Pregenerated sensors for RASGRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032356Ensembl transcript IDs: ENSMUST00000034909.11, ENSMUST00000034912.6, ENSMUST00000189545.2
Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAGAGCCCAGGCCAGGGAGGTACCCTGCAGCAGCTAAGTGGGGGTTaGGGCACGATGCACCAATCTCATTTCAGGAGACCCTGGGGTCCC | + |
Preference number: 1 (lower is better) Translates to: QSPGQGGTLQQLSGG*GTMHQSHFRRPWGP Trigger: GGGACCCCAGGGTCTCCTGAAATGAGATTGGTGCATCGTGCCCCAACCCCCACTTAGCTGCTGCAGGGTACCTCCCTGGCCTGGGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 90 bp | GGGAGGTGTCCTGGCTCCTGGAGCAGTGCAGGCAGACTTCTCTTCTaGGAGGCCATTTTCAGGCTGAGACCTGCTAGAGACTCCGAGGCC | + |
Preference number: 1 (lower is better) Translates to: GRCPGSWSSAGRLLF*EAIFRLRPARDSEA Trigger: GGCCTCGGAGTCTCTAGCAGGTCTCAGCCTGAAAATGGCCTCTCAGAAGAGAAGTCTGCCTGCACTGCTCCAGGAGCCAGGACACCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | GTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTaGAGCTGGAGCAACGGTACCTGGGGAGCACCGTGGAGACCACTC | + |
Preference number: 1 (lower is better) Translates to: VTQRCQVFWLSHPCL*SWSNGTWGAPWRPL Trigger: GAGTGGTCTCCACGGTGCTCCCCAGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 90 bp | AGAGACAGACGAGGCCAGATTCCTATCCGAGGAGGGGCTGGTGAGTaGGCCAGTCCTCTAGGGGCTCTTTGGAAGGAAGGGAGGACTTCT | + |
Preference number: 1 (lower is better) Translates to: RDRRGQIPIRGGAGE*ASPLGALWKEGRTS Trigger: AGAAGTCCTCCCTTCCTTCCAAAGAGCCCCTAGAGGACTGGCTCACTCACCAGCCCCTCCTCGGATAGGAATCTGGCCTCGTCTGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | CTGGGGAGCACCGTGGAGACCACTCTGAGCTCAGCACCTTACTGTTaGCTGCTCTCAGAGAACACAAAGGATAGGCTGACAAGCCATGGC | + |
Preference number: 1 (lower is better) Translates to: LGSTVETTLSSAPYC*LLSENTKDRLTSHG Trigger: GCCATGGCTTGTCAGCCTATCCTTTGTGTTCTCTGAGAGCAGCCAACAGTAAGGTGCTGAGCTCAGAGTGGTCTCCACGGTGCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 90 bp | TCAGAGGGCAGAGTCTCATATTTGCTGCTAGGACAGGGTGGCCATTaGGGAGTCTGTCTCCTCACCTGTGAAACCGGAGCACACCCAGTC | + |
Preference number: 1 (lower is better) Translates to: SEGRVSYLLLGQGGH*GVCLLTCETGAHPV Trigger: GACTGGGTGTGCTCCGGTTTCACAGGTGAGGAGACAGACTCCTCAATGGCCACCCTGTCCTAGCAGCAAATATGAGACTCTGCCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | ACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTaGGGGGCAGCTGGCGTTACGCTGCGGTGCCAGTGGGTGGGGAGA | + |
Preference number: 1 (lower is better) Translates to: TIIYNNRKAGVHRSS*GAAGVTLRCQWVGR Trigger: TCTCCCCACCCACTGGCACCGCAGCGTAACGCCAGCTGCCCCCCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CCA 90 bp | GATGTTCTCTCCTCTGCACCTGTGGGATCTGACCCTGGCTCAGTGTaGAGAGCCAAGGTGTACCCTGGGCAAATCAACCACAGTGATGTT | + |
Preference number: 1 (lower is better) Translates to: DVLSSAPVGSDPGSV*RAKVYPGQINHSDV Trigger: AACATCACTGTGGTTGATTTGCCCAGGGTACACCTTGGCTCTCCACACTGAGCCAGGGTCAGATCCCACAGGTGCAGAGGAGAGAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 90 bp | ACCTTCCATCCACCTTGGCCTCTCCTGGTTGGAGGGAGCACAAGCTaGACTGAGGTTGCTTTGGCAAGATCTCTTACTGAGAAGCCAGCA | + |
Preference number: 1 (lower is better) Translates to: TFHPPWPLLVGGSTS*TEVALARSLTEKPA Trigger: TGCTGGCTTCTCAGTAAGAGATCTTGCCAAAGCAACCTCAGTTCAGCTTGTGCTCCCTCCAACCAGGAGAGGCCAAGGTGGATGGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 90 bp | TCGCCAGCTTCTTGCAGGGACACATCCTTCTTAAGTTGGAGCTGCTaGTTTCCTGCCCTTCACCCCTTGCTTTGCTTAGATCCCAGGAAG | + |
Preference number: 1 (lower is better) Translates to: SPASCRDTSFLSWSC*FPALHPLLCLDPRK Trigger: CTTCCTGGGATCTAAGCAAAGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAAGGATGTGTCCCTGCAAGAAGCTGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | TACATAAGACAGTTAAAGCAGGCGTCTCTGACTGATGTGGGGGTATaGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACCATAGATGG | + |
Preference number: 1 (lower is better) Translates to: YIRQLKQASLTDVGV*PPGLLRMREENHRW Trigger: CCATCTATGGTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCTTATGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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3UTR TCA 90 bp | GAAGCCCAATTAATACATAAGACAGTTAAAGCAGGCGTCTCTGACTaGTGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGA | + |
Preference number: 1 (lower is better) Translates to: EAQLIHKTVKAGVSD*CGGMAPRASPNEGG Trigger: TCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCTTATGTATTAATTGGGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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3UTR TCA 90 bp | TCATTCCCTAGGATCCAGTTATCAGAGGGCCACCTGCCAACCATCTaGCCATGGCCTTTCATTGGGCCCATCCCTTTCTGGATGTATGCT | + |
Preference number: 1 (lower is better) Translates to: SFPRIQLSEGHLPTI*PWPFIGPIPFWMYA Trigger: AGCATACATCCAGAAAGGGATGGGCCCAATGAAAGGCCATGGTCAGATGGTTGGCAGGTGGCCCTCTGATAACTGGATCCTAGGGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 90 bp | CATCTGACCATGGCCTTTCATTGGGCCCATCCCTTTCTGGATGTATaGTTGCTTTTGTCCACTGAGGGTCACTGTCTCTGGGCATCCTCT | + |
Preference number: 1 (lower is better) Translates to: HLTMAFHWAHPFLDV*LLLSTEGHCLWASS Trigger: AGAGGATGCCCAGAGACAGTGACCCTCAGTGGACAAAAGCAAGCATACATCCAGAAAGGGATGGGCCCAATGAAAGGCCATGGTCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 90 bp | AGTACATCACCTCATTCCCTAGGATCCAGTTATCAGAGGGCCACCTaGCAACCATCTGACCATGGCCTTTCATTGGGCCCATCCCTTTCT | + |
Preference number: 1 (lower is better) Translates to: STSPHSLGSSYQRAT*QPSDHGLSLGPSLS Trigger: AGAAAGGGATGGGCCCAATGAAAGGCCATGGTCAGATGGTTGGCAGGTGGCCCTCTGATAACTGGATCCTAGGGAATGAGGTGATGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | GGGCATTGCCATCAGAGCAGCATCCTTTTCCTATGTGCATTTTCCTaGCTTAGGGAGGAGTTGACTAGGTTTCAGCTCTGGAGGGTGGTG | + |
Preference number: 1 (lower is better) Translates to: GHCHQSSILFLCAFS*LREELTRFQLWRVV Trigger: CACCACCCTCCAGAGCTGAAACCTAGTCAACTCCTCCCTAAGCCAGGAAAATGCACATAGGAAAAGGATGCTGCTCTGATGGCAATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | GTTATCAGAGGGCCACCTGCCAACCATCTGACCATGGCCTTTCATTaGGCCCATCCCTTTCTGGATGTATGCTTGCTTTTGTCCACTGAG | + |
Preference number: 1 (lower is better) Translates to: VIRGPPANHLTMAFH*AHPFLDVCLLLSTE Trigger: CTCAGTGGACAAAAGCAAGCATACATCCAGAAAGGGATGGGCCCAATGAAAGGCCATGGTCAGATGGTTGGCAGGTGGCCCTCTGATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 90 bp | CTCAGTGTGGAGAGCCAAGGTGTACCCTGGGCAAATCAACCACAGTaGTGTTTCAAGCTTAGGTTTACAGGTGTCCCTGACCCTCACTCT | + |
Preference number: 1 (lower is better) Translates to: LSVESQGVPWANQPQ*CFKLRFTGVPDPHS Trigger: AGAGTGAGGGTCAGGGACACCTGTAAACCTAAGCTTGAAACATCACTGTGGTTGATTTGCCCAGGGTACACCTTGGCTCTCCACACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 90 bp | TTCTTAAGTTGGAGCTGCTGCTTTCCTGCCCTTCACCCCTTGCTTTaGTTAGATCCCAGGAAGCTGTGTGTGAAGGGCATTGCCATCAGA | + |
Preference number: 1 (lower is better) Translates to: FLSWSCCFPALHPLL*LDPRKLCVKGIAIR Trigger: TCTGATGGCAATGCCCTTCACACACAGCTTCCTGGGATCTAAGCAAAGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | ATCTGCTATGTGTTCAAGTCCTCAACCTTGCCACTGCTACCAGGGTaGGGGATTTCCAGCTCAGACTTGCTCTCTGTTCCCATAGTTGAG | + |
Preference number: 1 (lower is better) Translates to: ICYVFKSSTLPLLPG*GISSSDLLSVPIVE Trigger: CTCAACTATGGGAACAGAGAGCAAGTCTGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 90 bp | TCTCTGTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCAGCTaGGAGGTAGGGTGGATAAAGGAACACCCCACAGTTTCTTCAGAG | + |
Preference number: 1 (lower is better) Translates to: SLSLSVSLSLSLSLS*EVGWIKEHPTVSSE Trigger: CTCTGAAGAAACTGTGGGGTGTTCCTTTATCCACCCTACCTCTCAGCTGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGAGACAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 90 bp | AAAGGAACACCCCACAGTTTCTTCAGAGCCAGTGATCACACATGCTaGCATTCTATCTTAGCTTCGCCAGCTTCTTGCAGGGACACATCC | + |
Preference number: 1 (lower is better) Translates to: KGTPHSFFRASDHTC*HSILASPASCRDTS Trigger: GGATGTGTCCCTGCAAGAAGCTGGCGAAGCTAAGATAGAATGCCAGCATGTGTGATCACTGGCTCTGAAGAAACTGTGGGGTGTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 90 bp | AGAAGCATTTTCTATGTATCTGCTATGTGTTCAAGTCCTCAACCTTaGCACTGCTACCAGGGTGGGGGATTTCCAGCTCAGACTTGCTCT | + |
Preference number: 1 (lower is better) Translates to: RSIFYVSAMCSSPQP*HCYQGGGFPAQTCS Trigger: AGAGCAAGTCTGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATACATAGAAAATGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 90 bp | CAACACTTCAAGCACGTCCAGACCAAGAAGCATTTTCTATGTATCTaGTATGTGTTCAAGTCCTCAACCTTGCCACTGCTACCAGGGTGG | + |
Preference number: 1 (lower is better) Translates to: QHFKHVQTKKHFLCI*YVFKSSTLPLLPGW Trigger: CCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATACATAGAAAATGCTTCTTGGTCTGGACGTGCTTGAAGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | GCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGCAGGGCTTCTCCGAATaGGGGAGGAGAACCATAGAT | + |
Preference number: 2 (lower is better) Translates to: ASLTDVGVWPPGLLRMREQGFSE*GRRTID Trigger: ATCTATGGTTCTCCTCCCTCATTCGGAGAAGCCCTG...CTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | GCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGTCTTATCCAGTGGAATaGCAGGTCCTGCCAGTCCCT | + |
Preference number: 2 (lower is better) Translates to: ASLTDVGVWPPGLLRMRESYPVE*QVLPVP Trigger: AGGGACTGGCAGGACCTGTCATTCCACTGGATAAGA...CTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR GCA 90 bp | GGGCTAGAAACCCCACCGGTGCTGAAGCTGGGAGGTGTCCTGGCTCCTGGAGCAGTGTGTGAAGGGCATTaGCATCAGAGCAGCATCCTT | + |
Preference number: 2 (lower is better) Translates to: GLETPPVLKLGGVLAPGAVCEGH*HQSSIL Trigger: AAGGATGCTGCTCTGATGGCAATGCCCTTCACACAC...TGCTCCAGGAGCCAGGACACCTCCCAGCTTCAGCACCGGTGGGGTTTCTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR GCA 90 bp | GCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGTTAAGTTGGAGCTGCTaGTTTCCTGCCCTTCACCCC | + |
Preference number: 2 (lower is better) Translates to: ASLTDVGVWPPGLLRMRELSWSC*FPALHP Trigger: GGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAA...CTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | CTTGCCCTAGGTAGATACTGTGTGGAGCAAAGCTCTGTGCTTGCTTGGAGTGTGCCAGAGGGCCCTGGCTaGGCCTGTGGGGTGCAATCT | + |
Preference number: 2 (lower is better) Translates to: LALGRYCVEQSSVLAWSVPEGPG*ACGVQS Trigger: AGATTGCACCCCACAGGCTCAGCCAGGGCCCTCTGG...CACACTCCAAGCAAGCACAGAGCTTTGCTCCACACAGTATCTACCTAGGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | GCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGTCAGCACCTTACTGTTaGCTGCTCTCAGAGAACACA | + |
Preference number: 2 (lower is better) Translates to: ASLTDVGVWPPGLLRMRESAPYC*LLSENT Trigger: TGTGTTCTCTGAGAGCAGCCAACAGTAAGGTGCTGA...CTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 90 bp | AGGGATGGTGGAAGAGACGCTTCGACTCCACTCTGTCACGCAGCGTaGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTGGAGCTGGAG | + |
Preference number: 2 (lower is better) Translates to: RDGGRDASTPLCHAA*SSLLAFPSMSVELE Trigger: CTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAGCGTCTCTTCCACCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR GCA 90 bp | GCTTTCCCATCCATGTCTGTGGAGCTGGAGCAACGGTACCTGGGGAGCACCGTGTTCTTAAGTTGGAGCTaGTGCTTTCCTGCCCTTCAC | + |
Preference number: 2 (lower is better) Translates to: AFPSMSVELEQRYLGSTVFLSWS*CFPALH Trigger: GTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAA...CACGGTGCTCCCCAGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | GAGACGCTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCAGGGTCTACCCAGCTaGCACTGTCCTCTGTCTTGT | + |
Preference number: 2 (lower is better) Translates to: ETLRLHSVTQRCQVFWLSQGLPS*HCPLSC Trigger: ACAAGACAGAGGACAGTGCCAGCTGGGTAGACCCTG...GGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAGCGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 90 bp | CAAGGGAATCACAAGGCACCTTCCATCCACCTTGGCCTCTCCTGGTaGGAGGGAGCACAAGCTGAACTGAGGTTGCTTTGGCAAGATCTC | + |
Preference number: 2 (lower is better) Translates to: QGNHKAPSIHLGLSW*EGAQAELRLLWQDL Trigger: GAGATCTTGCCAAAGCAACCTCAGTTCAGCTTGTGCTCCCTCCAACCAGGAGAGGCCAAGGTGGATGGAAGGTGCCTTGTGATTCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | GAACACCCCACAGTTTCTTCAGAGCCAGTGATCACACATGCTGGCATTCTATCTAGCTCTGGAGGGTGGTaGGGCTGGCAGAGCTGCAGA | + |
Preference number: 2 (lower is better) Translates to: EHPTVSSEPVITHAGILSSSGGW*GWQSCR Trigger: TCTGCAGCTCTGCCAGCCTCACCACCCTCCAGAGCT...AGATAGAATGCCAGCATGTGTGATCACTGGCTCTGAAGAAACTGTGGGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | CTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCAGGCAGACTTCTCTTCTaGGAGGCCATTTTCAGGCTG | + |
Preference number: 2 (lower is better) Translates to: LRLHSVTQRCQVFWLSHPGRLLF*EAIFRL Trigger: CAGCCTGAAAATGGCCTCTCAGAAGAGAAGTCTGCC...TGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR GCA 90 bp | CTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCAGGGGTTGGGGCACGATaGACCAATCTCATTTCAGGA | + |
Preference number: 2 (lower is better) Translates to: LRLHSVTQRCQVFWLSHPGVGAR*TNLISG Trigger: TCCTGAAATGAGATTGGTGCATCGTGCCCCAACCCC...TGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | TTTGTGTTCTCAAGGACCTGGGGATCCATCCATCCAGTGTCATTTCCCCTTTGTGCTGCAGACAGTGGGTaGGCAGAAGGGCAGACAGTC | + |
Preference number: 2 (lower is better) Translates to: FVFSRTWGSIHPVSFPLCAADSG*AEGQTV Trigger: GACTGTCTGCCCTTCTGCCCACCCACTGTCTGCAGC...ACAAAGGGGAAATGACACTGGATGGATGGATCCCCAGGTCCTTGAGAACACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCAGCTGGGAGGTGTCCTaGCTCCTGGAGCAGTGCAGG | + |
Preference number: 2 (lower is better) Translates to: SSIFPTCLPGTASILTVCSWEVS*LLEQCR Trigger: CCTGCACTGCTCCAGGAGCCAGGACACCTCCCAGCT...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 90 bp | CTTCTTAAGTTGGAGCTGCTGCTTTCCTGCCCTTCACCCCTTGCTTaGCTTAGATCCCAGGAAGCTGTGTGTGAAGGGCATTGCCATCAG | + |
Preference number: 2 (lower is better) Translates to: LLKLELLLSCPSPLA*LRSQEAVCEGHCHQ Trigger: CTGATGGCAATGCCCTTCACACACAGCTTCCTGGGATCTAAGCAAAGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | GCAGATATGAATGAAGAAGGGGCTAGAAACCCCACCGGTGCTGAAGCTGGGAGGTTTCTTCAGAGCCAGTaGTCACACATGCTGGCATTC | + |
Preference number: 2 (lower is better) Translates to: ADMNEEGARNPTGAEAGRFLQSQ*SHMLAF Trigger: GAATGCCAGCATGTGTGATCACTGGCTCTGAAGAAA...CCTCCCAGCTTCAGCACCGGTGGGGTTTCTAGCCCCTTCTTCATTCATATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCAAGAAGCCATTTAGCTaGGGCGGGGGAGGGGCAGGT | + |
Preference number: 2 (lower is better) Translates to: SSIFPTCLPGTASILTVCKKPFS*GGGGAG Trigger: ACCTGCCCCTCCCCCGCCCCAGCTAAATGGCTTCTT...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | GTGGAGCAAAGCTCTGTGCTTGCTTGGAGTGTGATGTTCTCTCCTCTGCACCTGGCAACTCCCTTTCTATaGGCCTCAGTTTCTCAGCCT | + |
Preference number: 2 (lower is better) Translates to: VEQSSVLAWSVMFSPLHLATPFL*ASVSQP Trigger: AGGCTGAGAAACTGAGGCCCATAGAAAGGGAGTTGC...CAGGTGCAGAGGAGAGAACATCACACTCCAAGCAAGCACAGAGCTTTGCTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | CTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCACTCCATCTTATCCAGTaGAATGACAGGTCCTGCCAG | + |
