Pregenerated sensors for RASGEF1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089809Ensembl transcript IDs: ENSMUST00000031276.15, ENSMUST00000146396.8, ENSMUST00000161148.2, ENSMUST00000161516.2, ENSMUST00000166484.2, ENSMUST00000168092.8, ENSMUST00000209346.2
Found 402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGATAAGGAGGCTCAGGAGACTGGAGGAAGAGGGGGAGCTTCGCTaGGATGGAAGGCAGGCAGTGGCTGAGGCCAGGGGTGCTCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: WIRRLRRLEEEGELR*DGRQAVAEARGAPY Trigger: GTAGGGAGCACCCCTGGCCTCAGCCACTGCCTGCCTTCCATCCCAGCGAAGCTCCCCCTCTTCCTCCAGTCTCCTGAGCCTCCTTATCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CCA 90 bp | GACTGGAGGAAGAGGGGGAGCTTCGCTGGGATGGAAGGCAGGCAGTaGCTGAGGCCAGGGGTGCTCCCTACAATGTTTGTCATGCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: DWRKRGSFAGMEGRQ*LRPGVLPTMFVMLN Trigger: GTTGAGCATGACAAACATTGTAGGGAGCACCCCTGGCCTCAGCCACTGCCTGCCTTCCATCCCAGCGAAGCTCCCCCTCTTCCTCCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CCA 90 bp | ACAGGCGGCTTCCTCATCGGGGATTTCACACTGCAGACAACTCCCTaGGTAGGATGCACAGCTCGGGCAAGGTTACCCAGAGTTGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: TGGFLIGDFTLQTTP*VGCTARARLPRVGR Trigger: CCGCCCAACTCTGGGTAACCTTGCCCGAGCTGTGCATCCTACCCAGGGAGTTGTCTGCAGTGTGAAATCCCCGATGAGGAAGCCGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CCA 90 bp | CCACTAAGGAAGCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTaGTGGTTGAGGGGCCATCCAGGTCTAGGTATCAGTCATTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: PLRKRWSRVAWDSFL*WLRGHPGLGISHSP Trigger: GGGGGAATGACTGATACCTAGACCTGGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGCTTCCTTAGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CCA 90 bp | CTAAGGAAGCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTaGTTGAGGGGCCATCCAGGTCTAGGTATCAGTCATTCCCCCACA | + |
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Preference number: 1 (lower is better) Translates to: LRKRWSRVAWDSFLW*LRGHPGLGISHSPT Trigger: TGTGGGGGAATGACTGATACCTAGACCTGGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGCTTCCTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR TCA 90 bp | GGAGGAAGAGGGGGAGCTTCGCTGGGATGGAAGGCAGGCAGTGGCTaGGGCCAGGGGTGCTCCCTACAATGTTTGTCATGCTCAACATTT | + |
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Preference number: 1 (lower is better) Translates to: GGRGGASLGWKAGSG*GQGCSLQCLSCSTF Trigger: AAATGTTGAGCATGACAAACATTGTAGGGAGCACCCCTGGCCTCAGCCACTGCCTGCCTTCCATCCCAGCGAAGCTCCCCCTCTTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR TCA 90 bp | AAGCCTGGCTTGTTCCCTGCCACGCCTGCTCAATGTCAGGACTGCTaGCCAAACAGGCGGCTTCCTCATCGGGGATTTCACACTGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: KPGLFPATPAQCQDC*PNRRLPHRGFHTAD Trigger: GTCTGCAGTGTGAAATCCCCGATGAGGAAGCCGCCTGTTTGGTCAGCAGTCCTGACATTGAGCAGGCGTGGCAGGGAACAAGCCAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR GCA 90 bp | GAGCAAACACTGTCTCAGGAAGCCTGGCTTGTTCCCTGCCACGCCTaGTCAATGTCAGGACTGCTGACCAAACAGGCGGCTTCCTCATCG | + |
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Preference number: 1 (lower is better) Translates to: EQTLSQEAWLVPCHA*SMSGLLTKQAASSS Trigger: CGATGAGGAAGCCGCCTGTTTGGTCAGCAGTCCTGACATTGAGCAGGCGTGGCAGGGAACAAGCCAGGCTTCCTGAGACAGTGTTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR GCA 90 bp | GCACCCAGAAGGAATGCGGGCTCAGGACTTGGCACAGTGCTAGAGTaGTTGCCTAGCATGCGTGGAGCCCTTGATTCCTCTGTCAGCATT | + |
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Preference number: 1 (lower is better) Translates to: APRRNAGSGLGTVLE*LPSMRGALDSSVSI Trigger: AATGCTGACAGAGGAATCAAGGGCTCCACGCATGCTAGGCAAGCACTCTAGCACTGTGCCAAGTCCTGAGCCCGCATTCCTTCTGGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR GCA 90 bp | CTATCGAGCACAACTCTAGGAAGCCTTCACTCTTCCCGTCGCTCCTaGCCCTGGATGGGTCTGATTTCAAGTCCAGAACAGCAGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LSSTTLGSLHSSRRS*PWMGLISSPEQQQA Trigger: TGCCTGCTGCTGTTCTGGACTTGAAATCAGACCCATCCAGGGGCAGGAGCGACGGGAAGAGTGAAGGCTTCCTAGAGTTGTGCTCGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CCA 90 bp | AGCACAACTCTAGGAAGCCTTCACTCTTCCCGTCGCTCCTGCCCCTaGATGGGTCTGATTTCAAGTCCAGAACAGCAGCAGGCAGACACA | + |
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Preference number: 1 (lower is better) Translates to: STTLGSLHSSRRSCP*MGLISSPEQQQADT Trigger: TGTGTCTGCCTGCTGCTGTTCTGGACTTGAAATCAGACCCATCCAGGGGCAGGAGCGACGGGAAGAGTGAAGGCTTCCTAGAGTTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CCA 90 bp | CTCCCACACCACAGGCAGAGTGGTGGTTTAGTGAGAGTCTATGACTaGAAGGGGCAGCAGCTGGGTGAAGCAACGAGTGCTGGAATGGTT | + |
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Preference number: 1 (lower is better) Translates to: LPHHRQSGGLVRVYD*KGQQLGEATSAGMV Trigger: AACCATTCCAGCACTCGTTGCTTCACCCAGCTGCTGCCCCTTCCAGTCATAGACTCTCACTAAACCACCACTCTGCCTGTGGTGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR TCA 90 bp | CACCAGGAAGGTGCAGGAGGGAGAGACGTAAGTGTGAGGAGAGAGTaGCCCCGGGAGGGTCCAGGGCAGCAAAGATACAATATGGATTTA | + |
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Preference number: 1 (lower is better) Translates to: HQEGAGGRDVSVRRE*PREGPGQQRYNMDL Trigger: TAAATCCATATTGTATCTTTGCTGCCCTGGACCCTCCCGGGGTCACTCTCTCCTCACACTTACGTCTCTCCCTCCTGCACCTTCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR CCA 90 bp | TCTCGGTGCACCTTGGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTTaGAACCATTGGGGACGCTTCCAGTGGTTGATTGGCCTTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: SRCTLALLSCSLEAL*NHWGRFQWLIGLVF Trigger: AAAGACAAGGCCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR CCA 90 bp | ATCTCTCCAGAGATCTCCTGGGCAGGAAGGAAATGGCTGAAGCCCTaGGGGAAGCCAGAGGAGGAATTTATGCTCTGGACAAAGATTCCC | + |
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Preference number: 1 (lower is better) Translates to: ISPEISWAGRKWLKP*GKPEEEFMLWTKIP Trigger: GGGAATCTTTGTCCAGAGCATAAATTCCTCCTCTGGCTTCCCCCAGGGCTTCAGCCATTTCCTTCCTGCCCAGGAGATCTCTGGAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR CCA 90 bp | TGGAACAGTGAACCTGAAGGAATAAGAATCTCTCCAGAGATCTCCTaGGCAGGAAGGAAATGGCTGAAGCCCTGGGGGAAGCCAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: WNSEPEGIRISPEIS*AGRKWLKPWGKPEE Trigger: CTCCTCTGGCTTCCCCCAGGGCTTCAGCCATTTCCTTCCTGCCCAGGAGATCTCTGGAGAGATTCTTATTCCTTCAGGTTCACTGTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR TCA 90 bp | GCCCAGTCCACGGACGCCTTCTGTCTCCATTTAAGATGCATCTTCTaGCATCCATTAAGCCAGTCTAGAAAATCCCTCACGGCTGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: AQSTDAFCLHLRCIF*HPLSQSRKSLTAVP Trigger: GGGCACAGCCGTGAGGGATTTTCTAGACTGGCTTAATGGATGTCAGAAGATGCATCTTAAATGGAGACAGAAGGCGTCCGTGGACTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR GCA 90 bp | ACTCTGGAATCTGAGCATAATTTAGGAACTCGGAAGACACCACTCTaGCATTTCCACGGGCAGCGTCTTCAGGGGCAAGGCACTGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: TLESEHNLGTRKTPL*HFHGQRLQGQGTVR Trigger: CCTAACAGTGCCTTGCCCCTGAAGACGCTGCCCGTGGAAATGGCAGAGTGGTGTCTTCCGAGTTCCTAAATTATGCTCAGATTCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR TCA 90 bp | TCAAGCGAGACCTCTTTGAGGTGCATCAACTTCAGACCTCATCCTTaGAGATGGGTCAAGCTCCCACACCACAGGCAGAGTGGTGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: SSETSLRCINFRPHP*RWVKLPHHRQSGGL Trigger: TAAACCACCACTCTGCCTGTGGTGTGGGAGCTTGACCCATCTTCAAGGATGAGGTCTGAAGTTGATGCACCTCAAAGAGGTCTCGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR TCA 90 bp | GTTATTTCGGCTCCAGAAATCACAAGGGAACCTGCATGTCTGCGCTaGGCGTCCCTGCCCCCAGTTGGCTCTGATTGGAAAATAAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: VISAPEITREPACLR*ASLPPVGSDWKIKL Trigger: CAACTTTATTTTCCAATCAGAGCCAACTGGGGGCAGGGACGCTCAGCGCAGACATGCAGGTTCCCTTGTGATTTCTGGAGCCGAAATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR TCA 90 bp | CGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTaGCGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: RRAGAFRRFSLKCLQ*RFQSQKRSKSICQL Trigger: CAGCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR TCA 90 bp | TCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGAAGATaGATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SIQVQSCDSHGNSRR*IMRRAGAFRRFSLK Trigger: CTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR TCA 90 bp | AAGATTCCCAAGCTGTCAGATGTTCTTGAAGGTCAGACTTGGAGCTaGGACCCTGGTGGGCAGGGGCCACACCTTGATGGACTAATTATA | + |
