RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASGRF2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021708

Ensembl transcript IDs: ENSMUST00000151408.9, ENSMUST00000216219.2

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGACTTGGAGGTGTAAACACTGGCCTATGCTTTTCGGTGGGCAGTaGAGAGCTGGGCTGAGACTCATGTCTGGCCCAGTGCTGCTTCAC +
Preference number: 1 (lower is better)
Translates to: ETWRCKHWPMLFGGQ*RAGLRLMSGPVLLH
Trigger: GTGAAGCAGCACTGGGCCAGACATGAGTCTCAGCCCAGCTCTGCACTGCCCACCGAAAAGCATAGGCCAGTGTTTACACCTCCAAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp ATTACATGGGCATGCACTTTACTGAAACCTCCACACTTGGCTTCTTaGGGCCACCAATGTCTCGATGAAGCCCCCACTCAAGTCTGTGGG +
Preference number: 1 (lower is better)
Translates to: ITWACTLLKPPHLAS*GHQCLDEAPTQVCG
Trigger: CCCACAGACTTGAGTGGGGGCTTCATCGAGACATTGGTGGCCCCAAGAAGCCAAGTGTGGAGGTTTCAGTAAAGTGCATGCCCATGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 90 bp GCTGTTTTTAGAGTACATCACTCCTCCCAGGCAAGGAGAACACACTaGGAACCACACCCATGCTGCGTACTGAAACTGCTTCTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: AVFRVHHSSQARRTH*EPHPCCVLKLLLCW
Trigger: CCAGCACAGAAGCAGTTTCAGTACGCAGCATGGGTGTGGTTCTCAGTGTGTTCTCCTTGCCTGGGAGGAGTGATGTACTCTAAAAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp GGAACACAACATTGGAGAAATAGGATCCCAAACTCCCAAGCAAAGTaGACACAGAGTCATCCTCTGAAGGACAGGGACAGGGTGGAGTGG +
Preference number: 1 (lower is better)
Translates to: GTQHWRNRIPNSQAK*TQSHPLKDRDRVEW
Trigger: CCACTCCACCCTGTCCCTGTCCTTCAGAGGATGACTCTGTGTGCACTTTGCTTGGGAGTTTGGGATCCTATTTCTCCAATGTTGTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp GTTTACACCTTCCCACCCCAGCCTGGGGTATCTGTCTTTGGTCCATaGAGCTGGGTTTCACTGTTGCTGGAGACAGATTTACAGTTCAGT +
Preference number: 1 (lower is better)
Translates to: VYTFPPQPGVSVFGP*SWVSLLLETDLQFS
Trigger: ACTGAACTGTAAATCTGTCTCCAGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAGGCTGGGGTGGGAAGGTGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp ATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTaGGGTATCTGTCTTTGGTCCATGGAGCTGGGTTTCACTGTTGCT +
Preference number: 1 (lower is better)
Translates to: ISFPKLQSLHLPTPA*GICLWSMELGFTVA
Trigger: AGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 90 bp GAAGCGATTAAGAGGACTGGTAGAGGTGAGCCCAGGCTAGCAGAGTaGCAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTG +
Preference number: 1 (lower is better)
Translates to: EAIKRTGRGEPRLAE*QRNIAGVLCGTLSL
Trigger: CAAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGCCTGGGCTCACCTCTACCAGTCCTCTTAATCGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp GCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACGGAGGGTaGTGGCAGACAGACATGCATTACACACAATACACAGCACAGACA +
Preference number: 1 (lower is better)
Translates to: AGLPSALTNASANGG*WQTDMHYTQYTAQT
Trigger: TGTCTGTGCTGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp CTTCAAAGTTTACACCTTCCCACCCCAGCCTGGGGTATCTGTCTTTaGTCCATGGAGCTGGGTTTCACTGTTGCTGGAGACAGATTTACA +
Preference number: 1 (lower is better)
Translates to: LQSLHLPTPAWGICL*SMELGFTVAGDRFT
Trigger: TGTAAATCTGTCTCCAGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAGGCTGGGGTGGGAAGGTGTAAACTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp GGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACGGAGGGTGCTaGCAGACAGACATGCATTACACACAATACACAGCACAGACATAC +
Preference number: 1 (lower is better)
Translates to: GLPSALTNASANGGC*QTDMHYTQYTAQTY
Trigger: GTATGTCTGTGCTGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp AGCCTGGGGTATCTGTCTTTGGTCCATGGAGCTGGGTTTCACTGTTaGTGGAGACAGATTTACAGTTCAGTTCCATCTTTGGTGGTGAAA +
Preference number: 1 (lower is better)
Translates to: SLGYLSLVHGAGFHC*WRQIYSSVPSLVVK
Trigger: TTTCACCACCAAAGATGGAACTGAACTGTAAATCTGTCTCCAGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp CTGGGGTATCTGTCTTTGGTCCATGGAGCTGGGTTTCACTGTTGCTaGAGACAGATTTACAGTTCAGTTCCATCTTTGGTGGTGAAAGGA +
Preference number: 1 (lower is better)
Translates to: LGYLSLVHGAGFHCC*RQIYSSVPSLVVKG
Trigger: TCCTTTCACCACCAAAGATGGAACTGAACTGTAAATCTGTCTCCAGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 90 bp AAACTAAAATGTGTAGAGACAGCGGTTCAACACTGTGAAGTAGGGTaGGTGTTTGCCTTGAGCAGACCAGATCAAGGACAGTCAATGGTC +
Preference number: 1 (lower is better)
Translates to: KLKCVETAVQHCEVG*VFALSRPDQGQSMV
Trigger: GACCATTGACTGTCCTTGATCTGGTCTGCTCAAGGCAAACACTCACCCTACTTCACAGTGTTGAACCGCTGTCTCTACACATTTTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp GTCTGCACCCACAACAAAAGGTCCCTCTCTATTTTTGTTCTGTCCTaGTTTAAGATACCAGTGGCCTCTGAAAGGACACCCATTACTTTC +
Preference number: 1 (lower is better)
Translates to: VCTHNKRSLSIFVLS*FKIPVASERTPITF
Trigger: GAAAGTAATGGGTGTCCTTTCAGAGGCCACTGGTATCTTAAAGCAGGACAGAACAAAAATAGAGAGGGACCTTTTGTTGTGGGTGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 90 bp AAAGTGCAAGGGAAGAGGGGAAATGACCAGGCAGGTCAGTCTTCATaGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAATGCCAGG +
Preference number: 1 (lower is better)
Translates to: KVQGKRGNDQAGQSS*SASISIMLVRENAR
Trigger: CCTGGCATTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCCTGGTCATTTCCCCTCTTCCCTTGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 90 bp AAAGTCATTTCTCTTCACAGTATATTACATGGGCATGCACTTTACTaGAACCTCCACACTTGGCTTCTTGGGGCCACCAATGTCTCGATG +
Preference number: 1 (lower is better)
Translates to: KVISLHSILHGHALY*NLHTWLLGATNVSM
Trigger: CATCGAGACATTGGTGGCCCCAAGAAGCCAAGTGTGGAGGTTTCAGTAAAGTGCATGCCCATGTAATATACTGTGAAGAGAAATGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 90 bp TTTCTGGTTCAAACTAAAATGTGTAGAGACAGCGGTTCAACACTGTaGAGTAGGGTGAGTGTTTGCCTTGAGCAGACCAGATCAAGGACA +
Preference number: 1 (lower is better)
Translates to: FLVQTKMCRDSGSTL*SRVSVCLEQTRSRT
Trigger: TGTCCTTGATCTGGTCTGCTCAAGGCAAACACTCACCCTACTTCACAGTGTTGAACCGCTGTCTCTACACATTTTAGTTTGAACCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 90 bp AGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTaGGTTCTAACAGAACACGAGGAGGTTTACCTTCATTCCACTTCA +
Preference number: 1 (lower is better)
Translates to: SDKETLQVFSVVPCP*VLTEHEEVYLHSTS
Trigger: TGAAGTGGAATGAAGGTAAACCTCCTCGTGTTCTGTTAGAACTCAAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp AAAGTACAGCCAATGCTCAATGCTCATAATGAGCCCAAACAGGTTTaGACATCAGAAAATGTTTCTGGAGTACATTGGGGGAAAGGAAAC +
Preference number: 1 (lower is better)
Translates to: KVQPMLNAHNEPKQV*TSENVSGVHWGKGN
Trigger: GTTTCCTTTCCCCCAATGTACTCCAGAAACATTTTCTGATGTGCAAACCTGTTTGGGCTCATTATGAGCATTGAGCATTGGCTGTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp GCACAGCTAGGATCCAGCATCCTATGTTTTCATCATGCATCACGATaGAGCAATCTCTTATTTGAAACCGAAGAGAACAAACAAGCAACT +
Preference number: 1 (lower is better)
Translates to: AQLGSSILCFHHASR*SNLLFETEENKQAT
Trigger: AGTTGCTTGTTTGTTCTCTTCGGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCTGGATCCTAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 90 bp ACAGACATGCATTACACACAATACACAGCACAGACATACGATACATaGATGCATCGTATCCACAAGGACATAGAAAGCTTCAAAGGACAG +
Preference number: 1 (lower is better)
Translates to: TDMHYTQYTAQTYDT*MHRIHKDIESFKGQ
Trigger: CTGTCCTTTGAAGCTTTCTATGTCCTTGTGGATACGATGCATGCATGTATCGTATGTCTGTGCTGTGTATTGTGTGTAATGCATGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGAGGCAGGGTGGGGTTaGAGTCAATGTGGGTACTCC +
Preference number: 2 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTEAGWG*SQCGYS
Trigger: GGAGTACCCACATTGACTCCAACCCCACCCTGCCTC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAAGGGAAGAGGGGAAATaGCCAGGCAGGTCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTREEGK*PGRSVF
Trigger: GAAGACTGACCTGCCTGGTCATTTCCCCTCTTCCCT...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACACCCACAGATGACCACTaGGGGCGTTTCCAACATTCT +
Preference number: 2 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTPTDDH*GRFQHS
Trigger: AGAATGTTGGAAACGCCCCCAGTGGTCATCTGTGGG...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp AGCTGTAAGAAATTCCGAGTAAAGCATTGGCAGTACCCACAGATGACCACTGGGGCTTCTGTGCTGGGCTaGGAAAGAAAGCTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SCKKFRVKHWQYPQMTTGASVLG*ERKLQA
Trigger: AGCCTGAAGCTTTCTTTCTCAGCCCAGCACAGAAGC...CCCAGTGGTCATCTGTGGGTACTGCCAATGCTTTACTCGGAATTTCTTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 90 bp CAGCCTGGGGTATCTGTCTTTGGTCCATGGAGCTGGGTTTCACTGTaGCTGGAGACAGATTTACAGTTCAGTTCCATCTTTGGTGGTGAA +
Preference number: 2 (lower is better)
Translates to: QPGVSVFGPWSWVSL*LETDLQFSSIFGGE
Trigger: TTCACCACCAAAGATGGAACTGAACTGTAAATCTGTCTCCAGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 90 bp TCACAGTATATTACATGGGCATGCACTTTACTGAAACCTCCACACTaGGCTTCTTGGGGCCACCAATGTCTCGATGAAGCCCCCACTCAA +
Preference number: 2 (lower is better)
Translates to: SQYITWACTLLKPPH*ASWGHQCLDEAPTQ
Trigger: TTGAGTGGGGGCTTCATCGAGACATTGGTGGCCCCAAGAAGCCAAGTGTGGAGGTTTCAGTAAAGTGCATGCCCATGTAATATACTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCTTGCCTCACCTAACATaGAAGAAAGGGGACAGCCCT +
Preference number: 2 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPLPHLT*KKGDSP
Trigger: AGGGCTGTCCCCTTTCTTTCATGTTAGGTGAGGCAA...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAACTTTTCGGTGGGCAGTaGAGAGCTGGGCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQLFGGQ*RAGLRL
Trigger: GAGTCTCAGCCCAGCTCTGCACTGCCCACCGAAAAG...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAATGGGCAGTGCAGAGCTaGGCTGAGACTCATGTCTGG +
Preference number: 2 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQWAVQS*AETHVW
Trigger: CCAGACATGAGTCTCAGCCCAGCTCTGCACTGCCCA...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp AGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGAGTTTTTCTCGTGAGCCTTTaGCTGGATATCATCATCACC +
Preference number: 2 (lower is better)
Translates to: SYTISTAYQDPLCLVTGVFLVSL*LDIIIT
Trigger: GGTGATGATGATATCCAGGCAAAGGCTCACGAGAAA...AACTCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR CAA 90 bp CTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTaGCCCCTCACAACACACAGAGAACAGCTACACCATCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: LVTQLQLFKSLINQV*PLTTHREQLHHLHS
Trigger: GCTGTGGAGATGGTGTAGCTGTTCTCTGTGTGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR-3UTR TCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTTTCCAGGCTTGGGTaGAAGGCACACACCCCCTGC +
Preference number: 2 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCFSRLG*KAHTPC
Trigger: GCAGGGGGTGTGTGCCTTTCACCCAAGCCTGGAAAA...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTTCCACAGAATTCCAATaGCCTCAGGAACAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLSTEFQ*PQEQGQ
Trigger: TTGGCCTTGTTCCTGAGGCCATTGGAATTCTGTGGA...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCTTCCCACCCCAGCCTaGGGTATCTGTCTTTGGTCC +
Preference number: 2 (lower is better)
Translates to: SILCFHHASRCSNLLFETLPTPA*GICLWS
Trigger: GGACCAAAGACAGATACCCCAGGCTGGGGTGGGAAG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 90 bp CTCATCTATGTGTCTGCACCCACAACAAAAGGTCCCTCTCTATTTTaGTTCTGTCCTGCTTTAAGATACCAGTGGCCTCTGAAAGGACAC +
Preference number: 2 (lower is better)
Translates to: LIYVSAPTTKGPSLF*FCPALRYQWPLKGH
Trigger: GTGTCCTTTCAGAGGCCACTGGTATCTTAAAGCAGGACAGAACAAAAATAGAGAGGGACCTTTTGTTGTGGGTGCAGACACATAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGTTTTTAATCTTTCATaGCCTGTCCCATTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTVFNLS*PVPLPK
Trigger: TTTGGGCAATGGGACAGGCCATGAAAGATTAAAAAC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAGAACCACACCCATGCTaGGTACTGAAACTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GRSVFMVSINKYHACKRKEPHPC*VLKLLL
Trigger: CAGAAGCAGTTTCAGTACGCAGCATGGGTGTGGTTC...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACCATGGCCTGTCCCATTaGCCAAAGGCTAAAAACAGC +
Preference number: 2 (lower is better)
Translates to: TSYLEAGLPSALTNASANHGLSH*PKAKNS
