bp | AGTTTCCGGAAGAACTCAGTGGCAATGTCACCCAGCCCGGCCCCCTaGAGCCAATCCAACACAAGATCCAAGTTGGTTCTGATTTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SFRKNSVAMSPSPAP*SQSNTRSKLVLIWT Trigger: CGTCCAAATCAGAACCAACTTGGATCTTGTGTTGGATTGGCTTCAGGGGGCCGGGCTGGGTGACATTGCCACTGAGTTCTTCCGGAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 90 bp | CACATAGCAGGTTCACAGCAATGGAAAGTTTCCGGAAGAACTCAGTaGCAATGTCACCCAGCCCGGCCCCCTGAAGCCAATCCAACACAA | + |
|
Preference number: 5 (lower is better) Translates to: HIAGSQQWKVSGRTQ*QCHPARPPEANPTQ Trigger: TTGTGTTGGATTGGCTTCAGGGGGCCGGGCTGGGTGACATTGCCACTGAGTTCTTCCGGAAACTTTCCATTGCTGTGAACCTGCTATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | TTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAACTGTTTCCTTGGGGAATaGATCCACAGGCCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLAFTSQAHLPTVPSSTNCFLGE*IHRPTG Trigger: TCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACA...GTTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | CTTCTTGGCATTCACATCCCAAGCCCATCTTCCCACTGTCCCATCGTCTACCAAAGGATGTCTGGGGCGTaGAGGAAGGTGTCCACATAT | + |
|
Preference number: 5 (lower is better) Translates to: LLGIHIPSPSSHCPIVYQRMSGA*RKVSTY Trigger: ATATGTGGACACCTTCCTCAACGCCCCAGACATCCT...TTGGTAGACGATGGGACAGTGGGAAGATGGGCTTGGGATGTGAATGCCAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS-3UTR CAA 90 bp | TCGTCTACCAACCCAACAACTCAAACTCTCAGCCGTCTACGCAGGGAAAACTACAACACAAGATCCAAGTaGGTTCTGATTTGGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTNPTTQTLSRLRRENYNTRSK*VLIWTA Trigger: AGCCGTCCAAATCAGAACCAACTTGGATCTTGTGTT...GTAGTTTTCCCTGCGTAGACGGCTGAGAGTTTGAGTTGTTGGGTTGGTAGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | AGCAGAGGGCGCTCCGCGTCGGCCAACACCCGCAGGTaGTCGGCACGCCACTCGCCTCCGCCCACGCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: SRGRSASANTRR*SARHSPPPTPT Trigger: GGTCGGCGTGGGCGGAGGCGAGTGGCGTGCCGAGCACCTGCGGGTGTTGGCCGACGCGGAGCGCCCTCTGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | TTTGTGCCGTCTGCATCCGCAGCCCCGAAGGCCTCCTaGTCCAGCCGTCGAGCCTCCTCGCGGCCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FVPSASAAPKAS*SSRRASSRPRS Trigger: GCTGCGCGGCCGCGAGGAGGCTCGACGGCTGGAGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | CAGCAGAGTGGCTGGCCCGAGCGGGGGCAGGTCCCCTaGTCCCGAGGCTGCAGCTCGCACGATCTCGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: QQSGWPERGQVP*SRGCSSHDLAQ Trigger: TTGGGCGAGATCGTGCGAGCTGCAGCCTCGGGAGCAGGGGACCTGCCCCCGCTCGGGCCAGCCACTCTGCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | CTACACCCGCCGCCAGTTCAGGCAGCTTCTTCTCGCTaGCCCAGCGCTGCGCGCCCCCAGGCGTGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LHPPPVQAASSR*PSAARPQACQD Trigger: GTCCTGGCACGCCTGGGGGCGCGCAGCGCTGGGCCAGCGAGAAGAAGCTGCCTGAACTGGCGGCGGGTGTAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | AGTTGGCGCCCGACGCCAGCCCAGAAGCGAAGATCTTaGGCACTCCCGGGGGCACCGCGGCACGCGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SWRPTPAQKRRS*ALPGAPRHAWA Trigger: TGCCCACGCGTGCCGCGGTGCCCCCGGGAGTGCTCAAGATCTTCGCTTCTGGGCTGGCGTCGGGCGCCAACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | CAGTGGGGGTCCCGGATCCTGATCCTGGACCAGGACTaGCCAGAGCTGCCCCGCCAGATGCTGCCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: QWGSRILILDQD*PELPRQMLPET