Preference number: 2 (lower is better) Translates to: LRLHSVTQRCQVFWLSHPLHLIQ*NDRSCQ Trigger: CTGGCAGGACCTGTCATTCCACTGGATAAGATGGAG...TGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCGGAGGGAGCACAAGCTaGACTGAGGTTGCTTTGGCA | + |
Preference number: 2 (lower is better) Translates to: SSIFPTCLPGTASILTVCGGSTS*TEVALA Trigger: TGCCAAAGCAACCTCAGTTCAGCTTGTGCTCCCTCC...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | ATAAAGGAACACCCCACAGTTTCTTCAGAGCCAGTGATCACACATGCTGGCATTCAGGGCTTCTCCGAATaGGGGAGGAGAACCATAGAT | + |
Preference number: 2 (lower is better) Translates to: IKEHPTVSSEPVITHAGIQGFSE*GRRTID Trigger: ATCTATGGTTCTCCTCCCTCATTCGGAGAAGCCCTG...AATGCCAGCATGTGTGATCACTGGCTCTGAAGAAACTGTGGGGTGTTCCTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR TCA 90 bp | AGGATTATGACTGCAGATATGAATGAAGAAGGGGCTAGAAACCCCACCGGTGCTGAGAATGGGAGACCTTaGACCTGCATCAACATGGCT | + |
Preference number: 2 (lower is better) Translates to: RIMTADMNEEGARNPTGAENGRP*TCINMA Trigger: AGCCATGTTGATGCAGGTTCAAGGTCTCCCATTCTC...AGCACCGGTGGGGTTTCTAGCCCCTTCTTCATTCATATCTGCAGTCATAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR GCA 90 bp | GAGTGCAGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGAGGCGTTACGCTGCGGTaGCAGTGGGTGGGGAGAACA | + |
Preference number: 2 (lower is better) Translates to: ECRHLYFECRHLYFGFTGGVTLR*QWVGRT Trigger: TGTTCTCCCCACCCACTGGCACCGCAGCGTAACGCC...TCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCTGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
||
3UTR-3UTR CCA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCCCTCTAGGGGCTCTTTaGAAGGAAGGGAGGACTTCT | + |
Preference number: 2 (lower is better) Translates to: SSIFPTCLPGTASILTVCPLGAL*KEGRTS Trigger: AGAAGTCCTCCCTTCCTTCCAAAGAGCCCCTAGAGG...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR CAA 90 bp | AAGAAGCATTTTCTATGTATCTGCTATGTGTTCAAGTCCTCAACCTaGCCACTGCTACCAGGGTGGGGGATTTCCAGCTCAGACTTGCTC | + |
Preference number: 2 (lower is better) Translates to: KKHFLCICYVFKSST*PLLPGWGISSSDLL Trigger: GAGCAAGTCTGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATACATAGAAAATGCTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR TCA 90 bp | CTTGCCCTAGGTAGATACTGTGTGGAGCAAAGCTCTGTGCTTGCTTGGAGTGTGGCAAATCAACCACAGTaGTGTTTCAAGCTTAGGTTT | + |
Preference number: 2 (lower is better) Translates to: LALGRYCVEQSSVLAWSVANQPQ*CFKLRF Trigger: AAACCTAAGCTTGAAACATCACTGTGGTTGATTTGC...CACACTCCAAGCAAGCACAGAGCTTTGCTCCACACAGTATCTACCTAGGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR GCA 90 bp | GTCAACCACAAAGGTTATAAATATAAGAATAATAGAGTACTGGGACTGCTTGGGGGAGCTGCTGTTCCTTaGCATCAGGGAGCCTCTGCC | + |
Preference number: 2 (lower is better) Translates to: VNHKGYKYKNNRVLGLLGGAAVP*HQGASA Trigger: GGCAGAGGCTCCCTGATGGCAAGGAACAGCAGCTCC...CCCAAGCAGTCCCAGTACTCTATTATTCTTATATTTATAACCTTTGTGGTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 90 bp | CCACATCTGTCACCTGGGCACTTAATTATGAAATTTCTGTCCCAGTaGCCTAGCACTGTCCTGGTATTTGGATTTAGTGGGGGAAATGTC | + |
Preference number: 2 (lower is better) Translates to: PHLSPGHLIMKFLSQ*PSTVLVFGFSGGNV Trigger: GACATTTCCCCCACTAAATCCAAATACCAGGACAGTGCTAGGCAACTGGGACAGAAATTTCATAATTAAGTGCCCAGGTGACAGATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR TCA 90 bp | ACTTCAAGCACGTCCAGACCAAGAAGCATTTTCTATGTATCTGCTATGTGTTCACTCTGCCTGGTCACCTaGCTAGTCATTCTCAAGAGT | + |
Preference number: 2 (lower is better) Translates to: TSSTSRPRSIFYVSAMCSLCLVT*LVILKS Trigger: ACTCTTGAGAATGACTAGTCAGGTGACCAGGCAGAG...TGAACACATAGCAGATACATAGAAAATGCTTCTTGGTCTGGACGTGCTTGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR GCA 90 bp | CCACTGGTATTGCTGTCTGCTTCAATCCTTTTCCTCTTTCAAGGGAATCACAAGGGTCTTTATAGGTTATaGTGGGCCTCCCTGTTTGTA | + |
Preference number: 2 (lower is better) Translates to: PLVLLSASILFLFQGNHKGLYRL*WASLFV Trigger: TACAAACAGGGAGGCCCAGCATAACCTATAAAGACC...CTTGTGATTCCCTTGAAAGAGGAAAAGGATTGAAGCAGACAGCAATACCAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CCA 90 bp | CCACTGGTATTGCTGTCTGCTTCAATCCTTTTCCTCTTTCAAGGGAATCACAAGGAACTGAGGTTGCTTTaGCAAGATCTCTTACTGAGA | + |
Preference number: 2 (lower is better) Translates to: PLVLLSASILFLFQGNHKELRLL*QDLLLR Trigger: TCTCAGTAAGAGATCTTGCCAAAGCAACCTCAGTTC...CTTGTGATTCCCTTGAAAGAGGAAAAGGATTGAAGCAGACAGCAATACCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR TCA 90 bp | CCTGTTTGTATTTATGTCCTCCAGAATCCCAGCATCTGTGATCATCAGCTTCTTCTCAGTTTCTCAGCCTaGAGAATGACAAGAATGGAT | + |
Preference number: 2 (lower is better) Translates to: PVCIYVLQNPSICDHQLLLSFSA*RMTRMD Trigger: ATCCATTCTTGTCATTCTTCAGGCTGAGAAACTGAG...AAGAAGCTGATGATCACAGATGCTGGGATTCTGGAGGACATAAATACAAACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | CTGGGGCACCAGAGGGCCCTGGCTGAGCCTGTGGGGTaGAATCTACTGGTAGATACAGGTGTGCTGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: LGHQRALAEPVG*NLLVDTGVLWL Trigger: CAGCCACAGCACACCTGTATCTACCAGTAGATTGCACCCCACAGGCTCAGCCAGGGCCCTCTGGTGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CGAGGCCAGATTCCTATCCGAGGAGGGGCTGGTGAGTaGGCCAGTCCTCTAGGGGCTCTTTGGAAGGAAGGG | + |
Preference number: 3 (lower is better) Translates to: RGQIPIRGGAGE*ASPLGALWKEG Trigger: CCCTTCCTTCCAAAGAGCCCCTAGAGGACTGGCTCACTCACCAGCCCCTCCTCGGATAGGAATCTGGCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | GGCCAGGGAGGTACCCTGCAGCAGCTAAGTGGGGGTTaGGGCACGATGCACCAATCTCATTTCAGGAGACCC | + |
Preference number: 3 (lower is better) Translates to: GQGGTLQQLSGG*GTMHQSHFRRP Trigger: GGGTCTCCTGAAATGAGATTGGTGCATCGTGCCCCAACCCCCACTTAGCTGCTGCAGGGTACCTCCCTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CAA 90 bp | GGGCTAGAAACCCCACCGGTGCTGAAGCTGGGAGGTGTCCTGGCTCCTGGAGCATGGCTTAGGGAGGAGTaGACTAGGTTTCAGCTCTGG | + |
Preference number: 3 (lower is better) Translates to: GLETPPVLKLGGVLAPGAWLREE*TRFQLW Trigger: CCAGAGCTGAAACCTAGTCAACTCCTCCCTAAGCCA...TGCTCCAGGAGCCAGGACACCTCCCAGCTTCAGCACCGGTGGGGTTTCTAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CGTCTTCCTTACTACCTAGGAGCTCAGATCCTACTGTaGTGTAGGGAGCTGGGGCACCAGAGGGCCCTGGCT | + |
Preference number: 3 (lower is better) Translates to: RLPYYLGAQILL*CRELGHQRALA Trigger: AGCCAGGGCCCTCTGGTGCCCCAGCTCCCTACATCACAGTAGGATCTGAGCTCCTAGGTAGTAAGGAAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | TTCAGGAGACCCTGGGGTCCCCGGGTAGAGCCAGTGTaGGACAAAGCCCTGGATACTGCCCTTGCTCTAAAC | + |
Preference number: 3 (lower is better) Translates to: FRRPWGPRVEPV*DKALDTALALN Trigger: GTTTAGAGCAAGGGCAGTATCCAGGGCTTTGTCTCACACTGGCTCTACCCGGGGACCCCAGGGTCTCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | CAGTTAAAGCAGGCGTCTCTGACTGATGTGGGGGTATaGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAAC | + |
Preference number: 3 (lower is better) Translates to: QLKQASLTDVGV*PPGLLRMREEN Trigger: GTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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3UTR CCA 72 bp | GTGGGGTGCAATCTACTGGTAGATACAGGTGTGCTGTaGCTGCAGACAGTGGGTGGGCAGAAGGGCAGACAG | + |
Preference number: 3 (lower is better) Translates to: VGCNLLVDTGVL*LQTVGGQKGRQ Trigger: CTGTCTGCCCTTCTGCCCACCCACTGTCTGCAGCCACAGCACACCTGTATCTACCAGTAGATTGCACCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | CAAGTCTTCTGGCTTTCCCATCCATGTCTGTGGAGCTaGAGCAACGGTACCTGGGGAGCACCGTGGAGACCA | + |
Preference number: 3 (lower is better) Translates to: QVFWLSHPCLWS*SNGTWGAPWRP Trigger: TGGTCTCCACGGTGCTCCCCAGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | CGTTGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTaGAGCTGGAGCAACGGTACCTGGGGAGCACCGTGG | + |
Preference number: 3 (lower is better) Translates to: RCQVFWLSHPCL*SWSNGTWGAPW Trigger: CCACGGTGCTCCCCAGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CAA 90 bp | GTGGAGCAAAGCTCTGTGCTTGCTTGGAGTGTGATGTTCTCTCCTCTGCACCTGGCAGCTAAGTGGGGGTaGGGGCACGATGCACCAATC | + |
Preference number: 3 (lower is better) Translates to: VEQSSVLAWSVMFSPLHLAAKWG*GHDAPI Trigger: GATTGGTGCATCGTGCCCCAACCCCCACTTAGCTGC...CAGGTGCAGAGGAGAGAACATCACACTCCAAGCAAGCACAGAGCTTTGCTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CCTGGCTCCTGGAGCAGTGCAGGCAGACTTCTCTTCTaGGAGGCCATTTTCAGGCTGAGACCTGCTAGAGAC | + |
Preference number: 3 (lower is better) Translates to: PGSWSSAGRLLF*EAIFRLRPARD Trigger: GTCTCTAGCAGGTCTCAGCCTGAAAATGGCCTCTCAGAAGAGAAGTCTGCCTGCACTGCTCCAGGAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | CCTCATTCCCTAGGATCCAGTTATCAGAGGGCCACCTaGCAACCATCTGACCATGGCCTTTCATTGGGCCCA | + |
Preference number: 3 (lower is better) Translates to: PHSLGSSYQRAT*QPSDHGLSLGP Trigger: TGGGCCCAATGAAAGGCCATGGTCAGATGGTTGGCAGGTGGCCCTCTGATAACTGGATCCTAGGGAATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | GTGTTCAAGTCCTCAACCTTGCCACTGCTACCAGGGTaGGGGATTTCCAGCTCAGACTTGCTCTCTGTTCCC | + |
Preference number: 3 (lower is better) Translates to: VFKSSTLPLLPG*GISSSDLLSVP Trigger: GGGAACAGAGAGCAAGTCTGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | TGTGAAACCGGAGCACACCCAGTCTCCAGGCTGTGGTaGAGATCGATCCACCGGGCCAATCAGAAATGTTCT | + |
Preference number: 3 (lower is better) Translates to: CETGAHPVSRLW*RSIHRANQKCS Trigger: AGAACATTTCTGATTGGCCCGGTGGATCGATCTCCACCACAGCCTGGAGACTGGGTGTGCTCCGGTTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CCACCTTGGCCTCTCCTGGTTGGAGGGAGCACAAGCTaGACTGAGGTTGCTTTGGCAAGATCTCTTACTGAG | + |
Preference number: 3 (lower is better) Translates to: PPWPLLVGGSTS*TEVALARSLTE Trigger: CTCAGTAAGAGATCTTGCCAAAGCAACCTCAGTTCAGCTTGTGCTCCCTCCAACCAGGAGAGGCCAAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CAGGCAGACTTCTCTTCTGAGAGGCCATTTTCAGGCTaGGACCTGCTAGAGACTCCGAGGCCACATCTCACA | + |
Preference number: 3 (lower is better) Translates to: QADFSSERPFSG*DLLETPRPHLT Trigger: TGTGAGATGTGGCCTCGGAGTCTCTAGCAGGTCTCAGCCTGAAAATGGCCTCTCAGAAGAGAAGTCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | CCGGGTAGAGCCAGTGTGAGACAAAGCCCTGGATACTaGCCTTGCTCTAAACATAGATCAATCCGGGCACAG | + |
Preference number: 3 (lower is better) Translates to: PGRASVRQSPGY*PCSKHRSIRAQ Trigger: CTGTGCCCGGATTGATCTATGTTTAGAGCAAGGGCAGTATCCAGGGCTTTGTCTCACACTGGCTCTACCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | GGCAGGTTCCAGCCTCCATCTTGTCAGTTCAGAGAATaGGAGACCTTGAACCTGCATCAACATGGCTCCCCT | + |
Preference number: 3 (lower is better) Translates to: GRFQPPSCQFRE*ETLNLHQHGSP Trigger: AGGGGAGCCATGTTGATGCAGGTTCAAGGTCTCCCATTCTCTGAACTGACAAGATGGAGGCTGGAACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | AATCACAAGGCACCTTCCATCCACCTTGGCCTCTCCTaGTTGGAGGGAGCACAAGCTGAACTGAGGTTGCTT | + |
Preference number: 3 (lower is better) Translates to: NHKAPSIHLGLS*LEGAQAELRLL Trigger: AAGCAACCTCAGTTCAGCTTGTGCTCCCTCCAACCAGGAGAGGCCAAGGTGGATGGAAGGTGCCTTGTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | TCGCCAGCTTCTTGCAGGGACACATCCTTCTTAAGTTaGAGCTGCTGCTTTCCTGCCCTTCACCCCTTGCTT | + |
Preference number: 3 (lower is better) Translates to: SPASCRDTSFLS*SCCFPALHPLL Trigger: AAGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAAGGATGTGTCCCTGCAAGAAGCTGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | GGGCCACCTGCCAACCATCTGACCATGGCCTTTCATTaGGCCCATCCCTTTCTGGATGTATGCTTGCTTTTG | + |
Preference number: 3 (lower is better) Translates to: GPPANHLTMAFH*AHPFLDVCLLL Trigger: CAAAAGCAAGCATACATCCAGAAAGGGATGGGCCCAATGAAAGGCCATGGTCAGATGGTTGGCAGGTGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | AGAGTCTCATATTTGCTGCTAGGACAGGGTGGCCATTaGGGAGTCTGTCTCCTCACCTGTGAAACCGGAGCA | + |
Preference number: 3 (lower is better) Translates to: RVSYLLLGQGGH*GVCLLTCETGA Trigger: TGCTCCGGTTTCACAGGTGAGGAGACAGACTCCTCAATGGCCACCCTGTCCTAGCAGCAAATATGAGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | GTATCTGCTATGTGTTCAAGTCCTCAACCTTGCCACTaGTACCAGGGTGGGGGATTTCCAGCTCAGACTTGC | + |
Preference number: 3 (lower is better) Translates to: VSAMCSSPQPCH*YQGGGFPAQTC Trigger: GCAAGTCTGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | ACCGTGGAGACCACTCTGAGCTCAGCACCTTACTGTTaGCTGCTCTCAGAGAACACAAAGGATAGGCTGACA | + |
Preference number: 3 (lower is better) Translates to: TVETTLSSAPYC*LLSENTKDRLT Trigger: TGTCAGCCTATCCTTTGTGTTCTCTGAGAGCAGCCAACAGTAAGGTGCTGAGCTCAGAGTGGTCTCCACGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCAGCTaGGAGGTAGGGTGGATAAAGGAACACCCCACAGTT | + |
Preference number: 3 (lower is better) Translates to: LSVSLSLSLSLS*EVGWIKEHPTV Trigger: AACTGTGGGGTGTTCCTTTATCCACCCTACCTCTCAGCTGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | GGGTTAGGGAGTAGAGCTTCCTTAGTTCCATTCCTATaGGAGGCATCCCCAGGGAGCTTCTTCAGTCTCTCT | + |
Preference number: 3 (lower is better) Translates to: GLGSRASLVPFL*EASPGSFFSLS Trigger: AGAGAGACTGAAGAAGCTCCCTGGGGATGCCTCTCATAGGAATGGAACTAAGGAAGCTCTACTCCCTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | GATGACGTCATAGCAGTCTGGGCTCTCACAACACCTTaGAATCCAGGTCTTTATAGGTTATGCTGGGCCTCC | + |
Preference number: 3 (lower is better) Translates to: DDVIAVWALTTP*NPGLYRLCWAS Trigger: GGAGGCCCAGCATAACCTATAAAGACCTGGATTGCAAGGTGTTGTGAGAGCCCAGACTGCTATGACGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | GGACACATCCTTCTTAAGTTGGAGCTGCTGCTTTCCTaGCCTTCACCCCTTGCTTTGCTTAGATCCCAGGAA | + |
Preference number: 3 (lower is better) Translates to: GHILLKLELLLS*PSPLALLRSQE Trigger: TTCCTGGGATCTAAGCAAAGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAAGGATGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | CCCCACAGTTTCTTCAGAGCCAGTGATCACACATGCTaGCATTCTATCTTAGCTTCGCCAGCTTCTTGCAGG | + |
Preference number: 3 (lower is better) Translates to: PHSFFRASDHTC*HSILASPASCR Trigger: CCTGCAAGAAGCTGGCGAAGCTAAGATAGAATGCCAGCATGTGTGATCACTGGCTCTGAAGAAACTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CCA 72 bp | GGTAGATACTGTGTGGAGCAAAGCTCTGTGCTTGCTTaGAGTGTGATGTTCTCTCCTCTGCACCTGTGGGAT | + |
Preference number: 3 (lower is better) Translates to: GRYCVEQSSVLA*SVMFSPLHLWD Trigger: ATCCCACAGGTGCAGAGGAGAGAACATCACACTCCAAGCAAGCACAGAGCTTTGCTCCACACAGTATCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CAA 90 bp | CAGGAAGCTGTGTGTGAAGGGCATTGCCATCAGAGCAGCATCCTTTTCCTATGTGCTGGGCCTCCCTGTTaGTATTTATGTCCTCCAGAA | + |
Preference number: 3 (lower is better) Translates to: QEAVCEGHCHQSSILFLCAGPPC*YLCPPE Trigger: TTCTGGAGGACATAAATACAAACAGGGAGGCCCAGC...ACATAGGAAAAGGATGCTGCTCTGATGGCAATGCCCTTCACACACAGCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CAA 90 bp | CTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCATTTCTGGATGTATGCTaGCTTTTGTCCACTGAGGGT | + |
Preference number: 3 (lower is better) Translates to: LRLHSVTQRCQVFWLSHPFLDVC*LLSTEG Trigger: ACCCTCAGTGGACAAAAGCAAGCATACATCCAGAAA...TGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | TTAATACATAAGACAGTTAAAGCAGGCGTCTCTGACTaGTGTGGGGGTATGGCCCCCAGGGCTTCTCCGAAT | + |
Preference number: 3 (lower is better) Translates to: LIHKTVKAGVSD*CGGMAPRASPN Trigger: ATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCTTATGTATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
||
3UTR TCA 72 bp | ACACAAAACAGGCTCAGAGGACTTCTGTGTGTTAACTaGCGTCACACAGGAAGAAGCCATTTAGCTGGGGCG | + |