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Preference number: 1 (lower is better) Translates to: KIPKLSDVLEGQTWS*DPGGQGPHLDGLII Trigger: TATAATTAGTCCATCAAGGTGTGGCCCCTGCCCACCAGGGTCTCAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGCTTGGGAATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR TCA 90 bp | TTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCTGTGGGAAATaGATTTCCCGTCTGATCTACAGCTGGGCTTGCTTGCAGGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: FSLKRDPSPSVSCGK*ISRLIYSWACLQGL Trigger: CAGACCCTGCAAGCAAGCCCAGCTGTAGATCAGACGGGAAATTCATTTCCCACAGCTGACAGATGGACTTGGATCTCTTTTGAGACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR CCA 90 bp | AAATGGCTGAAGCCCTGGGGGAAGCCAGAGGAGGAATTTATGCTCTaGACAAAGATTCCCAAGCTGTCAGATGTTCTTGAAGGTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: KWLKPWGKPEEEFML*TKIPKLSDVLEGQT Trigger: AGTCTGACCTTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGCATAAATTCCTCCTCTGGCTTCCCCCAGGGCTTCAGCCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR TCA 90 bp | TCTGGTGACAATATAGTGACTGTGAAGGGACACAAAGGCACAGTTTaGGGACATCTGTTGCCTGAAGCATTTGACGGCGGATGGATAGGA | + |
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Preference number: 1 (lower is better) Translates to: SGDNIVTVKGHKGTV*GHLLPEAFDGGWIG Trigger: TCCTATCCATCCGCCGTCAAATGCTTCAGGCAACAGATGTCCTCAAACTGTGCCTTTGTGTCCCTTCACAGTCACTATATTGTCACCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR CCA 90 bp | CTGTGGCAAAAAGCCCAGGATGTATCTCCTAGACTAGATCTAAAGTaGGTGACATTGGACAATTCACAGGCTTACTCTGAGTCCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LWQKAQDVSPRLDLK*VTLDNSQAYSESWL Trigger: AAGCCAGGACTCAGAGTAAGCCTGTGAATTGTCCAATGTCACCCACTTTAGATCTAGTCTAGGAGATACATCCTGGGCTTTTTGCCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR TCA 90 bp | CAAAGTGGCTTACGTAACAAATGTTTTAAAGCAGAGAACTGTGTGTaGACATCACGCCCGGGATGTGGTGACGGTAAGTGTACCATTGTC | + |
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Preference number: 1 (lower is better) Translates to: QSGLRNKCFKAENCV*TSRPGCGDGKCTIV Trigger: GACAATGGTACACTTACCGTCACCACATCCCGGGCGTGATGTTCACACACAGTTCTCTGCTTTAAAACATTTGTTACGTAAGCCACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR TCA 90 bp | CCTGTACTGACAGGCTGGATATTGTCCAGGGACAATATCTGGAGATaGTATTGGAATGGAATGTTGGAGACAGATGAAACCTCAACAGTG | + |
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Preference number: 1 (lower is better) Translates to: PVLTGWILSRDNIWR*YWNGMLETDETSTV Trigger: CACTGTTGAGGTTTCATCTGTCTCCAACATTCCATTCCAATATCATCTCCAGATATTGTCCCTGGACAATATCCAGCCTGTCAGTACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR GCA 90 bp | GCCCCTCTTCCAGTTCCTCCAGTTAAGCCATTTGGAGACTTGCTTTaGCCAGATTTTCTATTTAGCCTTTCATTTCATTCGATCAACTCA | + |
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Preference number: 1 (lower is better) Translates to: APLPVPPVKPFGDLL*PDFLFSLSFHSINS Trigger: TGAGTTGATCGAATGAAATGAAAGGCTAAATAGAAAATCTGGGCAAAGCAAGTCTCCAAATGGCTTAACTGGAGGAACTGGAAGAGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR GCA 90 bp | ATACCCTACAACGTAGACTCTAAAGGTGTCATGGATTGGTTCCAATaGTATTTGTGTTATTTCGGCTCCAGAAATCACAAGGGAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: IPYNVDSKGVMDWFQ*YLCYFGSRNHKGTC Trigger: GCAGGTTCCCTTGTGATTTCTGGAGCCGAAATAACACAAATAGCATTGGAACCAATCCATGACACCTTTAGAGTCTACGTTGTAGGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR TCA 90 bp | TCAGTTCTCAGCATTCATCACTGTAATTCCCATCGAAGGCATAACTaGAGCAGTTCAAAGTTACACACACACACACACACACACACTGTT | + |
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Preference number: 1 (lower is better) Translates to: SVLSIHHCNSHRRHN*SSSKLHTHTHTHTV Trigger: AACAGTGTGTGTGTGTGTGTGTGTGTGTAACTTTGAACTGCTTCAGTTATGCCTTCGATGGGAATTACAGTGATGAATGCTGAGAACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR GCA 90 bp | AGTGAATTCGCTAGGGTAGTTTCCAACAACTGTATTAAGCCCAGATaGCAGGGCTATGATAAAGAGAGAAGAAAAATTGTCCAGTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SEFARVVSNNCIKPR*QGYDKERRKIVQWD Trigger: ATCCCACTGGACAATTTTTCTTCTCTCTTTATCATAGCCCTGGCATCTGGGCTTAATACAGTTGTTGGAAACTACCCTAGCGAATTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR GCA 90 bp | CAGGGGATCACTACTCTAAAGTTTCTCCTAGAGTATCGTAATGGCTaGCTGCAGAACAACTACAGACCTAATTTAGATGTTAAAGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: QGITTLKFLLEYRNG*LQNNYRPNLDVKVD Trigger: ATCAACTTTAACATCTAAATTAGGTCTGTAGTTGTTCTGCAGGCAGCCATTACGATACTCTAGGAGAAACTTTAGAGTAGTGATCCCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGCCCTCCAGGGTCCTCTaGTGCAGCAGTGGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EFASQQPTQSLGGRGGRGPSRVL*CSSGSS Trigger: GCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGG...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGATCTACAGCTGGGCTTaGTTGCAGGGTCTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EFASQQPTQSLGGRGGRGIYSWA*LQGLGG Trigger: GCCTCCCAGACCCTGCAAGCAAGCCCAGCTGTAGAT...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGAAGCCTTCACTCTTCCCGTCGCTCCTGCCCCTGGATGGGTCTGATTTCAATGGAAGGCAGGCAGTaGCTGAGGCCAGGGGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LGSLHSSRRSCPWMGLISMEGRQ*LRPGVL Trigger: GAGCACCCCTGGCCTCAGCCACTGCCTGCCTTCCAT...TGAAATCAGACCCATCCAGGGGCAGGAGCGACGGGAAGAGTGAAGGCTTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTCCCTCCAGGGTCCTCTaGTGCAGCAGTGGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: AQSRGFQKILPQVSSVTIPSRVL*CSSGSS Trigger: GCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGG...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCACTCCTTTCACTGAACTaGAGTCAGCAGAGGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: EALVPSRLGQLPLVVEGPLLSLN*SQQRGS Trigger: ACTTCCCCTCTGCTGACTTCAGTTCAGTGAAAGGAG...TGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGATTGGGTCATCCTACGGAGAAGGCCCACGTGCCTCACTGCATCTGCGGACCACACCAGGAAGGTaGAGGAGGGAGAGACGTAAG | + |
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Preference number: 2 (lower is better) Translates to: QQIGSSYGEGPRASLHLRTTPGR*RRERRK Trigger: CTTACGTCTCTCCCTCCTGCACCTTCCTGGTGTGGT...CCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGCGTCTGATCTACAGCTaGGCTTGCTTGCAGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: EFASQQPTQSLGGRGGRGRLIYS*ACLQGL Trigger: CAGACCCTGCAAGCAAGCCCAGCTGTAGATCAGACG...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCATCCAACCCGTCCAATACTTaGAGAGACAGAGAACAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ALVPSRLGQLPLVVEGPSNPSNT*RDREQD Trigger: GTCTTGTTCTCTGTCTCTCCAAGTATTGGACGGGTT...GGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCATCCTTTATGTTTTGGCAGTaGGAAAAGCATGCTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: ALVPSRLGQLPLVVEGPSFMFWQ*EKHAGL Trigger: GAGTCCAGCATGCTTTTCTCACTGCCAAAACATAAA...GGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CAA 90 bp | CCCAGAAGGAATGCGGGCTCAGGACTTGGCACAGTGCTAGAGTGCTaGCCTAGCATGCGTGGAGCCCTTGATTCCTCTGTCAGCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: PRRNAGSGLGTVLEC*PSMRGALDSSVSIR Trigger: TCTAATGCTGACAGAGGAATCAAGGGCTCCACGCATGCTAGGCAAGCACTCTAGCACTGTGCCAAGTCCTGAGCCCGCATTCCTTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGGTCAGCTGTGGGAAATaGATTTCCCGTCTGATCTAC | + |