Trigger: GCTGTTTTTAGCCTTTGGGCAATGGGACAGGCCATG...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp GCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTGATATCATCATCACCTaGCACTGCCCTTCCAATTGG +
Preference number: 2 (lower is better)
Translates to: AVPSPKLVTQLQLFKSLIDIIIT*HCPSNW
Trigger: CCAATTGGAAGGGCAGTGCCAGGTGATGATGATATC...AATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR-3UTR TCA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTCCCAGGCTAGCAGAGTaGCAAAGAAACATTGCAGGT +
Preference number: 2 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFPRLAE*QRNIAG
Trigger: ACCTGCAATGTTTCTTTGTCACTCTGCTAGCCTGGG...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp AGCTGTAAGAAATTCCGAGTAAAGCATTGGCAGTACCCACAGATGACCACTGGGTATATTACATGGGCATaGACTTTACTGAAACCTCCA +
Preference number: 2 (lower is better)
Translates to: SCKKFRVKHWQYPQMTTGYITWA*TLLKPP
Trigger: TGGAGGTTTCAGTAAAGTGCATGCCCATGTAATATA...CCCAGTGGTCATCTGTGGGTACTGCCAATGCTTTACTCGGAATTTCTTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTCCCCGCTGCCATTGCTaGCTTCTTTTAAAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCPRCHC*LLLKQC
Trigger: ACACTGCTTTAAAAGAAGGCAGCAATGGCAGCGGGG...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACTCTGTCTTTGGTCCATaGAGCTGGGTTTCACTGTTG +
Preference number: 2 (lower is better)
Translates to: TSYLEAGLPSALTNASANSVFGP*SWVSLL
Trigger: CAACAGTGAAACCCAGCTCCATGGACCAAAGACAGA...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACAAACTGCTTCTGTGCTaGGCTGAGAAAGAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYKLLLC*AEKESF
Trigger: GAAGCTTTCTTTCTCAGCCCAGCACAGAAGCAGTTT...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAGCTGGGTTTCACTGTTaGTGGAGACAGATTTACAGT +
Preference number: 2 (lower is better)
Translates to: GRSVFMVSINKYHACKRKAGFHC*WRQIYS
Trigger: ACTGTAAATCTGTCTCCAGCAACAGTGAAACCCAGC...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAGTGACAAAGAAACATTaGAGGTGTTCTCTGTGGTAC +
Preference number: 2 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQVTKKH*RCSLWY
Trigger: GTACCACAGAGAACACCTGCAATGTTTCTTTGTCAC...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTCGGAGCCATTACCCCTaGACTTACAGTATTCTTACG +
Preference number: 2 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCRSHYP*TYSILT
Trigger: CGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCG...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAATTGCTAAAGAAAACTaGCAGCATTGTGCTTCAAGC +
Preference number: 2 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQIAKEN*QHCASS
Trigger: GCTTGAAGCACAATGCTGTCAGTTTTCTTTAGCAAT...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACTTAGTACTACACTGTTaGCTAATACGAACCAGCGAA +
Preference number: 2 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYLVLHC*LIRTSE
Trigger: TTCGCTGGTTCGTATTAGCCAACAGTGTAGTACTAA...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAATCTGGAACACAACATTaGAGAAATAGGATCCCAAAC +
Preference number: 2 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQSGTQH*RNRIPN
Trigger: GTTTGGGATCCTATTTCTCCAATGTTGTGTTCCAGA...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 90 bp CACAAGAATGCTAATAACCTTTACTCCTTTTCTGTAAGATCTTGTTaGGCCTGTGAACACCAAGAAACAAGTCACAAGGTATGCACAGCT +
Preference number: 2 (lower is better)
Translates to: HKNANNLYSFSVRSC*ACEHQETSHKVCTA
Trigger: AGCTGTGCATACCTTGTGACTTGTTTCTTGGTGTTCACAGGCCAAACAAGATCTTACAGAAAAGGAGTAAAGGTTATTAGCATTCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCTTAAACAAAGATGGCTaGGACAGGAGAAAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: SILCFHHASRCSNLLFETLNKDG*DRRKGC
Trigger: ACAGCCTTTTCTCCTGTCTCAGCCATCTTTGTTTAA...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACAGTTATATACAAGGATaGCCACTACTGTGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: TSYLEAGLPSALTNASANSYIQG*PLLCRK
Trigger: TTTCCTGCACAGTAGTGGTCATCCTTGTATATAACT...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACACCCACAGATACACTTaGTTTTTAATCTTTCATGGC +
Preference number: 2 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYTHRYT*FLIFHG
Trigger: GCCATGAAAGATTAAAAACCAAGTGTATCTGTGGGT...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACGCCTACATTTCCCCTTaGTTAAAGTCATTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: TSYLEAGLPSALTNASANAYISP*LKSFLF
Trigger: GAAGAGAAATGACTTTAACCAAGGGGAAATGTAGGC...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR TCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACCAGCAATCTCTTATTTaGAACCGAAGAGAACAAACA +
Preference number: 2 (lower is better)
Translates to: TSYLEAGLPSALTNASANQQSLI*NRREQT
Trigger: TGTTTGTTCTCTTCGGTTTCAAATAAGAGATTGCTG...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR GCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTTACCAACAGCACATaGAAGAAAAGCCTCACCAAA +
Preference number: 2 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCFTNST*KKSLTK
Trigger: TTTGGTGAGGCTTTTCTTGCATGTGCTGTTGGTAAA...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTATCAGAAAATGTTTCTaGAGTACATTGGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCIRKCF*STLGER
Trigger: CCTTTCCCCCAATGTACTCCAGAAACATTTTCTGAT...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTGCAGGTCAGTCTTCATaGTCAGCATCAATAAGTATC +
Preference number: 2 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFAGQSS*SASISI
Trigger: GATACTTATTGATGCTGACCATGAAGACTGACCTGC...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACTCACAGTATATTACATaGGCATGCACTTTACTGAAA +
Preference number: 2 (lower is better)
Translates to: TSYLEAGLPSALTNASANSQYIT*ACTLLK
Trigger: TTTCAGTAAAGTGCATGCCCATGTAATATACTGTGA...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 90 bp CTAACAGAACACGAGGAGGTTTACCTTCATTCCACTTCATTACAATaGTTACCAGCATCTCTATATTACATTCCATATACAAATTGTGCC +
Preference number: 2 (lower is better)
Translates to: LTEHEEVYLHSTSLQ*LPASLYYIPYTNCA
Trigger: GGCACAATTTGTATATGGAATGTAATATAGAGATGCTGGTAACAATTGTAATGAAGTGGAATGAAGGTAAACCTCCTCGTGTTCTGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp ACACTGGCCTATGCTTTTCGGTGGGCAGTGCAGAGCTaGGCTGAGACTCATGTCTGGCCCAGTGCTGCTTCA +
Preference number: 3 (lower is better)
Translates to: TLAYAFRWAVQS*AETHVWPSAAS
Trigger: TGAAGCAGCACTGGGCCAGACATGAGTCTCAGCCCAGCTCTGCACTGCCCACCGAAAAGCATAGGCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp GAACCACACCCATGCTGCGTACTGAAACTGCTTCTGTaGTGGGCTGAGAAAGAAAGCTTCAGGCTGGCCATG +
Preference number: 3 (lower is better)
Translates to: EPHPCCVLKLLL*WAEKESFRLAM
Trigger: CATGGCCAGCCTGAAGCTTTCTTTCTCAGCCCAGCACAGAAGCAGTTTCAGTACGCAGCATGGGTGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp CCACACCCATGCTGCGTACTGAAACTGCTTCTGTGCTaGGCTGAGAAAGAAAGCTTCAGGCTGGCCATGATG +
Preference number: 3 (lower is better)
Translates to: PHPCCVLKLLLC*AEKESFRLAMM
Trigger: CATCATGGCCAGCCTGAAGCTTTCTTTCTCAGCCCAGCACAGAAGCAGTTTCAGTACGCAGCATGGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp TTCCCACCCCAGCCTGGGGTATCTGTCTTTGGTCCATaGAGCTGGGTTTCACTGTTGCTGGAGACAGATTTA +
Preference number: 3 (lower is better)
Translates to: FPPQPGVSVFGP*SWVSLLLETDL
Trigger: TAAATCTGTCTCCAGCAACAGTGAAACCCAGCTCCATGGACCAAAGACAGATACCCCAGGCTGGGGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp CCGAGTAAAGCATTGGCAGTACCCACAGATGACCACTaGGGGCGTTTCCAACATTCTGGGAACAAGCTCCAT +
Preference number: 3 (lower is better)
Translates to: PSKALAVPTDDH*GRFQHSGNKLH
Trigger: ATGGAGCTTGTTCCCAGAATGTTGGAAACGCCCCCAGTGGTCATCTGTGGGTACTGCCAATGCTTTACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp GCAGATGAGAAAAGTGAGACTTGGAGGTGTAAACACTaGCCTATGCTTTTCGGTGGGCAGTGCAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: ADEKSETWRCKH*PMLFGGQCRAG
Trigger: CCCAGCTCTGCACTGCCCACCGAAAAGCATAGGCCAGTGTTTACACCTCCAAGTCTCACTTTTCTCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp GGAGAACACACTGAGAACCACACCCATGCTGCGTACTaGAACTGCTTCTGTGCTGGGCTGAGAAAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: GEHTENHTHAAY*NCFCAGLRKKA
Trigger: AGCTTTCTTTCTCAGCCCAGCACAGAAGCAGTTTCAGTACGCAGCATGGGTGTGGTTCTCAGTGTGTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp AGAGTACATCACTCCTCCCAGGCAAGGAGAACACACTaGGAACCACACCCATGCTGCGTACTGAAACTGCTT +
Preference number: 3 (lower is better)
Translates to: RVHHSSQARRTH*EPHPCCVLKLL
Trigger: AAGCAGTTTCAGTACGCAGCATGGGTGTGGTTCTCAGTGTGTTCTCCTTGCCTGGGAGGAGTGATGTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp TGTGTAGAGACAGCGGTTCAACACTGTGAAGTAGGGTaGGTGTTTGCCTTGAGCAGACCAGATCAAGGACAG +
Preference number: 3 (lower is better)
Translates to: CVETAVQHCEVG*VFALSRPDQGQ
Trigger: CTGTCCTTGATCTGGTCTGCTCAAGGCAAACACTCACCCTACTTCACAGTGTTGAACCGCTGTCTCTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp AACAGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGATTTTCACTTCGGACATaGTCCCTGCTCTTATGTGCA +
Preference number: 3 (lower is better)
Translates to: NSYTISTAYQDPLCLVTGFSLRT*SLLLCA
Trigger: TGCACATAAGAGCAGGGACAATGTCCGAAGTGAAAA...TCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR-3UTR CAA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCCCACTTTTCCAGGCTaGGGTGAAAGGCACACACCC +
Preference number: 3 (lower is better)
Translates to: SILCFHHASRCSNLLFETPTFPG*GERHTP
Trigger: GGGTGTGTGCCTTTCACCCAAGCCTGGAAAAGTGGG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp ATGCATCTGCTAACGGAGGGTGCTGGCAGACAGACATaGATTACACACAATACACAGCACAGACATACGATA +
Preference number: 3 (lower is better)
Translates to: MHLLTEGAGRQT*ITHNTQHRHTI
Trigger: TATCGTATGTCTGTGCTGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp CCAAGTGCTCTAACAAATGCATCTGCTAACGGAGGGTaGTGGCAGACAGACATGCATTACACACAATACACA +
Preference number: 3 (lower is better)
Translates to: PSALTNASANGG*WQTDMHYTQYT
Trigger: TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGCATTTGTTAGAGCACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp AGTGCTCTAACAAATGCATCTGCTAACGGAGGGTGCTaGCAGACAGACATGCATTACACACAATACACAGCA +
Preference number: 3 (lower is better)
Translates to: SALTNASANGGC*QTDMHYTQYTA
Trigger: TGCTGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGCATTTGTTAGAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAAGTTCAGTTCCATCTTaGGTGGTGAAAGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQSSVPS*VVKGGR
Trigger: CCTGCCTCCTTTCACCACCAAAGATGGAACTGAACT...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTTCCACACTTGGCTTCTaGGGGCCACCAATGTCTCGA +
Preference number: 3 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFSTLGF*GPPMSR
Trigger: TCGAGACATTGGTGGCCCCAAGAAGCCAAGTGTGGA...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp TCTCTTCACAGTATATTACATGGGCATGCACTTTACTaGAACCTCCACACTTGGCTTCTTGGGGCCACCAAT +
Preference number: 3 (lower is better)
Translates to: SLHSILHGHALY*NLHTWLLGATN
Trigger: ATTGGTGGCCCCAAGAAGCCAAGTGTGGAGGTTTCAGTAAAGTGCATGCCCATGTAATATACTGTGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp CAAACTAAAATGTGTAGAGACAGCGGTTCAACACTGTaGAGTAGGGTGAGTGTTTGCCTTGAGCAGACCAGA +
Preference number: 3 (lower is better)
Translates to: QTKMCRDSGSTL*SRVSVCLEQTR
Trigger: TCTGGTCTGCTCAAGGCAAACACTCACCCTACTTCACAGTGTTGAACCGCTGTCTCTACACATTTTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp CACAACAAAAGGTCCCTCTCTATTTTTGTTCTGTCCTaGTTTAAGATACCAGTGGCCTCTGAAAGGACACCC +
Preference number: 3 (lower is better)
Translates to: HNKRSLSIFVLS*FKIPVASERTP
Trigger: GGGTGTCCTTTCAGAGGCCACTGGTATCTTAAAGCAGGACAGAACAAAAATAGAGAGGGACCTTTTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp GGGAAGAGGGGAAATGACCAGGCAGGTCAGTCTTCATaGTCAGCATCAATAAGTATCATGCTTGTAAGAGAA +
Preference number: 3 (lower is better)
Translates to: GKRGNDQAGQSS*SASISIMLVRE
Trigger: TTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCCTGGTCATTTCCCCTCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp CACTACTGTGCAGGAAATGTACCTTCCCTAGTTCTATaGTACATTACCAATGGTAGCTCTGAAGCCAGCAAG +