Preference number: 3 (lower is better) Translates to: TQNRLRGLLCVN*RHTGRSHLAGA Trigger: CGCCCCAGCTAAATGGCTTCTTCCTGTGTGACGTCAGTTAACACACAGAAGTCCTCTGAGCCTGTTTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | GAGAGCCAAGGTGTACCCTGGGCAAATCAACCACAGTaGTGTTTCAAGCTTAGGTTTACAGGTGTCCCTGAC | + |
Preference number: 3 (lower is better) Translates to: ESQGVPWANQPQ*CFKLRFTGVPD Trigger: GTCAGGGACACCTGTAAACCTAAGCTTGAAACATCACTGTGGTTGATTTGCCCAGGGTACACCTTGGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR GCA 72 bp | TTCTATGTATCTGCTATGTGTTCAAGTCCTCAACCTTaGCACTGCTACCAGGGTGGGGGATTTCCAGCTCAG | + |
Preference number: 3 (lower is better) Translates to: FYVSAMCSSPQP*HCYQGGGFPAQ Trigger: CTGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATACATAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR GCA 72 bp | TCTTGCAGGGACACATCCTTCTTAAGTTGGAGCTGCTaGTTTCCTGCCCTTCACCCCTTGCTTTGCTTAGAT | + |
Preference number: 3 (lower is better) Translates to: SCRDTSFLSWSC*FPALHPLLCLD Trigger: ATCTAAGCAAAGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAAGGATGTGTCCCTGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR GCA 72 bp | ACATGCTGGCATTCTATCTTAGCTTCGCCAGCTTCTTaGAGGGACACATCCTTCTTAAGTTGGAGCTGCTGC | + |
Preference number: 3 (lower is better) Translates to: TCWHSILASPAS*RDTSFLSWSCC Trigger: GCAGCAGCTCCAACTTAAGAAGGATGTGTCCCTGCAAGAAGCTGGCGAAGCTAAGATAGAATGCCAGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR GCA 72 bp | ACACCCCACAGTTTCTTCAGAGCCAGTGATCACACATaGTGGCATTCTATCTTAGCTTCGCCAGCTTCTTGC | + |
Preference number: 3 (lower is better) Translates to: TPHSFFRASDHT*WHSILASPASC Trigger: GCAAGAAGCTGGCGAAGCTAAGATAGAATGCCAGCATGTGTGATCACTGGCTCTGAAGAAACTGTGGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR CCA 72 bp | AAACTACCATGCATGAGTCTGTTCAGAAGCAGAGAATaGGGCTCGCAGGACCAATCTCTAGGCATGTGGAAC | + |
Preference number: 3 (lower is better) Translates to: KLPCMSLFRSRE*GSQDQSLGMWN Trigger: GTTCCACATGCCTAGAGATTGGTCCTGCGAGCCCCATTCTCTGCTTCTGAACAGACTCATGCATGGTAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR TCA 72 bp | AGACTATGTCAGGTACTTTGGGAAAACTACCATGCATaGGTCTGTTCAGAAGCAGAGAATGGGGCTCGCAGG | + |
Preference number: 3 (lower is better) Translates to: RLCQVLWENYHA*VCSEAENGARR Trigger: CCTGCGAGCCCCATTCTCTGCTTCTGAACAGACTCATGCATGGTAGTTTTCCCAAAGTACCTGACATAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR CCA 72 bp | CAGCATCAATTCTTACTGTCTGCTCCCCATCACAGCTaGCTGTATGCTTATGCCCAATGTGCTAGCACAGAA | + |
Preference number: 3 (lower is better) Translates to: QHQFLLSAPHHS*LYAYAQCASTE Trigger: TTCTGTGCTAGCACATTGGGCATAAGCATACAGCCAGCTGTGATGGGGAGCAGACAGTAAGAATTGATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR CAA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCAGAGAATGGGAGACCTaGAACCTGCATCAACATGGC | + |
Preference number: 3 (lower is better) Translates to: SSIFPTCLPGTASILTVCREWET*NLHQHG Trigger: GCCATGTTGATGCAGGTTCAAGGTCTCCCATTCTCT...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR CAA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCGTTCCAGCCTCCATCTaGTCAGTTCAGAGAATGGGA | + |
Preference number: 3 (lower is better) Translates to: SSIFPTCLPGTASILTVCVPASI*SVQRMG Trigger: TCCCATTCTCTGAACTGACAAGATGGAGGCTGGAAC...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR-3UTR CAA 90 bp | CTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCAGAATTTAATGTCAGGTaGACTCTAAGGGAGTACACA | + |
Preference number: 3 (lower is better) Translates to: LRLHSVTQRCQVFWLSHPEFNVR*TLREYT Trigger: TGTGTACTCCCTTAGAGTCAACCTGACATTAAATTC...TGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR TCA 72 bp | TTTAGTGGGGGAAATGTCCATCTCCAGACTACCAGCTaGGCACAGGAAGTAGTCAAGGATTATGACTGCAGA | + |
Preference number: 3 (lower is better) Translates to: FSGGNVHLQTTS*AQEVVKDYDCR Trigger: TCTGCAGTCATAATCCTTGACTACTTCCTGTGCTCAGCTGGTAGTCTGGAGATGGACATTTCCCCCACTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR TCA 72 bp | CGAATGAGGGAGGAGAACCATAGATGGAAAGCTAAATaGTCAATCTACAGGGATGGTGGAAGAGACGCTTCG | + |
Preference number: 3 (lower is better) Translates to: RMREENHRWKAK*SIYRDGGRDAS Trigger: CGAAGCGTCTCTTCCACCATCCCTGTAGATTGATCATTTAGCTTTCCATCTATGGTTCTCCTCCCTCATTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR GCA 72 bp | TTGCTTAGATCCCAGGAAGCTGTGTGTGAAGGGCATTaGCATCAGAGCAGCATCCTTTTCCTATGTGCATTT | + |
Preference number: 3 (lower is better) Translates to: LLRSQEAVCEGH*HQSSILFLCAF Trigger: AAATGCACATAGGAAAAGGATGCTGCTCTGATGGCAATGCCCTTCACACACAGCTTCCTGGGATCTAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR GCA 72 bp | AGCCTAAGCTTATATCAGGCTCTGAGCCACTGGTATTaGTGTCTGCTTCAATCCTTTTCCTCTTTCAAGGGA | + |
Preference number: 3 (lower is better) Translates to: SLSLYQALSHWY*CLLQSFSSFKG Trigger: TCCCTTGAAAGAGGAAAAGGATTGAAGCAGACAGCAATACCAGTGGCTCAGAGCCTGATATAAGCTTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR GCA 72 bp | AAGCACGTCCAGACCAAGAAGCATTTTCTATGTATCTaGTATGTGTTCAAGTCCTCAACCTTGCCACTGCTA | + |
Preference number: 3 (lower is better) Translates to: KHVQTKKHFLCI*YVFKSSTLPLL Trigger: TAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATACATAGAAAATGCTTCTTGGTCTGGACGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
3UTR CCA 72 bp | CAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTaGAGAACAAGTACAGAGGCACGCGACGATTATATA | + |
Preference number: 3 (lower is better) Translates to: QEEIIYSRGSTR*RTSTEARDDYI Trigger: TATATAATCGTCGCGTGCCTCTGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
||
3UTR CCA 72 bp | ATTCATCCTTTCTTTCAGGGTTCCACATCTGTCACCTaGGCACTTAATTATGAAATTTCTGTCCCAGTTGCC | + |
Preference number: 3 (lower is better) Translates to: IHPFFQGSTSVT*ALNYEISVPVA Trigger: GGCAACTGGGACAGAAATTTCATAATTAAGTGCCCAGGTGACAGATGTGGAACCCTGAAAGAAAGGATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR-3UTR CAA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCAGCAGAAGGAGGAATTaGAATTCACTTTGGTTAAGA | + |
Preference number: 3 (lower is better) Translates to: SSIFPTCLPGTASILTVCSRRRN*NSLWLR Trigger: TCTTAACCAAAGTGAATTCAAATTCCTCCTTCTGCT...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
||
CDS-3UTR GCA 90 bp | AGACAGTTAAAGCAGGCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCGTGCCGTCCTTCTGTaGCAGCAGTCCCAGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: RQLKQASLTDVGVWPPGLRAVLL*QQSQGH Trigger: GTGACCCTGGGACTGCTGGCACAGAAGGACGGCACG...AAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | CTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACTGTCCGCACTCCTCTTaGTCAGGTAGCCTTTGCGCG | + |
Preference number: 4 (lower is better) Translates to: LTDVGVWPPGLLRMREENCPHSS*SGSLCA Trigger: CGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACA...GTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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3UTR CAA 72 bp | AGGCCAGGGAGGTACCCTGCAGCAGCTAAGTGGGGGTaGGGGCACGATGCACCAATCTCATTTCAGGAGACC | + |
Preference number: 4 (lower is better) Translates to: RPGRYPAAAKWG*GHDAPISFQET Trigger: GGTCTCCTGAAATGAGATTGGTGCATCGTGCCCCAACCCCCACTTAGCTGCTGCAGGGTACCTCCCTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | GCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGCAATTGCCACCAGCCTaGATGTTTTTGAGATCCTGG | + |
Preference number: 4 (lower is better) Translates to: ASLTDVGVWPPGLLRMREQLPPA*MFLRSW Trigger: CCAGGATCTCAAAAACATTCAGGCTGGTGGCAATTG...CTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | CTTGCCCTAGGTAGATACTGTGTGGAGCAAAGCTCTGTGCTTGCTTGGAGTGTGCGTGCCGTCCTTCTGTaGCAGCAGTCCCAGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: LALGRYCVEQSSVLAWSVRAVLL*QQSQGH Trigger: GTGACCCTGGGACTGCTGGCACAGAAGGACGGCACG...CACACTCCAAGCAAGCACAGAGCTTTGCTCCACACAGTATCTACCTAGGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR CCA 90 bp | AGACAGTTAAAGCAGGCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCTTTCCCATCCATGTCTGTaGAGCTGGAGCAACGGTACC | + |
Preference number: 4 (lower is better) Translates to: RQLKQASLTDVGVWPPGLSHPCL*SWSNGT Trigger: GGTACCGTTGCTCCAGCTCCACAGACATGGATGGGA...AAGCCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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3UTR CAA 72 bp | CACAAGGCACCTTCCATCCACCTTGGCCTCTCCTGGTaGGAGGGAGCACAAGCTGAACTGAGGTTGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: HKAPSIHLGLSW*EGAQAELRLLW Trigger: CCAAAGCAACCTCAGTTCAGCTTGTGCTCCCTCCAACCAGGAGAGGCCAAGGTGGATGGAAGGTGCCTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | CTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCATGTCCGCACTCCTCTTaGTCAGGTAGCCTTTGCGCG | + |
Preference number: 4 (lower is better) Translates to: LRLHSVTQRCQVFWLSHPCPHSS*SGSLCA Trigger: CGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACA...TGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR CCA 90 bp | GATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACCATAGAAATCTACAGGGATGGTaGAAGAGACGCTTCGACTCC | + |
Preference number: 4 (lower is better) Translates to: DVGVWPPGLLRMREENHRNLQGW*KRRFDS Trigger: GGAGTCGAAGCGTCTCTTCCACCATCCCTGTAGATT...TCTATGGTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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3UTR CAA 72 bp | TCTTTCAAGGGAATCACAAGGCACCTTCCATCCACCTaGGCCTCTCCTGGTTGGAGGGAGCACAAGCTGAAC | + |
Preference number: 4 (lower is better) Translates to: SFKGITRHLPST*ASPGWREHKLN Trigger: GTTCAGCTTGTGCTCCCTCCAACCAGGAGAGGCCAAGGTGGATGGAAGGTGCCTTGTGATTCCCTTGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 72 bp | TTCGCCAGCTTCTTGCAGGGACACATCCTTCTTAAGTaGGAGCTGCTGCTTTCCTGCCCTTCACCCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: FASFLQGHILLK*ELLLSCPSPLA Trigger: AGCAAGGGGTGAAGGGCAGGAAAGCAGCAGCTCCAACTTAAGAAGGATGTGTCCCTGCAAGAAGCTGGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 72 bp | GGAAGAGACGCTTCGACTCCACTCTGTCACGCAGCGTaGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTG | + |
Preference number: 4 (lower is better) Translates to: GRDASTPLCHAA*SSLLAFPSMSV Trigger: CACAGACATGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAGCGTCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | TACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGCCACCTGGTTCCTCTTaGGCATGCTGTCCGCGTGGG | + |
Preference number: 4 (lower is better) Translates to: YGTRRDNIFSGKHTLENKPPGSS*ACCPRG Trigger: CCCACGCGGACAGCATGCGCAAGAGGAACCAGGTGG...CTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGTGGCGAGGAGAACTTaGGGCTGGCGCGAGGGGACT | + |
Preference number: 4 (lower is better) Translates to: GTRRLYTIIVKQVFTEAAVARRT*GWREGT Trigger: AGTCCCCTCGCGCCAGCCGCAAGTTCTCCTCGCCAC...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGCCAGGGTGGGCCAGCTaGAGATACGGGCCTTCAGGC | + |
Preference number: 4 (lower is better) Translates to: HATIIYNNRKAGVHRSSWPGWAS*RYGPSG Trigger: GCCTGAAGGCCCGTATCTCCAGCTGGCCCACCCTGG...CCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CAA 72 bp | CATTGGGCCCATCCCTTTCTGGATGTATGCTTGCTTTaGTCCACTGAGGGTCACTGTCTCTGGGCATCCTCT | + |
Preference number: 4 (lower is better) Translates to: HWAHPFLDVCLL*STEGHCLWASS Trigger: AGAGGATGCCCAGAGACAGTGACCCTCAGTGGACAAAAGCAAGCATACATCCAGAAAGGGATGGGCCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 72 bp | AGGGCCACCTGCCAACCATCTGACCATGGCCTTTCATaGGGCCCATCCCTTTCTGGATGTATGCTTGCTTTT | + |
Preference number: 4 (lower is better) Translates to: RATCQPSDHGLS*GPSLSGCMLAF Trigger: AAAAGCAAGCATACATCCAGAAAGGGATGGGCCCAATGAAAGGCCATGGTCAGATGGTTGGCAGGTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | GGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACCATAGATGGAAACAGCCTGAATGTTTTTaGGATCCTGGTTGGTTGTCT | + |
Preference number: 4 (lower is better) Translates to: GVWPPGLLRMREENHRWKQPECF*DPGWLS Trigger: AGACAACCAACCAGGATCTCAAAAACATTCAGGCTG...TTTCCATCTATGGTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | GAGACGCTTCGACTCCACTCTGTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCAATTGCCACCAGCCTaGATGTTTTTGAGATCCTGG | + |
Preference number: 4 (lower is better) Translates to: ETLRLHSVTQRCQVFWLSQLPPA*MFLRSW Trigger: CCAGGATCTCAAAAACATTCAGGCTGGTGGCAATTG...GGAAAGCCAGAAGACTTGACAACGCTGCGTGACAGAGTGGAGTCGAAGCGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCCCTGGGTGTGCTTGGTaGCCCAGTGGCGGAGCACAT | + |
Preference number: 4 (lower is better) Translates to: QRHATIIYNNRKAGVHRSPGCAW*PSGGAH Trigger: ATGTGCTCCGCCACTGGGTCACCAAGCACACCCAGG...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACGGTAGCCTTTGCGCGTaGCGTCCTTCTGTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: GTRRDNIFSGKHTLENKYGSLCA*RPSVPA Trigger: TGCTGGCACAGAAGGACGGCACGCGCAAAGGCTACC...GTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACAGGTTCCTCTTGCGCATaGTGTCCGCGTGGGGAGACC | + |
Preference number: 4 (lower is better) Translates to: GQEEIIYSRGSTRWRTSTGSSCA*CPRGET Trigger: GGTCTCCCCACGCGGACAGCATGCGCAAGAGGAACC...TGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | ATAAGACAGTTAAAGCAGGCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGCGTTGTCAAGTCTTCTaGCTTTCCCATCCATGTCTG | + |
Preference number: 4 (lower is better) Translates to: IRQLKQASLTDVGVWPPGRCQVF*LSHPCL Trigger: CAGACATGGATGGGAAAGCCAGAAGACTTGACAACG...CCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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CDS-3UTR TCA 90 bp | TCTGATTCAGGTCACGTTACTGTTCAGGGCTGGGAAGAGAGGACGTCAGGGCTGCAGCCTGAATGTTTTTaGGATCCTGGTTGGTTGTCT | + |
Preference number: 4 (lower is better) Translates to: SDSGHVTVQGWEERTSGLQPECF*DPGWLS Trigger: AGACAACCAACCAGGATCTCAAAAACATTCAGGCTG...CAGCCCTGACGTCCTCTCTTCCCAGCCCTGAACAGTAACGTGACCTGAATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | GGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACCATAGATGGAAACCCAGTCAATTCAATTaGCACCAGCCTGAATGTTTT | + |
Preference number: 4 (lower is better) Translates to: GVWPPGLLRMREENHRWKPSQFN*HQPECF Trigger: AAAACATTCAGGCTGGTGGCAATTGAATTGACTGGG...TTTCCATCTATGGTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | GGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACCTTCTCGATGGCGCTTaGCCTTGCGCTGATGTCCTC | + |
Preference number: 4 (lower is better) Translates to: GTRRDNIFSGKHTLENKYLLDGA*PCADVL Trigger: GAGGACATCAGCGCAAGGGCAAGCGCCATCGAGAAG...GTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCTGGCGCACGAAGGTCTaGCTGGTGTCCAGGAGGATC | + |
Preference number: 4 (lower is better) Translates to: QRHATIIYNNRKAGVHRSWRTKV*LVSRRI Trigger: GATCCTCCTGGACACCAGCCAGACCTTCGTGCGCCA...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAGAGTTCCAGGGACCTaGCAGGAATCGCACTCATGG | + |
Preference number: 4 (lower is better) Translates to: RFYGTRRDNIFSGKHTLERVPGT*QESHSW Trigger: CCATGAGTGCGATTCCTGCCAGGTCCCTGGAACTCT...CTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CAA 72 bp | CAGCCTCCATCTTGTCAGTTCAGAGAATGGGAGACCTaGAACCTGCATCAACATGGCTCCCCTATTCCGTCT | + |