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Preference number: 2 (lower is better) Translates to: EFASQQPTQSLGGRGGRGVSCGK*ISRLIY Trigger: GTAGATCAGACGGGAAATTCATTTCCCACAGCTGAC...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAGATTGGGTCATCCTACGGAGAAGGCCCACGTGCCTCACTGCATCTGCGGAACAGTATCTGGGAATaGAGGGAGACAGCAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QQIGSSYGEGPRASLHLRNSIWE*RETAKA Trigger: GGCTTTTGCTGTCTCCCTTCATTCCCAGATACTGTT...CCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAGATTGGGTCATCCTACGGAGAAGGCCCACGTGCCTCACTGCATCTGCGGGATCTTCCCCCAAAGTaGCTTCTCAAAGTTCACTCG | + |
|
Preference number: 2 (lower is better) Translates to: QQIGSSYGEGPRASLHLRDLPPK*LLKVHS Trigger: CGAGTGAACTTTGAGAAGTCACTTTGGGGGAAGATC...CCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CAA 90 bp | GTCTCGGTGCACCTTGGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTaGGAACCATTGGGGACGCTTCCAGTGGTTGATTGGCCTTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VSVHLGLAFLLFGGS*EPLGTLPVVDWPCL Trigger: AAGACAAGGCCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCACTACAATGTTTGTCATaGTCAACATTTTGCCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EALVPSRLGQLPLVVEGPLQCLS*STFCQG Trigger: CCCTTGGCAAAATGTTGAGCATGACAAACATTGTAG...TGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR CCA 90 bp | ACCATCACTCTCCTCCCCTTCAGCTGTAGCCTGAAGCTAAGAGGCAGGGTTCTGTGTCTCGGTGCACCTTaGCCTTGCTTTCCTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TITLLPFSCSLKLRGRVLCLGAP*PCFPAL Trigger: AAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACA...CAGAACCCTGCCTCTTAGCTTCAGGCTACAGCTGAAGGGGAGGAGAGTGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCGGCTCCAGAAATCACAAGGGAACCTGCATGTCTGCGCTGAGCGTCCCAGCTTACACCTCTTCTaGCTTAGTTTGGGGCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LFRLQKSQGNLHVCAERPSLHLF*LSLGPQ Trigger: CTGGGGCCCCAAACTAAGTCAGAAGAGGTGTAAGCT...GGGACGCTCAGCGCAGACATGCAGGTTCCCTTGTGATTTCTGGAGCCGAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATCACTCTCCTCCCCTTCAGCTGTAGCCTGAAGCTAAGAGGCAGGGTTCTGTTGGCCTTGCTTTCCTaGTCTTTGGAGGCTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TITLLPFSCSLKLRGRVLLALLS*SLEALW Trigger: CCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAA...CAGAACCCTGCCTCTTAGCTTCAGGCTACAGCTGAAGGGGAGGAGAGTGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGATGAATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGCGTCTGATCTACAGCTaGGCTTGCTTGCAGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QKMNHAQSRGFQKILPQVRLIYS*ACLQGL Trigger: CAGACCCTGCAAGCAAGCCCAGCTGTAGATCAGACG...CACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGAATCTTTGCCCTCACTaGAATACTGTTCAAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EFASQQPTQSLGGRGGRGNLCPH*NTVQAE Trigger: CTCAGCTTGAACAGTATTCCAGTGAGGGCAAAGATT...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR CCA 90 bp | GATTCATGTTACATCAGTACCAACAGCTCACACCCAATGTCTTCCCTTGGCTCCGGAGGCTCAGGAGACTaGAGGAAGAGGGGGAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: DSCYISTNSSHPMSSLGSGGSGD*RKRGSF Trigger: GAAGCTCCCCCTCTTCCTCCAGTCTCCTGAGCCTCC...GGAGCCAAGGGAAGACATTGGGTGTGAGCTGTTGGTACTGATGTAACATGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 90 bp | GGAGAAAGTCGAACCCTTGGGAAGTTTCTTCTGTCTCGGTGCACCTaGGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTTGGAACCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: GESRTLGKFLLSRCT*ALLSCSLEALWNHW Trigger: CCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAGAAGAAACTTCCCAAGGGTTCGACTTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 90 bp | AGGAATTTATGCTCTGGACAAAGATTCCCAAGCTGTCAGATGTTCTaGAAGGTCAGACTTGGAGCTGAGACCCTGGTGGGCAGGGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RNLCSGQRFPSCQMF*KVRLGAETLVGRGH Trigger: GTGGCCCCTGCCCACCAGGGTCTCAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGCATAAATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR GCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGTCCCTAGTACTGGATaGCAGAAAACAAAGGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDVPSTG*QKTKAS Trigger: GCTGGCCTTTGTTTTCTGGCATCCAGTACTAGGGAC...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTGGTGCACCTTGGCCTTaGTTTCCTGCTCTTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLACLCSPISNSGIVCVCGAPWP*FPALWR Trigger: CCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACC...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATCACTCTCCTCCCCTTCAGCTGTAGCCTGAAGCTAAGAGGCAGGGTTCTGGAAGGGAACAGGGTTTaGTCTCTTAGGCTATGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: TITLLPFSCSLKLRGRVLEGNRV*SLRLWS Trigger: AGACCATAGCCTAAGAGACCAAACCCTGTTCCCTTC...CAGAACCCTGCCTCTTAGCTTCAGGCTACAGCTGAAGGGGAGGAGAGTGATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAAAGACAGACAGGCTGTAACAAAGCAGGTGCACCATGCTCCCCGTGTGAACCCACCTTTTTGAAGTaGGTTGCCCCTCTTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SQRQTGCNKAGAPCSPCEPTFLK*VAPLPV Trigger: AACTGGAAGAGGGGCAACCCACTTCAAAAAGGTGGG...TTCACACGGGGAGCATGGTGCACCTGCTTTGTTACAGCCTGTCTGTCTTTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGACACACACACACAGAGAGATCATGTCATTGAACCCAGAATGGCCGTACAAGGTTACCCAGAGTTaGGCGGGGAGAGAGACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PKTHTHREIMSLNPEWPYKVTQS*AGRETC Trigger: GCAGGTCTCTCTCCCCGCCCAACTCTGGGTAACCTT...GTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGTGTGTGTGTCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 90 bp | AAGTTTCTTCTGTCTCGGTGCACCTTGGCCTTGCTTTCCTGCTCTTaGGAGGCTCTTTGGAACCATTGGGGACGCTTCCAGTGGTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: KFLLSRCTLALLSCS*EALWNHWGRFQWLI Trigger: AATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAGAAGAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR CAA 90 bp | GATTCTTCACTTCCTTTCTTGAGGCTGAACCTAGAGCTTCCTGATTaGGCTAAGCTGACAGGCCAGCAAGCCCCCAGGTTTAGCCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: DSSLPFLRLNLELPD*AKLTGQQAPRFSLS Trigger: AGACAGGCTAAACCTGGGGGCTTGCTGGCCTGTCAGCTTAGCCAAATCAGGAAGCTCTAGGTTCAGCCTCAAGAAAGGAAGTGAAGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR CAA 90 bp | ACACAGAGAGATCATGTCATTGAACCCAGAATGGCCGTACTGGGCTaGATTCCCTGCCAGTTGGTCAAGCGAGACCTCTTTGAGGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TQRDHVIEPRMAVLG*IPCQLVKRDLFEVH Trigger: ATGCACCTCAAAGAGGTCTCGCTTGACCAACTGGCAGGGAATCAAGCCCAGTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTGTCAGCTGTGGGAAATaGATTTCCCGTCTGATCTAC | + |
|
Preference number: 2 (lower is better) Translates to: AQSRGFQKILPQVSSVTIVSCGK*ISRLIY Trigger: GTAGATCAGACGGGAAATTCATTTCCCACAGCTGAC...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATGTTACATCAGTACCAACAGCTCACACCCAATGTCTTCCCTTGGCTCCTGCTGGGCTTGATTCCCTaGCAGTTGGTCAAGCGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FMLHQYQQLTPNVFPWLLLGLIP*QLVKRD Trigger: GTCTCGCTTGACCAACTGGCAGGGAATCAAGCCCAG...CAGGAGCCAAGGGAAGACATTGGGTGTGAGCTGTTGGTACTGATGTAACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAATCTACCTGCTAGCTACACATAGTAGATGTGGAAGCCAAAGACACACAGAGGGGGAGCTTCGCTaGGATGGAAGGCAGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TEIYLLATHSRCGSQRHTEGELR*DGRQAV Trigger: CACTGCCTGCCTTCCATCCCAGCGAAGCTCCCCCTC...TGTGTGTCTTTGGCTTCCACATCTACTATGTGTAGCTAGCAGGTAGATTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTGCTGTCAGATGTTCTTaGAGGTCAGACTTGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GLACLCSPISNSGIVCVCAVRCS*RSDLEL Trigger: CAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGC...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTCAAATACCCAGGGGATaGGTGGGAAGAAATAGATCG | + |
|