Preference number: 3 (lower is better)
Translates to: HYCAGNVPSLVL*YITNGSSEASK
Trigger: CTTGCTGGCTTCAGAGCTACCATTGGTAATGTACCATAGAACTAGGGAAGGTACATTTCCTGCACAGTAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCTGGGGTATCTGTCTTaGGTCCATGGAGCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: SILCFHHASRCSNLLFETLGYLS*VHGAGF
Trigger: AAACCCAGCTCCATGGACCAAAGACAGATACCCCAG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp ATGGCCACTGAATTGCATTACTCTTTAGGTAAGATATaGTGTCTGCTGACCCACGGTTTTGCCTCACCTAAC +
Preference number: 3 (lower is better)
Translates to: MATELHYSLGKI*CLLTHGFASPN
Trigger: GTTAGGTGAGGCAAAACCGTGGGTCAGCAGACATCATATCTTACCTAAAGAGTAATGCAATTCAGTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp AATCCCCACAGAATGCTCGCTTTAAAGTACAGCCAATaGTCAATGCTCATAATGAGCCCAAACAGGTTTGCA +
Preference number: 3 (lower is better)
Translates to: NPHRMLALKYSQ*SMLIMSPNRFA
Trigger: TGCAAACCTGTTTGGGCTCATTATGAGCATTGAGCATTGGCTGTACTTTAAAGCGAGCATTCTGTGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp TTGCACTTTGAAATAAATGCTGAGGAGGGATATGCATaGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACA +
Preference number: 3 (lower is better)
Translates to: LHFEINAEEGYA*SGCSFSKACDT
Trigger: TGTGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACTGTGGTACCTTGTCCTaGAGTTCTAACAGAACACGA +
Preference number: 3 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYCGTLS*SSNRTR
Trigger: TCGTGTTCTGTTAGAACTCAAGGACAAGGTACCACA...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp CCTTTACTCCTTTTCTGTAAGATCTTGTTTGGCCTGTaGACACCAAGAAACAAGTCACAAGGTATGCACAGC +
Preference number: 3 (lower is better)
Translates to: PLLLFCKILFGL*TPRNKSQGMHS
Trigger: GCTGTGCATACCTTGTGACTTGTTTCTTGGTGTTCACAGGCCAAACAAGATCTTACAGAAAAGGAGTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp TCTCTATTTTTGTTCTGTCCTGCTTTAAGATACCAGTaGCCTCTGAAAGGACACCCATTACTTTCCACCAAC +
Preference number: 3 (lower is better)
Translates to: SLFLFCPALRYQ*PLKGHPLLSTN
Trigger: GTTGGTGGAAAGTAATGGGTGTCCTTTCAGAGGCCACTGGTATCTTAAAGCAGGACAGAACAAAAATAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTAGCTGGGTTTCACTGTaGCTGGAGACAGATTTACAG +
Preference number: 3 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFSWVSL*LETDLQ
Trigger: CTGTAAATCTGTCTCCAGCAACAGTGAAACCCAGCT...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR TCA 72 bp ATAAGTACATTTACTTCCTCTGCAAAAGAGAGCTGCTaGGAATGGCAGTTACCTCACAACTGTACAGCACTT +
Preference number: 3 (lower is better)
Translates to: ISTFTSSAKESC*EWQLPHNCTAL
Trigger: AAGTGCTGTACAGTTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp CATTACACACAATACACAGCACAGACATACGATACATaGATGCATCGTATCCACAAGGACATAGAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: HYTQYTAQTYDT*MHRIHKDIESF
Trigger: GAAGCTTTCTATGTCCTTGTGGATACGATGCATGCATGTATCGTATGTCTGTGCTGTGTATTGTGTGTAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAAGTGACAAAGAAACATaGCAGGTGTTCTCTGTGGTA +
Preference number: 3 (lower is better)
Translates to: GRSVFMVSINKYHACKRKSDKET*QVFSVV
Trigger: TACCACAGAGAACACCTGCAATGTTTCTTTGTCACT...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp CCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGTATGTGCAAGATTTTTaGAGGAGTGCCACTTTCTCG +
Preference number: 3 (lower is better)
Translates to: PSPKLVTQLQLFKSLINQYVQDF*RSATFS
Trigger: CGAGAAAGTGGCACTCCTCAAAAAATCTTGCACATA...CTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACTACCCACAGATACACTaGGTTTTTAATCTTTCATGG +
Preference number: 3 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYYPQIH*VFNLSW
Trigger: CCATGAAAGATTAAAAACCAAGTGTATCTGTGGGTA...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CCA 72 bp ATGTGCATTCCTGCCTTGGATAATCCACACATGATCTaGTTCTCTTTAGCTCTAACAAGCTGTAAGAAATTC +
Preference number: 3 (lower is better)
Translates to: MCIPALDNPHMI*FSLALTSCKKF
Trigger: GAATTTCTTACAGCTTGTTAGAGCTAAAGAGAACCAGATCATGTGTGGATTATCCAAGGCAGGAATGCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR-3UTR CAA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTGCAGCAATCTCTTATTaGAAACCGAAGAGAACAAAC +
Preference number: 3 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCAAISY*KPKRTN
Trigger: GTTTGTTCTCTTCGGTTTCAAATAAGAGATTGCTGC...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR GCA 72 bp AGCCTGGCTAAAAACCATATAGTACATTATCTTTTATaGTGTTTCCCGACCATTGTAAGAATGATAACCCTT +
Preference number: 3 (lower is better)
Translates to: SLAKNHIVHYLL*CFPTIVRMITL
Trigger: AAGGGTTATCATTCTTACAATGGTCGGGAAACAGCATAAAAGATAATGTACTATATGGTTTTTAGCCAGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp AGCTGTAAGAAATTCCGAGTAAAGCATTGGCAGTACCCACAGATGACCACTGGGGGCGCCTGCGGGTCCTaGGTTGGTCCTGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SCKKFRVKHWQYPQMTTGGACGS*VGPGWC
Trigger: GCACCACCCAGGACCAACGCAGGACCCGCAGGCGCC...CCCAGTGGTCATCTGTGGGTACTGCCAATGCTTTACTCGGAATTTCTTACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp ATGCTGAGGAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACCTTGCGCGCCAGCATaGCCAGGTACAGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: MLRRDMHGQAVPSPKLVTPCAPA*PGTGRA
Trigger: GGCACGCCCTGTACCTGGCCATGCTGGCGCGCAAGG...TGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTCCTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCTCAGTGTCGTCTTTGTaGAGACGGGCATCAGACTTA +
Preference number: 4 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGSVSSL*RRASDL
Trigger: TAAGTCTGATGCCCGTCTTCACAAAGACGACACTGA...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCCAAGCAGGTATTGTATaGCCTTTGGCTGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGQAGIV*PLAAGL
Trigger: TAGACCAGCAGCCAAAGGTCATACAATACCTGCTTG...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCGAACCACTTCTCGTaGCAGCGGCTCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EGYAWSGCSFSKACDTASANHFS*QRLASA
Trigger: TGCAGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGC...TGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp GCTAACTTCTTGCACTTTGAAATAAATGCTGAGGAGGGATATGCATGGTCAGGCGGCGCCTGCGGGTCCTaGGTTGGTCCTGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ANFLHFEINAEEGYAWSGGACGS*VGPGWC
Trigger: GCACCACCCAGGACCAACGCAGGACCCGCAGGCGCC...GCCTGACCATGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAAGAAGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp AACAGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGACACTCTTTCCCGGCCTaGTCCTCCTCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NSYTISTAYQDPLCLVTGHSFPA*SSSQRS
Trigger: GCTGCGCTGTGAGGAGGAGCAGGCCGGGAAAGAGTG...TCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACACTTCTTGGAGCTGGCTaGCATGCGCAGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTLLGAG*HAQGPE
Trigger: CTCAGGCCCCTGCGCATGGCAGCCAGCTCCAAGAAG...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCCAGGATGTTCGCCGTTaGTTTCCTTTCTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGQDVRR*FPFLRK
Trigger: CTTCCTCAAGAAAGGAAAGCAACGGCGAACATCCTG...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCATCAGGAAGCCGCGTTTaGTGCCCTCCTTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: EGYAWSGCSFSKACDTASSGSRV*CPPCAP
Trigger: TGGCGCGCAAGGAGGGCACCAAACGCGGCTTCCTGA...TGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp CAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTACTGCGGGTCCTGCGTTaGTCCTGGGTGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QAVPSPKLVTQLQLFKSLLRVLR*SWVVQA
Trigger: CGCCTGCACCACCCAGGACCAACGCAGGACCCGCAG...TAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACATGTGGTCCAGGAGAGTaGTCTGCTCGGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTCGPGE*SARPAP
Trigger: TGGAGCTGGCCGAGCAGATCACTCTCCTGGACCACA...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TCTCGTGAGCCTTTGCCTGGATATCATCATCACCTGGCACTGCCCTTCCAATTGCTCTCCACATGTTCATaGGGGGTGTGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SREPLPGYHHHLALPFQLLSTCS*GVWARS
Trigger: ACTCCTGGCCCACACCCCCCATGAACATGTGGAGAG...CAATTGGAAGGGCAGTGCCAGGTGATGATGATATCCAGGCAAAGGCTCACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp TGTGGTGTGCTCGGAGCCATTACCCCTGCACTTACAGTATTCTTACGCAAAATGGACAGCAGTGTGCGGTaGTGGGGATGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CGVLGAITPALTVFLRKMDSSVR*WGCSRA
Trigger: AGCCCTGCTGCATCCCCACCACCGCACACTGCTGTC...CATTTTGCGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCGAGCACACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCGTATTGTATGACCTTTaGCTGCTGGTCTATGCGGTA +
Preference number: 4 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGVLYDL*LLVYAV
Trigger: TACCGCATAGACCAGCAGCCAAAGGTCATACAATAC...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp TGTGGTGTGCTCGGAGCCATTACCCCTGCACTTACAGTATTCTTACGCAAAATGGGATCCTCCTCCTCTTaGTGGACGTGGTACGGACGC +
Preference number: 4 (lower is better)
Translates to: CGVLGAITPALTVFLRKMGSSSS*WTWYGR
Trigger: GCGTCCGTACCACGTCCATCAAGAGGAGGAGGATCC...CATTTTGCGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCGAGCACACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TGTGGTGTGCTCGGAGCCATTACCCCTGCACTTACAGTATTCTTACGCAAAATGCAGGGCTGTGGGTGGTaGTGGTGGGACTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGVLGAITPALTVFLRKMQGCGW*WWDYWK
Trigger: CTTCCAGTAGTCCCACCACCACCACCCACAGCCCTG...CATTTTGCGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCGAGCACACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TGTGGTGTGCTCGGAGCCATTACCCCTGCACTTACAGTATTCTTACGCAAAATGGATGCAGCAGGGCTGTaGGTGGTGGTGGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: CGVLGAITPALTVFLRKMDAAGL*VVVVGL
Trigger: TAGTCCCACCACCACCACCCACAGCCCTGCTGCATC...CATTTTGCGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCGAGCACACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGCTCGGCCAGCTCCATaGCTGACAACGTCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTARPAP*LTTSQS
Trigger: GCTTTGAGACGTTGTCAGCCATGGAGCTGGCCGAGC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp ACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGCCCCTCACAACAGGAAGCCGCGTTTGGTaGCCTCCTTGCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TQLQLFKSLINQVLPLTTGSRVW*PPCAPA
Trigger: TGCTGGCGCGCAAGGAGGGCACCAAACGCGGCTTCC...TGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp AGCTGTAAGAAATTCCGAGTAAAGCATTGGCAGTACCCACAGATGACCACTGGGTCCAGGAGAGTGATCTaGTCGGCCAGCTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: SCKKFRVKHWQYPQMTTGSRRVI*SASSMA
Trigger: AGCCATGGAGCTGGCCGAGCAGATCACTCTCCTGGA...CCCAGTGGTCATCTGTGGGTACTGCCAATGCTTTACTCGGAATTTCTTACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTTTGGCTGCTGGTCTATaGGGTAAGCGGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPLAAGL*GKRSAG
Trigger: TCCAGCAGACCGCTTACCGCATAGACCAGCAGCCAA...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCCTCTCCACATGTTCATaGGGGGTGTGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPLSTCS*GVWARS
Trigger: ACTCCTGGCCCACACCCCCCATGAACATGTGGAGAG...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCACGGCCTCCACCATCGTaGACACAATCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EGYAWSGCSFSKACDTASRPPPS*TQSGFS
Trigger: AGAGAAACCAGATTGTGTTCACGATGGTGGAGGCCG...TGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAGGAAGCCGCGTTTGGTaGCCTCCTTGCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRSVFMVSINKYHACKRKGSRVW*PPCAPA
Trigger: TGCTGGCGCGCAAGGAGGGCACCAAACGCGGCTTCC...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCCTTGCGCGCCAGCATaGCCAGGTACAGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETPCAPA*PGTGRA
Trigger: GGCACGCCCTGTACCTGGCCATGCTGGCGCGCAAGG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCAAGGTACATGCCCGCTaGCCGGCCGCTCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETKVHAR*PAALLA