Trigger: GGTCTCGGGCAGCATCTGGCGGGGCAGCTCTGGCCAGTCCTGGTCCAGGATCAGGATCCGGGACCCCCACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | CTTCTGGGTCCGCCAAGATGGGGCGTTTGTGCCGTCTaGATCCGCAGCCCCGAAGGCCTCCTGCTCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: LLGPPRWGVCAV*IRSPEGLLLQP Trigger: CGGCTGGAGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAACGCCCCATCTTGGCGGACCCAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | CGATCTCGCCCAACAGCGCCTCTTCCTCTCGTGGTCTaGACCGCAGCACCGGCTCGCGGCCATCCAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RSRPTAPLPLVV*TAAPARGHPGR Trigger: CCTACCTGGATGGCCGCGAGCCGGTGCTGCGGTTCAGACCACGAGAGGAAGAGGCGCTGTTGGGCGAGATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | CCGCGGGACGAGGAGGGCCCACCCCGGCCGAACACGTaGTGCTCTCGTGTCATGACATACACCACGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRDEEGPPRPNT*CSRVMTYTTKS Trigger: GGACTTCGTGGTGTATGTCATGACACGAGAGCAGCACGTGTTCGGCCGGGGTGGGCCCTCCTCGTCCCGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | TCGCACGATCTCGCCCAACAGCGCCTCTTCCTCTCGTaGTCTGAACCGCAGCACCGGCTCGCGGCCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: SHDLAQQRLFLS*SEPQHRLAAIQ Trigger: CTGGATGGCCGCGAGCCGGTGCTGCGGTTCAGACCACGAGAGGAAGAGGCGCTGTTGGGCGAGATCGTGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | GAGGAGGCGACGGAGCCTGCGCAGTTCTCTATGCAATaGGTCATCTGTCACAGGGCCGGTGAGGCGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: EEATEPAQFSMQ*VICHRAGEAQA Trigger: CGCCTGCGCCTCACCGGCCCTGTGACAGATGACGCATTGCATAGAGAACTGCGCAGGCTCCGTCGCCTCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | GCCCGCGCGCACCGTGCAATGTCGAGGCAGGATGTCTaGGGCGTTGAGGAAGGTGTCCACATATGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARAHRAMSRQDV*GVEEGVHIWGW Trigger: CCAGCCCCATATGTGGACACCTTCCTCAACGCCCCAGACATCCTGCCTCGACATTGCACGGTGCGCGCGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 90 bp | CTGGGCCAGCGCCGCCCCAGTTTGGCGAGCTGTTTCCTTGGGGAATaGATCCACAGGCCCACTGGAAGATGGAGCTTCCCGAAGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LGQRRPSLASCFLGE*IHRPTGRWSFPKRG Trigger: CCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTGGCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | TGGACCAGGACTGGCCAGAGCTGCCCCGCCAGATGCTaGCCGAGACCTATTCTTCTGGGTCCGCCAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: WTRTGQSCPARC*PRPILLGPPRW Trigger: CCATCTTGGCGGACCCAGAAGAATAGGTCTCGGGCAGCATCTGGCGGGGCAGCTCTGGCCAGTCCTGGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | TCCCAGAGGAGGCGACGGAGCCTGCGCAGTTCTCTATaGAATGCGTCATCTGTCACAGGGCCGGTGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SQRRRRSLRSSL*NASSVTGPVRR Trigger: GCGCCTCACCGGCCCTGTGACAGATGACGCATTGCATAGAGAACTGCGCAGGCTCCGTCGCCTCCTCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | AGGGTCCGTTGGTACCATCTGAGCATCAGCTGCCCCTaGGGCCATGCTAAGGGCCTGCTGCCTGCGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVRWYHLSISCP*GHAKGLLPAFL Trigger: CAGGAACGCAGGCAGCAGGCCCTTAGCATGGCCCCAGGGGCAGCTGATGCTCAGATGGTACCAACGGACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | GGCCGAGCGGGCCCAGAACCCCCGGAGCGGGGGTCCTaGTACATGAACAGGAAATGCTCTCCTAGGCCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRAGPEPPERGS*YMNRKCSPRPN Trigger: GTTAGGCCTAGGAGAGCATTTCCTGTTCATGTACAAGGACCCCCGCTCCGGGGGTTCTGGGCCCGCTCGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 90 bp | GACGAGGACTTGACAGAGGCAGCGCTGGGCCAGCGCCGCCCCAGTTaGGCGAGCTGTTTCCTTGGGGAATTGATCCACAGGCCCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DEDLTEAALGQRRPS*ASCFLGELIHRPTG Trigger: TCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTGGCCCAGCGCTGCCTCTGTCAAGTCCTCGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 90 bp | AGCCAAGATGGCCGAGCGGGCCCAGAACCCCCGGAGCGGGGGTCCTaGTACATGAACAGGAAATGCTCTCCTAGGCCTAACAGGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SQDGRAGPEPPERGS*YMNRKCSPRPNRSP Trigger: CGGAGACCTGTTAGGCCTAGGAGAGCATTTCCTGTTCATGTACAAGGACCCCCGCTCCGGGGGTTCTGGGCCCGCTCGGCCATCTTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | ACCTATTCTTCTGGGTCCGCCAAGATGGGGCGTTTGTaGCGTCTGCATCCGCAGCCCCGAAGGCCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TYSSGSAKMGRL*RLHPQPRRPPA Trigger: AGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAACGCCCCATCTTGGCGGACCCAGAAGAATAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | GGGCCAGCGCCGCCCCAGTTTGGCGAGCTGTTTCCTTaGGGAATTGATCCACAGGCCCACTGGAAGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPAPPQFGELFP*GIDPQAHWKME Trigger: CTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | TGTCGAAGCCACCGGGGGTCCATGGCGATGATTGGCTaGCAGCTCCTGCTGTTCAAGATCCCAGAGGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CRSHRGSMAMIG*QLLLFKIPEEA Trigger: CGCCTCCTCTGGGATCTTGAACAGCAGGAGCTGCCAGCCAATCATCGCCATGGACCCCCGGTGGCTTCGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | TTGACAGAGGCAGCGCTGGGCCAGCGCCGCCCCAGTTaGGCGAGCTGTTTCCTTGGGGAATTGATCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTEAALGQRRPS*ASCFLGELIHR Trigger: CCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTGGCCCAGCGCTGCCTCTGTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 90 bp | ACCTCATCCAGGAGGGCCAAGGCCTCATCACACAGTTCCAAGTCATaGCAGAGCTGTGGGTCCGAGGACAGGCCCTCCTGGTCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSSRRAKASSHSSKS*QSCGSEDRPSWSAS Trigger: GGAGGCTGACCAGGAGGGCCTGTCCTCGGACCCACAGCTCTGCAATGACTTGGAACTGTGTGATGAGGCCTTGGCCCTCCTGGATGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | GCCCACCCCGGCCGAACACGTGCTGCTCTCGTGTCATaGCATACACCACGAAGTCCTGAGCATCCTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AHPGRTRAALVS*HTPRSPEHPGS Trigger: GCTACCAGGATGCTCAGGACTTCGTGGTGTATGTCATGACACGAGAGCAGCACGTGTTCGGCCGGGGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | CGGGCCCAGAACCCCCGGAGCGGGGGTCCTTGTACATaGACAGGAAATGCTCTCCTAGGCCTAACAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAQNPRSGGPCT*TGNALLGLTGL Trigger: GAGACCTGTTAGGCCTAGGAGAGCATTTCCTGTTCATGTACAAGGACCCCCGCTCCGGGGGTTCTGGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | GGAGGGCCAAGGCCTCATCACACAGTTCCAAGTCATTaGAGAGCTGTGGGTCCGAGGACAGGCCCTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGPRPHHTVPSH*RAVGPRTGPPG Trigger: ACCAGGAGGGCCTGTCCTCGGACCCACAGCTCTGCAATGACTTGGAACTGTGTGATGAGGCCTTGGCCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | GAGCTGTTTCCTTGGGGAATTGATCCACAGGCCCACTaGAAGATGGAGCTTCCCGAAGCGGGGGCTTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ELFPWGIDPQAH*KMELPEAGASA Trigger: GGCGGAAGCCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | CGCCGCCCCAGTTTGGCGAGCTGTTTCCTTGGGGAATaGATCCACAGGCCCACTGGAAGATGGAGCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RRPSLASCFLGE*IHRPTGRWSFP Trigger: CGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | GCCGCCCCAGTTTGGCGAGCTGTTTCCTTGGGGAATTaGTCCACAGGCCCACTGGAAGATGGAGCTTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AAPVWRAVSLGN*STGPLEDGASR Trigger: TCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | TTCCTTGGGGAATTGATCCACAGGCCCACTGGAAGATaGAGCTTCCCGAAGCGGGGGCTTCCGCCCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLGELIHRPTGR*SFPKRGLPPSF Trigger: AAAGGAGGGCGGAAGCCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCTGTGGATCAATTCCCCAAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | AAGGTGTCGAAGCCACCGGGGGTCCATGGCGATGATTaGCTGGCAGCTCCTGCTGTTCAAGATCCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KVSKPPGVHGDD*LAAPAVQDPRG Trigger: TCCTCTGGGATCTTGAACAGCAGGAGCTGCCAGCCAATCATCGCCATGGACCCCCGGTGGCTTCGACACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | GGCACTGAGTCAACTGATCGAAGTCTCCAGGGTCCGTaGGTACCATCTGAGCATCAGCTGCCCCTGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTESTDRSLQGP*VPSEHQLPLGP Trigger: TGGCCCCAGGGGCAGCTGATGCTCAGATGGTACCAACGGACCCTGGAGACTTCGATCAGTTGACTCAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | AGGAAATGCTCTCCTAGGCCTAACAGGTCTCCGGGGTaGAGCTCTGCCTCCCGCAGCAAAAGACAGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RKCSPRPNRSPG*SSASRSKRQPL Trigger: CAATGGCTGTCTTTTGCTGCGGGAGGCAGAGCTGCACCCCGGAGACCTGTTAGGCCTAGGAGAGCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | GCACTGAGTCAACTGATCGAAGTCTCCAGGGTCCGTTaGTACCATCTGAGCATCAGCTGCCCCTGGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ALSQLIEVSRVR*YHLSISCPWGH Trigger: ATGGCCCCAGGGGCAGCTGATGCTCAGATGGTACCAACGGACCCTGGAGACTTCGATCAGTTGACTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | TCTGGGACACGAGGTCGGGATGCAGCTCACACTGACTaGTCAGTTCTAGAGCTGCCTGGAACACACCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGTRGRDAAHTD*SVLELPGTHPE Trigger: CTCTGGGTGTGTTCCAGGCAGCTCTAGAACTGACCAGTCAGTGTGAGCTGCATCCCGACCTCGTGTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | AGCTCAACAGCTCTGTGGTGTTGGCCATCCATAGTATaGGTGGTCGCAGCTCCACAGACACAGCCTCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSTALWCWPSIV*VVAAPQTQPQG Trigger: CCCCTGAGGCTGTGTCTGTGGAGCTGCGACCACTCATACTATGGATGGCCAACACCACAGAGCTGTTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | AAAGTCTGGGACACGAGGTCGGGATGCAGCTCACACTaGCTGGTCAGTTCTAGAGCTGCCTGGAACACACCC | + |
|
Preference number: 6 (lower is better) Translates to: KVWDTRSGCSSH*LVSSRAAWNTP Trigger: GGGTGTGTTCCAGGCAGCTCTAGAACTGACCAGTCAGTGTGAGCTGCATCCCGACCTCGTGTCCCAGACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS GCA 72 bp | GCCCTGGAGCAGAAGGAAGTAGGGACGGTTGCTGGGTaGCTGAATGAGGCACTGAGTCAACTGATCGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALEQKEVGTVAG*LNEALSQLIEV Trigger: GACTTCGATCAGTTGACTCAGTGCCTCATTCAGGCACCCAGCAACCGTCCCTACTTCCTTCTGCTCCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | GCAGAAGGAAGTAGGGACGGTTGCTGGGTGCCTGAATaGGGCACTGAGTCAACTGATCGAAGTCTCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AEGSRDGCWVPE*GTESTDRSLQG Trigger: ACCCTGGAGACTTCGATCAGTTGACTCAGTGCCTCATTCAGGCACCCAGCAACCGTCCCTACTTCCTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | GGTTCACAGCAATGGAAAGTTTCCGGAAGAACTCAGTaGCAATGTCACCCAGCCCGGCCCCCTGAAGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GSQQWKVSGRTQ*QCHPARPPEAN Trigger: ATTGGCTTCAGGGGGCCGGGCTGGGTGACATTGCCACTGAGTTCTTCCGGAAACTTTCCATTGCTGTGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | AAGAACTCAGTGGCAATGTCACCCAGCCCGGCCCCCTaGAGCCAATCCAACACAAGATCCAAGTTGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KNSVAMSPSPAP*SQSNTRSKLVL Trigger: CAGAACCAACTTGGATCTTGTGTTGGATTGGCTTCAGGGGGCCGGGCTGGGTGACATTGCCACTGAGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CCA 72 bp | GGGAGGTGCGGGGCACACATAGCAGGTTCACAGCAATaGAAAGTTTCCGGAAGAACTCAGTGGCAATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRCGAHIAGSQQ*KVSGRTQWQCH Trigger: GTGACATTGCCACTGAGTTCTTCCGGAAACTTTCCATTGCTGTGAACCTGCTATGTGTGCCCCGCACCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 90 bp | GGCCCCCTGAAGCCAATCCAACACAAGATCCAAGTTGGTTCTGATTaGGACGGCTCGAGACCATTGATAGAAAGGTCGGCCTTGACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GPLKPIQHKIQVGSD*DGSRPLIERSALTS Trigger: CGAGGTCAAGGCCGACCTTTCTATCAATGGTCTCGAGCCGTCCAAATCAGAACCAACTTGGATCTTGTGTTGGATTGGCTTCAGGGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 90 bp | ATCTCTAGCACTTTCTCCTGTACAAAGCTCAACAGCTCTGTGGTGTaGGCCATCCATAGTATGAGTGGTCGCAGCTCCACAGACACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ISSTFSCTKLNSSVV*AIHSMSGRSSTDTA Trigger: GGCTGTGTCTGTGGAGCTGCGACCACTCATACTATGGATGGCCAACACCACAGAGCTGTTGAGCTTTGTACAGGAGAAAGTGCTAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | ACTTTCTCCTGTACAAAGCTCAACAGCTCTGTGGTGTaGGCCATCCATAGTATGAGTGGTCGCAGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TFSCTKLNSSVV*AIHSMSGRSST Trigger: TGTGGAGCTGCGACCACTCATACTATGGATGGCCAACACCACAGAGCTGTTGAGCTTTGTACAGGAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | ATCCAAGTTGGTTCTGATTTGGACGGCTCGAGACCATaGATAGAAAGGTCGGCCTTGACCTCGTTCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: IQVGSDLDGSRP*IERSALTSFHQ Trigger: CTGATGGAACGAGGTCAAGGCCGACCTTTCTATCAATGGTCTCGAGCCGTCCAAATCAGAACCAACTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS CAA 72 bp | AAGCCAATCCAACACAAGATCCAAGTTGGTTCTGATTaGGACGGCTCGAGACCATTGATAGAAAGGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KPIQHKIQVGSD*DGSRPLIERSA Trigger: GGCCGACCTTTCTATCAATGGTCTCGAGCCGTCCAAATCAGAACCAACTTGGATCTTGTGTTGGATTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | AGAAAGGTCGGCCTTGACCTCGTTCCATCAGTGAGTTaGGAAGGGATGCATTGGAGAAGAAGAACAAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RKVGLDLVPSVS*EGMHWRRRTNS Trigger: GCTATTTGTTCTTCTTCTCCAATGCATCCCTTCTCAACTCACTGATGGAACGAGGTCAAGGCCGACCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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| CDS TCA 72 bp | CCTGAAGCCAATCCAACACAAGATCCAAGTTGGTTCTaGTTTGGACGGCTCGAGACCATTGATAGAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PEANPTQDPSWF*FGRLETIDRKV Trigger: GACCTTTCTATCAATGGTCTCGAGCCGTCCAAATCAGAACCAACTTGGATCTTGTGTTGGATTGGCTTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057927.10 |
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