Preference number: 2 (lower is better) Translates to: PRFSLSLLSNLQFGDSVCQIPRG*VGRNRS Trigger: CGATCTATTTCTTCCCACTCATCCCCTGGGTATTTG...ACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGTCATCCTACGGAGAAGGCCCACGTGCCTCACTGCATCTGCGGAGAGTAAAAATTTACCCAAATaGAAAGGACAGCACACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DWVILRRRPTCLTASAESKNLPK*KGQHTG Trigger: TCCTGTGTGCTGTCCTTTCCATTTGGGTAAATTTTT...ACTCTCCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGTCATCCTACGGAGAAGGCCCACGTGCCTCACTGCATCTGCGGAGAGTAGACTAGATCTAAAGTaGGTGACATTGGACAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: DWVILRRRPTCLTASAESRLDLK*VTLDNS Trigger: TGAATTGTCCAATGTCACCCACTTTAGATCTAGTCT...ACTCTCCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGAAAGTCGAACCCTTGGGAAGTTTCTTCTGTCTCGGTGCACCTTGGCCTTTAAGATCCCTGCCCTaGTTTATGTTTCGTCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LEKVEPLGSFFCLGAPWPLRSLP*FMFRQC Trigger: ACACTGACGAAACATAAATCAGGGCAGGGATCTTAA...AGGCCAAGGTGCACCGAGACAGAAGAAACTTCCCAAGGGTTCGACTTTCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATGTTACATCAGTACCAACAGCTCACACCCAATGTCTTCCCTTGGCTCCTGCAAGCGAGACCTCTTTaGGGTGCATCAACTTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FMLHQYQQLTPNVFPWLLQARPL*GASTSD Trigger: GTCTGAAGTTGATGCACCTCAAAGAGGTCTCGCTTG...CAGGAGCCAAGGGAAGACATTGGGTGTGAGCTGTTGGTACTGATGTAACATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR CAA 90 bp | GGAACTTGCACAAAATCTAGAACCAGTGGAGGTCAGAGCTTCGATTaGAACCTATCGAGCACAACTCTAGGAAGCCTTCACTCTTCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: GTCTKSRTSGGQSFD*NLSSTTLGSLHSSR Trigger: ACGGGAAGAGTGAAGGCTTCCTAGAGTTGTGCTCGATAGGTTCAAATCGAAGCTCTGACCTCCACTGGTTCTAGATTTTGTGCAAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAATCTACCTGCTAGCTACACATAGTAGATGTGGAAGCCAAAGACACACAGCAGAGAACTGTGTGTaGACATCACGCCCGGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: TEIYLLATHSRCGSQRHTAENCV*TSRPGC Trigger: ACATCCCGGGCGTGATGTTCACACACAGTTCTCTGC...TGTGTGTCTTTGGCTTCCACATCTACTATGTGTAGCTAGCAGGTAGATTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGACACACACACACAGAGAGATCATGTCATTGAACCCAGAATGGCCGTACAGTACAGACCCTCACTaGACACTGAGCAAACACTGT | + |
|
Preference number: 2 (lower is better) Translates to: PKTHTHREIMSLNPEWPYSTDPH*TLSKHC Trigger: ACAGTGTTTGCTCAGTGTTCAGTGAGGGTCTGTACT...GTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGTGTGTGTGTCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCGGCTCCAGAAATCACAAGGGAACCTGCATGTCTGCGCTGAGCGTCCCTTAAGATGCATCTTCTaGCATCCATTAAGCCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LFRLQKSQGNLHVCAERPLRCIF*HPLSQS Trigger: AGACTGGCTTAATGGATGTCAGAAGATGCATCTTAA...GGGACGCTCAGCGCAGACATGCAGGTTCCCTTGTGATTTCTGGAGCCGAAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTAGATTATTGTCTCCTTaGCTGTGCAGACTCCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLACLCSPISNSGIVCVCRLLSP*LCRLLA Trigger: AGCAAGGAGTCTGCACAGGCAAGGAGACAATAATCT...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTTGCTTTCCTGCTCTTTaGAGGCTCTTTGGAACCATT | + |
|
Preference number: 2 (lower is better) Translates to: GLACLCSPISNSGIVCVCCFPAL*RLFGTI Trigger: AATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCA...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| 3UTR-3UTR TCA 90 bp | ACGTCAGAATCCCTGAAGATGACATCGGCAGTGTTACTGAGTTTCTTCTTCCCTCACAAAGGCACAGTTTaGGGACATCTGTTGCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TSESLKMTSAVLLSFFFPHKGTV*GHLLPE Trigger: TTCAGGCAACAGATGTCCTCAAACTGTGCCTTTGTG...AGGGAAGAAGAAACTCAGTAACACTGCCGATGTCATCTTCAGGGATTCTGACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTTCCAATGCTATTTGTGTTATTTCGGCTCCAGAAATCACAAGGGAACCTGAGTTCACTCGGCCTTTaGACATCTCTGAGAGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LVPMLFVLFRLQKSQGNLSSLGL*TSLRVG Trigger: GCCCACTCTCAGAGATGTTCAAAGGCCGAGTGAACT...CAGGTTCCCTTGTGATTTCTGGAGCCGAAATAACACAAATAGCATTGGAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTTCCAAACTTGGTGGGTaGGAGGGGTTTCCCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: DVKVDQNYQQPGLHLVTASKLGG*EGFPLP Trigger: AGGGAGGGGAAACCCCTCCCACCCACCAAGTTTGGA...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTATAAACTCAGTGCTGTaGACCTGTATGCTGACATAT | + |
|
Preference number: 2 (lower is better) Translates to: PRFSLSLLSNLQFGDSVCINSVL*TCMLTY Trigger: ATATGTCAGCATACAGGTCCACAGCACTGAGTTTAT...ACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 90 bp | AAAGCCCAGGATGTATCTCCTAGACTAGATCTAAAGTGGGTGACATaGGACAATTCACAGGCTTACTCTGAGTCCTGGCTTTCTTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: KAQDVSPRLDLKWVT*DNSQAYSESWLSWS Trigger: TGACCAAGAAAGCCAGGACTCAGAGTAAGCCTGTGAATTGTCCAATGTCACCCACTTTAGATCTAGTCTAGGAGATACATCCTGGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAAATCTACCTGCTAGCTACACATAGTAGATGTGGAAGCCAAAGACACACATTTAGTGAGAGTCTATaGCTGGAAGGGGCAGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TEIYLLATHSRCGSQRHTFSESL*LEGAAA Trigger: AGCTGCTGCCCCTTCCAGTCATAGACTCTCACTAAA...TGTGTGTCTTTGGCTTCCACATCTACTATGTGTAGCTAGCAGGTAGATTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTCTATTGAACTATGTGTaGCATCTGCTATGTAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLACLCSPISNSGIVCVCLLNYV*HLLCNR Trigger: CCTGTTACATAGCAGATGCCACACATAGTTCAATAG...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCAGAATCCCTGAAGATGACATCGGCAGTGTTACTGAGTTTCTTCTTCCCTAGAAAGTCGAACCCTTaGGAAGTTTCTTCTGTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: TSESLKMTSAVLLSFFFPRKSNP*EVSSVS Trigger: CGAGACAGAAGAAACTTCCCAAGGGTTCGACTTTCT...AGGGAAGAAGAAACTCAGTAACACTGCCGATGTCATCTTCAGGGATTCTGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCAGAATCCCTGAAGATGACATCGGCAGTGTTACTGAGTTTCTTCTTCCCTTACAATCTGGCTCATTaGGGCACAGGCTATAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: TSESLKMTSAVLLSFFFPYNLAH*GTGYNP Trigger: TGGATTATAGCCTGTGCCCCAATGAGCCAGATTGTA...AGGGAAGAAGAAACTCAGTAACACTGCCGATGTCATCTTCAGGGATTCTGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 90 bp | TGGGTTGCCCCTCTTCCAGTTCCTCCAGTTAAGCCATTTGGAGACTaGCTTTGCCCAGATTTTCTATTTAGCCTTTCATTTCATTCGATC | + |
|
Preference number: 2 (lower is better) Translates to: WVAPLPVPPVKPFGD*LCPDFLFSLSFHSI Trigger: GATCGAATGAAATGAAAGGCTAAATAGAAAATCTGGGCAAAGCAAGTCTCCAAATGGCTTAACTGGAGGAACTGGAAGAGGGGCAACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 90 bp | GATGAAACCTCAACAGTGAATTTTAATGGAAGAAAATCTCAGACATaGAAGCAGCATACAGGTGTCGGGACAGGGACGGGAATGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DETSTVNFNGRKSQT*KQHTGVGTGTGMEA Trigger: TGCTTCCATTCCCGTCCCTGTCCCGACACCTGTATGCTGCTTCAATGTCTGAGATTTTCTTCCATTAAAATTCACTGTTGAGGTTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGATTCTTCACTTCCTTTCTTGAGGCTGAACCTAGAGCTTCCTGATTTGGCTCATCGGCAGTGTTACTaGGTTTCTTCTTCCCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IDSSLPFLRLNLELPDLAHRQCY*VSSSLF Trigger: GAAGAGGGAAGAAGAAACTCAGTAACACTGCCGATG...AGCCAAATCAGGAAGCTCTAGGTTCAGCCTCAAGAAAGGAAGTGAAGAATCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTCCAGAAGATGAATCATaGGCAGAGCCGGGGCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: DVKVDQNYQQPGLHLVTAPEDES*AEPGLS Trigger: TGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTGG...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTGATTCTTCACTTCCTTTCTTGAGGCTGAACCTAGAGCTTCCTGATTTGGCTGATAGGAAAGACAGTTaGCACCAGCAGCTAGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: IDSSLPFLRLNLELPDLADRKDS*HQQLES Trigger: TGACTCTAGCTGCTGGTGGCAACTGTCTTTCCTATC...AGCCAAATCAGGAAGCTCTAGGTTCAGCCTCAAGAAAGGAAGTGAAGAATCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCATGTTACATCAGTACCAACAGCTCACACCCAATGTCTTCCCTTGGCTCCTGTCATGCTCAACATTTTaGCAAGGGCAAATTTCACTA | + |
|