Preference number: 4 (lower is better) Translates to: QPPSCQFREWET*NLHQHGSPIPS Trigger: AGACGGAATAGGGGAGCCATGTTGATGCAGGTTCAAGGTCTCCCATTCTCTGAACTGACAAGATGGAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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3UTR CAA 72 bp | CTCTCCTGGTTGGAGGGAGCACAAGCTGAACTGAGGTaGCTTTGGCAAGATCTCTTACTGAGAAGCCAGCAT | + |
Preference number: 4 (lower is better) Translates to: LSWLEGAQAELR*LWQDLLLRSQH Trigger: ATGCTGGCTTCTCAGTAAGAGATCTTGCCAAAGCAACCTCAGTTCAGCTTGTGCTCCCTCCAACCAGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | GTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGACGGCCTCCAGCATGCTaGACACCACCTGGTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: VQRHATIIYNNRKAGVHRRPPAC*TPPGSS Trigger: AGAGGAACCAGGTGGTGTTCAGCATGCTGGAGGCCG...TCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | TATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCGGAAGGTCTCCAGTGTaGGCTCCTCGCAGTCTGGCT | + |
Preference number: 4 (lower is better) Translates to: YFGFTGQEEIIYSRGSTRGRSPV*APRSLA Trigger: AGCCAGACTGCGAGGAGCGCACACTGGAGACCTTCC...GCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | CGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGGAGTCTTGGGTAAGCTaGTGGCCATACAGAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: RFYGTRRDNIFSGKHTLEESWVS*WPYRAC Trigger: GCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTC...CTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACATCCAGCAGGGTCAGCTaGTCTGCTATCTCCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: GQEEIIYSRGSTRWRTSTSSRVS*SAISRA Trigger: AGCCCTGGAGATAGCAGAGCAGCTGACCCTGCTGGA...TGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCGCGCTCCTCGCAGTCTaGCTTGGCCTCGTACTGCTT | + |
Preference number: 4 (lower is better) Translates to: YFGFTGQEEIIYSRGSTRALLAV*LGLVLL Trigger: AAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGC...GCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | ACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGGGCACGAAGGTCTGGCTaGTGTCCAGGAGGATCTCAC | + |
Preference number: 4 (lower is better) Translates to: TRRLYTIIVKQVFTEAAGARRSG*CPGGSH Trigger: GTGAGATCCTCCTGGACACCAGCCAGACCTTCGTGC...CCCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTCTCCCCAGGCTTCTCTaGAATCGTGGCAGGCACATC | + |
Preference number: 4 (lower is better) Translates to: GTRRLYTIIVKQVFTEAALPRLL*NRGRHI Trigger: GATGTGCCTGCCACGATTCCAGAGAAGCCTGGGGAG...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CAA 72 bp | CACATGCTGGCATTCTATCTTAGCTTCGCCAGCTTCTaGCAGGGACACATCCTTCTTAAGTTGGAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: HMLAFYLSFASF*QGHILLKLELL Trigger: CAGCAGCTCCAACTTAAGAAGGATGTGTCCCTGCAAGAAGCTGGCGAAGCTAAGATAGAATGCCAGCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | CGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGTCAGACTTGATCATCTaGGGCACGGTGACCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: RFYGTRRDNIFSGKHTLESDLII*GTVTLE Trigger: TTCCAAGGTCACCGTGCCTCAGATGATCAAGTCTGA...CTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACATGCTGAACACCACCTaGTTCCTCTTGCGCATGCTG | + |
Preference number: 4 (lower is better) Translates to: GTRRDNIFSGKHTLENKYMLNTT*FLLRML Trigger: CAGCATGCGCAAGAGGAACCAGGTGGTGTTCAGCAT...GTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | ACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGGATCTGGAGGCTGTACTaGTGGTTGCGGACGAACTCC | + |
Preference number: 4 (lower is better) Translates to: TRRLYTIIVKQVFTEAAGIWRLY*WLRTNS Trigger: GGAGTTCGTCCGCAACCACCAGTACAGCCTCCAGAT...CCCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGGTGTCAGGATGTACCTaGGGATCTGGAACATTGGGT | + |
Preference number: 4 (lower is better) Translates to: RFYGTRRDNIFSGKHTLEVSGCT*GSGTLG Trigger: ACCCAATGTTCCAGATCCCCAGGTACATCCTGACAC...CTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGGATGGCCAAGGGCGGTaGCGAGGAGAACTTGCGGCT | + |
Preference number: 4 (lower is better) Translates to: QTFVFRFYGTRRDNIFSGDGQGR*RGELAA Trigger: AGCCGCAAGTTCTCCTCGCCACCGCCCTTGGCCATC...CCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CAA 72 bp | TTTCTATGTATCTGCTATGTGTTCAAGTCCTCAACCTaGCCACTGCTACCAGGGTGGGGGATTTCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: FLCICYVFKSST*PLLPGWGISSS Trigger: TGAGCTGGAAATCCCCCACCCTGGTAGCAGTGGCAAGGTTGAGGACTTGAACACATAGCAGATACATAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | TATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCACAAGGACATCTGCATaGGGGAACCTTGGCGCACGA | + |
Preference number: 4 (lower is better) Translates to: YFGFTGQEEIIYSRGSTRTRTSA*GNLGAR Trigger: TCGTGCGCCAAGGTTCCCTCATGCAGATGTCCTTGT...GCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | GTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGACTCTTGAAGACAAGGTaGTCCAGCAGGGTCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: VQRHATIIYNNRKAGVHRLLKTR*SSRVSC Trigger: GCAGCTGACCCTGCTGGATCACCTTGTCTTCAAGAG...TCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | CACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGTCATCTTGGAGAAGTTaGCCAGGCCGTCCTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: HATIIYNNRKAGVHRSSWSSWRS*PGRPLC Trigger: ACACAGAGGACGGCCTGGTCAACTTCTCCAAGATGA...CCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGACGTGCCGTCCTTCTGTaGCAGCAGTCCCAGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGRAVLL*QQSQGH Trigger: GTGACCCTGGGACTGCTGGCACAGAAGGACGGCACG...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GAACAAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTTGTCCGCACTCCTCTTaGTCAGGTAGCCTTTGCGCG | + |
Preference number: 4 (lower is better) Translates to: EQVQRHATIIYNNRKAGVCPHSS*SGSLCA Trigger: CGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACA...AACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAGGCTGTACTGGTGGTTaGGGACGAACTCCTGGTAGA | + |
Preference number: 4 (lower is better) Translates to: VQRHATIIYNNRKAGVHRGCTGG*GRTPGR Trigger: TCTACCAGGAGTTCGTCCGCAACCACCAGTACAGCC...TCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | TACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGAGTCCCGGTTTTGCTTaGAGTGAGCAAGGATCTGGA | + |
Preference number: 4 (lower is better) Translates to: YGTRRDNIFSGKHTLENKSPGFA*SEQGSG Trigger: TCCAGATCCTTGCTCACTGCAAGCAAAACCGGGACT...CTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | ACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGGTCAGACAAGGACATCTaGATGAGGGAACCTTGGCGC | + |
Preference number: 4 (lower is better) Translates to: TRRLYTIIVKQVFTEAAGSDKDI*MREPWR Trigger: GCGCCAAGGTTCCCTCATGCAGATGTCCTTGTCTGA...CCCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGGACATCAGAGCTATaGTTCCTGGAGGCTGAGAGC | + |
Preference number: 4 (lower is better) Translates to: QRHATIIYNNRKAGVHRSRTSEL*FLEAES Trigger: GCTCTCAGCCTCCAGGAAGCATAGCTCTGATGTCCT...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACGATTGGTGGCAGCTCTaGGGATCACAAACTCCTTGT | + |
Preference number: 4 (lower is better) Translates to: GTRRDNIFSGKHTLENKYDWWQL*GSQTPC Trigger: ACAAGGAGTTTGTGATCCGCAGAGCTGCCACCAATC...GTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACACCTGATGATGTTGGCTaGTGCCTTTCGCTCTTGGGT | + |
Preference number: 4 (lower is better) Translates to: GQEEIIYSRGSTRWRTSTPDDVG*CLSLLG Trigger: ACCCAAGAGCGAAAGGCAGCAGCCAACATCATCAGG...TGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAAGGATGTGTAGCTGCTaGACGTACTCAGCCTCGGCC | + |
Preference number: 4 (lower is better) Translates to: KYRGTRRLYTIIVKQVFTRMCSC*TYSASA Trigger: GGCCGAGGCTGAGTACGTCCAGCAGCTACACATCCT...TGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTTGAGGGGCCTTCATTaGCTCCTGCAGTCGCTATGG | + |
Preference number: 4 (lower is better) Translates to: YFGFTGQEEIIYSRGSTRLRGLH*LLQSLW Trigger: CCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAA...GCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCCATTCAGCACACGATTaGTGGCAGCTCTGCGGATCA | + |
Preference number: 4 (lower is better) Translates to: QRHATIIYNNRKAGVHRSHSAHD*WQLCGS Trigger: TGATCCGCAGAGCTGCCACCAATCGTGTGCTGAATG...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCATGCTATCTCCAGGGCTaGGTGGTTTTCGAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: RGTRRLYTIIVKQVFTEACYLQG*VVFEGL Trigger: GAGCCCTTCGAAAACCACCCAGCCCTGGAGATAGCA...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | GGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACAGAAGGGAGATATGGGTaGGTGTATGTTGGCGTAGCT | + |
Preference number: 4 (lower is better) Translates to: GQEEIIYSRGSTRWRTSTEGRYG*VYVGVA Trigger: AGCTACGCCAACATACACTCACCCATATCTCCCTTC...TGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GAAGGTCAAACACTTTATAGCATTAATATAGATGAGCTTTTCTGTGGAAGCCCAGGTAGCCTTTGCGCGTaGCGTCCTTCTGTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: EGQTLYSINIDELFCGSPGSLCA*RPSVPA Trigger: TGCTGGCACAGAAGGACGGCACGCGCAAAGGCTACC...TGGGCTTCCACAGAAAAGCTCATCTATATTAATGCTATAAAGTGTTTGACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | TTTTCCTCTTTCAAGGGAATCACAAGGCACCTTCCATCCACCTTGGCCTCTCCTCCCAGTCAATTCAATTaGCACCAGCCTGAATGTTTT | + |
Preference number: 4 (lower is better) Translates to: FSSFKGITRHLPSTLASPPSQFN*HQPECF Trigger: AAAACATTCAGGCTGGTGGCAATTGAATTGACTGGG...AGGAGAGGCCAAGGTGGATGGAAGGTGCCTTGTGATTCCCTTGAAAGAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCACATAGTCCAGGCTGTTaGGCTCCACATGCTCATGAG | + |
Preference number: 4 (lower is better) Translates to: RGTRRLYTIIVKQVFTEAHSPGC*APHAHE Trigger: CTCATGAGCATGTGGAGCGCAACAGCCTGGACTATG...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GAACAAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCGTAGCTATCGGAGCTaGACCCAAGGGAAGCCAGTT | + |
Preference number: 4 (lower is better) Translates to: EQVQRHATIIYNNRKAGVRSYRS*TQGKPV Trigger: AACTGGCTTCCCTTGGGTGCAGCTCCGATAGCTACG...AACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TCTAGCATTTTCCCCACTTGTCTTCCTGGGACAGCATCAATTCTTACTGTCTGCCTTGGTTTGCCATTTTaGGTTGTCCGCACTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: SSIFPTCLPGTASILTVCLGLPF*VVRTPL Trigger: AAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAG...GCAGACAGTAAGAATTGATGCTGTCCCAGGAAGACAAGTGGGGAAAATGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR CCA 90 bp | CAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGTGGAGGCTGTACTGGTaGTTGCGGACGAACTCCTGG | + |
Preference number: 4 (lower is better) Translates to: QTFVFRFYGTRRDNIFSGWRLYW*LRTNSW Trigger: CCAGGAGTTCGTCCGCAACCACCAGTACAGCCTCCA...CCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GAACAAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTTGGGCCAGCAGCTCATaGAGTGTCAGGATGTACCTG | + |
Preference number: 4 (lower is better) Translates to: EQVQRHATIIYNNRKAGVWASSS*SVRMYL Trigger: CAGGTACATCCTGACACTCCATGAGCTGCTGGCCCA...AACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCATGGCGTTGTGGCTGCTaGAAAACAAGAGTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: RGTRRLYTIIVKQVFTEAWRCGC*KTRVPG Trigger: CCCTGGAACTCTTGTTTTCCAGCAGCCACAACGCCA...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCATCTCCTCTGGAGTCTTaGGTAAGCTGCTGGCCATAC | + |
Preference number: 4 (lower is better) Translates to: RGTRRLYTIIVKQVFTEASPLES*VSCWPY Trigger: GTATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGA...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGCAGAGCTATGCTTCCTaGAGGCTGAGAGCTCCCCAG | + |
Preference number: 4 (lower is better) Translates to: QTFVFRFYGTRRDNIFSGQSYAS*RLRAPQ Trigger: CTGGGGAGCTCTCAGCCTCCAGGAAGCATAGCTCTG...CCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGATCAGCACACGATTGGTaGCAGCTCTGCGGATCACAA | + |
Preference number: 4 (lower is better) Translates to: VQRHATIIYNNRKAGVHRSAHDW*QLCGSQ Trigger: TTGTGATCCGCAGAGCTGCCACCAATCGTGTGCTGA...TCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CAA 72 bp | GAGCCTAAGCTTATATCAGGCTCTGAGCCACTGGTATaGCTGTCTGCTTCAATCCTTTTCCTCTTTCAAGGG | + |
Preference number: 4 (lower is better) Translates to: EPKLISGSEPLV*LSASILFLFQG Trigger: CCCTTGAAAGAGGAAAAGGATTGAAGCAGACAGCAATACCAGTGGCTCAGAGCCTGATATAAGCTTAGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR GCA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTCAATGGCCAGGTTTTTaGGGATGTTCTCGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: GTRRLYTIIVKQVFTEAAQWPGF*GCSRFH Trigger: GTGAAACCGAGAACATCCGCAAAAACCTGGCCATTG...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGCCAGATCACGACACGTaGTCATCAGGATTCCATTGT | + |
Preference number: 4 (lower is better) Translates to: HATIIYNNRKAGVHRSSWPDHDT*SSGFHC Trigger: ACAATGGAATCCTGATGACCACGTGTCGTGATCTGG...CCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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3UTR CAA 72 bp | GTATCGTGGGCATCATTTCCTACACAAAATTTGGTTTaGTGTTCTCAAGGACCTGGGGATCCATCCATCCAG | + |
Preference number: 4 (lower is better) Translates to: VSWASFPTQNLV*CSQGPGDPSIQ Trigger: CTGGATGGATGGATCCCCAGGTCCTTGAGAACACAAAACCAAATTTTGTGTAGGAAATGATGCCCACGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAGGAACATTGGGTAGGTaGGGAAGGTCTCCAGTGTGC | + |
Preference number: 4 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGGTLGR*GRSPVC Trigger: GCACACTGGAGACCTTCCTCACCTACCCAATGTTCC...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | GTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGACCTCCGTCATCAGTATaGCTTCTTCCAGCATGCTAT | + |
Preference number: 4 (lower is better) Translates to: VQRHATIIYNNRKAGVHRPPSSV*LLPACY Trigger: ATAGCATGCTGGAAGAAGTCATACTGATGACGGAGG...TCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GAGTGCAGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGAACAAGGATGTGTAGCTaGTGGACGTACTCAGCCTCG | + |
Preference number: 4 (lower is better) Translates to: ECRHLYFECRHLYFGFTGTRMCS*WTYSAS Trigger: CGAGGCTGAGTACGTCCAGCAGCTACACATCCTTGT...TCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCTGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCATTGTCTTCATCACTGTaGTTCTGGTCATCCTCGGAC | + |
Preference number: 4 (lower is better) Translates to: RGTRRLYTIIVKQVFTEALSSSL*FWSSSD Trigger: GTCCGAGGATGACCAGAACCACAGTGATGAAGACAA...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGATCTCCAGGGCTGGGTaGTTTTCGAAGGGCTCAGTC | + |
Preference number: 4 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSISRAG*FSKGSV Trigger: GACTGAGCCCTTCGAAAACCACCCAGCCCTGGAGAT...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GAGTGCAGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGAGCTTGGCGTTGTGGCTaGTGGAAAACAAGAGTTCCA | + |
Preference number: 4 (lower is better) Translates to: ECRHLYFECRHLYFGFTGAWRCG*WKTRVP Trigger: TGGAACTCTTGTTTTCCAGCAGCCACAACGCCAAGC...TCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCTGCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | TGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGATGATGTTGGCTGCTaGCTTTCGCTCTTGGGTCAG | + |