Trigger: GGCGAGCAGAGCGGCCGGCCAGCGGGCATGTACCTT...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTCTGCGGGTCCTGCGTTaGTCCTGGGTGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFLRVLR*SWVVQA
Trigger: CGCCTGCACCACCCAGGACCAACGCAGGACCCGCAG...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGATGTCGGAGTTGGTTaGTGGCGATCTTCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: EGYAWSGCSFSKACDTASDVGVG*WRSSRS
Trigger: AGACCGAGAAGATCGCCACCAACCAACTCCGACATC...TGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTCACAGCCAGGGGAGGTaGGGAAGAGAACTTGCGACA +
Preference number: 4 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLHSQGR*GRELAT
Trigger: TGTCGCAAGTTCTCTTCCCCACCTCCCCTGGCTGTG...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTGGCTGTGGGTGGTGGTaGTGGGACTACTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLGCGWW*WDYWKM
Trigger: CATCTTCCAGTAGTCCCACCACCACCACCCACAGCC...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACATCCACAGAAGGCACTTaGATAAGGGAACCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTSTEGT*IREPCR
Trigger: CCGACAAGGTTCCCTTATTCAAGTGCCTTCTGTGGA...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACATCCTGGGCATGCTTTaGGACCCAGTGGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYILGML*DPVAED
Trigger: GTCCTCCGCCACTGGGTCTCAAAGCATGCCCAGGAT...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACCACTCTTTCCCGGCCTaGTCCTCCTCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TSYLEAGLPSALTNASANHSFPA*SSSQRS
Trigger: GCTGCGCTGTGAGGAGGAGCAGGCCGGGAAAGAGTG...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACTCAGGAAGCCGCGTTTaGTGCCCTCCTTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: TSYLEAGLPSALTNASANSGSRV*CPPCAP
Trigger: TGGCGCGCAAGGAGGGCACCAAACGCGGCTTCCTGA...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAAAATGTCCGCGTAACTaGCTTGGTGAATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTKCPRN*LGEWPP
Trigger: TGGAGGCCATTCACCAAGCCAGTTACGCGGACATTT...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp CAGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGAGTCCTCACAGGCAGGGTTaGCTTCATACTGCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: QLHHLHSLSGSTVSGNWSPHRQG*LHTALR
Trigger: TCTTAAAGCAGTATGAAGCCAACCCTGCCTGTGAGG...ACTCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGCGGTCTGCTGGAACTaGCGTATCTCTCGAATAATG +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTAVCWN*RISRIM
Trigger: CATTATTCGAGAGATACGCCAGTTCCAGCAGACCGC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp CAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTACCGACCTGTCCTCCTTaGAGCTGTAGAGAATGTCCG +
Preference number: 4 (lower is better)
Translates to: QAVPSPKLVTQLQLFKSLPTCPP*SCRECP
Trigger: CGGACATTCTCTACAGCTCCAAGGAGGACAGGTCGG...TAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR CAA 72 bp TGTTGCTGGAGACAGATTTACAGTTCAGTTCCATCTTaGGTGGTGAAAGGAGGCAGGTGTTGTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CCWRQIYSSVPS*VVKGGRCCPSG
Trigger: CCCAGAGGGACAACACCTGCCTCCTTTCACCACCAAAGATGGAACTGAACTGTAAATCTGTCTCCAGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp ATTACATGGGCATGCACTTTACTGAAACCTCCACACTaGGCTTCTTGGGGCCACCAATGTCTCGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: ITWACTLLKPPH*ASWGHQCLDEA
Trigger: GGCTTCATCGAGACATTGGTGGCCCCAAGAAGCCAAGTGTGGAGGTTTCAGTAAAGTGCATGCCCATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCTCAATGTACACTGAATaGGGGAGAGAACCCCACCTG +
Preference number: 4 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPSMYTE*GREPHL
Trigger: CAGGTGGGGTTCTCTCCCTCATTCAGTGTACATTGA...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGGGACTACTGGAAGATaGGGAATTAGTCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTGTTGR*GISQVQ
Trigger: TTGGACCTGACTAATTCCTCATCTTCCAGTAGTCCC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAACCAGCGGCTCGCCTCTaGAGCCTTCTTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GRSVFMVSINKYHACKRKPAARL*SLLAQE
Trigger: TTCCTGAGCAAGAAGGCTGCAGAGGCGAGCCGCTGG...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTGCGAACCACTTCTCGTaGCAGCGGCTCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCANHFS*QRLASA
Trigger: TGCAGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGC...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCTTCTTGGAGCTGGCTaGCATGCGCAGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VPSPKLVTQLQLFKSLINLLGAG*HAQGPE
Trigger: CTCAGGCCCCTGCGCATGGCAGCCAGCTCCAAGAAG...ATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACTGGACTCCCATGTCCTaGTGCAGCTGTGGCGATTGC +
Preference number: 4 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYWTPMS*CSCGDC
Trigger: GCAATCGCCACAGCTGCAGCAGGACATGGGAGTCCA...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTTCTGCTTGGACACCTTaGCCCAGGTTTTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLSAWTP*PRFSSA
Trigger: GGCTGAAGAAAACCTGGGCCAAGGTGTCCAAGCAGA...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGCCCAAAAAGGACAGTaGAGTAATACTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTAQKGQ*SNTACP
Trigger: TGGACAAGCAGTATTACTTCACTGTCCTTTTTGGGC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGTGAATCTTCGTCTATaGCAAGGGCTTTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTVNLRL*QGLCQA
Trigger: TGCTTGACAAAGCCCTTGTCATAGACGAAGATTCAC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAACCTCTGCAGCCTTCTTaGTCAGGAAGCCGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: GRSVFMVSINKYHACKRKPLQPS*SGSRVW
Trigger: CCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGG...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp CCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGCCTCTGCAGCCTTCTTaGTCAGGAAGCCGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSPKLVTQLQLFKSLINQPLQPS*SGSRVW
Trigger: CCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGG...CTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp CCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGCGTCCGCTCACAGCTaGAGCCCTCTAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: PSPKLVTQLQLFKSLINQASAHS*SPLEGT
Trigger: TGTACCTTCTAGAGGGCTGCAGCTGTGAGCGGACGC...CTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTCTTCCTCATGCTCTCTaGATGGGGAGAACAAATGTA +
Preference number: 4 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPLPHAL*MGRTNV
Trigger: TACATTTGTTCTCCCCATGCAGAGAGCATGAGGAAG...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTGGTTTCTCTTCCTCATaGTCTCTGCATGGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLGFSSS*SLHGEN
Trigger: GTTCTCCCCATGCAGAGAGCATGAGGAAGAGAAACC...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAGCAAATGTCCGCCACTaGCACCCACTTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQANVRH*HPLLNG
Trigger: GCCATTGAGAAGTGGGTGGCAGTGGCGGACATTTGC...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp TGTGGTGTGCTCGGAGCCATTACCCCTGCACTTACAGTATTCTTACGCAAAATGATTAGAGCTTTTGTCTaGTTGGACACCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CGVLGAITPALTVFLRKMIRAFV*LDTLAQ
Trigger: CTGGGCCAAGGTGTCCAAGCAGACAAAAGCTCTAAT...CATTTTGCGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCGAGCACACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TTTGAAATAAATGCTGAGGAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAACAGCGCAGCTCCAGTaGTTTTTGACCATCGTGCCC +
Preference number: 4 (lower is better)
Translates to: FEINAEEGYAWSGCSFSKTAQLQ*FLTIVP
Trigger: GGGCACGATGGTCAAAAACCACTGGAGCTGCGCTGT...TTTGGAGAAGGAACAGCCTGACCATGCATATCCCTCCTCAGCATTTATTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCCCTCACAGGCAGGGTTaGCTTCATACTGCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPPHRQG*LHTALR
Trigger: TCTTAAAGCAGTATGAAGCCAACCCTGCCTGTGAGG...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp CAGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGAGTTGTCGGATAAAAGTTTaGCTGGTGTCCAGCAAAATG +
Preference number: 4 (lower is better)
Translates to: QLHHLHSLSGSTVSGNWSCRIKV*LVSSKM
Trigger: CATTTTGCTGGACACCAGCCAAACTTTTATCCGACA...ACTCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCATGCAGCTTTCCTCCTaGACTTCGTGTACAAATCAG +
Preference number: 4 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPMQLSS*TSCTNQ
Trigger: CTGATTTGTACACGAAGTTCAGGAGGAAAGCTGCAT...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAGAACCCCACCTGTCTTaGGCAAATGCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQEPHLS*ANAAFL
Trigger: GAGGAAAGCTGCATTTGCTCAAGACAGGTGGGGTTC...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTATCTTGATCATCTTGTaGAAGAGCCCTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPILIIL*KSPQDV
Trigger: AACATCCTGAGGGCTCTTTCACAAGATGATCAAGAT...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTGGCCAGCTCCATGGCTaGCAACGTCTCAAAGCACTC +
Preference number: 4 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFGQLHG*QRLKAL
Trigger: GAGTGCTTTGAGACGTTGTCAGCCATGGAGCTGGCC...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTGCGTCCGCTCACAGCTaGAGCCCTCTAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFASAHS*SPLEGT
Trigger: TGTACCTTCTAGAGGGCTGCAGCTGTGAGCGGACGC...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp GCTAACTTCTTGCACTTTGAAATAAATGCTGAGGAGGGATATGCATGGTCAGGCGGTTTCTCTTCCTCATaGTCTCTGCATGGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: ANFLHFEINAEEGYAWSGGFSSS*SLHGEN
Trigger: GTTCTCCCCATGCAGAGAGCATGAGGAAGAGAAACC...GCCTGACCATGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAAGAAGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCTCCAAGACAGCAGTGTaGGGTGGTGGGGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETSKTAV*GGGDAA
Trigger: TGCTGCATCCCCACCACCGCACACTGCTGTCTTGGA...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp ATGAGAAAAGTGAATGAGAGTCCACTGTTTTCACTTCGGACATTGTCCCTGCTCAAATGTCCGCGTAACTaGCTTGGTGAATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MRKVNESPLFSLRTLSLLKCPRN*LGEWPP
Trigger: TGGAGGCCATTCACCAAGCCAGTTACGCGGACATTT...GAGCAGGGACAATGTCCGAAGTGAAAACAGTGGACTCTCATTCACTTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAGTCCTGCTGCAGCTGTaGCGATTGCAAAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQVLLQL*RLQKQK
Trigger: CTTCTGCTTTTGCAATCGCCACAGCTGCAGCAGGAC...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp GTGTCTGCACCCACAACAAAAGGTCCCTCTCTATTTTaGTTCTGTCCTGCTTTAAGATACCAGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSAPTTKGPSLF*FCPALRYQWPL
Trigger: CAGAGGCCACTGGTATCTTAAAGCAGGACAGAACAAAAATAGAGAGGGACCTTTTGTTGTGGGTGCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp TCTCGTGAGCCTTTGCCTGGATATCATCATCACCTGGCACTGCCCTTCCAATTGAAGAGCAACAATCTCTaGTTTAAGCCTTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: SREPLPGYHHHLALPFQLKSNNL*FKPFDF
Trigger: GAAATCGAAAGGCTTAAATCAGAGATTGTTGCTCTT...CAATTGGAAGGGCAGTGCCAGGTGATGATGATATCCAGGCAAAGGCTCACGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAACGGCCTCCACCATCGTaGACACAATCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GRSVFMVSINKYHACKRKRPPPS*TQSGFS
Trigger: AGAGAAACCAGATTGTGTTCACGATGGTGGAGGCCG...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACCGTTGGCACGGGAGCTaGTGTCGGCATAATTCATTA +
Preference number: 4 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYRWHGS*CRHNSL
Trigger: TAATGAATTATGCCGACATCAGCTCCCGTGCCAACG...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACACTCCCATGTCCTGCTaGAGCTGTGGCGATTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSYLEAGLPSALTNASANTPMSC*SCGDCK
Trigger: TTTGCAATCGCCACAGCTGCAGCAGGACATGGGAGT...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTACAGCGCAGCTCCAGTaGTTTTTGACCATCGTGCCC +
Preference number: 4 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFTAQLQ*FLTIVP