Preference number: 2 (lower is better) Translates to: FMLHQYQQLTPNVFPWLLSCSTF*QGQISL Trigger: TAGTGAAATTTGCCCTTGGCAAAATGTTGAGCATGA...CAGGAGCCAAGGGAAGACATTGGGTGTGAGCTGTTGGTACTGATGTAACATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 90 bp | TACAACGTAGACTCTAAAGGTGTCATGGATTGGTTCCAATGCTATTaGTGTTATTTCGGCTCCAGAAATCACAAGGGAACCTGCATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: YNVDSKGVMDWFQCY*CYFGSRNHKGTCMS Trigger: AGACATGCAGGTTCCCTTGTGATTTCTGGAGCCGAAATAACACAAATAGCATTGGAACCAATCCATGACACCTTTAGAGTCTACGTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGCTATTGGAACAGTGAACCTGAAGGAATAAGAATCTCTCCAGAGATCTCCTCAATGTGGCCATATTaGATATATCTCCTGTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SGYWNSEPEGIRISPEISSMWPY*IYLLLL Trigger: CAGCAACAGGAGATATATTCAATATGGCCACATTGA...GGAGATCTCTGGAGAGATTCTTATTCCTTCAGGTTCACTGTTCCAATAGCCTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGATTCTTCACTTCCTTTCTTGAGGCTGAACCTAGAGCTTCCTGATTTGGCTTTGCTGAGAGAACCATaGTTTCTTCTTTTTCTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: IDSSLPFLRLNLELPDLALLREP*FLLFLP Trigger: CGGGAGAAAAAGAAGAAACCATGGTTCTCTCAGCAA...AGCCAAATCAGGAAGCTCTAGGTTCAGCCTCAAGAAAGGAAGTGAAGAATCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGCATAACCTATGGATGTATCTCAACAGCCAAAGACAGACAGGCTGTAACAAGCCATTTGGAGACTTaGTTTGCCCAGATTTTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LCITYGCISTAKDRQAVTSHLET*FAQIFY Trigger: ATAGAAAATCTGGGCAAAGCAAGTCTCCAAATGGCT...TGTTACAGCCTGTCTGTCTTTGGCTGTTGAGATACATCCATAGGTTATGCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR-3UTR TCA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTTGTTTAGCCACCAACTaGCTCCAGAGAATAATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: DVKVDQNYQQPGLHLVTACLATN*LQRIMK Trigger: TTTCATTATTCTCTGGAGTCAGTTGGTGGCTAAACA...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCAAGAACAGGATTTTGCTTTGAATTCTGGAGAAAGTCGAACCCTTGGGAAGACTATGTGTGGCATCTaGTATGTAACAGGAAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: NQEQDFALNSGESRTLGKTMCGI*YVTGKS Trigger: TGATTTTCCTGTTACATAGCAGATGCCACACATAGT...CTTCCCAAGGGTTCGACTTTCTCCAGAATTCAAAGCAAAATCCTGTTCTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATATCTCCTGTTGCTGCTTTTCACTAATAATTTGACTCCTCGACTTAGCTTAATGTTTCGTCAGTGTTaGGATAGACTAACTATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: IYLLLLLFTNNLTPRLSLMFRQC*DRLTML Trigger: AAGCATAGTTAGTCTATCTCAACACTGACGAAACAT...TAAGCTAAGTCGAGGAGTCAAATTATTAGTGAAAAGCAGCAACAGGAGATATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGGATCTACAGCTGGGCTaGCTTGCAGGGTCTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EFASQQPTQSLGGRGGRGDLQLG*LAGSGR Trigger: CCTCCCAGACCCTGCAAGCAAGCCCAGCTGTAGATC...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR GCA 72 bp | GCTTGCAGGGTCTGGGAGGCAGTCCCTAGTACTGGATaGCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ACRVWEAVPSTG*QKTKASPSRVL Trigger: GAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGGCATCCAGTACTAGGGACTGCCTCCCAGACCCTGCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CCA 72 bp | AAGAGGGGGAGCTTCGCTGGGATGGAAGGCAGGCAGTaGCTGAGGCCAGGGGTGCTCCCTACAATGTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KRGSFAGMEGRQ*LRPGVLPTMFV Trigger: GACAAACATTGTAGGGAGCACCCCTGGCCTCAGCCACTGCCTGCCTTCCATCCCAGCGAAGCTCCCCCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGGTCCAGGATCCAAACTaGGTGGGTGGGAGGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EFASQQPTQSLGGRGGRGVQDPN*VGGRGF Trigger: GAAACCCCTCCCACCCACCAAGTTTGGATCCTGGAC...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCACTTCAGACCTCATCCTaGAAGATGGGTCAAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EALVPSRLGQLPLVVEGPLQTSS*KMGQAP Trigger: GGGAGCTTGACCCATCTTCAAGGATGAGGTCTGAAG...TGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR GCA 72 bp | CTGTCTCAGGAAGCCTGGCTTGTTCCCTGCCACGCCTaGTCAATGTCAGGACTGCTGACCAAACAGGCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQEAWLVPCHA*SMSGLLTKQAA Trigger: AGCCGCCTGTTTGGTCAGCAGTCCTGACATTGAGCAGGCGTGGCAGGGAACAAGCCAGGCTTCCTGAGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | AAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTaGCAGCAGCAGCAGCAACAGCAGCAGCAGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: KGQPLQGPLMQQ*QQQQQQQQQHF Trigger: AAAATGCTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CCA 72 bp | GGTAGGATGCACAGCTCGGGCAAGGTTACCCAGAGTTaGGCGGGGAGAGAGACCTGCACTGCCCATATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GRMHSSGKVTQS*AGRETCTAHMH Trigger: ATGCATATGGGCAGTGCAGGTCTCTCTCCCCGCCCAACTCTGGGTAACCTTGCCCGAGCTGTGCATCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | CGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTaGTTGAGGGGCCATCCAGGTCTAGGTATCAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RWSRVAWDSFLW*LRGHPGLGISH Trigger: ATGACTGATACCTAGACCTGGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | AAGCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTaGTGGTTGAGGGGCCATCCAGGTCTAGGTATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KRWSRVAWDSFL*WLRGHPGLGIS Trigger: ACTGATACCTAGACCTGGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | GCCCAACATTCGGGGACAATTCCATCAGCCGGAGTGTaGGGCAGCTGGTCACACTGCCCCCGTCAAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AQHSGTIPSAGV*GSWSHCPRQEV Trigger: TACTTCTTGACGGGGGCAGTGTGACCAGCTGCCTCACACTCCGGCTGATGGAATTGTCCCCGAATGTTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR TCA 72 bp | GGTGCAGGAGGGAGAGACGTAAGTGTGAGGAGAGAGTaGCCCCGGGAGGGTCCAGGGCAGCAAAGATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: GAGGRDVSVRRE*PREGPGQQRYN Trigger: ATTGTATCTTTGCTGCCCTGGACCCTCCCGGGGTCACTCTCTCCTCACACTTACGTCTCTCCCTCCTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | GGAATACTGTTCAAGCTGAGGTCCAGGATCCAAACTTaGTGGGTGGGAGGGGTTTCCCCTCCCTCCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GILFKLRSRIQT*WVGGVSPPSLS Trigger: GGAGAGGGAGGGAGGGGAAACCCCTCCCACCCACCAAGTTTGGATCCTGGACCTCAGCTTGAACAGTATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTGATCTACAGCTGGGCTaGCTTGCAGGGTCTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AQSRGFQKILPQVSSVTIDLQLG*LAGSGR Trigger: CCTCCCAGACCCTGCAAGCAAGCCCAGCTGTAGATC...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR TCA 72 bp | TTCACTCTTCCCGTCGCTCCTGCCCCTGGATGGGTCTaGTTTCAAGTCCAGAACAGCAGCAGGCAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: FTLPVAPAPGWV*FQVQNSSRQTQ Trigger: CTGTGTCTGCCTGCTGCTGTTCTGGACTTGAAATCAGACCCATCCAGGGGCAGGAGCGACGGGAAGAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | ATGTCTGCGCTGAGCGTCCCTGCCCCCAGTTGGCTCTaGTTGGAAAATAAAGTTGCCAGAGGCCAGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MSALSVPAPSWL*LENKVARGQRL Trigger: CAGCCTCTGGCCTCTGGCAACTTTATTTTCCAATCAGAGCCAACTGGGGGCAGGGACGCTCAGCGCAGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR TCA 72 bp | GCTCCAGAAATCACAAGGGAACCTGCATGTCTGCGCTaGGCGTCCCTGCCCCCAGTTGGCTCTGATTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: APEITREPACLR*ASLPPVGSDWK Trigger: TTTCCAATCAGAGCCAACTGGGGGCAGGGACGCTCAGCGCAGACATGCAGGTTCCCTTGTGATTTCTGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR GCA 72 bp | AGGAATGCGGGCTCAGGACTTGGCACAGTGCTAGAGTaGTTGCCTAGCATGCGTGGAGCCCTTGATTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RNAGSGLGTVLE*LPSMRGALDSS Trigger: AGAGGAATCAAGGGCTCCACGCATGCTAGGCAAGCACTCTAGCACTGTGCCAAGTCCTGAGCCCGCATTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR GCA 72 bp | TTTCGGCTCCAGAAATCACAAGGGAACCTGCATGTCTaGGCTGAGCGTCCCTGCCCCCAGTTGGCTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: FRLQKSQGNLHV*AERPCPQLALI Trigger: AATCAGAGCCAACTGGGGGCAGGGACGCTCAGCGCAGACATGCAGGTTCCCTTGTGATTTCTGGAGCCGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | ATACTGTTCAAGCTGAGGTCCAGGATCCAAACTTGGTaGGTGGGAGGGGTTTCCCCTCCCTCCCTCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILFKLRSRIQTW*VGGVSPPSLSL Trigger: AAGGGAGAGGGAGGGAGGGGAAACCCCTCCCACCCACCAAGTTTGGATCCTGGACCTCAGCTTGAACAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CCA 72 bp | CTAGGAAGCCTTCACTCTTCCCGTCGCTCCTGCCCCTaGATGGGTCTGATTTCAAGTCCAGAACAGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGSLHSSRRSCP*MGLISSPEQQQ Trigger: CTGCTGCTGTTCTGGACTTGAAATCAGACCCATCCAGGGGCAGGAGCGACGGGAAGAGTGAAGGCTTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | AAGCTGTCAGATGTTCTTGAAGGTCAGACTTGGAGCTaGGACCCTGGTGGGCAGGGGCCACACCTTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLSDVLEGQTWS*DPGGQGPHLDG Trigger: TCCATCAAGGTGTGGCCCCTGCCCACCAGGGTCTCAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | AGCTCACACCCAATGTCTTCCCTTGGCTCCTGTAGATaGAGGCTGAAGGTCATGTATCCCCCTCCCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: SSHPMSSLGSCR*RLKVMYPPPHT Trigger: GGTGTGGGGAGGGGGATACATGACCTTCAGCCTTCATCTACAGGAGCCAAGGGAAGACATTGGGTGTGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR GCA 72 bp | TTGTGTTATTTCGGCTCCAGAAATCACAAGGGAACCTaGATGTCTGCGCTGAGCGTCCCTGCCCCCAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LCYFGSRNHKGT*MSALSVPAPSW Trigger: CCAACTGGGGGCAGGGACGCTCAGCGCAGACATGCAGGTTCCCTTGTGATTTCTGGAGCCGAAATAACACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR GCA 72 bp | ACAGCAGATTGGGTCATCCTACGGAGAAGGCCCACGTaGCTCACTGCATCTGCGGAGAGTTGTGAACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: TADWVILRRRPT*LTASAESCEPQ Trigger: TTGTGGTTCACAACTCTCCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATCTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | GAGATCTCCTGGGCAGGAAGGAAATGGCTGAAGCCCTaGGGGAAGCCAGAGGAGGAATTTATGCTCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: EISWAGRKWLKP*GKPEEEFMLWT Trigger: TGTCCAGAGCATAAATTCCTCCTCTGGCTTCCCCCAGGGCTTCAGCCATTTCCTTCCTGCCCAGGAGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CCA 72 bp | TTCCTCATCGGGGATTTCACACTGCAGACAACTCCCTaGGTAGGATGCACAGCTCGGGCAAGGTTACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLIGDFTLQTTP*VGCTARARLPR Trigger: TCTGGGTAACCTTGCCCGAGCTGTGCATCCTACCCAGGGAGTTGTCTGCAGTGTGAAATCCCCGATGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | CACAGGCAGAGTGGTGGTTTAGTGAGAGTCTATGACTaGAAGGGGCAGCAGCTGGGTGAAGCAACGAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HRQSGGLVRVYD*KGQQLGEATSA Trigger: AGCACTCGTTGCTTCACCCAGCTGCTGCCCCTTCCAGTCATAGACTCTCACTAAACCACCACTCTGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR GCA 72 bp | TCTGAGCATAATTTAGGAACTCGGAAGACACCACTCTaGCATTTCCACGGGCAGCGTCTTCAGGGGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SEHNLGTRKTPL*HFHGQRLQGQG Trigger: GCCTTGCCCCTGAAGACGCTGCCCGTGGAAATGGCAGAGTGGTGTCTTCCGAGTTCCTAAATTATGCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR GCA 72 bp | ACAACTCTAGGAAGCCTTCACTCTTCCCGTCGCTCCTaGCCCTGGATGGGTCTGATTTCAAGTCCAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: TTLGSLHSSRRS*PWMGLISSPEQ Trigger: CTGTTCTGGACTTGAAATCAGACCCATCCAGGGGCAGGAGCGACGGGAAGAGTGAAGGCTTCCTAGAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | ACCTTGGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTTaGAACCATTGGGGACGCTTCCAGTGGTTGATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLALLSCSLEAL*NHWGRFQWLIG Trigger: GCCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | GCTCTGGACAAAGATTCCCAAGCTGTCAGATGTTCTTaGAGGTCAGACTTGGAGCTGAGACCCTGGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALDKDSQAVRCS*RSDLELRPWWA Trigger: TGCCCACCAGGGTCTCAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | TCCCCCAAAGTGACTTCTCAAAGTTCACTCGGCCTTTaGACATCTCTGAGAGTGGGCACAGTCCCTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPKVTSQSSLGL*TSLRVGTVPVR Trigger: CCTGACAGGGACTGTGCCCACTCTCAGAGATGTTCAAAGGCCGAGTGAACTTTGAGAAGTCACTTTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | GAACCCTTGGGAAGTTTCTTCTGTCTCGGTGCACCTTaGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EPLGSFFCLGAP*PCFPALWRLFG Trigger: TCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAGAAGAAACTTCCCAAGGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CCA 72 bp | GAACCTGAAGGAATAAGAATCTCTCCAGAGATCTCCTaGGCAGGAAGGAAATGGCTGAAGCCCTGGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EPEGIRISPEIS*AGRKWLKPWGK Trigger: CTTCCCCCAGGGCTTCAGCCATTTCCTTCCTGCCCAGGAGATCTCTGGAGAGATTCTTATTCCTTCAGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGTCTCAGGAAGCCTGGCTTGTTCCCTGCCACGCCTGCTCAATGTCAGGAAAGCCATTTGGAGACTaGCTTTGCCCAGATTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TLSQEAWLVPCHACSMSGKPFGD*LCPDFL Trigger: TAGAAAATCTGGGCAAAGCAAGTCTCCAAATGGCTT...TCCTGACATTGAGCAGGCGTGGCAGGGAACAAGCCAGGCTTCCTGAGACAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGGCAGTGAGAAAAGCATGCTGGACTCTGAGCAGATTCATGTTACATCAGCAAGGTTACCCAGAGTaGGGCGGGGAGAGAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLAVRKACWTLSRFMLHQQGYPE*GGERDL Trigger: CAGGTCTCTCTCCCCGCCCAACTCTGGGTAACCTTG...CTGATGTAACATGAATCTGCTCAGAGTCCAGCATGCTTTTCTCACTGCCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | TTGGAGCTGAGACCCTGGTGGGCAGGGGCCACACCTTaGTGGACTAATTATACATGTCTCTTGCTATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LELRPWWAGATP*WTNYTCLLLSL Trigger: GAGAGATAGCAAGAGACATGTATAATTAGTCCATCAAGGTGTGGCCCCTGCCCACCAGGGTCTCAGCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | ACCTCTTTGAGGTGCATCAACTTCAGACCTCATCCTTaGAGATGGGTCAAGCTCCCACACCACAGGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSLRCINFRPHP*RWVKLPHHRQS Trigger: ACTCTGCCTGTGGTGTGGGAGCTTGACCCATCTTCAAGGATGAGGTCTGAAGTTGATGCACCTCAAAGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | CTCCCCACACCCCCACCAGGCACTAGGATATCAGAGTaGTTGACAAGTGAATTCGCTAGGGTAGTTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPTPPPGTRISE*LTSEFARVVSN Trigger: GTTGGAAACTACCCTAGCGAATTCACTTGTCAATCACTCTGATATCCTAGTGCCTGGTGGGGGTGTGGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | GTCTGCAGTAGAACCCCACCCAATCTTTGCCCTCACTaGAATACTGTTCAAGCTGAGGTCCAGGATCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VCSRTPPNLCPH*NTVQAEVQDPN Trigger: GTTTGGATCCTGGACCTCAGCTTGAACAGTATTCCAGTGAGGGCAAAGATTGGGTGGGGTTCTACTGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR TCA 72 bp | AGCCAAAGACACACACACACAGAGAGATCATGTCATTaGACCCAGAATGGCCGTACTGGGCTTGATTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQRHTHTERSCH*TQNGRTGLDSL Trigger: CAGGGAATCAAGCCCAGTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGTGTGTGTGTCTTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | TTGGAGGCTCTTTGGAACCATTGGGGACGCTTCCAGTaGTTGATTGGCCTTGTCTTTAGGGCTCTTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LEALWNHWGRFQ*LIGLVFRALSV Trigger: AACAGAAAGAGCCCTAAAGACAAGGCCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CCA 72 bp | TTGCTTTCCTGCTCTTTGGAGGCTCTTTGGAACCATTaGGGACGCTTCCAGTGGTTGATTGGCCTTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLSCSLEALWNH*GRFQWLIGLVF Trigger: AAAGACAAGGCCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGGAATTTATGCTCTGGACAAAGATTCCCAAGCTGTCAGATGTTCTTGAACTGTCTCGGTGCACCTaGGCCTTGCTTTCCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EEEFMLWTKIPKLSDVLELSRCT*ALLSCS Trigger: AGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAG...TTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGCATAAATTCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGACACACACACACAGAGAGATCATGTCATTGAACCCAGAATGGCCGTACCTCCAGTTAAGCCATTaGGAGACTTGCTTTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PKTHTHREIMSLNPEWPYLQLSH*ETCFAQ Trigger: CTGGGCAAAGCAAGTCTCCAAATGGCTTAACTGGAG...GTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGTGTGTGTGTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | AAGCCCTGGGGGAAGCCAGAGGAGGAATTTATGCTCTaGACAAAGATTCCCAAGCTGTCAGATGTTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPWGKPEEEFML*TKIPKLSDVLE Trigger: TTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGCATAAATTCCTCCTCTGGCTTCCCCCAGGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCGGCAGTGTTACTGAGTTTCTTCTTCCCTCTTCTCAATGTGGCCATATTGAAGGCTCTTTGGAACCATaGGGGACGCTTCCAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IGSVTEFLLPSSQCGHIEGSLEP*GTLPVV Trigger: AACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCC...TTCAATATGGCCACATTGAGAAGAGGGAAGAAGAAACTCAGTAACACTGCCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTATTTACCTGAGATTATaGTCTCCTTGCCTGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PRFSLSLLSNLQFGDSVCIYLRL*SPCLCR Trigger: TCTGCACAGGCAAGGAGACAATAATCTCAGGTAAAT...ACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAGAGAGAAGAAAAATTGTCCAGTGGGATCCATCTTAACCCAACAGTTTTCCTCAGGAAGCCTGGCTaGTTCCCTGCCACGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IKREEKLSSGIHLNPTVFLRKPG*FPATPA Trigger: AGCAGGCGTGGCAGGGAACAAGCCAGGCTTCCTGAG...GAAAACTGTTGGGTTAAGATGGATCCCACTGGACAATTTTTCTTCTCTCTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | CAGTTGCCACCAGCAGCTAGAGTCACTTCTCTCCGGTaGCATTTCCTGTCTTTTTACCTCTATTTGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLPPAARVTSLR*HFLSFYLYLVK Trigger: CTTCACCAAATAGAGGTAAAAAGACAGGAAATGTCACCGGAGAGAAGTGACTCTAGCTGCTGGTGGCAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | GGTCTACCCCAATTGAACTTGGATCTTCCCCCAAAGTaGCTTCTCAAAGTTCACTCGGCCTTTGAACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLPQLNLDLPPK*LLKVHSAFEHL Trigger: GAGATGTTCAAAGGCCGAGTGAACTTTGAGAAGTCACTTTGGGGGAAGATCCAAGTTCAATTGGGGTAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | ACACTTCATCCTAGGCCCTGGATTGTGCATAACCTATaGATGTATCTCAACAGCCAAAGACAGACAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLHPRPWIVHNL*MYLNSQRQTGC Trigger: ACAGCCTGTCTGTCTTTGGCTGTTGAGATACATCCATAGGTTATGCACAATCCAGGGCCTAGGATGAAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTAAATTCAGAGTTCTATaGAACTATGTGTGGCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRFSLSLLSNLQFGDSVCKFRVL*NYVWHL Trigger: CAGATGCCACACATAGTTCAATAGAACTCTGAATTT...ACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTACAGGCCTTGTCAATTaGAAAACTCTTGTGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLACLCSPISNSGIVCVCTGLVN*KTLVSK Trigger: TTTGCTCACAAGAGTTTTCAAATTGACAAGGCCTGT...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGACAGTTGCCACCAGCAGCTAGAGTCACTTCTCTCCGGTGACATTTCCTCCTTTATCTTGGATTaGCTTTTCTCCTGTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RKDSCHQQLESLLSGDISSFILD*LFSCRV Trigger: AACTCTACAGGAGAAAAGCAAATCCAAGATAAAGGA...GGAAATGTCACCGGAGAGAAGTGACTCTAGCTGCTGGTGGCAACTGTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCTATTGGAACAGTGAACCTGAAGGAATAAGAATCTCTCCAGAGATCTCCGAGAAAGTCGAACCCTaGGGAAGTTTCTTCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGYWNSEPEGIRISPEISEKVEP*GSFFCL Trigger: GAGACAGAAGAAACTTCCCAAGGGTTCGACTTTCTC...GGAGATCTCTGGAGAGATTCTTATTCCTTCAGGTTCACTGTTCCAATAGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | GGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTaGCGATTTCAGTCTCAAAAGAGATCCAAGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GAFRRFSLKCLQ*RFQSQKRSKSI Trigger: GATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR TCA 72 bp | ACGGACGCCTTCTGTCTCCATTTAAGATGCATCTTCTaGCATCCATTAAGCCAGTCTAGAAAATCCCTCACG | + |
|
Preference number: 3 (lower is better) Translates to: TDAFCLHLRCIF*HPLSQSRKSLT Trigger: CGTGAGGGATTTTCTAGACTGGCTTAATGGATGTCAGAAGATGCATCTTAAATGGAGACAGAAGGCGTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR GCA 72 bp | ATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTaGATTTGGTCACTGCTGCGGGGCGAGGAGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MLKLIRIISNLV*IWSLLRGEEVS Trigger: ACTTACCTCCTCGCCCCGCAGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR GCA 72 bp | GGGTGCTCCCTACAATGTTTGTCATGCTCAACATTTTaGCAAGGGCAAATTTCACTAGTGTCAACCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GCSLQCLSCSTF*QGQISLVSTKA Trigger: AGCCTTGGTTGACACTAGTGAAATTTGCCCTTGGCAAAATGTTGAGCATGACAAACATTGTAGGGAGCACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | AAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTaGTCACTGCTGCGGGGCGAGGAGGTAAGTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLIRIISNLVCI*SLLRGEEVSFL Trigger: AAGAAAACTTACCTCCTCGCCCCGCAGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGATTCCCAAGCTGTCAGATGTTCTTGAAGGTCAGACTTGGAGCTGAGACCTTAGGGCTCTTTCTGTaGAACTCTTTGGATCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QRFPSCQMFLKVRLGAETLGLFL*NSLDLL Trigger: TAACAGATCCAAAGAGTTCAACAGAAAGAGCCCTAA...GGTCTCAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGCTTGGGAATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | TTACGTAACAAATGTTTTAAAGCAGAGAACTGTGTGTaGACATCACGCCCGGGATGTGGTGACGGTAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRNKCFKAENCV*TSRPGCGDGKC Trigger: ACACTTACCGTCACCACATCCCGGGCGTGATGTTCACACACAGTTCTCTGCTTTAAAACATTTGTTACGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CCA 72 bp | CTATATCCTAAAGAGACAACTGTGTTCCCCCTTCTTTaGCTATCAGGCTATTGGAACAGTGAACCTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LYPKETTVFPLL*LSGYWNSEPEG Trigger: TCCTTCAGGTTCACTGTTCCAATAGCCTGATAGCCAAAGAAGGGGGAACACAGTTGTCTCTTTAGGATATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CCA 72 bp | AAAGCCCAGGATGTATCTCCTAGACTAGATCTAAAGTaGGTGACATTGGACAATTCACAGGCTTACTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KAQDVSPRLDLK*VTLDNSQAYSE Trigger: CTCAGAGTAAGCCTGTGAATTGTCCAATGTCACCCACTTTAGATCTAGTCTAGGAGATACATCCTGGGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR TCA 72 bp | ACAGGCTGGATATTGTCCAGGGACAATATCTGGAGATaGTATTGGAATGGAATGTTGGAGACAGATGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: TGWILSRDNIWR*YWNGMLETDET Trigger: GGTTTCATCTGTCTCCAACATTCCATTCCAATATCATCTCCAGATATTGTCCCTGGACAATATCCAGCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | CAGGCAAAAGCTTTAATCGTTTATCCGTTTCCTACATaGGTCACAGAAACTAGGCCACATCTAAATCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QAKALIVYPFPT*VTETRPHLNHR Trigger: CCTGTGATTTAGATGTGGCCTAGTTTCTGTGACCCATGTAGGAAACGGATAAACGATTAAAGCTTTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGCATAACCTATGGATGTATCTCAACAGCCAAAGACAGACAGGCTGTAACAGTCATGCTCAACATTTaGCCAAGGGCAAATTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LCITYGCISTAKDRQAVTVMLNI*PRANFT Trigger: AGTGAAATTTGCCCTTGGCAAAATGTTGAGCATGAC...TGTTACAGCCTGTCTGTCTTTGGCTGTTGAGATACATCCATAGGTTATGCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR TCA 72 bp | AGCATTCATCACTGTAATTCCCATCGAAGGCATAACTaGAGCAGTTCAAAGTTACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: SIHHCNSHRRHN*SSSKLHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTAACTTTGAACTGCTTCAGTTATGCCTTCGATGGGAATTACAGTGATGAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| 3UTR CCA 72 bp | CCTGCAAAATCAAGAACAGGATTTTGCTTTGAATTCTaGAGAAAGTCGAACCCTTGGGAAGTTTCTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PAKSRTGFCFEF*RKSNPWEVSSV Trigger: GACAGAAGAAACTTCCCAAGGGTTCGACTTTCTCCAGAATTCAAAGCAAAATCCTGTTCTTGATTTTGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGGAATTTATGCTCTGGACAAAGATTCCCAAGCTGTCAGATGTTCTTGAACTCAATGTGGCCATATaGAATATATCTCCTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EEEFMLWTKIPKLSDVLELNVAI*NISPVA Trigger: AGCAACAGGAGATATATTCAATATGGCCACATTGAG...TTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGCATAAATTCCTCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CCA 72 bp | CTTGTGAGCAAATTCAGAGTTCTATTGAACTATGTGTaGCATCTGCTATGTAACAGGAAAATCAGGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVSKFRVLLNYV*HLLCNRKIRVL Trigger: AAGGACCCTGATTTTCCTGTTACATAGCAGATGCCACACATAGTTCAATAGAACTCTGAATTTGCTCACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTCCTCTGTCAGCATTAGAGAACTAAATAGAGAGAAAGGGAGTGATTTCATCGAACAGGATTTTGCTTaGAATTCTGGAGAAAGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: DSSVSIRELNREKGSDFIEQDFA*NSGESR Trigger: TCGACTTTCTCCAGAATTCAAAGCAAAATCCTGTTC...GATGAAATCACTCCCTTTCTCTCTATTTAGTTCTCTAATGCTGACAGAGGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR TCA 72 bp | TATTTAATTAAACGAACCATCCAAATACCCAGGGGATaGGTGGGAAGAAATAGATCGGTAGAATTAACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: YLIKRTIQIPRG*VGRNRSVELTD Trigger: GTCTGTTAATTCTACCGATCTATTTCTTCCCACTCATCCCCTGGGTATTTGGATGGTTCGTTTAATTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR GCA 90 bp | GCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCATCCCCTTGCTCGGCAGCGTaGAGCCCAGGAGCGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALVPSRLGQLPLVVEGPSPCSAA*SPGAPR Trigger: TCGCGGCGCTCCTGGGCTGCACGCTGCCGAGCAAGG...GGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCACGGGAGAGGCGCCCTTaGTCGGCAGCGTGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPPGSSDAAVAAAAATARERRP*SAACSP Trigger: TGGGCTGCACGCTGCCGAGCAAGGGCGCCTCTCCCG...