Preference number: 4 (lower is better) Translates to: CRHLYFGFTGQEEIIYSRDDVGC*LSLLGQ Trigger: CTGACCCAAGAGCGAAAGGCAGCAGCCAACATCATC...CCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GAACAAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCTTGGTTTGCCATTTTaGGTTGTCCGCACTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: EQVQRHATIIYNNRKAGVLGLPF*VVRTPL Trigger: AAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAG...AACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCAACTCCAAGGTCTTCTaGCTGTCATTGGAGAAGTTC | + |
Preference number: 4 (lower is better) Translates to: YFGFTGQEEIIYSRGSTRNSKVF*LSLEKF Trigger: GAACTTCTCCAATGACAGCCAGAAGACCTTGGAGTT...GCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGCAGGTGTTCTATCTCTaGTCCGGCTCCTTTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: CRHLYFGFTGQEEIIYSRQVFYL*SGSFGF Trigger: GAAGCCAAAGGAGCCGGACCAGAGATAGAACACCTG...CCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTTTGTCGATATTTCTCTaGTCAGAGGAAAAGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: GTRRLYTIIVKQVFTEAALSIFL*SEEKPV Trigger: CACAGGCTTTTCCTCTGACCAGAGAAATATCGACAA...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGGCTTGGCCTCGTACTaGTTGAGGAGCTTGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: RHLYFECRHLYFGFTGQEGLASY*LRSLSK Trigger: CTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCC...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | ACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGGGTGCAGATAATGAGATaGTTGGAGAATAGGAAACAC | + |
Preference number: 4 (lower is better) Translates to: TRRLYTIIVKQVFTEAAGVQIMR*LENRKH Trigger: GTGTTTCCTATTCTCCAAGCATCTCATTATCTGCAC...CCCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCGGATCTGAAGCACTTTaGAAGAATTCATGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: QRHATIIYNNRKAGVHRSGSEAL*KNSWFC Trigger: GCAAAACCATGAATTCTTGCAAAGTGCTTCAGATCC...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGAAGGTCTGGGTCATaGATGACCTCCTCCAGGAAA | + |
Preference number: 4 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGRRSGS*MTSSRK Trigger: TTTCCTGGAGGAGGTCATGCATGACCCAGACCTTCT...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | CAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGGCAGGGCAAACCACTTaGTTTGCCATTTTGGGTTGT | + |
Preference number: 4 (lower is better) Translates to: QTFVFRFYGTRRDNIFSGAGQTT*FAILGC Trigger: ACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGC...CCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAACAGTTCCTCTAGTTTaGATTTGGCATAGTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: KYRGTRRLYTIIVKQVFTTVPLV*IWHSPG Trigger: GCCTGGACTATGCCAAATCCAAACTAGAGGAACTGT...TGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAGAATAGGAAACACTaGCGCTCACCCTCTTTCTTA | + |
Preference number: 4 (lower is better) Translates to: KYRGTRRLYTIIVKQVFTENRKH*RSPSFL Trigger: TAAGAAAGAGGGTGAGCGCCAGTGTTTCCTATTCTC...TGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGTGCCGAAGGGAGATATaGGTGAGTGTATGTTGGCGT | + |
Preference number: 4 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSCRREI*VSVCWR Trigger: ACGCCAACATACACTCACCCATATCTCCCTTCGGCA...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGATGCCAGTGTCCAGTGTaGTTTTGCCGAAGGGAGATA | + |
Preference number: 4 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGCQCPV*FCRREI Trigger: TATCTCCCTTCGGCAAAACCACACTGGACACTGGCA...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGCTTCTCTGGAATCGTaGCAGGCACATCAATCTCCT | + |
Preference number: 4 (lower is better) Translates to: CRHLYFGFTGQEEIIYSRASLES*QAHQSP Trigger: AGGAGATTGATGTGCCTGCCACGATTCCAGAGAAGC...CCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | CACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGAATTCATGGTTTTGCTaGAGCGAATGTCAACATCAT | + |
Preference number: 4 (lower is better) Translates to: HATIIYNNRKAGVHRSSWNSWFC*SECQHH Trigger: ATGATGTTGACATTCGCTTCAGCAAAACCATGAATT...CCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGAAAGGCAGAAGTAGCTaGGAGAGTGCTGCGGTTATT | + |
Preference number: 4 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSKGRSS*ESAAVI Trigger: AATAACCGCAGCACTCTCTCAGCTACTTCTGCCTTT...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAATGGCCATACAGAGCTTaGCAGTGTCCAGTGTGGTTT | + |
Preference number: 4 (lower is better) Translates to: RHLYFECRHLYFGFTGQEWPYRA*QCPVWF Trigger: AAACCACACTGGACACTGGCAAGCTCTGTATGGCCA...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GAAGGTCAAACACTTTATAGCATTAATATAGATGAGCTTTTCTGTGGAAGCCCACTTGGTTTGCCATTTTaGGTTGTCCGCACTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: EGQTLYSINIDELFCGSPLGLPF*VVRTPL Trigger: AAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAG...TGGGCTTCCACAGAAAAGCTCATCTATATTAATGCTATAAAGTGTTTGACCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGCCCCGAAGGAAGCTCTaGACCTTCTTAATTTTCTTG | + |
Preference number: 4 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSPRRKL*TFLIFL Trigger: CAAGAAAATTAAGAAGGTTCAGAGCTTCCTTCGGGG...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGCAGAACCGGCTTTGTTaGTGGATTGGATACGATCAT | + |
Preference number: 4 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSQNRLC*WIGYDH Trigger: ATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTG...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TGTAGCGAAGGTCAAACACTTTATAGCATTAATATAGATGAGCTTTTCTGTGGAGCAGGGCAAACCACTTaGTTTGCCATTTTGGGTTGT | + |
Preference number: 4 (lower is better) Translates to: CSEGQTLYSINIDELFCGAGQTT*FAILGC Trigger: ACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGC...TCCACAGAAAAGCTCATCTATATTAATGCTATAAAGTGTTTGACCTTCGCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR CCA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAACCTCTAGTTTGGATTTaGCATAGTCCAGGCTGTTGC | + |
Preference number: 4 (lower is better) Translates to: RHLYFECRHLYFGFTGQEPLVWI*HSPGCC Trigger: GCAACAGCCTGGACTATGCCAAATCCAAACTAGAGG...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGAGGAAAAGCCTGTGTTaGCCAAAGACATCCTTCGAA | + |
Preference number: 4 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSRKSLC*PKTSFE Trigger: TTCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCT...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | GCTGAAGGGCATTTGGTGATAACTTGTAGCGAAGGTCAAACACTTTATAGCATTATGTTTTTGAGATCCTaGTTGGTTGTCTTCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: AEGHLVITCSEGQTLYSIMFLRS*LVVFSE Trigger: TTCTGAGAAGACAACCAACCAGGATCTCAAAAACAT...AATGCTATAAAGTGTTTGACCTTCGCTACAAGTTATCACCAAATGCCCTTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR TCA 90 bp | TGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGTGGAGAAGTTCACTGTaGAGTAATGTTGCTGTTTCT | + |
Preference number: 4 (lower is better) Translates to: CRHLYFGFTGQEEIIYSRWRSSL*SNVAVS Trigger: AGAAACAGCAACATTACTTCACAGTGAACTTCTCCA...CCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR TCA 90 bp | GAGTGCAGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGAGTTTCGGATAATTTCTaGAGCAATGAAGTTACTGAC | + |
Preference number: 4 (lower is better) Translates to: ECRHLYFECRHLYFGFTGVSDNF*SNEVTD Trigger: GTCAGTAACTTCATTGCTTCAGAAATTATCCGAAAC...TCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCTGCACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR GCA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAAGCAAAGATTTCGTCTaGTTAGAAACTTTGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: RHLYFECRHLYFGFTGQESKDFV*LETLSH Trigger: ATGGCTCAAAGTTTCTAAGCAGACGAAATCTTTGCT...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CCA 90 bp | TGTAGCGAAGGTCAAACACTTTATAGCATTAATATAGATGAGCTTTTCTGTGGAATGTTTTTGAGATCCTaGTTGGTTGTCTTCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: CSEGQTLYSINIDELFCGMFLRS*LVVFSE Trigger: TTCTGAGAAGACAACCAACCAGGATCTCAAAAACAT...TCCACAGAAAAGCTCATCTATATTAATGCTATAAAGTGTTTGACCTTCGCTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR CCA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAATCTCTCGGATAATATaGGAGATCATTCTCATCTTG | + |
Preference number: 4 (lower is better) Translates to: RHLYFECRHLYFGFTGQEISRII*EIILIL Trigger: CAAGATGAGAATGATCTCCCATATTATCCGAGAGAT...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | GATGATGGGGATGTTGAGGGACAGCTTCCGACGGCGGCTGGGGGATaGCGTCCCGATGGCCAAGGGCGGTGGCGAGGAGAACTTGCGGCT | + |
Preference number: 5 (lower is better) Translates to: DDGDVEGQLPTAAGG*RPDGQGRWRGELAA Trigger: AGCCGCAAGTTCTCCTCGCCACCGCCCTTGGCCATCGGGACGTCATCCCCCAGCCGCCGTCGGAAGCTGTCCCTCAACATCCCCATCATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 90 bp | CGCACTCCTCTTGCTCAGGTAGCCTTTGCGCGTGCCGTCCTTCTGTaGCAGCAGTCCCAGGGTCACGACGTGGCCATCGTTAAGCCGGAT | + |
Preference number: 5 (lower is better) Translates to: RTPLAQVAFARAVLL*QQSQGHDVAIVKPD Trigger: ATCCGGCTTAACGATGGCCACGTCGTGACCCTGGGACTGCTGGCACAGAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGAGGAGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS TCA 90 bp | TCTTGCGCATGCTGTCCGCGTGGGGAGACCGGATGTAGTCCTGGATaGTGTTCTTCCACTTTCGCCGGCACAGCCATCCCCGAAGGAAGC | + |
Preference number: 5 (lower is better) Translates to: SCACCPRGETGCSPG*CSSTFAGTAIPEGS Trigger: GCTTCCTTCGGGGATGGCTGTGCCGGCGAAAGTGGAAGAACATCATCCAGGACTACATCCGGTCTCCCCACGCGGACAGCATGCGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | TATGACGCTGTTTCTCGCCGGACTCCTTGGAGGAGGTCCCTCGCTTaGGGGAGGGCGCGCGTTTACAGATACTTCCCTCGAGCAGGTAGA | + |
Preference number: 5 (lower is better) Translates to: YDAVSRRTPWRRSLA*GRARVYRYFPRAGR Trigger: TCTACCTGCTCGAGGGAAGTATCTGTAAACGCGCGCCCTCCCCCAAGCGAGGGACCTCCTCCAAGGAGTCCGGCGAGAAACAGCGTCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS CCA 90 bp | GCAGCAGGATATCGAACAGGTCCGCCAGCACCAGGGTGGGCCAGCTaGAGATACGGGCCTTCAGGCCTTGGTAGAAGATCTGATGCAGGA | + |
Preference number: 5 (lower is better) Translates to: AAGYRTGPPAPGWAS*RYGPSGLGRRSDAG Trigger: TCCTGCATCAGATCTTCTACCAAGGCCTGAAGGCCCGTATCTCCAGCTGGCCCACCCTGGTGCTGGCGGACCTGTTCGATATCCTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 90 bp | TTTGCCATTTTGGGTTGTCCGCACTCCTCTTGCTCAGGTAGCCTTTaGGCGTGCCGTCCTTCTGTGCCAGCAGTCCCAGGGTCACGACGT | + |
Preference number: 5 (lower is better) Translates to: FAILGCPHSSCSGSL*ACRPSVPAVPGSRR Trigger: ACGTCGTGACCCTGGGACTGCTGGCACAGAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS GCA 90 bp | ACCTCCGTCTTCAGGCGCTCGATCTCAACCTCACCGTCCTCAAGCTaGTGGCGCAGCTGCTTAGCCACAGTCTTCTCTGTCTCCACTACC | + |
Preference number: 5 (lower is better) Translates to: TSVFRRSISTSPSSS*WRSCLATVFSVSTT Trigger: GGTAGTGGAGACAGAGAAGACTGTGGCTAAGCAGCTGCGCCAGCAGCTTGAGGACGGTGAGGTTGAGATCGAGCGCCTGAAGACGGAGGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | AATGTTGCTGTTTCTCGCCGGACTCCTTGGAGGAGGTCCCTCGCTTaGGGGAGGGCGCGCGTTTACAGATACTTCCCTCGAGCAGGTAGA | + |
Preference number: 5 (lower is better) Translates to: NVAVSRRTPWRRSLA*GRARVYRYFPRAGR Trigger: TCTACCTGCTCGAGGGAAGTATCTGTAAACGCGCGCCCTCCCCCAAGCGAGGGACCTCCTCCAAGGAGTCCGGCGAGAAACAGCAACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | TCCGTCTTCAGGCGCTCGATCTCAACCTCACCGTCCTCAAGCTGCTaGCGCAGCTGCTTAGCCACAGTCTTCTCTGTCTCCACTACCTGC | + |
Preference number: 5 (lower is better) Translates to: SVFRRSISTSPSSSC*RSCLATVFSVSTTC Trigger: GCAGGTAGTGGAGACAGAGAAGACTGTGGCTAAGCAGCTGCGCCAGCAGCTTGAGGACGGTGAGGTTGAGATCGAGCGCCTGAAGACGGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | ATGCGCAGTGGGCGCAGGAAGTTGTTGACAAGGATGTGTAGCTGCTaGACGTACTCAGCCTCGGCCTCCAGCATGCTGAACACCACCTGG | + |
Preference number: 5 (lower is better) Translates to: MRSGRRKLLTRMCSC*TYSASASSMLNTTW Trigger: CCAGGTGGTGTTCAGCATGCTGGAGGCCGAGGCTGAGTACGTCCAGCAGCTACACATCCTTGTCAACAACTTCCTGCGCCCACTGCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 90 bp | GGGCAAACCACTTGGTTTGCCATTTTGGGTTGTCCGCACTCCTCTTaGTCAGGTAGCCTTTGCGCGTGCCGTCCTTCTGTGCCAGCAGTC | + |
Preference number: 5 (lower is better) Translates to: GQTTWFAILGCPHSS*SGSLCACRPSVPAV Trigger: GACTGCTGGCACAGAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 90 bp | TACAGATACTTCCCTCGAGCAGGTAGAGCCCCGAGGGCCGAGGGCTaGAGTCGCTTTCGAAGTAGAAAAGCAGGTTCTGGAGCAGGGCAA | + |
Preference number: 5 (lower is better) Translates to: YRYFPRAGRAPRAEG*SRFRSRKAGSGAGQ Trigger: TTGCCCTGCTCCAGAACCTGCTTTTCTACTTCGAAAGCGACTCCAGCCCTCGGCCCTCGGGGCTCTACCTGCTCGAGGGAAGTATCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 90 bp | CATTGGGTAGGTGAGGAAGGTCTCCAGTGTGCGCTCCTCGCAGTCTaGCTTGGCCTCGTACTGCTTGAGGAGCTTGTCAAAGTCCCGGTT | + |
Preference number: 5 (lower is better) Translates to: HWVGEEGLQCALLAV*LGLVLLEELVKVPV Trigger: AACCGGGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCACACTGGAGACCTTCCTCACCTACCCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | GACAAGGTGATCCAGCAGGGTCAGCTGCTCTGCTATCTCCAGGGCTaGGTGGTTTTCGAAGGGCTCAGTCTTCACACCCTCCGTCATCAG | + |
Preference number: 5 (lower is better) Translates to: DKVIQQGQLLCYLQG*VVFEGLSLHTLRHQ Trigger: CTGATGACGGAGGGTGTGAAGACTGAGCCCTTCGAAAACCACCCAGCCCTGGAGATAGCAGAGCAGCTGACCCTGCTGGATCACCTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACGTTTGCCATTTTGGGTaGTCCGCACTCCTCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: LTDVGVWPPGLLRMREENVCHFG*SALLLL Trigger: GAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAAC...GTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR CAA 90 bp | GCTTTCCCATCCATGTCTGTGGAGCTGGAGCAACGGTACCTGGGGAGCACCGTGGGCAAACCACTTGGTTaGCCATTTTGGGTTGTCCGC | + |
Preference number: 5 (lower is better) Translates to: AFPSMSVELEQRYLGSTVGKPLG*PFWVVR Trigger: GCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCC...CACGGTGCTCCCCAGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS TCA 90 bp | TCTCCAGTGTGCGCTCCTCGCAGTCTGGCTTGGCCTCGTACTGCTTaGGGAGCTTGTCAAAGTCCCGGTTTTGCTTGCAGTGAGCAAGGA | + |
Preference number: 5 (lower is better) Translates to: SPVCAPRSLAWPRTA*GACQSPGFACSEQG Trigger: TCCTTGCTCACTGCAAGCAAAACCGGGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCACACTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACACTTGGTTTGCCATTTaGGGTTGTCCGCACTCCTCT | + |
Preference number: 5 (lower is better) Translates to: LTDVGVWPPGLLRMREENTWFAI*GCPHSS Trigger: AGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGT...GTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR CAA 90 bp | CTGACTGATGTGGGGGTATGGCCCCCAGGGCTTCTCCGAATGAGGGAGGAGAACAGCAGGGCAAACCACTaGGTTTGCCATTTTGGGTTG | + |
Preference number: 5 (lower is better) Translates to: LTDVGVWPPGLLRMREENSRANH*VCHFGL Trigger: CAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCT...GTTCTCCTCCCTCATTCGGAGAAGCCCTGGGGGCCATACCCCCACATCAGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS CCA 90 bp | GAAAAGCAGGTTCTGGAGCAGGGCAAACCACTTGGTTTGCCATTTTaGGTTGTCCGCACTCCTCTTGCTCAGGTAGCCTTTGCGCGTGCC | + |