Trigger: GGGCACGATGGTCAAAAACCACTGGAGCTGCGCTGT...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp GCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAACTGGCTTGGTGAATaGCCTCCATCCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: AVPSPKLVTQLQLFKSLINWLGE*PPSTLS
Trigger: GGAAAGAGTGGATGGAGGCCATTCACCAAGCCAGTT...AATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAGATGTCGGAGTTGGTTaGTGGCGATCTTCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GRSVFMVSINKYHACKRKDVGVG*WRSSRS
Trigger: AGACCGAGAAGATCGCCACCAACCAACTCCGACATC...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAATGTGGCCAGAACCTTTaGGGTCATCGTCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQCGQNL*GHRHFH
Trigger: ATGGAAGTGACGATGACCCCAAAGGTTCTGGCCACA...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTCTTTCTGGCCCTCACTaGGGAGGATGTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCLSGPH*GGCSGH
Trigger: GTGTCCAGAACATCCTCCCCAGTGAGGGCCAGAAAG...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGAGCTTTTGTCTGCTTaGACACCTTGGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYELLSA*TPWPRF
Trigger: AAACCTGGGCCAAGGTGTCCAAGCAGACAAAAGCTC...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCCAATAAGACCACAGTaGAAGAGGCAGCGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETPIRPQ*KRQRQE
Trigger: CTCCTGACGCTGCCTCTTTCACTGTGGTCTTATTGG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCGGGGGATCTACATGGTaGCATGTCTGCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETGGSTW*HVCRIS
Trigger: GGAGATTCTGCAGACATGTCACCATGTAGATCCCCC...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAGTTGCTTTCCTTTCTTaGGGAAGAAGGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRSVFMVSINKYHACKRKVAFLS*GRRSGS
Trigger: AGACCCGGACCTTCTTCCTCAAGAAAGGAAAGCAAC...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCGATGAAACAGTCTTCTaGAGTTTGTCCATTAGAGCT +
Preference number: 4 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPDETVF*SLSIRA
Trigger: AGCTCTAATGGACAAACTTCAGAAGACTGTTTCATC...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TTGCACTTTGAAATAAATGCTGAGGAGGGATATGCATGGTCAGGCTGTTCCTTCGGGAATCTGAAACATTaGGTAGGTCAAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: LHFEINAEEGYAWSGCSFGNLKH*VGQERL
Trigger: GAGACGTTCTTGACCTACCCAATGTTTCAGATTCCC...GAAGGAACAGCCTGACCATGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTTGTCGGATAAAAGTTTaGCTGGTGTCCAGCAAAATG +
Preference number: 4 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLCRIKV*LVSSKM
Trigger: CATTTTGCTGGACACCAGCCAAACTTTTATCCGACA...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCTCAAAGACAGCTTTCTaGCCCTCACTGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETSKTAF*PSLGRM
Trigger: CATCCTCCCCAGTGAGGGCCAGAAAGCTGTCTTTGA...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCTGCTTTGAGACCCAGTaGCGGAGGACATTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETCFETQ*RRTFRT
Trigger: AGTCCTGAATGTCCTCCGCCACTGGGTCTCAAAGCA...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp AGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTaGAGTTCTAACAGAACACGAGGAGGTTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: RNIAGVLCGTLS*SSNRTRGGLPS
Trigger: TGAAGGTAAACCTCCTCGTGTTCTGTTAGAACTCAAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp CAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTaGCCCCTCACAACACACAGAGAACAGCTACACCAT +
Preference number: 4 (lower is better)
Translates to: QLQLFKSLINQV*PLTTHREQLHH
Trigger: ATGGTGTAGCTGTTCTCTGTGTGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
3UTR CAA 72 bp AAGCACTTGGAAGCTTCTTGGGGTGTGGCTAACTTCTaGCACTTTGAAATAAATGCTGAGGAGGGATATGCA +
Preference number: 4 (lower is better)
Translates to: KHLEASWGVANF*HFEINAEEGYA
Trigger: TGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAAGAAGTTAGCCACACCCCAAGAAGCTTCCAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAATATTGTCCACACACTaGCTGATGTCGCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQILSTH*LMSLIH
Trigger: ATGGATGAGCGACATCAGTCAGTGTGTGGACAATAT...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTAAAAGCAGAAGCAGGTaGCACAGAACAGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFKSRSR*HRTVGA
Trigger: AGCGCCCACTGTTCTGTGTCACCTGCTTCTGCTTTT...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTGCTGGCTGGTTTTCATaGTGTAAGGCGTCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCAGWFS*CKASFR
Trigger: ACGAAAGGACGCCTTACATCATGAAAACCAGCCAGC...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp CAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGCCCCTCACAACACACAGAGAACTTCCTCATGCTCTCTaGATGGGGAGAACAAATGTA +
Preference number: 4 (lower is better)
Translates to: QLFKSLINQVLPLTTHRELPHAL*MGRTNV
Trigger: TACATTTGTTCTCCCCATGCAGAGAGCATGAGGAAG...TTCTCTGTGTGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACCCTGTCTTGAGCAAATaGAGCTTTCCTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYPVLSK*SFPPEL
Trigger: AAGTTCAGGAGGAAAGCTGCATTTGCTCAAGACAGG...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCAACTGGCTTGGTGAATaGCCTCCATCCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETNWLGE*PPSTLS
Trigger: GGAAAGAGTGGATGGAGGCCATTCACCAAGCCAGTT...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTCTCGTTGTTAAATCCTaGTGGACTCCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCLVVKS*WTPMSC
Trigger: GCAGGACATGGGAGTCCACCAGGATTTAACAACGAG...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAATTGAGTTCAAAATCCTaGGCATGCTTTGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQLSSKS*ACFETQ
Trigger: CTGGGTCTCAAAGCATGCCCAGGATTTTGAACTCAA...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp CCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGGCCCAAAAAGGACAGTaGAGTAATACTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PKLVTQLQLFKSLINQVLAQKGQ*SNTACP
Trigger: TGGACAAGCAGTATTACTTCACTGTCCTTTTTGGGC...CAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCAAGGCTCCAATCCTTaGGTTCAAGGAAGACGTCAA +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETQGSNP*VQGRRQ
Trigger: TTGACGTCTTCCTTGAACTCAAGGATTGGAGCCTTG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTGTTGTTAAATCCTGGTaGACTCCCATGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFVVKSW*TPMSCC
Trigger: GCAGCAGGACATGGGAGTCCACCAGGATTTAACAAC...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp AAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTGGTTACTCATCTCATTaGAGTGCTGGCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KSCISTGEEHEKLRLSVCGYSSH*SAGWFS
Trigger: TGAAAACCAGCCAGCACTTCAATGAGATGAGTAACC...ACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTTTACTGTGGCACCCGTaGTTTACTATTATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: AVPSPKLVTQLQLFKSLILLWHP*FTIIVL
Trigger: CAACACAATAATAGTAAATCACGGGTGCCACAGTAA...AATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp CAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTATCAAAATCTCTGTTTTaGTTACAGTTGGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: QAVPSPKLVTQLQLFKSLSKSLF*LQLAST
Trigger: AGTACTTGCCAACTGTAAGCAAAACAGAGATTTTGA...TAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR GCA 90 bp GCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTGGGTTGGCTTCATACTaGTTTAAGAGCTTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: AVPSPKLVTQLQLFKSLIGLASY*FKSLSK
Trigger: TTTTGACAAGCTCTTAAAGCAGTATGAAGCCAACCC...AATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp CCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGAATCTTCTTGATGTCTaGATCCTCCTCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PKLVTQLQLFKSLINQVLNLLDV*ILLLLM
Trigger: CATCAAGAGGAGGAGGATCCAGACATCAAGAAGATT...CAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACTGTTTTGCTTACAGTTaGCAAGTACTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSYLEAGLPSALTNASANCFAYS*QVLGGC
Trigger: ACAGCCTCCAAGTACTTGCCAACTGTAAGCAAAACA...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp CCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGTGTTTTGCTTACAGTTaGCAAGTACTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPKLVTQLQLFKSLINQCFAYS*QVLGGC
Trigger: ACAGCCTCCAAGTACTTGCCAACTGTAAGCAAAACA...CTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCGGGAATCTGAAACATTaGGTAGGTCAAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETGNLKH*VGQERL
Trigger: GAGACGTTCTTGACCTACCCAATGTTTCAGATTCCC...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTAGGTGGATATCATCTTaGTCATCTTGTGAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFRWISS*SSCERA
Trigger: GGCTCTTTCACAAGATGATCAAGATGATATCCACCT...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR TCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTTGTTTAAGGCTGAGGTaGTCTCCAGAACACCATTGT +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFCLRLR*SPEHHC
Trigger: ACAATGGTGTTCTGGAGATCACCTCAGCCTTAAACA...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCTCATCTCATTGAAGTaGTGGCTGGTTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETLISLK*WLVFMM
Trigger: CATCATGAAAACCAGCCAGCACTTCAATGAGATGAG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTCTTCTGAAAACAATGTaGTCCAGGAGAGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFLLKTM*SRRVIC
Trigger: GCAGATCACTCTCCTGGACCACATTGTTTTCAGAAG...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTTCTTCAGCCTGTAGATaGCACTTCTGTTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFSSACR*HFCLRL
Trigger: CAGCCTTAAACAGAAGTGCCATCTACAGGCTGAAGA...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp GTTTTCATCATGCATCACGATGCAGCAATCTCTTATTaGAAACCGAAGAGAACAAACAAGCAACTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VFIMHHDAAISY*KPKRTNKQLGK
Trigger: TTTCCCGAGTTGCTTGTTTGTTCTCTTCGGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACTCAAAATCTCTGTTTTaGTTACAGTTGGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYSKSLF*LQLAST
Trigger: AGTACTTGCCAACTGTAAGCAAAACAGAGATTTTGA...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCGGGTTGGCTTCATACTaGTTTAAGAGCTTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETGLASY*FKSLSK
Trigger: TTTTGACAAGCTCTTAAAGCAGTATGAAGCCAACCC...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCCCTTCTTCAATGAATaGCAGATCTGTCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: SILCFHHASRCSNLLFETPFFNE*QICQVH
Trigger: ATGTACTTGACAGATCTGGCATTCATTGAAGAAGGG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTAATCTTCTTGATGTCTaGATCCTCCTCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFNLLDV*ILLLLM
Trigger: CATCAAGAGGAGGAGGATCCAGACATCAAGAAGATT...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp GCTAATAACCTTTACTCCTTTTCTGTAAGATCTTGTTaGGCCTGTGAACACCAAGAAACAAGTCACAAGGTA +
Preference number: 4 (lower is better)
Translates to: ANNLYSFSVRSC*ACEHQETSHKV
Trigger: TACCTTGTGACTTGTTTCTTGGTGTTCACAGGCCAAACAAGATCTTACAGAAAAGGAGTAAAGGTTATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR GCA 90 bp CCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGTTACTATTATTGTGTTaGTGTTTTTCATGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PKLVTQLQLFKSLINQVLLLLLC*CFSWPL
Trigger: AAGGGGCCATGAAAAACAGCAACACAATAATAGTAA...CAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR TCA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTAAGAGCAACAATCTCTaGTTTAAGCCTTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFKSNNL*FKPFDF
Trigger: GAAATCGAAAGGCTTAAATCAGAGATTGTTGCTCTT...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
3UTR CAA 72 bp CACGAGGAGGTTTACCTTCATTCCACTTCATTACAATaGTTACCAGCATCTCTATATTACATTCCATATACA +
Preference number: 4 (lower is better)
Translates to: HEEVYLHSTSLQ*LPASLYYIPYT
Trigger: TGTATATGGAATGTAATATAGAGATGCTGGTAACAATTGTAATGAAGTGGAATGAAGGTAAACCTCCTCGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS GCA 90 bp CGGGTCCTGCGTTGGTCCTGGGTGGTGCAGGCGTCCGCTCACAGCTaGAGCCCTCTAGAAGGTACATGCCCGCTGGCCGGCCGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: RVLRWSWVVQASAHS*SPLEGTCPLAGRSA
Trigger: AGCAGAGCGGCCGGCCAGCGGGCATGTACCTTCTAGAGGGCTGCAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 90 bp GCTTGTCCAAAGCGTCCCGGGCGCCTGCGGGTCCTGCGTTGGTCCTaGGTGGTGCAGGCGTCCGCTCACAGCTGCAGCCCTCTAGAAGGT +
Preference number: 5 (lower is better)
Translates to: ACPKRPGRLRVLRWS*VVQASAHSCSPLEG
Trigger: ACCTTCTAGAGGGCTGCAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTTTGGACAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 90 bp GAGCGAACCACTTCTCGTGCCAGCGGCTCGCCTCTGCAGCCTTCTTaGTCAGGAAGCCGCGTTTGGTGCCCTCCTTGCGCGCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: ERTTSRASGSPLQPS*SGSRVWCPPCAPAW
Trigger: CCATGCTGGCGCGCAAGGAGGGCACCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 90 bp GAAGTAATACTGCTTGTCCAAAGCGTCCCGGGCGCCTGCGGGTCCTaGGTTGGTCCTGGGTGGTGCAGGCGTCCGCTCACAGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: EVILLVQSVPGACGS*VGPGWCRRPLTAAA
Trigger: GGCTGCAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTTTGGACAAGCAGTATTACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 90 bp AATACTGCTTGTCCAAAGCGTCCCGGGCGCCTGCGGGTCCTGCGTTaGTCCTGGGTGGTGCAGGCGTCCGCTCACAGCTGCAGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: NTACPKRPGRLRVLR*SWVVQASAHSCSPL
Trigger: TAGAGGGCTGCAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTTTGGACAAGCAGTATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 90 bp AAGGACAGTGAAGTAATACTGCTTGTCCAAAGCGTCCCGGGCGCCTaGGGGTCCTGCGTTGGTCCTGGGTGGTGCAGGCGTCCGCTCACA +
Preference number: 5 (lower is better)
Translates to: KDSEVILLVQSVPGA*GSCVGPGWCRRPLT
Trigger: TGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTTTGGACAAGCAGTATTACTTCACTGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 90 bp ATTCTGGTAGAGAGCGAACCACTTCTCGTGCCAGCGGCTCGCCTCTaGAGCCTTCTTGCTCAGGAAGCCGCGTTTGGTGCCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: ILVESEPLLVPAARL*SLLAQEAAFGALLA
Trigger: CGCAAGGAGGGCACCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGCTCTCTACCAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 90 bp CTACCTGTCCTCCAGGCTGCCGATAGCGGAGGTGCCGGGGAGTTGTaGGGGATCTACATGGTGACATGTCTGCAGAATCTCCCGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LPVLQAADSGGAGEL*GIYMVTCLQNLPLC
Trigger: ACAAAGCGGGAGATTCTGCAGACATGTCACCATGTAGATCCCCCACAACTCCCCGGCACCTCCGCTATCGGCAGCCTGGAGGACAGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp TCTCGTGAGCCTTTGCCTGGATATCATCATCACCTGGCACTGCCCTTCCAATTGCGTTTGGTGCCCTCCTaGCGCGCCAGCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SREPLPGYHHHLALPFQLRLVPS*RASMAR
Trigger: CCTGGCCATGCTGGCGCGCAAGGAGGGCACCAAACG...CAATTGGAAGGGCAGTGCCAGGTGATGATGATATCCAGGCAAAGGCTCACGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp AACAGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGACCTGCGGGTCCTGCGTaGGTCCTGGGTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: NSYTISTAYQDPLCLVTGPAGPA*VLGGAG
Trigger: GCCTGCACCACCCAGGACCAACGCAGGACCCGCAGG...TCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTCGTTTGGTGCCCTCCTaGCGCGCCAGCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPRLVPS*RASMAR
Trigger: CCTGGCCATGCTGGCGCGCAAGGAGGGCACCAAACG...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp AGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGAGTTCTCAGGAAGCCGCGTTaGGTGCCCTCCTTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: SYTISTAYQDPLCLVTGVLRKPR*VPSLRA
Trigger: GGCGCGCAAGGAGGGCACCAAACGCGGCTTCCTGAG...AACTCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS TCA 90 bp AGCGCAGCTCCAGTGGTTTTTGACCATCGTGCCCAAAAAGGACAGTaGAGTAATACTGCTTGTCCAAAGCGTCCCGGGCGCCTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: SAAPVVFDHRAQKGQ*SNTACPKRPGRLRV
Trigger: GACCCGCAGGCGCCCGGGACGCTTTGGACAAGCAGTATTACTTCACTGTCCTTTTTGGGCACGATGGTCAAAAACCACTGGAGCTGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS TCA 90 bp AGACCGACCTGTCCTCCTTGGAGCTGTAGAGAATGTCCGGTCCACTaGGGAGGAGAGTCCAGCCAGAGTGTGATTTACTGTGGCACCCGT +
Preference number: 5 (lower is better)
Translates to: RPTCPPWSCRECPVH*GGESSQSVIYCGTR
Trigger: ACGGGTGCCACAGTAAATCACACTCTGGCTGGACTCTCCTCCTCAGTGGACCGGACATTCTCTACAGCTCCAAGGAGGACAGGTCGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCGCCAATTTGCCAGCCTaGCCTTTAGTCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGANLPA*PLVLDG
Trigger: TCCATCAAGGACTAAAGGCAAGGCTGGCAAATTGGC...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCACAGTTGGCAAGTACTaGGAGGCTGTACTGGTGATT +
Preference number: 5 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGTVGKY*EAVLVI
Trigger: AATCACCAGTACAGCCTCCAAGTACTTGCCAACTGT...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp CCACCCCAACCCCCACCGCCATGTGTGACCCGCTTTCCACAGAATTCCAATGGCCTGTTTTGCTTACAGTaGGCAAGTACTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PPQPPPPCVTRFPQNSNGLFCLQ*ASTWRL
Trigger: CAGCCTCCAAGTACTTGCCAACTGTAAGCAAAACAG...GCCATTGGAATTCTGTGGAAAGCGGGTCACACATGGCGGTGGGGGTTGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACCCTGCGGGTCCTGCGTaGGTCCTGGGTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYPAGPA*VLGGAG
Trigger: GCCTGCACCACCCAGGACCAACGCAGGACCCGCAGG...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 90 bp AACAATGTGGTCCAGGAGAGTGATCTGCTCGGCCAGCTCCATGGCTaGCAACGTCTCAAAGCACTCGGCCTTTGGACAGTCTGTCATTTG +
Preference number: 5 (lower is better)
Translates to: NNVVQESDLLGQLHG*QRLKALGLWTVCHL
Trigger: CAAATGACAGACTGTCCAAAGGCCGAGTGCTTTGAGACGTTGTCAGCCATGGAGCTGGCCGAGCAGATCACTCTCCTGGACCACATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 90 bp CATCCACTCTTTCCCGGCCTGCTCCTCCTCACAGCGCAGCTCCAGTaGTTTTTGACCATCGTGCCCAAAAAGGACAGTGAAGTAATACTG +
Preference number: 5 (lower is better)
Translates to: HPLFPGLLLLTAQLQ*FLTIVPKKDSEVIL
Trigger: CAGTATTACTTCACTGTCCTTTTTGGGCACGATGGTCAAAAACCACTGGAGCTGCGCTGTGAGGAGGAGCAGGCCGGGAAAGAGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp GAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGTCCGCGTAACTGGCTaGGTGAATGGCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: EGYAWSGCSFSKACDTASVRVTG*VNGLHP
Trigger: TGGATGGAGGCCATTCACCAAGCCAGTTACGCGGAC...TGAAGCTGTGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS TCA 90 bp GGATGTAAAGCTGGTGTACATACTCCGTCTCGGCCTCCACCATCGTaGACACAATCTGGTTTCTCTTCCTCATGCTCTCTGCATGGGGAG +
Preference number: 5 (lower is better)
Translates to: GCKAGVHTPSRPPPS*TQSGFSSSCSLHGE
Trigger: CTCCCCATGCAGAGAGCATGAGGAAGAGAAACCAGATTGTGTTCACGATGGTGGAGGCCGAGACGGAGTATGTACACCAGCTTTACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAACTCAGGAAGCCGCGTTaGGTGCCCTCCTTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: GRSVFMVSINKYHACKRKLRKPR*VPSLRA
Trigger: GGCGCGCAAGGAGGGCACCAAACGCGGCTTCCTGAG...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp TCTCGTGAGCCTTTGCCTGGATATCATCATCACCTGGCACTGCCCTTCCAATTGGCCAATTTGCCAGCCTaGCCTTTAGTCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: SREPLPGYHHHLALPFQLANLPA*PLVLDG
Trigger: TCCATCAAGGACTAAAGGCAAGGCTGGCAAATTGGC...CAATTGGAAGGGCAGTGCCAGGTGATGATGATATCCAGGCAAAGGCTCACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp AACAGCTACACCATCTCCACAGCCTATCAGGATCCACTGTGTCTGGTAACTGGACCCTCACAGGCAGGGTaGGCTTCATACTGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: NSYTISTAYQDPLCLVTGPSQAG*ASYCFK
Trigger: CTTAAAGCAGTATGAAGCCAACCCTGCCTGTGAGGG...TCCAGTTACCAGACACAGTGGATCCTGATAGGCTGTGGAGATGGTGTAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAATGTGGCCAGAACCTTaGGGGTCATCGTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTMWPEP*GSSSLP
Trigger: TGGAAGTGACGATGACCCCAAAGGTTCTGGCCACAT...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 90 bp TTGGGGTCATCGTCACTTCCATCGGGCTCCTCAATCAATGTACACTaGATGAGGGAGAGAACCCCACCTGTCTTGAGCAAATGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LGSSSLPSGSSINVH*MRERTPPVLSKCSF
Trigger: AAAGCTGCATTTGCTCAAGACAGGTGGGGTTCTCTCCCTCATTCAGTGTACATTGATTGAGGAGCCCGATGGAAGTGACGATGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTGGCGTCCTTTCGTTCTaGTCAAGCTTCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLGVLSF*SSFIQP
Trigger: GGGCTGGATGAAGCTTGACAAGAACGAAAGGACGCC...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS GCA 90 bp ATGGCGAGATTTTTCCGTATGTTCTCGGTGTCACTGACTTCATCATaGATCACTCTGGACAGTTCCTCCAGCTTGGACTTAGCGAACTCC +
Preference number: 5 (lower is better)
Translates to: MARFFRMFSVSLTSS*ITLDSSSSLDLANS
Trigger: GGAGTTCGCTAAGTCCAAGCTGGAGGAACTGTCCAGAGTGATGCATGATGAAGTCAGTGACACCGAGAACATACGGAAAAATCTCGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTCCGCGTAACTGGCTaGGTGAATGGCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYVRVTG*VNGLHP
Trigger: TGGATGGAGGCCATTCACCAAGCCAGTTACGCGGAC...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTGGACGCATCCGTTCCTaGGTCTTATTAAGAGCAACA +
Preference number: 5 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPGRIRS*VLLRAT
Trigger: TGTTGCTCTTAATAAGACCAAGGAACGGATGCGTCC...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTCGCATTTTGGAGAAATaGACAAGGCCCTCTTCGGTA +
Preference number: 5 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPRILEK*TRPSSV
Trigger: TACCGAAGAGGGCCTTGTCAATTTCTCCAAAATGCG...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 90 bp TCTTGTGAAAGAGCCCTCAGGATGTTCGCCGTTGCTTTCCTTTCTTaGGGAAGAAGGTCCGGGTCTCGTAGAACTTCTTCTAGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SCERALRMFAVAFLS*GRRSGSRRTSSSKF
Trigger: AAACTTGCTAGAAGAAGTTCTACGAGACCCGGACCTTCTTCCTCAAGAAAGGAAAGCAACGGCGAACATCCTGAGGGCTCTTTCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 90 bp GTAGAGAATGTCCGGTCCACTGAGGAGGAGAGTCCAGCCAGAGTGTaGTTTACTGTGGCACCCGTGATTTACTATTATTGTGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: VENVRSTEEESPARV*FTVAPVIYYYCVAV
Trigger: AACAGCAACACAATAATAGTAAATCACGGGTGCCACAGTAAATCACACTCTGGCTGGACTCTCCTCCTCAGTGGACCGGACATTCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCGCCTCTGCAGCCTTCTaGCTCAGGAAGCCGCGTTTG +
Preference number: 5 (lower is better)
Translates to: SILCFHHASRCSNLLFETASAAF*LRKPRL
Trigger: CAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGGC...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ATGCTGAGGAGGGATATGCATGGTCAGGCTGTTCCTTCTCCAAAGCTTGTGACAACCTTCTTAATCTTCTaGATGTCTGGATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MLRRDMHGQAVPSPKLVTTFLIF*MSGSSS
Trigger: GGAGGAGGATCCAGACATCAAGAAGATTAAGAAGGT...TGTCACAAGCTTTGGAGAAGGAACAGCCTGACCATGCATATCCCTCCTCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp ATGGTCATCTTAATGCCATGCCCCGAAATGGAGCATCAGTGGAAATGGAAACCCCGGATCTGGGGCACTTaGCAGGAATTGAGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: MVILMPCPEMEHQWKWKPRIWGT*QELSVL
Trigger: TAAAACACTCAATTCCTGCAAAGTGCCCCAGATCCG...GGGTTTCCATTTCCACTGATGCTCCATTTCGGGGCATGGCATTAAGATGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAAAATCCTGGGCATGCTTaGAGACCCAGTGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: GRSVFMVSINKYHACKRKNPGHA*RPSGGG
Trigger: TCCTCCGCCACTGGGTCTCAAAGCATGCCCAGGATT...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAACACTTCTCAATGGCGTaGGCACGGGAGCTGATGTCG +
Preference number: 5 (lower is better)
Translates to: GRSVFMVSINKYHACKRKHFSMA*ARELMS
Trigger: CGACATCAGCTCCCGTGCCAACGCCATTGAGAAGTG...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACCCCTCACAGGCAGGGTaGGCTTCATACTGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYPSQAG*ASYCFK
Trigger: CTTAAAGCAGTATGAAGCCAACCCTGCCTGTGAGGG...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ATTGTGCCATCAGCTTCCCTAAGCTTCAAAGTTTACACCTTCCCACCCCAGCCTTTGTCGGATAAAAGTTaGGCTGGTGTCCAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: IVPSASLSFKVYTFPPQPLSDKS*AGVQQN