Preference number: 5 (lower is better) Translates to: EKQVLEQGKPLGLPF*VVRTPLAQVAFARA Trigger: GGCACGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCTCCAGAACCTGCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 90 bp | GAGCCTCTGGTGCAGATAATGAGATGCTTGGAGAATAGGAAACACTaGCGCTCACCCTCTTTCTTAGTGGACAGAGACCCCAGGCGGCCC | + |
Preference number: 5 (lower is better) Translates to: EPLVQIMRCLENRKH*RSPSFLVDRDPRRP Trigger: GGGCCGCCTGGGGTCTCTGTCCACTAAGAAAGAGGGTGAGCGCCAGTGTTTCCTATTCTCCAAGCATCTCATTATCTGCACCAGAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | TCGTGGCAGGCACATCAATCTCCTCTGGAGTCTTGGGTAAGCTGCTaGCCATACAGAGCTTGCCAGTGTCCAGTGTGGTTTTGCCGAAGG | + |
Preference number: 5 (lower is better) Translates to: SWQAHQSPLESWVSC*PYRACQCPVWFCRR Trigger: CCTTCGGCAAAACCACACTGGACACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGATTGATGTGCCTGCCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | GCTTCTCTGGAATCGTGGCAGGCACATCAATCTCCTCTGGAGTCTTaGGTAAGCTGCTGGCCATACAGAGCTTGCCAGTGTCCAGTGTGG | + |
Preference number: 5 (lower is better) Translates to: ASLESWQAHQSPLES*VSCWPYRACQCPVW Trigger: CCACACTGGACACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGATTGATGTGCCTGCCACGATTCCAGAGAAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGTGGCGAGGAGAACTaGCGGCTGGCGCGAGGGGAC | + |
Preference number: 5 (lower is better) Translates to: GTRRLYTIIVKQVFTEAAGGEEN*RLARGD Trigger: GTCCCCTCGCGCCAGCCGCAAGTTCTCCTCGCCACC...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | GCCTTCATTGGCTCCTGCAGTCGCTATGGCAAAGGCAGAAGTAGCTaGGAGAGTGCTGCGGTTATTGTCCACCAGATCACGACACGTGGT | + |
Preference number: 5 (lower is better) Translates to: AFIGSCSRYGKGRSS*ESAAVIVHQITTRG Trigger: ACCACGTGTCGTGATCTGGTGGACAATAACCGCAGCACTCTCTCAGCTACTTCTGCCTTTGCCATAGCGACTGCAGGAGCCAATGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 90 bp | TGGTTCTGGTCATCCTCGGACTCTTCTTTCAGGACATCAGAGCTATaGTTCCTGGAGGCTGAGAGCTCCCCAGGCTTCTCTGGAATCGTG | + |
Preference number: 5 (lower is better) Translates to: WFWSSSDSSFRTSEL*FLEAESSPGFSGIV Trigger: CACGATTCCAGAGAAGCCTGGGGAGCTCTCAGCCTCCAGGAAGCATAGCTCTGATGTCCTGAAAGAAGAGTCCGAGGATGACCAGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | GTCCTTTGGCTCCACCCCGATCTTAAACTCCAGGTGTTCTATCTCTaGTCCGGCTCCTTTGGCTTCGTCGTCCAGGTTTTCGGGTTCATC | + |
Preference number: 5 (lower is better) Translates to: VLWLHPDLKLQVFYL*SGSFGFVVQVFGFI Trigger: GATGAACCCGAAAACCTGGACGACGAAGCCAAAGGAGCCGGACCAGAGATAGAACACCTGGAGTTTAAGATCGGGGTGGAGCCAAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | ATAAGACAGTTAAAGCAGGCGTCTCTGACTGATGTGGGGGTATGGCCCCCAGGGGGCAAACCACTTGGTTaGCCATTTTGGGTTGTCCGC | + |
Preference number: 5 (lower is better) Translates to: IRQLKQASLTDVGVWPPGGKPLG*PFWVVR Trigger: GCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCC...CCCTGGGGGCCATACCCCCACATCAGTCAGAGACGCCTGCTTTAACTGTCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS GCA 90 bp | AGGAATACTCTTGAAGACAAGGTGATCCAGCAGGGTCAGCTGCTCTaGTATCTCCAGGGCTGGGTGGTTTTCGAAGGGCTCAGTCTTCAC | + |
Preference number: 5 (lower is better) Translates to: RNTLEDKVIQQGQLL*YLQGWVVFEGLSLH Trigger: GTGAAGACTGAGCCCTTCGAAAACCACCCAGCCCTGGAGATAGCAGAGCAGCTGACCCTGCTGGATCACCTTGTCTTCAAGAGTATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | AAAGCCTGTGTTGGCCAAAGACATCCTTCGAAACACCTCCTTGTTTaGGGGGCCTTCATTGGCTCCTGCAGTCGCTATGGCAAAGGCAGA | + |
Preference number: 5 (lower is better) Translates to: KACVGQRHPSKHLLV*GAFIGSCSRYGKGR Trigger: TCTGCCTTTGCCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACACAGGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | AAACAGATCACCCTGTATTTGAGCGTATCGTCGGTATCAAAGTCCTaGGTGTGCTTGGTGACCCAGTGGCGGAGCACATTCAGCACACGA | + |
Preference number: 5 (lower is better) Translates to: KQITLYLSVSSVSKS*VCLVTQWRSTFSTR Trigger: TCGTGTGCTGAATGTGCTCCGCCACTGGGTCACCAAGCACACCCAGGACTTTGATACCGACGATACGCTCAAATACAGGGTGATCTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCCAGTTCCAGCGCCTaGCCGCCTGTGATGATGGGG | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEAASSSA*PPVMMG Trigger: CCCCATCATCACAGGCGGCAAGGCGCTGGAACTGGC...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | TCCTCAACTCCAAGGTCTTCTGGCTGTCATTGGAGAAGTTCACTGTaGAGTAATGTTGCTGTTTCTCGCCGGACTCCTTGGAGGAGGTCC | + |
Preference number: 5 (lower is better) Translates to: SSTPRSSGCHWRSSL*SNVAVSRRTPWRRS Trigger: GGACCTCCTCCAAGGAGTCCGGCGAGAAACAGCAACATTACTTCACAGTGAACTTCTCCAATGACAGCCAGAAGACCTTGGAGTTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | CAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTGGAGCTaGAGCAACGGTACCGATCTCTGTCCTAATTATGGAGAAGGAGAC | + |
Preference number: 5 (lower is better) Translates to: QRCQVFWLSHPCLWS*SNGTDLCPNYGEGD Trigger: GTCTCCTTCTCCATAATTAGGACAGAGATCGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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CDS CCA 90 bp | GTCACGCAGCGTTGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTaGAGCTGGAGCAACGGTACCGATCTCTGTCCTAATTATGGAGAA | + |
Preference number: 5 (lower is better) Translates to: VTQRCQVFWLSHPCL*SWSNGTDLCPNYGE Trigger: TTCTCCATAATTAGGACAGAGATCGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACGCTGCGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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CDS-3UTR CAA 90 bp | CTTGCCCTAGGTAGATACTGTGTGGAGCAAAGCTCTGTGCTTGCTTGGAGTGTGAGCAGGGCAAACCACTaGGTTTGCCATTTTGGGTTG | + |
Preference number: 5 (lower is better) Translates to: LALGRYCVEQSSVLAWSVSRANH*VCHFGL Trigger: CAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCT...CACACTCCAAGCAAGCACAGAGCTTTGCTCCACACAGTATCTACCTAGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189545.2 |
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CDS-3UTR CAA 90 bp | GGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACTCTGGTCCGGCTCCTTaGGCTTCGTCGTCCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: GTRRDNIFSGKHTLENKYSGPAP*ASSSRF Trigger: AAACCTGGACGACGAAGCCAAAGGAGCCGGACCAGA...GTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | TACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTGCTGCCTTTCGCTCTaGGGTCAGAAGGTCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: YGTRRDNIFSGKHTLENKCCLSL*GQKVWV Trigger: GACCCAGACCTTCTGACCCAAGAGCGAAAGGCAGCA...CTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGGTTTGCCATTTTGGGTaGTCCGCACTCCTCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: RFYGTRRDNIFSGKHTLEVCHFG*SALLLL Trigger: GAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAAC...CTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACAAAGATGGCGCTGCGGTaGATGGAGGAGGTGATCTCC | + |
Preference number: 5 (lower is better) Translates to: GQEEIIYSRGSTRWRTSTKMALR*MEEVIS Trigger: GGAGATCACCTCCTCCATCAACCGCAGCGCCATCTT...TGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | TTGGTGGCAGCTCTGCGGATCACAAACTCCTTGTCGATATTTCTCTaGTCAGAGGAAAAGCCTGTGTTGGCCAAAGACATCCTTCGAAAC | + |
Preference number: 5 (lower is better) Translates to: LVAALRITNSLSIFL*SEEKPVLAKDILRN Trigger: GTTTCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCTCTGACCAGAGAAATATCGACAAGGAGTTTGTGATCCGCAGAGCTGCCACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGTGATGATGGGGATGTaGAGGGACAGCTTCCGACGG | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEAVMMGM*RDSFRR Trigger: CCGTCGGAAGCTGTCCCTCAACATCCCCATCATCAC...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGCTGGCCATACAGAGCTaGCCAGTGTCCAGTGTGGTT | + |
Preference number: 5 (lower is better) Translates to: HATIIYNNRKAGVHRSSWLAIQS*PVSSVV Trigger: AACCACACTGGACACTGGCAAGCTCTGTATGGCCAG...CCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCCTCATCTTGGAGAAGTaGACCAGGCCGTCCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: QRHATIIYNNRKAGVHRSLILEK*TRPSSV Trigger: CACAGAGGACGGCCTGGTCAACTTCTCCAAGATGAG...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | CAAACTCCTTGTCGATATTTCTCTGGTCAGAGGAAAAGCCTGTGTTaGCCAAAGACATCCTTCGAAACACCTCCTTGTTTGAGGGGCCTT | + |
Preference number: 5 (lower is better) Translates to: QTPCRYFSGQRKSLC*PKTSFETPPCLRGL Trigger: AAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCTCTGACCAGAGAAATATCGACAAGGAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTGGGGCAAACCACTTGGTTaGCCATTTTGGGTTGTCCGC | + |
Preference number: 5 (lower is better) Translates to: HATIIYNNRKAGVHRSSWGKPLG*PFWVVR Trigger: GCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCC...CCAGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGGGCGCAGGAAGTTGTaGACAAGGATGTGTAGCTGC | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEAGRRKL*TRMCSC Trigger: GCAGCTACACATCCTTGTCAACAACTTCCTGCGCCC...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCTTGGCCTCGTACTGCTaGAGGAGCTTGTCAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: QRHATIIYNNRKAGVHRSLASYC*RSLSKS Trigger: GGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAA...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGTCCTCGCAGTCTGGCTaGGCCTCGTACTGCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: QTFVFRFYGTRRDNIFSGSSQSG*ASYCLR Trigger: CCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGA...CCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTATCTCCTCTGGAGTCTaGGGTAAGCTGCTGGCCATA | + |
Preference number: 5 (lower is better) Translates to: GTRRLYTIIVKQVFTEAAISSGV*GKLLAI Trigger: TATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGAT...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAAGTCCTGGGTGTGCTaGGTGACCCAGTGGCGGAGC | + |
Preference number: 5 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGKSWVC*VTQWRS Trigger: GCTCCGCCACTGGGTCACCAAGCACACCCAGGACTT...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTGGAGAACAAGTACAACTTGGTTTGCCATTTaGGGTTGTCCGCACTCCTCT | + |
Preference number: 5 (lower is better) Translates to: GQEEIIYSRGSTRWRTSTTWFAI*GCPHSS Trigger: AGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGT...TGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAGCTAGCAGGGCAAACCACTaGGTTTGCCATTTTGGGTTG | + |
Preference number: 5 (lower is better) Translates to: GTRRLYTIIVKQVFTEAASRANH*VCHFGL Trigger: CAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCT...AGCTGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAACCACCTGGTTCCTCTaGCGCATGCTGTCCGCGTGG | + |
Preference number: 5 (lower is better) Translates to: RHLYFECRHLYFGFTGQETTWFL*RMLSAW Trigger: CCACGCGGACAGCATGCGCAAGAGGAACCAGGTGGT...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAAGTGGGCGCAGGAAGTaGTTGACAAGGATGTGTAGC | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEASGRRK*LTRMCS Trigger: GCTACACATCCTTGTCAACAACTTCCTGCGCCCACT...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | GATGGCGCTTGCCCTTGCGCTGATGTCCTCGTTTCGGATAATTTCTaGAGCAATGAAGTTACTGACATGGTTGAAGTGTTTGGTGGTTTT | + |
Preference number: 5 (lower is better) Translates to: DGACPCADVLVSDNF*SNEVTDMVEVFGGF Trigger: AAAACCACCAAACACTTCAACCATGTCAGTAACTTCATTGCTTCAGAAATTATCCGAAACGAGGACATCAGCGCAAGGGCAAGCGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | GATTTAACTGGTGACACTTCTGTGTTGTCTTCATCACTGTGGTTCTaGTCATCCTCGGACTCTTCTTTCAGGACATCAGAGCTATGCTTC | + |
Preference number: 5 (lower is better) Translates to: DLTGDTSVLSSSLWF*SSSDSSFRTSELCF Trigger: GAAGCATAGCTCTGATGTCCTGAAAGAAGAGTCCGAGGATGACCAGAACCACAGTGATGAAGACAACACAGAAGTGTCACCAGTTAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GCTGAAGGGCATTTGGTGATAACTTGTAGCGAAGGTCAAACACTTTATAGCATTGTTTGCCATTTTGGGTaGTCCGCACTCCTCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: AEGHLVITCSEGQTLYSIVCHFG*SALLLL Trigger: GAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAAC...AATGCTATAAAGTGTTTGACCTTCGCTACAAGTTATCACCAAATGCCCTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS-3UTR CAA 90 bp | GAGTGCAGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGAACGGGCCTTCAGGCCTaGGTAGAAGATCTGATGCAG | + |
Preference number: 5 (lower is better) Translates to: ECRHLYFECRHLYFGFTGTGLQA*VEDLMQ Trigger: CTGCATCAGATCTTCTACCAAGGCCTGAAGGCCCGT...TCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCTGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCGAATGCAGGAAGGTGTaGAGAAAGTCAATGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: QRHATIIYNNRKAGVHRSECRKV*RKSMLR Trigger: CCTGAGCATTGACTTTCTCAACACCTTCCTGCATTC...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | GTTCGATTAGGAGCGAAGACTCATACAGGCTTTCTTCGTCCAACATaGAAGATTCATCCAGTAAGTACTGAATTACCTTTGGCTGGGGGT | + |
Preference number: 5 (lower is better) Translates to: VRLGAKTHTGFLRPT*KIHPVSTELPLAGG Trigger: ACCCCCAGCCAAAGGTAATTCAGTACTTACTGGATGAATCTTTCATGTTGGACGAAGAAAGCCTGTATGAGTCTTCGCTCCTAATCGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | ATGTCACTGTCCTCATCATCAGCAGAACCGGCTTTGTTGCTGGATTaGATACGATCATTGTCCTTGATCAGGTTTGTAATAGTTACCTCC | + |
Preference number: 5 (lower is better) Translates to: MSLSSSSAEPALLLD*IRSLSLIRFVIVTS Trigger: GGAGGTAACTATTACAAACCTGATCAAGGACAATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTGCTGATGATGAGGACAGTGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | TATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGAAGCACACGCTTCATCATGAGCCCATaGCAGCGGATATTATCCACG | + |
Preference number: 5 (lower is better) Translates to: YFGFTGQEEIIYSRGSTRFIMSP*QRILST Trigger: CGTGGATAATATCCGCTGCAATGGGCTCATGATGAA...GCGTGTGCTTCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCACGGATCACAAACTCCTaGTCGATATTTCTCTGGTCA | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEARITNS*SIFLWS Trigger: TGACCAGAGAAATATCGACAAGGAGTTTGTGATCCG...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGACATCTATATTTTGAGTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAACATTCAGCACACGATaGGTGGCAGCTCTGCGGATC | + |
Preference number: 5 (lower is better) Translates to: RHLYFECRHLYFGFTGQETFSTR*VAALRI Trigger: GATCCGCAGAGCTGCCACCAATCGTGTGCTGAATGT...TTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCACTCAAAATATAGATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | CAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCACAAGCTTTTGGAGCTaGTCAAGCAAAGATTTCGTC | + |
Preference number: 5 (lower is better) Translates to: QRHATIIYNNRKAGVHRSTSFWS*SSKDFV Trigger: GACGAAATCTTTGCTTGACAAGCTCCAAAAGCTTGT...GCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 90 bp | TGGCATAGCGGATCTGAAGCACTTTGCAAGAATTCATGGTTTTGCTaGAGCGAATGTCAACATCATCACAATATAAGGAAGCGTCAGACT | + |
Preference number: 5 (lower is better) Translates to: WHSGSEALCKNSWFC*SECQHHHNIRKRQT Trigger: AGTCTGACGCTTCCTTATATTGTGATGATGTTGACATTCGCTTCAGCAAAACCATGAATTCTTGCAAAGTGCTTCAGATCCGCTATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 90 bp | GACTCTCTGAGGTTCTTAAATCTGCCATCTGATGACACAAGCTTTTaGAGCTTGTCAAGCAAAGATTTCGTCTGCTTAGAAACTTTGAGC | + |
Preference number: 5 (lower is better) Translates to: DSLRFLNLPSDDTSF*SLSSKDFVCLETLS Trigger: GCTCAAAGTTTCTAAGCAGACGAAATCTTTGCTTGACAAGCTCCAAAAGCTTGTGTCATCAGATGGCAGATTTAAGAACCTCAGAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GTGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGAGGAAAAGCCTGTGTaGGCCAAAGACATCCTTCGA | + |
Preference number: 5 (lower is better) Translates to: VQTFVFRFYGTRRDNIFSEEKPV*AKDILR Trigger: TCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCTC...CGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCATGCTATGTTGTTCAGTaGTTTCTTCTAGGGTCAGAG | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEACYVVQ*FLLGSE Trigger: CTCTGACCCTAGAAGAAACAACTGAACAACATAGCA...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGATCAATGGCCAGGTTTTaGCGGATGTTCTCGGTTTCA | + |
Preference number: 5 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGSMARF*RMFSVS Trigger: TGAAACCGAGAACATCCGCAAAAACCTGGCCATTGA...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | GAACAAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCAGATAATGAGATGCTaGGAGAATAGGAAACACTGG | + |
Preference number: 5 (lower is better) Translates to: EQVQRHATIIYNNRKAGVQIMRC*ENRKHW Trigger: CCAGTGTTTCCTATTCTCCAAGCATCTCATTATCTG...AACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | TGCAGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGTGACACTTCTGTGTaGTCTTCATCACTGTGGTTC | + |
Preference number: 5 (lower is better) Translates to: CRHLYFGFTGQEEIIYSRGDTSV*SSSLWF Trigger: GAACCACAGTGATGAAGACAACACAGAAGTGTCACC...CCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGAAGCAACCTTCTTAATTTTCTaGATGTCACTGTCCTCATCA | + |
Preference number: 5 (lower is better) Translates to: RGTRRLYTIIVKQVFTEATFLIF*MSLSSS Trigger: TGATGAGGACAGTGACATCAAGAAAATTAAGAAGGT...TGCTTCTGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AAGTACAGAGGCACGCGACGATTATATACAATAATCGTAAAGCAGGTGTTCACAGTCTGCTTAGAAACTTaGAGCCATGTCTTTTTGAGA | + |
Preference number: 5 (lower is better) Translates to: KYRGTRRLYTIIVKQVFTVCLET*SHVFLR Trigger: TCTCAAAAAGACATGGCTCAAAGTTTCTAAGCAGAC...TGTGAACACCTGCTTTACGATTATTGTATATAATCGTCGCGTGCCTCTGTACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS-3UTR CAA 90 bp | AGACATTTGTATTTCGGTTTTACGGGACAAGAAGAGATAATATATTCTCGGGGACAAGAATTCATGGTTTaGCTGAAGCGAATGTCAACA | + |
Preference number: 5 (lower is better) Translates to: RHLYFGFTGQEEIIYSRGQEFMV*LKRMST Trigger: TGTTGACATTCGCTTCAGCAAAACCATGAATTCTTG...TCCCCGAGAATATATTATCTCTTCTTGTCCCGTAAAACCGAAATACAAATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | ACAGCTTCCGACGGCGGCTGGGGGATGACGTCCCGATaGCCAAGGGCGGTGGCGAGGAGAACTTGCGGCTGG | + |
Preference number: 6 (lower is better) Translates to: TASDGGWGMTSR*PRAVARRTCGW Trigger: CCAGCCGCAAGTTCTCCTCGCCACCGCCCTTGGCCATCGGGACGTCATCCCCCAGCCGCCGTCGGAAGCTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | GACGTCCCGATGGCCAAGGGCGGTGGCGAGGAGAACTaGCGGCTGGCGCGAGGGGACTTAGGGGCATCTCCG | + |
Preference number: 6 (lower is better) Translates to: DVPMAKGGGEEN*RLARGDLGASP Trigger: CGGAGATGCCCCTAAGTCCCCTCGCGCCAGCCGCAAGTTCTCCTCGCCACCGCCCTTGGCCATCGGGACGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | GATGTTGAGGGACAGCTTCCGACGGCGGCTGGGGGATaGCGTCCCGATGGCCAAGGGCGGTGGCGAGGAGAA | + |
Preference number: 6 (lower is better) Translates to: DVEGQLPTAAGG*RPDGQGRWRGE Trigger: TTCTCCTCGCCACCGCCCTTGGCCATCGGGACGTCATCCCCCAGCCGCCGTCGGAAGCTGTCCCTCAACATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | AGGGAAGCCAGTTCCAGCGCCTTGCCGCCTGTGATGATGGGGATGTaGAGGGACAGCTTCCGACGGCGGCTGGGGGATGACGTCCCGATG | + |
Preference number: 6 (lower is better) Translates to: REASSSALPPVMMGM*RDSFRRRLGDDVPM Trigger: CATCGGGACGTCATCCCCCAGCCGCCGTCGGAAGCTGTCCCTCAACATCCCCATCATCACAGGCGGCAAGGCGCTGGAACTGGCTTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | AGTTCCAGCGCCTTGCCGCCTGTGATGATGGGGATGTaGAGGGACAGCTTCCGACGGCGGCTGGGGGATGAC | + |
Preference number: 6 (lower is better) Translates to: SSSALPPVMMGM*RDSFRRRLGDD Trigger: GTCATCCCCCAGCCGCCGTCGGAAGCTGTCCCTCAACATCCCCATCATCACAGGCGGCAAGGCGCTGGAACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | CTTGCTCAGGTAGCCTTTGCGCGTGCCGTCCTTCTGTaGCAGCAGTCCCAGGGTCACGACGTGGCCATCGTT | + |
Preference number: 6 (lower is better) Translates to: LAQVAFARAVLL*QQSQGHDVAIV Trigger: AACGATGGCCACGTCGTGACCCTGGGACTGCTGGCACAGAAGGACGGCACGCGCAAAGGCTACCTGAGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 72 bp | TACTCAGCCTCGGCCTCCAGCATGCTGAACACCACCTaGTTCCTCTTGCGCATGCTGTCCGCGTGGGGAGAC | + |
Preference number: 6 (lower is better) Translates to: YSASASSMLNTT*FLLRMLSAWGD Trigger: GTCTCCCCACGCGGACAGCATGCGCAAGAGGAACCAGGTGGTGTTCAGCATGCTGGAGGCCGAGGCTGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | GCGCGAGCGATCGCAGCCACCCACTCGTCACAGTCCTaGGCATCCTCGGTCCTCAACTCCAAGGTCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: ARAIAATHSSQS*ASSVLNSKVFW Trigger: CCAGAAGACCTTGGAGTTGAGGACCGAGGATGCCAAGGACTGTGACGAGTGGGTGGCTGCGATCGCTCGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | TTCCCTCGAGCAGGTAGAGCCCCGAGGGCCGAGGGCTaGAGTCGCTTTCGAAGTAGAAAAGCAGGTTCTGGA | + |
Preference number: 6 (lower is better) Translates to: FPRAGRAPRAEG*SRFRSRKAGSG Trigger: TCCAGAACCTGCTTTTCTACTTCGAAAGCGACTCCAGCCCTCGGCCCTCGGGGCTCTACCTGCTCGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 72 bp | AGGCGCTCGATCTCAACCTCACCGTCCTCAAGCTGCTaGCGCAGCTGCTTAGCCACAGTCTTCTCTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: RRSISTSPSSSC*RSCLATVFSVS Trigger: GGAGACAGAGAAGACTGTGGCTAAGCAGCTGCGCCAGCAGCTTGAGGACGGTGAGGTTGAGATCGAGCGCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | TTCAGGCGCTCGATCTCAACCTCACCGTCCTCAAGCTaGTGGCGCAGCTGCTTAGCCACAGTCTTCTCTGTC | + |
Preference number: 6 (lower is better) Translates to: FRRSISTSPSSS*WRSCLATVFSV Trigger: GACAGAGAAGACTGTGGCTAAGCAGCTGCGCCAGCAGCTTGAGGACGGTGAGGTTGAGATCGAGCGCCTGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GGTGAGGAAGGTCTCCAGTGTGCGCTCCTCGCAGTCTaGCTTGGCCTCGTACTGCTTGAGGAGCTTGTCAAA | + |
Preference number: 6 (lower is better) Translates to: GEEGLQCALLAV*LGLVLLEELVK Trigger: TTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCACACTGGAGACCTTCCTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | ATCCAGCAGGGTCAGCTGCTCTGCTATCTCCAGGGCTaGGTGGTTTTCGAAGGGCTCAGTCTTCACACCCTC | + |
Preference number: 6 (lower is better) Translates to: IQQGQLLCYLQG*VVFEGLSLHTL Trigger: GAGGGTGTGAAGACTGAGCCCTTCGAAAACCACCCAGCCCTGGAGATAGCAGAGCAGCTGACCCTGCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | GTGCGCTCCTCGCAGTCTGGCTTGGCCTCGTACTGCTaGAGGAGCTTGTCAAAGTCCCGGTTTTGCTTGCAG | + |
Preference number: 6 (lower is better) Translates to: VRSSQSGLASYC*RSLSKSRFCLQ Trigger: CTGCAAGCAAAACCGGGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | AGGAAGGTCTCCAGTGTGCGCTCCTCGCAGTCTGGCTaGGCCTCGTACTGCTTGAGGAGCTTGTCAAAGTCC | + |
Preference number: 6 (lower is better) Translates to: RKVSSVRSSQSG*ASYCLRSLSKS Trigger: GGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCACACTGGAGACCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | TGCGCTCCTCGCAGTCTGGCTTGGCCTCGTACTGCTTaGGGAGCTTGTCAAAGTCCCGGTTTTGCTTGCAGT | + |
Preference number: 6 (lower is better) Translates to: CAPRSLAWPRTA*GACQSPGFACS Trigger: ACTGCAAGCAAAACCGGGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | TCAGGATGTACCTGGGGATCTGGAACATTGGGTAGGTaGGGAAGGTCTCCAGTGTGCGCTCCTCGCAGTCTG | + |
Preference number: 6 (lower is better) Translates to: SGCTWGSGTLGR*GRSPVCAPRSL Trigger: CAGACTGCGAGGAGCGCACACTGGAGACCTTCCTCACCTACCCAATGTTCCAGATCCCCAGGTACATCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | GCGTATCGTCGGTATCAAAGTCCTGGGTGTGCTTGGTaGCCCAGTGGCGGAGCACATTCAGCACACGATTGG | + |
Preference number: 6 (lower is better) Translates to: AYRRYQSPGCAW*PSGGAHSAHDW Trigger: CCAATCGTGTGCTGAATGTGCTCCGCCACTGGGTCACCAAGCACACCCAGGACTTTGATACCGACGATACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | ATCTCAACCTCACCGTCCTCAAGCTGCTGGCGCAGCTaGTTAGCCACAGTCTTCTCTGTCTCCACTACCTGC | + |
Preference number: 6 (lower is better) Translates to: ISTSPSSSCWRS*LATVFSVSTTC Trigger: GCAGGTAGTGGAGACAGAGAAGACTGTGGCTAAGCAGCTGCGCCAGCAGCTTGAGGACGGTGAGGTTGAGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | AGTGTGCGCTCCTCGCAGTCTGGCTTGGCCTCGTACTaGTTGAGGAGCTTGTCAAAGTCCCGGTTTTGCTTG | + |
Preference number: 6 (lower is better) Translates to: SVRSSQSGLASY*LRSLSKSRFCL Trigger: CAAGCAAAACCGGGACTTTGACAAGCTCCTCAAGCAGTACGAGGCCAAGCCAGACTGCGAGGAGCGCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GGGCATCTCCGTACAGAAGCTTGGCGTTGTGGCTGCTaGAAAACAAGAGTTCCAGGGACCTGGCAGGAATCG | + |
Preference number: 6 (lower is better) Translates to: GHLRTEAWRCGC*KTRVPGTWQES Trigger: CGATTCCTGCCAGGTCCCTGGAACTCTTGTTTTCCAGCAGCCACAACGCCAAGCTTCTGTACGGAGATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | TGGAGGCTGAGAGCTCCCCAGGCTTCTCTGGAATCGTaGCAGGCACATCAATCTCCTCTGGAGTCTTGGGTA | + |
Preference number: 6 (lower is better) Translates to: WRLRAPQASLES*QAHQSPLESWV Trigger: TACCCAAGACTCCAGAGGAGATTGATGTGCCTGCCACGATTCCAGAGAAGCCTGGGGAGCTCTCAGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTGGTGACCCAGTGGCGGAGCACATTCAGCACACGATaGGTGGCAGCTCTGCGGATCACAAACTCCTTGTCG | + |
Preference number: 6 (lower is better) Translates to: LVTQWRSTFSTR*VAALRITNSLS Trigger: CGACAAGGAGTTTGTGATCCGCAGAGCTGCCACCAATCGTGTGCTGAATGTGCTCCGCCACTGGGTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | TTCTTTCAGGACATCAGAGCTATGCTTCCTGGAGGCTaGGAGCTCCCCAGGCTTCTCTGGAATCGTGGCAGG | + |
Preference number: 6 (lower is better) Translates to: FFQDIRAMLPGG*ELPRLLWNRGR Trigger: CCTGCCACGATTCCAGAGAAGCCTGGGGAGCTCTCAGCCTCCAGGAAGCATAGCTCTGATGTCCTGAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | ACTTGGTTTGCCATTTTGGGTTGTCCGCACTCCTCTTaGTCAGGTAGCCTTTGCGCGTGCCGTCCTTCTGTG | + |
Preference number: 6 (lower is better) Translates to: TWFAILGCPHSS*SGSLCACRPSV Trigger: CACAGAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CAA 72 bp | GGAATCGTGGCAGGCACATCAATCTCCTCTGGAGTCTaGGGTAAGCTGCTGGCCATACAGAGCTTGCCAGTG | + |
Preference number: 6 (lower is better) Translates to: GIVAGTSISSGV*GKLLAIQSLPV Trigger: CACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGATTGATGTGCCTGCCACGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTGAGCGTATCGTCGGTATCAAAGTCCTGGGTGTGCTaGGTGACCCAGTGGCGGAGCACATTCAGCACACGA | + |
Preference number: 6 (lower is better) Translates to: LSVSSVSKSWVC*VTQWRSTFSTR Trigger: TCGTGTGCTGAATGTGCTCCGCCACTGGGTCACCAAGCACACCCAGGACTTTGATACCGACGATACGCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | AGAAAAGCAGGTTCTGGAGCAGGGCAAACCACTTGGTTTGCCATTTaGGGTTGTCCGCACTCCTCTTGCTCAGGTAGCCTTTGCGCGTGC | + |
Preference number: 6 (lower is better) Translates to: RKAGSGAGQTTWFAI*GCPHSSCSGSLCAC Trigger: GCACGCGCAAAGGCTACCTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCTCCAGAACCTGCTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CAA 90 bp | TGGGTGTGCTTGGTGACCCAGTGGCGGAGCACATTCAGCACACGATaGGTGGCAGCTCTGCGGATCACAAACTCCTTGTCGATATTTCTC | + |
Preference number: 6 (lower is better) Translates to: WVCLVTQWRSTFSTR*VAALRITNSLSIFL Trigger: GAGAAATATCGACAAGGAGTTTGTGATCCGCAGAGCTGCCACCAATCGTGTGCTGAATGTGCTCCGCCACTGGGTCACCAAGCACACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | CTGGAGTCTTGGGTAAGCTGCTGGCCATACAGAGCTTaGCAGTGTCCAGTGTGGTTTTGCCGAAGGGAGATA | + |
Preference number: 6 (lower is better) Translates to: LESWVSCWPYRA*QCPVWFCRREI Trigger: TATCTCCCTTCGGCAAAACCACACTGGACACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | CTCCACCCCGATCTTAAACTCCAGGTGTTCTATCTCTaGTCCGGCTCCTTTGGCTTCGTCGTCCAGGTTTTC | + |
Preference number: 6 (lower is better) Translates to: LHPDLKLQVFYL*SGSFGFVVQVF Trigger: GAAAACCTGGACGACGAAGCCAAAGGAGCCGGACCAGAGATAGAACACCTGGAGTTTAAGATCGGGGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GAATCGTGGCAGGCACATCAATCTCCTCTGGAGTCTTaGGTAAGCTGCTGGCCATACAGAGCTTGCCAGTGT | + |
Preference number: 6 (lower is better) Translates to: ESWQAHQSPLES*VSCWPYRACQC Trigger: ACACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGATTGATGTGCCTGCCACGATTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | ACCCTGTATTTGAGCGTATCGTCGGTATCAAAGTCCTaGGTGTGCTTGGTGACCCAGTGGCGGAGCACATTC | + |
Preference number: 6 (lower is better) Translates to: TLYLSVSSVSKS*VCLVTQWRSTF Trigger: GAATGTGCTCCGCCACTGGGTCACCAAGCACACCCAGGACTTTGATACCGACGATACGCTCAAATACAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | CTGGCCATACAGAGCTTGCCAGTGTCCAGTGTGGTTTaGCCGAAGGGAGATATGGGTGAGTGTATGTTGGCG | + |
Preference number: 6 (lower is better) Translates to: LAIQSLPVSSVV*PKGDMGECMLA Trigger: CGCCAACATACACTCACCCATATCTCCCTTCGGCAAAACCACACTGGACACTGGCAAGCTCTGTATGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TCTGGAGTCTTGGGTAAGCTGCTGGCCATACAGAGCTaGCCAGTGTCCAGTGTGGTTTTGCCGAAGGGAGAT | + |
Preference number: 6 (lower is better) Translates to: SGVLGKLLAIQS*PVSSVVLPKGD Trigger: ATCTCCCTTCGGCAAAACCACACTGGACACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | CAAGGTCTTCTGGCTGTCATTGGAGAAGTTCACTGTGAAGTAATGTaGCTGTTTCTCGCCGGACTCCTTGGAGGAGGTCCCTCGCTTGGG | + |
Preference number: 6 (lower is better) Translates to: QGLLAVIGEVHCEVM*LFLAGLLGGGPSLG Trigger: CCCAAGCGAGGGACCTCCTCCAAGGAGTCCGGCGAGAAACAGCAACATTACTTCACAGTGAACTTCTCCAATGACAGCCAGAAGACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | TGGCCATACAGAGCTTGCCAGTGTCCAGTGTGGTTTTaGCGAAGGGAGATATGGGTGAGTGTATGTTGGCGT | + |
Preference number: 6 (lower is better) Translates to: WPYRACQCPVWF*RREIWVSVCWR Trigger: ACGCCAACATACACTCACCCATATCTCCCTTCGGCAAAACCACACTGGACACTGGCAAGCTCTGTATGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | GGCGGAGCACATTCAGCACACGATTGGTGGCAGCTCTaGGGATCACAAACTCCTTGTCGATATTTCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: GGAHSAHDWWQL*GSQTPCRYFSG Trigger: ACCAGAGAAATATCGACAAGGAGTTTGTGATCCGCAGAGCTGCCACCAATCGTGTGCTGAATGTGCTCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GTTCTGGAGCAGGGCAAACCACTTGGTTTGCCATTTTaGGTTGTCCGCACTCCTCTTGCTCAGGTAGCCTTT | + |
Preference number: 6 (lower is better) Translates to: VLEQGKPLGLPF*VVRTPLAQVAF Trigger: AAAGGCTACCTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCTCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 72 bp | AGCTGCTGGCCATACAGAGCTTGCCAGTGTCCAGTGTaGTTTTGCCGAAGGGAGATATGGGTGAGTGTATGT | + |
Preference number: 6 (lower is better) Translates to: SCWPYRACQCPV*FCRREIWVSVC Trigger: ACATACACTCACCCATATCTCCCTTCGGCAAAACCACACTGGACACTGGCAAGCTCTGTATGGCCAGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GCACATCAATCTCCTCTGGAGTCTTGGGTAAGCTGCTaGCCATACAGAGCTTGCCAGTGTCCAGTGTGGTTT | + |
Preference number: 6 (lower is better) Translates to: AHQSPLESWVSC*PYRACQCPVWF Trigger: AAACCACACTGGACACTGGCAAGCTCTGTATGGCCAGCAGCTTACCCAAGACTCCAGAGGAGATTGATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | GAAAAGCAGGTTCTGGAGCAGGGCAAACCACTTGGTTaGCCATTTTGGGTTGTCCGCACTCCTCTTGCTCAG | + |
Preference number: 6 (lower is better) Translates to: EKQVLEQGKPLG*PFWVVRTPLAQ Trigger: CTGAGCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCTCCAGAACCTGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CAA 72 bp | CTGGCTGTCATTGGAGAAGTTCACTGTGAAGTAATGTaGCTGTTTCTCGCCGGACTCCTTGGAGGAGGTCCC | + |