Trigger: ATTTTGCTGGACACCAGCCAAACTTTTATCCGACAA...AGGCTGGGGTGGGAAGGTGTAAACTTTGAAGCTTAGGGAAGCTGATGGCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGGCACTTTGCAGGAATaGAGTGTTTTACTGAAACAG +
Preference number: 5 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTGTLQE*SVLLKQ
Trigger: CTGTTTCAGTAAAACACTCAATTCCTGCAAAGTGCC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp TGTGGTGTGCTCGGAGCCATTACCCCTGCACTTACAGTATTCTTACGCAAAATGCGTATGATGAACTCCTaGTCACATGTTCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: CGVLGAITPALTVFLRKMRMMNS*SHVLSL
Trigger: CAACGAGAGAACATGTGACAAGGAGTTCATCATACG...CATTTTGCGTAAGAATACTGTAAGTGCAGGGGTAATGGCTCCGAGCACACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GCATCTGCTAACGGAGGGTGCTGGCAGACAGACATGCATTACACACAATACACAGATATCATTCGCATTTaGGAGAAATTGACAAGGCCC +
Preference number: 5 (lower is better)
Translates to: ASANGGCWQTDMHYTQYTDIIRI*EKLTRP
Trigger: GGGCCTTGTCAATTTCTCCAAAATGCGAATGATATC...TGTGTATTGTGTGTAATGCATGTCTGTCTGCCAGCACCCTCCGTTAGCAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 90 bp CGATTTCGGTATCTTGATCTTCGAGTTGATGTCGGAGTTGGTTGGTaGCGATCTTCTCGGTCTCCACAATCTGAACTAGATGAATGTACT +
Preference number: 5 (lower is better)
Translates to: RFRYLDLRVDVGVGW*RSSRSPQSELDECT
Trigger: AGTACATTCATCTAGTTCAGATTGTGGAGACCGAGAAGATCGCCACCAACCAACTCCGACATCAACTCGAAGATCAAGATACCGAAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAACAGCTCCAGTGGTTTTaGACCATCGTGCCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQQLQWF*TIVPKK
Trigger: CTTTTTGGGCACGATGGTCAAAAACCACTGGAGCTG...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GCTAGCAGAGTGACAAAGAAACATTGCAGGTGTTCTCTGTGGTACCTTGTCCTTATCTTGATCTTCGAGTaGATGTCGGAGTTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: ASRVTKKHCRCSLWYLVLILIFE*MSELVG
Trigger: ACCAACCAACTCCGACATCAACTCGAAGATCAAGAT...AAGGACAAGGTACCACAGAGAACACCTGCAATGTTTCTTTGTCACTCTGCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp AGCTGTAAGAAATTCCGAGTAAAGCATTGGCAGTACCCACAGATGACCACTGGGTTCGATTTCGGTATCTaGATCTTCGAGTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: SCKKFRVKHWQYPQMTTGFDFGI*IFELMS
Trigger: CGACATCAACTCGAAGATCAAGATACCGAAATCGAA...CCCAGTGGTCATCTGTGGGTACTGCCAATGCTTTACTCGGAATTTCTTACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ATGAGAAAAGTGAATGAGAGTCCACTGTTTTCACTTCGGACATTGTCCCTGCTCACAGTTGGCAAGTACTaGGAGGCTGTACTGGTGATT +
Preference number: 5 (lower is better)
Translates to: MRKVNESPLFSLRTLSLLTVGKY*EAVLVI
Trigger: AATCACCAGTACAGCCTCCAAGTACTTGCCAACTGT...GAGCAGGGACAATGTCCGAAGTGAAAACAGTGGACTCTCATTCACTTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp TGGGGTGTGGCTAACTTCTTGCACTTTGAAATAAATGCTGAGGAGGGATATGCACTGTTTTGCTTACAGTaGGCAAGTACTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WGVANFLHFEINAEEGYALFCLQ*ASTWRL
Trigger: CAGCCTCCAAGTACTTGCCAACTGTAAGCAAAACAG...TGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAAGAAGTTAGCCACACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACCTCCACAGAAGGCACTaGAATAAGGGAACCTTGTCG +
Preference number: 5 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYLHRRH*NKGTLS
Trigger: CGACAAGGTTCCCTTATTCAAGTGCCTTCTGTGGAG...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp AGCATCCTATGTTTTCATCATGCATCACGATGCAGCAATCTCTTATTTGAAACCCTGCAGCTGTGGCGATaGCAAAAGCAGAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SILCFHHASRCSNLLFETLQLWR*QKQKQV
Trigger: CACCTGCTTCTGCTTTTGCAATCGCCACAGCTGCAG...GGTTTCAAATAAGAGATTGCTGCATCGTGATGCATGATGAAAACATAGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 90 bp TTTCGATTTCGGTATCTTGATCTTCGAGTTGATGTCGGAGTTGGTTaGTGGCGATCTTCTCGGTCTCCACAATCTGAACTAGATGAATGT +
Preference number: 5 (lower is better)
Translates to: FRFRYLDLRVDVGVG*WRSSRSPQSELDEC
Trigger: ACATTCATCTAGTTCAGATTGTGGAGACCGAGAAGATCGCCACCAACCAACTCCGACATCAACTCGAAGATCAAGATACCGAAATCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACAGAACCCCACCTGTCTaGAGCAAATGCAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: TSYLEAGLPSALTNASANRTPPV*SKCSFP
Trigger: AGGAAAGCTGCATTTGCTCAAGACAGGTGGGGTTCT...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACCCAAGGCTCCAATCCTaGAGTTCAAGGAAGACGTCA +
Preference number: 5 (lower is better)
Translates to: TSYLEAGLPSALTNASANPRLQS*SSRKTS
Trigger: TGACGTCTTCCTTGAACTCAAGGATTGGAGCCTTGG...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTGTCTGCTTGGACACCTaGGCCCAGGTTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFVCLDT*AQVFFS
Trigger: GCTGAAGAAAACCTGGGCCAAGGTGTCCAAGCAGAC...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGCTCCAGTGGTTTTaGACCATCGTGCCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: VPSPKLVTQLQLFKSLINQLQWF*TIVPKK
Trigger: CTTTTTGGGCACGATGGTCAAAAACCACTGGAGCTG...ATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp ACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGCCCCTCACAACAATCTTGATCTTCGAGTaGATGTCGGAGTTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: TQLQLFKSLINQVLPLTTILIFE*MSELVG
Trigger: ACCAACCAACTCCGACATCAACTCGAAGATCAAGAT...TGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp GCTAACTTCTTGCACTTTGAAATAAATGCTGAGGAGGGATATGCATGGTCAGGCTTCGATTTCGGTATCTaGATCTTCGAGTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: ANFLHFEINAEEGYAWSGFDFGI*IFELMS
Trigger: CGACATCAACTCGAAGATCAAGATACCGAAATCGAA...GCCTGACCATGCATATCCCTCCTCAGCATTTATTTCAAAGTGCAAGAAGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp CCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATCAGGGACGCATCCGTTCCTaGGTCTTATTAAGAGCAACA +
Preference number: 5 (lower is better)
Translates to: PSPKLVTQLQLFKSLINQGRIRS*VLLRAT
Trigger: TGTTGCTCTTAATAAGACCAAGGAACGGATGCGTCC...CTGATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp CAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGCCCCTCACAACACACAGAGAATGGGAATCTGAAACATaGGGTAGGTCAAGAACGTCT +
Preference number: 5 (lower is better)
Translates to: QLFKSLINQVLPLTTHREWESET*GRSRTS
Trigger: AGACGTTCTTGACCTACCCAATGTTTCAGATTCCCA...TTCTCTGTGTGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS TCA 90 bp GTCTCTCTGAGGTTTTTAAATCTTCCTTCAGATGAAACAGTCTTCTaGAGTTTGTCCATTAGAGCTTTTGTCTGCTTGGACACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VSLRFLNLPSDETVF*SLSIRAFVCLDTLA
Trigger: GGCCAAGGTGTCCAAGCAGACAAAAGCTCTAATGGACAAACTTCAGAAGACTGTTTCATCTGAAGGAAGATTTAAAAACCTCAGAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAATGGGAATCTGAAACATaGGGTAGGTCAAGAACGTCT +
Preference number: 5 (lower is better)
Translates to: GRSVFMVSINKYHACKRKWESET*GRSRTS
Trigger: AGACGTTCTTGACCTACCCAATGTTTCAGATTCCCA...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp AACAAGCTCCATAGAAAAGCTGCATTTCAACAGGGGAGGAGCATGAGAAATTACACCAAATGTTCTCTGTaGTTCTGGCTTGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: NKLHRKAAFQQGRSMRNYTKCSL*FWLVAK
Trigger: TTTTGCCACAAGCCAGAACAACAGAGAACATTTGGT...GTAATTTCTCATGCTCCTCCCCTGTTGAAATGCAGCTTTTCTATGGAGCTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTACATTCAGGACTCGATaGGTGGCTGTTCTCCGTATG +
Preference number: 5 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFTFRTR*VAVLRM
Trigger: CATACGGAGAACAGCCACCAATCGAGTCCTGAATGT...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp ACTTCATATTTAGAAGCTGGTCTCCCAAGTGCTCTAACAAATGCATCTGCTAACAGGTTACTCATCTCATaGAAGTGCTGGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: TSYLEAGLPSALTNASANRLLIS*KCWLVF
Trigger: GAAAACCAGCCAGCACTTCAATGAGATGAGTAACCT...GTTAGCAGATGCATTTGTTAGAGCACTTGGGAGACCAGCTTCTAAATATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GCTTCTTGGGGTGTGGCTAACTTCTTGCACTTTGAAATAAATGCTGAGGAGGGATTTACTATTATTGTGTaGCTGTTTTTCATGGCCCCT +
Preference number: 5 (lower is better)
Translates to: ASWGVANFLHFEINAEEGFTIIV*LFFMAP
Trigger: AGGGGCCATGAAAAACAGCAACACAATAATAGTAAA...TCCCTCCTCAGCATTTATTTCAAAGTGCAAGAAGTTAGCCACACCCCAAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp TACATTTACTTCCTCTGCAAAAGAGAGCTGCTGAGAATGGCAGTTACCTCACAAATGATTGTTTCACTGTaGAGAAAAATGCTGCTGACG +
Preference number: 5 (lower is better)
Translates to: YIYFLCKRELLRMAVTSQMIVSL*RKMLLT
Trigger: CGTCAGCAGCATTTTTCTCAACAGTGAAACAATCAT...TTGTGAGGTAACTGCCATTCTCAGCAGCTCTCTTTTGCAGAGGAAGTAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp CAGCTCTTCAAAAGCTTAATTAATCAGGTGTTGCCCCTCACAACACACAGAGAAATGATTGTTTCACTGTaGAGAAAAATGCTGCTGACG +
Preference number: 5 (lower is better)
Translates to: QLFKSLINQVLPLTTHREMIVSL*RKMLLT
Trigger: CGTCAGCAGCATTTTTCTCAACAGTGAAACAATCAT...TTCTCTGTGTGTTGTGAGGGGCAACACCTGATTAATTAAGCTTTTGAAGAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp AGAGTCCACTGTTTTCACTTCGGACATTGTCCCTGCTCTTATGTGCAAGATTTTGTCAAAATCTCTGTTTaGCTTACAGTTGGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: RVHCFHFGHCPCSYVQDFVKISV*LTVGKY
Trigger: GTACTTGCCAACTGTAAGCAAAACAGAGATTTTGAC...AAAATCTTGCACATAAGAGCAGGGACAATGTCCGAAGTGAAAACAGTGGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTTCAGGATGTTCGCCGTaGCTTTCCTTTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFSGCSP*LSFLEE
Trigger: TTCCTCAAGAAAGGAAAGCAACGGCGAACATCCTGA...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp TGCATTTCAACAGGGGAGGAGCATGAGAAATTACGTTTATCTGTTTGTTTGTTTACCTTCTTAATCTTCTaGATGTCTGGATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CISTGEEHEKLRLSVCLFTFLIF*MSGSSS
Trigger: GGAGGAGGATCCAGACATCAAGAAGATTAAGAAGGT...AAACAAACAAACAGATAAACGTAATTTCTCATGCTCCTCCCCTGTTGAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GTTCCTTCTCCAAAGCTTGTGACACAGCTTCAGCTCTTCAAAAGCTTAATTAATTTGTCGGATAAAAGTTaGGCTGGTGTCCAGCAAAAT +
Preference number: 5 (lower is better)
Translates to: VPSPKLVTQLQLFKSLINLSDKS*AGVQQN
Trigger: ATTTTGCTGGACACCAGCCAAACTTTTATCCGACAA...ATTAATTAAGCTTTTGAAGAGCTGAAGCTGTGTCACAAGCTTTGGAGAAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS-3UTR CAA 90 bp GGCAGGTCAGTCTTCATGGTCAGCATCAATAAGTATCATGCTTGTAAGAGAAAATGTGGCACAGTAACTTaGGAATTCTCTTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: GRSVFMVSINKYHACKRKCGTVT*EFSSKT
Trigger: AGTCTTTGAAGAGAATTCCAAAGTTACTGTGCCACA...TTTTCTCTTACAAGCATGATACTTATTGATGCTGACCATGAAGACTGACCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS-3UTR CAA 90 bp GTGAAATTGGTATGCTGTGGTCCTCACAAGAATGCTAATAACCTTTACTCCTTTGTCAAAATCTCTGTTTaGCTTACAGTTGGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: VKLVCCGPHKNANNLYSFVKISV*LTVGKY
Trigger: GTACTTGCCAACTGTAAGCAAAACAGAGATTTTGAC...AAAGGAGTAAAGGTTATTAGCATTCTTGTGAGGACCACAGCATACCAATTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 72 bp AAGCGTCCCGGGCGCCTGCGGGTCCTGCGTTGGTCCTaGGTGGTGCAGGCGTCCGCTCACAGCTGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: KRPGRLRVLRWS*VVQASAHSCSP
Trigger: AGGGCTGCAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 72 bp CTGCTTGTCCAAAGCGTCCCGGGCGCCTGCGGGTCCTaGGTTGGTCCTGGGTGGTGCAGGCGTCCGCTCACA +
Preference number: 6 (lower is better)
Translates to: LLVQSVPGACGS*VGPGWCRRPLT
Trigger: TGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTTTGGACAAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 72 bp TTGTCCAAAGCGTCCCGGGCGCCTGCGGGTCCTGCGTaGGTCCTGGGTGGTGCAGGCGTCCGCTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: LSKASRAPAGPA*VLGGAGVRSQL
Trigger: CAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACGCAGGACCCGCAGGCGCCCGGGACGCTTTGGACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 72 bp CGTTGGTCCTGGGTGGTGCAGGCGTCCGCTCACAGCTaGAGCCCTCTAGAAGGTACATGCCCGCTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: RWSWVVQASAHS*SPLEGTCPLAG
Trigger: GCCGGCCAGCGGGCATGTACCTTCTAGAGGGCTGCAGCTGTGAGCGGACGCCTGCACCACCCAGGACCAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 72 bp ACTTCTCGTGCCAGCGGCTCGCCTCTGCAGCCTTCTTaGTCAGGAAGCCGCGTTTGGTGCCCTCCTTGCGCG +
Preference number: 6 (lower is better)
Translates to: TSRASGSPLQPS*SGSRVWCPPCA
Trigger: CGCGCAAGGAGGGCACCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGGCGAGCCGCTGGCACGAGAAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 72 bp GTCGGCTGGTGCAGACTCCAAGACAGCAGTGTGCGGTaGTGGGGATGCAGCAGGGCTGTGGGTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: VGWCRLQDSSVR*WGCSRAVGGGG
Trigger: ACCACCACCACCCACAGCCCTGCTGCATCCCCACCACCGCACACTGCTGTCTTGGAGTCTGCACCAGCCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CAA 72 bp CACTTCTCGTGCCAGCGGCTCGCCTCTGCAGCCTTCTaGCTCAGGAAGCCGCGTTTGGTGCCCTCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: HFSCQRLASAAF*LRKPRLVPSLR
Trigger: GCGCAAGGAGGGCACCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGGCGAGCCGCTGGCACGAGAAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS GCA 72 bp GAGAGCGAACCACTTCTCGTGCCAGCGGCTCGCCTCTaGAGCCTTCTTGCTCAGGAAGCCGCGTTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: ESEPLLVPAARL*SLLAQEAAFGA
Trigger: GGCACCAAACGCGGCTTCCTGAGCAAGAAGGCTGCAGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 90 bp CGGCTACCTGTCCTCCAGGCTGCCGATAGCGGAGGTGCCGGGGAGTaGTGGGGGATCTACATGGTGACATGTCTGCAGAATCTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: RLPVLQAADSGGAGE*WGIYMVTCLQNLPL
Trigger: AAGCGGGAGATTCTGCAGACATGTCACCATGTAGATCCCCCACAACTCCCCGGCACCTCCGCTATCGGCAGCCTGGAGGACAGGTAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 72 bp CTCCAGGCTGCCGATAGCGGAGGTGCCGGGGAGTTGTaGGGGATCTACATGGTGACATGTCTGCAGAATCTC +
Preference number: 6 (lower is better)
Translates to: LQAADSGGAGEL*GIYMVTCLQNL
Trigger: GAGATTCTGCAGACATGTCACCATGTAGATCCCCCACAACTCCCCGGCACCTCCGCTATCGGCAGCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp GTCCAGGAGAGTGATCTGCTCGGCCAGCTCCATGGCTaGCAACGTCTCAAAGCACTCGGCCTTTGGACAGTC +
Preference number: 6 (lower is better)
Translates to: VQESDLLGQLHG*QRLKALGLWTV
Trigger: GACTGTCCAAAGGCCGAGTGCTTTGAGACGTTGTCAGCCATGGAGCTGGCCGAGCAGATCACTCTCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp CTGCCACCCACTTCTCAATGGCGTTGGCACGGGAGCTaGTGTCGGCATAATTCATTATCTGGGAGGCCACCA +
Preference number: 6 (lower is better)
Translates to: LPPTSQWRWHGS*CRHNSLSGRPP
Trigger: TGGTGGCCTCCCAGATAATGAATTATGCCGACATCAGCTCCCGTGCCAACGCCATTGAGAAGTGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 72 bp TTTCCCGGCCTGCTCCTCCTCACAGCGCAGCTCCAGTaGTTTTTGACCATCGTGCCCAAAAAGGACAGTGAA +
Preference number: 6 (lower is better)
Translates to: FPGLLLLTAQLQ*FLTIVPKKDSE
Trigger: TTCACTGTCCTTTTTGGGCACGATGGTCAAAAACCACTGGAGCTGCGCTGTGAGGAGGAGCAGGCCGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 72 bp TCTCGATCAAAATGTCCGCGTAACTGGCTTGGTGAATaGCCTCCATCCACTCTTTCCCGGCCTGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SRSKCPRNWLGE*PPSTLSRPAPP
Trigger: AGGAGGAGCAGGCCGGGAAAGAGTGGATGGAGGCCATTCACCAAGCCAGTTACGCGGACATTTTGATCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 72 bp TTAGCGAACTCCAGACTTTTCCTCTCCACATGTTCATaGGGGGTGTGGGCCAGGAGTTCGTGCAGCGTGATG +
Preference number: 6 (lower is better)
Translates to: LANSRLFLSTCS*GVWARSSCSVM
Trigger: CATCACGCTGCACGAACTCCTGGCCCACACCCCCCATGAACATGTGGAGAGGAAAAGTCTGGAGTTCGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS TCA 72 bp CCTTCTCCTGGCGTGAAGGTGCCAATAAGACCACAGTaGAAGAGGCAGCGTCAGGAGGCTCCACTACGATTT +
Preference number: 6 (lower is better)
Translates to: PSPGVKVPIRPQ*KRQRQEAPLRF
Trigger: AAATCGTAGTGGAGCCTCCTGACGCTGCCTCTTTCACTGTGGTCTTATTGGCACCTTCACGCCAGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CAA 90 bp CTCTTTCCCGGCCTGCTCCTCCTCACAGCGCAGCTCCAGTGGTTTTaGACCATCGTGCCCAAAAAGGACAGTGAAGTAATACTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: LFPGLLLLTAQLQWF*TIVPKKDSEVILLV
Trigger: GACAAGCAGTATTACTTCACTGTCCTTTTTGGGCACGATGGTCAAAAACCACTGGAGCTGCGCTGTGAGGAGGAGCAGGCCGGGAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS TCA 72 bp GCTGGTGTACATACTCCGTCTCGGCCTCCACCATCGTaGACACAATCTGGTTTCTCTTCCTCATGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: AGVHTPSRPPPS*TQSGFSSSCSL
Trigger: CAGAGAGCATGAGGAAGAGAAACCAGATTGTGTTCACGATGGTGGAGGCCGAGACGGAGTATGTACACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS TCA 72 bp TGTCCTCCTTGGAGCTGTAGAGAATGTCCGGTCCACTaGGGAGGAGAGTCCAGCCAGAGTGTGATTTACTGT +
Preference number: 6 (lower is better)
Translates to: CPPWSCRECPVH*GGESSQSVIYC
Trigger: ACAGTAAATCACACTCTGGCTGGACTCTCCTCCTCAGTGGACCGGACATTCTCTACAGCTCCAAGGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216219.2
CDS GCA 72 bp TCTCTCGTTGTTAAATCCTGGTGGACTCCCATGTCCTaGTGCAGCTGTGGCGATTGCAAAAGCAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SLVVKSWWTPMS*CSCGDCKSRSR
Trigger: CCTGCTTCTGCTTTTGCAATCGCCACAGCTGCAGCAGGACATGGGAGTCCACCAGGATTTAACAACGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp AGAGCCCTCAGGATGTTCGCCGTTGCTTTCCTTTCTTaGGGAAGAAGGTCCGGGTCTCGTAGAACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RALRMFAVAFLS*GRRSGSRRTSS
Trigger: AGAAGAAGTTCTACGAGACCCGGACCTTCTTCCTCAAGAAAGGAAAGCAACGGCGAACATCCTGAGGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 72 bp GTGCAGCGTGATGATATACCTGGGAATCTGAAACATTaGGTAGGTCAAGAACGTCTCCAGCATCCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: VQRDDIPGNLKH*VGQERLQHPPL
Trigger: GAGGGGAGGATGCTGGAGACGTTCTTGACCTACCCAATGTTTCAGATTCCCAGGTATATCATCACGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 72 bp GATCATCTTGTGAAAGAGCCCTCAGGATGTTCGCCGTaGCTTTCCTTTCTTGAGGAAGAAGGTCCGGGTCTC +
Preference number: 6 (lower is better)
Translates to: DHLVKEPSGCSP*LSFLEEEGPGL
Trigger: GAGACCCGGACCTTCTTCCTCAAGAAAGGAAAGCAACGGCGAACATCCTGAGGGCTCTTTCACAAGATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp TTCTTAATCTTCTTGATGTCTGGATCCTCCTCCTCTTaGTGGACGTGGTACGGACGCATCCGTTCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: FLIFLMSGSSSS*WTWYGRIRSLV
Trigger: GACCAAGGAACGGATGCGTCCGTACCACGTCCATCAAGAGGAGGAGGATCCAGACATCAAGAAGATTAAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS TCA 72 bp TCGTCACTTCCATCGGGCTCCTCAATCAATGTACACTaGATGAGGGAGAGAACCCCACCTGTCTTGAGCAAA +
Preference number: 6 (lower is better)
Translates to: SSLPSGSSINVH*MRERTPPVLSK
Trigger: TTTGCTCAAGACAGGTGGGGTTCTCTCCCTCATTCAGTGTACATTGATTGAGGAGCCCGATGGAAGTGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CCA 72 bp AGAACGTCTCCAGCATCCTCCCCTCACAGGCAGGGTTaGCTTCATACTGCTTTAAGAGCTTGTCAAAATCTC +
Preference number: 6 (lower is better)
Translates to: RTSPASSPHRQG*LHTALRACQNL
Trigger: GAGATTTTGACAAGCTCTTAAAGCAGTATGAAGCCAACCCTGCCTGTGAGGGGAGGATGCTGGAGACGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 90 bp GTGTCACTGACTTCATCATGCATCACTCTGGACAGTTCCTCCAGCTaGGACTTAGCGAACTCCAGACTTTTCCTCTCCACATGTTCATGG +
Preference number: 6 (lower is better)
Translates to: VSLTSSCITLDSSSS*DLANSRLFLSTCSW
Trigger: CCATGAACATGTGGAGAGGAAAAGTCTGGAGTTCGCTAAGTCCAAGCTGGAGGAACTGTCCAGAGTGATGCATGATGAAGTCAGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 72 bp CGGTATCTTGATCTTCGAGTTGATGTCGGAGTTGGTTaGTGGCGATCTTCTCGGTCTCCACAATCTGAACTA +
Preference number: 6 (lower is better)
Translates to: RYLDLRVDVGVG*WRSSRSPQSEL
Trigger: TAGTTCAGATTGTGGAGACCGAGAAGATCGCCACCAACCAACTCCGACATCAACTCGAAGATCAAGATACCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 72 bp GATTTCGGTATCTTGATCTTCGAGTTGATGTCGGAGTaGGTTGGTGGCGATCTTCTCGGTCTCCACAATCTG +
Preference number: 6 (lower is better)
Translates to: DFGILIFELMSE*VGGDLLGLHNL
Trigger: CAGATTGTGGAGACCGAGAAGATCGCCACCAACCAACTCCGACATCAACTCGAAGATCAAGATACCGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 72 bp AAGAACGTCTCCAGCATCCTCCCCTCACAGGCAGGGTaGGCTTCATACTGCTTTAAGAGCTTGTCAAAATCT +
Preference number: 6 (lower is better)
Translates to: KNVSSILPSQAG*ASYCFKSLSKS
Trigger: AGATTTTGACAAGCTCTTAAAGCAGTATGAAGCCAACCCTGCCTGTGAGGGGAGGATGCTGGAGACGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS TCA 72 bp GAGTTCATTATTGAGTTCAAAATCCTGGGCATGCTTTaGGACCCAGTGGCGGAGGACATTCAGGACTCGATT +
Preference number: 6 (lower is better)
Translates to: EFIIEFKILGML*DPVAEDIQDSI
Trigger: AATCGAGTCCTGAATGTCCTCCGCCACTGGGTCTCAAAGCATGCCCAGGATTTTGAACTCAATAATGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp AACCCCACCTGTCTTGAGCAAATGCAGCTTTCCTCCTaGACTTCGTGTACAAATCAGAAAGTGCTTCGTGAA +
Preference number: 6 (lower is better)
Translates to: NPTCLEQMQLSS*TSCTNQKVLRE
Trigger: TTCACGAAGCACTTTCTGATTTGTACACGAAGTTCAGGAGGAAAGCTGCATTTGCTCAAGACAGGTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS GCA 72 bp TTTTTCCGTATGTTCTCGGTGTCACTGACTTCATCATaGATCACTCTGGACAGTTCCTCCAGCTTGGACTTA +
Preference number: 6 (lower is better)
Translates to: FFRMFSVSLTSS*ITLDSSSSLDL
Trigger: TAAGTCCAAGCTGGAGGAACTGTCCAGAGTGATGCATGATGAAGTCAGTGACACCGAGAACATACGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CCA 72 bp TATCTTGATCTTCGAGTTGATGTCGGAGTTGGTTGGTaGCGATCTTCTCGGTCTCCACAATCTGAACTAGAT +
Preference number: 6 (lower is better)
Translates to: YLDLRVDVGVGW*RSSRSPQSELD
Trigger: ATCTAGTTCAGATTGTGGAGACCGAGAAGATCGCCACCAACCAACTCCGACATCAACTCGAAGATCAAGATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 72 bp TTTAAGCCTTTCGATTTCGGTATCTTGATCTTCGAGTaGATGTCGGAGTTGGTTGGTGGCGATCTTCTCGGT +
Preference number: 6 (lower is better)
Translates to: FKPFDFGILIFE*MSELVGGDLLG
Trigger: ACCGAGAAGATCGCCACCAACCAACTCCGACATCAACTCGAAGATCAAGATACCGAAATCGAAAGGCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151408.9
ENSMUST00000216219.2
CDS CAA 72 bp GACTTTACTCAGTTTCCCCCTCTCCACAGAAGGCACTaGAATAAGGGAACCTTGTCGGATAAAAGTTTGGCT +
Preference number: 6 (lower is better)
Translates to: DFTQFPPLHRRH*NKGTLSDKSLA
Trigger: AGCCAAACTTTTATCCGACAAGGTTCCCTTATTCAAGTGCCTTCTGTGGAGAGGGGGAAACTGAGTAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS GCA 72 bp AGCTTTCCTCCTGAACTTCGTGTACAAATCAGAAAGTaGTTCGTGAATAAGAAACACTGTCTCTCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: SFPPELRVQIRK*FVNKKHCLSPS
Trigger: GGAAGGCGAGAGACAGTGTTTCTTATTCACGAAGCACTTTCTGATTTGTACACGAAGTTCAGGAGGAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CAA 72 bp GCTCCATGGCTGACAACGTCTCAAAGCACTCGGCCTTaGGACAGTCTGTCATTTGAATTATATCCTCTAATT +
Preference number: 6 (lower is better)
Translates to: APWLTTSQSTRP*DSLSFELYPLI
Trigger: AATTAGAGGATATAATTCAAATGACAGACTGTCCAAAGGCCGAGTGCTTTGAGACGTTGTCAGCCATGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CAA 72 bp CGAATAATGTGTGATATCATTCGCATTTTGGAGAAATaGACAAGGCCCTCTTCGGTAAAGTTCGGTGTCCCT +
Preference number: 6 (lower is better)
Translates to: RIMCDIIRILEK*TRPSSVKFGVP
Trigger: AGGGACACCGAACTTTACCGAAGAGGGCCTTGTCAATTTCTCCAAAATGCGAATGATATCACACATTATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CAA 90 bp CGTATCTCTCGAATAATGTGTGATATCATTCGCATTTTGGAGAAATaGACAAGGCCCTCTTCGGTAAAGTTCGGTGTCCCTTCTTCAATG +
Preference number: 6 (lower is better)
Translates to: RISRIMCDIIRILEK*TRPSSVKFGVPSSM
Trigger: CATTGAAGAAGGGACACCGAACTTTACCGAAGAGGGCCTTGTCAATTTCTCCAAAATGCGAATGATATCACACATTATTCGAGAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp AGTGTTTTACTGAAACAGATGTCAGTGTCGTCTTTGTaGAGACGGGCATCAGACTTAATCATATGTGGCACA +
Preference number: 6 (lower is better)
Translates to: SVLLKQMSVSSL*RRASDLIICGT
Trigger: TGTGCCACATATGATTAAGTCTGATGCCCGTCTTCACAAAGACGACACTGACATCTGTTTCAGTAAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS CAA 90 bp TCCGGGTCTCGTAGAACTTCTTCTAGCAAGTTTAGAACATTCATTTaGAGTTCATTATTGAGTTCAAAATCCTGGGCATGCTTTGAGACC +
Preference number: 6 (lower is better)
Translates to: SGSRRTSSSKFRTFI*SSLLSSKSWACFET
Trigger: GGTCTCAAAGCATGCCCAGGATTTTGAACTCAATAATGAACTCAAAATGAATGTTCTAAACTTGCTAGAAGAAGTTCTACGAGACCCGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9
CDS TCA 72 bp GTCTCAAAGCACTCGGCCTTTGGACAGTCTGTCATTTaGATTATATCCTCTAATTTTAGGTGGATATCATCT +
Preference number: 6 (lower is better)
Translates to: VSKHSAFGQSVI*IISSNFRWISS
Trigger: AGATGATATCCACCTAAAATTAGAGGATATAATTCAAATGACAGACTGTCCAAAGGCCGAGTGCTTTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151408.9