Preference number: 6 (lower is better) Translates to: LAVIGEVHCEVM*LFLAGLLGGGP Trigger: GGGACCTCCTCCAAGGAGTCCGGCGAGAAACAGCAACATTACTTCACAGTGAACTTCTCCAATGACAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TGTTGGCCAAAGACATCCTTCGAAACACCTCCTTGTTaGAGGGGCCTTCATTGGCTCCTGCAGTCGCTATGG | + |
Preference number: 6 (lower is better) Translates to: CWPKTSFETPPC*RGLHWLLQSLW Trigger: CCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | GCCAAAGACATCCTTCGAAACACCTCCTTGTTTGAGGGGCCTTCATaGGCTCCTGCAGTCGCTATGGCAAAGGCAGAAGTAGCTGAGAGA | + |
Preference number: 6 (lower is better) Translates to: AKDILRNTSLFEGPS*APAVAMAKAEVAER Trigger: TCTCTCAGCTACTTCTGCCTTTGCCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | AAAAGCCTGTGTTGGCCAAAGACATCCTTCGAAACACCTCCTTGTTaGAGGGGCCTTCATTGGCTCCTGCAGTCGCTATGGCAAAGGCAG | + |
Preference number: 6 (lower is better) Translates to: KSLCWPKTSFETPPC*RGLHWLLQSLWQRQ Trigger: CTGCCTTTGCCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACACAGGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | GAGGAAAAGCCTGTGTTGGCCAAAGACATCCTTCGAAACACCTCCTaGTTTGAGGGGCCTTCATTGGCTCCTGCAGTCGCTATGGCAAAG | + |
Preference number: 6 (lower is better) Translates to: EEKPVLAKDILRNTS*FEGPSLAPAVAMAK Trigger: CTTTGCCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | TCTGGGTCATGCATGACCTCCTCCAGGAAACAGATCACCCTGTATTaGAGCGTATCGTCGGTATCAAAGTCCTGGGTGTGCTTGGTGACC | + |
Preference number: 6 (lower is better) Translates to: SGSCMTSSRKQITLY*SVSSVSKSWVCLVT Trigger: GGTCACCAAGCACACCCAGGACTTTGATACCGACGATACGCTCAAATACAGGGTGATCTGTTTCCTGGAGGAGGTCATGCATGACCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | AGGTGCAGTTTCCCACCAGAGCCTCTGGTGCAGATAATGAGATGCTaGGAGAATAGGAAACACTGGCGCTCACCCTCTTTCTTAGTGGAC | + |
Preference number: 6 (lower is better) Translates to: RCSFPPEPLVQIMRC*ENRKHWRSPSFLVD Trigger: GTCCACTAAGAAAGAGGGTGAGCGCCAGTGTTTCCTATTCTCCAAGCATCTCATTATCTGCACCAGAGGCTCTGGTGGGAAACTGCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | GTCGCTATGGCAAAGGCAGAAGTAGCTGAGAGAGTGCTGCGGTTATaGTCCACCAGATCACGACACGTGGTCATCAGGATTCCATTGTTG | + |
Preference number: 6 (lower is better) Translates to: VAMAKAEVAERVLRL*STRSRHVVIRIPLL Trigger: CAACAATGGAATCCTGATGACCACGTGTCGTGATCTGGTGGACAATAACCGCAGCACTCTCTCAGCTACTTCTGCCTTTGCCATAGCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | AGCTGCTTAGCCACAGTCTTCTCTGTCTCCACTACCTaGAGCAGGTGTAAGTACTTCTGCATAAGCGCCTCA | + |
Preference number: 6 (lower is better) Translates to: SCLATVFSVSTT*SRCKYFCISAS Trigger: TGAGGCGCTTATGCAGAAGTACTTACACCTGCTGCAGGTAGTGGAGACAGAGAAGACTGTGGCTAAGCAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | AGTAGAAAAGCAGGTTCTGGAGCAGGGCAAACCACTTaGTTTGCCATTTTGGGTTGTCCGCACTCCTCTTGC | + |
Preference number: 6 (lower is better) Translates to: SRKAGSGAGQTT*FAILGCPHSSC Trigger: GCAAGAGGAGTGCGGACAACCCAAAATGGCAAACCAAGTGGTTTGCCCTGCTCCAGAACCTGCTTTTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034909.11 ENSMUST00000034912.6 ENSMUST00000189545.2 |
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CDS CCA 72 bp | CGTTGTCAAGTCTTCTGGCTTTCCCATCCATGTCTGTaGAGCTGGAGCAACGGTACCGATCTCTGTCCTAAT | + |
Preference number: 6 (lower is better) Translates to: RCQVFWLSHPCL*SWSNGTDLCPN Trigger: ATTAGGACAGAGATCGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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CDS CAA 72 bp | TTCCCACCAGAGCCTCTGGTGCAGATAATGAGATGCTaGGAGAATAGGAAACACTGGCGCTCACCCTCTTTC | + |
Preference number: 6 (lower is better) Translates to: FPPEPLVQIMRC*ENRKHWRSPSF Trigger: GAAAGAGGGTGAGCGCCAGTGTTTCCTATTCTCCAAGCATCTCATTATCTGCACCAGAGGCTCTGGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTAAACTCCAGGTGTTCTATCTCTGGTCCGGCTCCTTaGGCTTCGTCGTCCAGGTTTTCGGGTTCATCCAGT | + |
Preference number: 6 (lower is better) Translates to: LNSRCSISGPAP*ASSSRFSGSSS Trigger: ACTGGATGAACCCGAAAACCTGGACGACGAAGCCAAAGGAGCCGGACCAGAGATAGAACACCTGGAGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | GCAAAGGCAGAAGTAGCTGAGAGAGTGCTGCGGTTATaGTCCACCAGATCACGACACGTGGTCATCAGGATT | + |
Preference number: 6 (lower is better) Translates to: AKAEVAERVLRL*STRSRHVVIRI Trigger: AATCCTGATGACCACGTGTCGTGATCTGGTGGACAATAACCGCAGCACTCTCTCAGCTACTTCTGCCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | ATCCTTCGAAACACCTCCTTGTTTGAGGGGCCTTCATaGGCTCCTGCAGTCGCTATGGCAAAGGCAGAAGTA | + |
Preference number: 6 (lower is better) Translates to: ILRNTSLFEGPS*APAVAMAKAEV Trigger: TACTTCTGCCTTTGCCATAGCGACTGCAGGAGCCAATGAAGGCCCCTCAAACAAGGAGGTGTTTCGAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TGCATGACCTCCTCCAGGAAACAGATCACCCTGTATTaGAGCGTATCGTCGGTATCAAAGTCCTGGGTGTGC | + |
Preference number: 6 (lower is better) Translates to: CMTSSRKQITLY*SVSSVSKSWVC Trigger: GCACACCCAGGACTTTGATACCGACGATACGCTCAAATACAGGGTGATCTGTTTCCTGGAGGAGGTCATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | CCAAGGTCTTCTGGCTGTCATTGGAGAAGTTCACTGTaGAGTAATGTTGCTGTTTCTCGCCGGACTCCTTGG | + |
Preference number: 6 (lower is better) Translates to: PRSSGCHWRSSL*SNVAVSRRTPW Trigger: CCAAGGAGTCCGGCGAGAAACAGCAACATTACTTCACAGTGAACTTCTCCAATGACAGCCAGAAGACCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | CAAGTCTTCTGGCTTTCCCATCCATGTCTGTGGAGCTaGAGCAACGGTACCGATCTCTGTCCTAATTATGGA | + |
Preference number: 6 (lower is better) Translates to: QVFWLSHPCLWS*SNGTDLCPNYG Trigger: TCCATAATTAGGACAGAGATCGGTACCGTTGCTCCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034909.11 |
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CDS CCA 72 bp | GTGCAGATAATGAGATGCTTGGAGAATAGGAAACACTaGCGCTCACCCTCTTTCTTAGTGGACAGAGACCCC | + |
Preference number: 6 (lower is better) Translates to: VQIMRCLENRKH*RSPSFLVDRDP Trigger: GGGGTCTCTGTCCACTAAGAAAGAGGGTGAGCGCCAGTGTTTCCTATTCTCCAAGCATCTCATTATCTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | CGTTGTGGCTGCTGGAAAACAAGAGTTCCAGGGACCTaGCAGGAATCGCACTCATGGGTTTTCTGTAGATAT | + |
Preference number: 6 (lower is better) Translates to: RCGCWKTRVPGT*QESHSWVFCRY Trigger: ATATCTACAGAAAACCCATGAGTGCGATTCCTGCCAGGTCCCTGGAACTCTTGTTTTCCAGCAGCCACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | ACACGATTGGTGGCAGCTCTGCGGATCACAAACTCCTaGTCGATATTTCTCTGGTCAGAGGAAAAGCCTGTG | + |
Preference number: 6 (lower is better) Translates to: TRLVAALRITNS*SIFLWSEEKPV Trigger: CACAGGCTTTTCCTCTGACCAGAGAAATATCGACAAGGAGTTTGTGATCCGCAGAGCTGCCACCAATCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TCAGTTGTTTCTTCTAGGGTCAGAGTCCTGATGATGTaGGCTGCTGCCTTTCGCTCTTGGGTCAGAAGGTCT | + |
Preference number: 6 (lower is better) Translates to: SVVSSRVRVLMM*AAAFRSWVRRS Trigger: AGACCTTCTGACCCAAGAGCGAAAGGCAGCAGCCAACATCATCAGGACTCTGACCCTAGAAGAAACAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS GCA 72 bp | TCTGTCTCCACTACCTGCAGCAGGTGTAAGTACTTCTaGATAAGCGCCTCATGTTCTGTAGCCAGTATCTTG | + |
Preference number: 6 (lower is better) Translates to: SVSTTCSRCKYF*ISASCSVASIL Trigger: CAAGATACTGGCTACAGAACATGAGGCGCTTATGCAGAAGTACTTACACCTGCTGCAGGTAGTGGAGACAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GGTGACACTTCTGTGTTGTCTTCATCACTGTGGTTCTaGTCATCCTCGGACTCTTCTTTCAGGACATCAGAG | + |
Preference number: 6 (lower is better) Translates to: GDTSVLSSSLWF*SSSDSSFRTSE Trigger: CTCTGATGTCCTGAAAGAAGAGTCCGAGGATGACCAGAACCACAGTGATGAAGACAACACAGAAGTGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GCTCTGCGGATCACAAACTCCTTGTCGATATTTCTCTaGTCAGAGGAAAAGCCTGTGTTGGCCAAAGACATC | + |
Preference number: 6 (lower is better) Translates to: ALRITNSLSIFL*SEEKPVLAKDI Trigger: GATGTCTTTGGCCAACACAGGCTTTTCCTCTGACCAGAGAAATATCGACAAGGAGTTTGTGATCCGCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | GTCGGTGAGATACATCCCCAGGTAAGGGACACAGGGTaGATCACAATTTCTCAAAGACTCTCTGAGGTTCTT | + |
Preference number: 6 (lower is better) Translates to: VGEIHPQVRDTG*ITISQRLSEVL Trigger: AAGAACCTCAGAGAGTCTTTGAGAAATTGTGATCCACCCTGTGTCCCTTACCTGGGGATGTATCTCACCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | GATTTCGTCTGCTTAGAAACTTTGAGCCATGTCTTTTaGAGACGGAAGATGGCGCTGCGGTTGATGGAGGAG | + |
Preference number: 6 (lower is better) Translates to: DFVCLETLSHVF*RRKMALRLMEE Trigger: CTCCTCCATCAACCGCAGCGCCATCTTCCGTCTCAAAAAGACATGGCTCAAAGTTTCTAAGCAGACGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | ACGGTGACCTTGGAATTTTCTTCAAAGGCATTCATCATGAGCCCATaGCAGCGGATATTATCCACGCACTGGATGATGTCACTGGTCCAT | + |
Preference number: 6 (lower is better) Translates to: TVTLEFSSKAFIMSP*QRILSTHWMMSLVH Trigger: ATGGACCAGTGACATCATCCAGTGCGTGGATAATATCCGCTGCAATGGGCTCATGATGAATGCCTTTGAAGAAAATTCCAAGGTCACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | CGAAGGGCTCAGTCTTCACACCCTCCGTCATCAGTATaGCTTCTTCCAGCATGCTATGTTGTTCAGTTGTTT | + |
Preference number: 6 (lower is better) Translates to: RRAQSSHPPSSV*LLPACYVVQLF Trigger: AAACAACTGAACAACATAGCATGCTGGAAGAAGTCATACTGATGACGGAGGGTGTGAAGACTGAGCCCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | ATGTCACTGTCCTCATCATCAGCAGAACCGGCTTTGTaGCTGGATTGGATACGATCATTGTCCTTGATCAGG | + |
Preference number: 6 (lower is better) Translates to: MSLSSSSAEPAL*LDWIRSLSLIR Trigger: CCTGATCAAGGACAATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTGCTGATGATGAGGACAGTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | AACGATTTTGGTGTTGGTGGGGATTTAACTGGTGACACTTCTGTGTaGTCTTCATCACTGTGGTTCTGGTCATCCTCGGACTCTTCTTTC | + |
Preference number: 6 (lower is better) Translates to: NDFGVGGDLTGDTSV*SSSLWFWSSSDSSF Trigger: GAAAGAAGAGTCCGAGGATGACCAGAACCACAGTGATGAAGACAACACAGAAGTGTCACCAGTTAAATCCCCACCAACACCAAAATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | TGGCTGTCATCCCAGTCAATTCAATTGCCACCAGCCTaGATGTTTTTGAGATCCTGGTTGGTTGTCTTCTCA | + |
Preference number: 6 (lower is better) Translates to: WLSSQSIQLPPA*MFLRSWLVVFS Trigger: TGAGAAGACAACCAACCAGGATCTCAAAAACATTCAGGCTGGTGGCAATTGAATTGACTGGGATGACAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS CCA 72 bp | TGTCGATATTTCTCTGGTCAGAGGAAAAGCCTGTGTTaGCCAAAGACATCCTTCGAAACACCTCCTTGTTTG | + |
Preference number: 6 (lower is better) Translates to: CRYFSGQRKSLC*PKTSFETPPCL Trigger: CAAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCTCTGACCAGAGAAATATCGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTGATGTCACTGTCCTCATCATCAGCAGAACCGGCTTaGTTGCTGGATTGGATACGATCATTGTCCTTGATC | + |
Preference number: 6 (lower is better) Translates to: LMSLSSSSAEPA*LLDWIRSLSLI Trigger: GATCAAGGACAATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTGCTGATGATGAGGACAGTGACATCAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | GATGTCACTGTCCTCATCATCAGCAGAACCGGCTTTGTTGCTGGATaGGATACGATCATTGTCCTTGATCAGGTTTGTAATAGTTACCTC | + |
Preference number: 6 (lower is better) Translates to: DVTVLIISRTGFVAG*DTIIVLDQVCNSYL Trigger: GAGGTAACTATTACAAACCTGATCAAGGACAATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTGCTGATGATGAGGACAGTGACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | CCCAGTCAATTCAATTGCCACCAGCCTGAATGTTTTTaGGATCCTGGTTGGTTGTCTTCTCAGAACATTACG | + |
Preference number: 6 (lower is better) Translates to: PSQFNCHQPECF*DPGWLSSQNIT Trigger: CGTAATGTTCTGAGAAGACAACCAACCAGGATCTCAAAAACATTCAGGCTGGTGGCAATTGAATTGACTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034909.11 ENSMUST00000189545.2 |
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CDS CAA 72 bp | GTCCTCATCATCAGCAGAACCGGCTTTGTTGCTGGATaGGATACGATCATTGTCCTTGATCAGGTTTGTAAT | + |
Preference number: 6 (lower is better) Translates to: VLIISRTGFVAG*DTIIVLDQVCN Trigger: ATTACAAACCTGATCAAGGACAATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTGCTGATGATGAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTGTCGATATTTCTCTGGTCAGAGGAAAAGCCTGTGTaGGCCAAAGACATCCTTCGAAACACCTCCTTGTTT | + |
Preference number: 6 (lower is better) Translates to: LSIFLWSEEKPV*AKDILRNTSLF Trigger: AAACAAGGAGGTGTTTCGAAGGATGTCTTTGGCCAACACAGGCTTTTCCTCTGACCAGAGAAATATCGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | AGCTTGTCAAGCAAAGATTTCGTCTGCTTAGAAACTTaGAGCCATGTCTTTTTGAGACGGAAGATGGCGCTG | + |
Preference number: 6 (lower is better) Translates to: SLSSKDFVCLET*SHVFLRRKMAL Trigger: CAGCGCCATCTTCCGTCTCAAAAAGACATGGCTCAAAGTTTCTAAGCAGACGAAATCTTTGCTTGACAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | TGCCCTTGCGCTGATGTCCTCGTTTCGGATAATTTCTaGAGCAATGAAGTTACTGACATGGTTGAAGTGTTT | + |
Preference number: 6 (lower is better) Translates to: CPCADVLVSDNF*SNEVTDMVEVF Trigger: AAACACTTCAACCATGTCAGTAACTTCATTGCTTCAGAAATTATCCGAAACGAGGACATCAGCGCAAGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | TCCTCATCATCAGCAGAACCGGCTTTGTTGCTGGATTaGATACGATCATTGTCCTTGATCAGGTTTGTAATA | + |
Preference number: 6 (lower is better) Translates to: SSSSAEPALLLD*IRSLSLIRFVI Trigger: TATTACAAACCTGATCAAGGACAATGATCGTATCCAATCCAGCAACAAAGCCGGTTCTGCTGATGATGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTGGAATTTTCTTCAAAGGCATTCATCATGAGCCCATaGCAGCGGATATTATCCACGCACTGGATGATGTCA | + |
Preference number: 6 (lower is better) Translates to: LEFSSKAFIMSP*QRILSTHWMMS Trigger: TGACATCATCCAGTGCGTGGATAATATCCGCTGCAATGGGCTCATGATGAATGCCTTTGAAGAAAATTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 90 bp | CTGAGGTTCTTAAATCTGCCATCTGATGACACAAGCTTTTGGAGCTaGTCAAGCAAAGATTTCGTCTGCTTAGAAACTTTGAGCCATGTC | + |
Preference number: 6 (lower is better) Translates to: LRFLNLPSDDTSFWS*SSKDFVCLETLSHV Trigger: GACATGGCTCAAAGTTTCTAAGCAGACGAAATCTTTGCTTGACAAGCTCCAAAAGCTTGTGTCATCAGATGGCAGATTTAAGAACCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | GGAGCGAAGACTCATACAGGCTTTCTTCGTCCAACATaGAAGATTCATCCAGTAAGTACTGAATTACCTTTG | + |
Preference number: 6 (lower is better) Translates to: GAKTHTGFLRPT*KIHPVSTELPL Trigger: CAAAGGTAATTCAGTACTTACTGGATGAATCTTTCATGTTGGACGAAGAAAGCCTGTATGAGTCTTCGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CCA 72 bp | AGGTTCTTAAATCTGCCATCTGATGACACAAGCTTTTaGAGCTTGTCAAGCAAAGATTTCGTCTGCTTAGAA | + |
Preference number: 6 (lower is better) Translates to: RFLNLPSDDTSF*SLSSKDFVCLE Trigger: TTCTAAGCAGACGAAATCTTTGCTTGACAAGCTCCAAAAGCTTGTGTCATCAGATGGCAGATTTAAGAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS TCA 72 bp | GGATCTGAAGCACTTTGCAAGAATTCATGGTTTTGCTaGAGCGAATGTCAACATCATCACAATATAAGGAAG | + |
Preference number: 6 (lower is better) Translates to: GSEALCKNSWFC*SECQHHHNIRK Trigger: CTTCCTTATATTGTGATGATGTTGACATTCGCTTCAGCAAAACCATGAATTCTTGCAAAGTGCTTCAGATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |
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CDS CAA 72 bp | TTAAATCTGCCATCTGATGACACAAGCTTTTGGAGCTaGTCAAGCAAAGATTTCGTCTGCTTAGAAACTTTG | + |
Preference number: 6 (lower is better) Translates to: LNLPSDDTSFWS*SSKDFVCLETL Trigger: CAAAGTTTCTAAGCAGACGAAATCTTTGCTTGACAAGCTCCAAAAGCTTGTGTCATCAGATGGCAGATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034912.6 |