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAGATTGGGTCATCCTACGGAGAAGGCCCACGTGCCTCACTGCATCTGCGGCCTTGCTCGGCAGCGTaGAGCCCAGGAGCGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QQIGSSYGEGPRASLHLRPCSAA*SPGAPR Trigger: TCGCGGCGCTCCTGGGCTGCACGCTGCCGAGCAAGG...CCGCAGATGCAGTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATCTGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCATCTGCTCCTCGCCACTaGCCATCCTGTGCGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAPPGSSDAAVAAAAATASAPRH*PSCAPG Trigger: ACCTGGCGCACAGGATGGCCAGTGGCGAGGAGCAGA...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGGCAGTCAGGGACCTTTaGGCTGCCCCTCGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFASQQPTQSLGGRGGRGAVRDL*AAPRRA Trigger: GGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGC...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGGCAGTCAGGGACCTTTaGGCTGCCCCTCGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PENKGQPLQGPLMQQWQQAVRDL*AAPRRA Trigger: GGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGC...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGGCCGACGGGGACATGGGAAGGGCACTGAGAGAATCTATTCCTCTTTTCGGGAGAGGCGCCCTTaGTCGGCAGCGTGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGRRGHGKGTERIYSSFRERRP*SAACSP Trigger: TGGGCTGCACGCTGCCGAGCAAGGGCGCCTCTCCCG...AAAAGAGGAATAGATTCTCTCAGTGCCCTTCCCATGTCCCCGTCGGCCTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCATCCCGCTGTATGGACTaGGGCTTGGTCTTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PAPPGSSDAAVAAAAATASRCMD*GLVFRT Trigger: GGTTCTGAAGACCAAGCCCCAGTCCATACAGCGGGA...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGTTCTTCCGGTACGTCTaGTCCTCGCCACTGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PENKGQPLQGPLMQQWQQFFRYV*SSPLAI Trigger: GATGGCCAGTGGCGAGGAGCAGACGTACCGGAAGAA...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGAAGTTTCTTCTGTCTCGGTGCACCTTGGCCTTGCTTTCCTGCTCTTTCCTTGCTCGGCAGCGTaGAGCCCAGGAGCGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PWEVSSVSVHLGLAFLLFPCSAA*SPGAPR Trigger: TCGCGGCGCTCCTGGGCTGCACGCTGCCGAGCAAGG...AAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAGAAGAAACTTCCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTTCACTCAGTCGCTaGTGCTCAACACACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQPSLSR*CSTHRW Trigger: CCACCTGTGTGTTGAGCACCAGCGACTGAGTGAAGG...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCACACTGCATCATCTGCTaGACGTTCTTCCGGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPPGSSDAAVAAAAATAHCIIC*TFFRYV Trigger: GACGTACCGGAAGAACGTCCAGCAGATGATGCAGTG...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGTTCTCTCTGCTACTGTaGGCAGTCAGGGACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQFSLLL*AVRDLC Trigger: GCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAA...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGAGAGCGCATCTTCACTaGATACAGGCACGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQRAHLH*IQARRA Trigger: TGCTCTCCGTGCCTGTATTCAGTGAAGATGCGCTCT...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQLLASQ*EGWKGT Trigger: TGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAG...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTGTGTCGGGAGAGGCGCCCTTaGTCGGCAGCGTGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLACLCSPISNSGIVCVCRERRP*SAACSP Trigger: TGGGCTGCACGCTGCCGAGCAAGGGCGCCTCTCCCG...ACACACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACAGAGAGATCATGTCATTGAACCCAGAATGGCCGTACTGGGCTCGGGAGAGGCGCCCTTaGTCGGCAGCGTGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: THTHREIMSLNPEWPYWARERRP*SAACSP Trigger: TGGGCTGCACGCTGCCGAGCAAGGGCGCCTCTCCCG...AGCCCAGTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGTGTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGCCTTCACTCAGTCGCTaGTGCTCAACACACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFASQQPTQSLGGRGGRGPSLSR*CSTHRW Trigger: CCACCTGTGTGTTGAGCACCAGCGACTGAGTGAAGG...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGTTGACATGGCCATTTaGAAGACGGTTGACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAPPGSSDAAVAAAAATAVDMAI*KTVDTA Trigger: GGCTGTGTCAACCGTCTTCCAAATGGCCATGTCAAC...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCTGGGCCAATGTAATTaGGTCTCTCCAGCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQLGQCN*VSPARC Trigger: ACATCGAGCTGGAGAGACTCAATTACATTGGCCCAG...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGTCCTTCACTCTCGTATaGAGCCAAGTAGAGCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQSFTLV*SQVERI Trigger: GATGCGCTCTACTTGGCTTCATACGAGAGTGAAGGA...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGAGACACTGCATCATCTaGTGGACGTTCTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQRHCII*WTFFRY Trigger: GTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCT...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCATTTCGGATCAGACACTaGATCATCTGCTGGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPPGSSDAAVAAAAATAFRIRH*IICWTF Trigger: GAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAA...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGCACTGCATCATCTGCTaGACGTTCTTCCGGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: EFASQQPTQSLGGRGGRGHCIIC*TFFRYV Trigger: GACGTACCGGAAGAACGTCCAGCAGATGATGCAGTG...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGTTCTGCACAAATGCCTaGACAAACTCTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQFCTNA*TNSSGP Trigger: TGGCCCAGAAGAGTTTGTTCAGGCATTTGTGCAGAA...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGTCCTTCACTCTCGTATaGAGCCAAGTAGAGCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PENKGQPLQGPLMQQWQQSFTLV*SQVERI Trigger: GATGCGCTCTACTTGGCTTCATACGAGAGTGAAGGA...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGAGACACTGCATCATCTaGTGGACGTTCTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EFASQQPTQSLGGRGGRGRHCII*WTFFRY Trigger: GTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCT...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCATCACAATCTTCTCTCTaGTACTGTGAGCAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSDAAVAAAAATAAASQSSL*YCEQSG Trigger: CCCTGACTGCTCACAGTAGCAGAGAGAAGATTGTGA...TGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGATGAATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTGCTCCTCGCCACTaGCCATCCTGTGCGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKMNHAQSRGFQKILPQVSAPRH*PSCAPG Trigger: ACCTGGCGCACAGGATGGCCAGTGGCGAGGAGCAGA...CACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | TGGAATACTGTTCAAGCTGAGGTCCAGGATCCAAACTaGGTGGGTGGGAGGGGTTTCCCCTCCCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WNTVQAEVQDPN*VGGRGFPSLPL Trigger: GAGAGGGAGGGAGGGGAAACCCCTCCCACCCACCAAGTTTGGATCCTGGACCTCAGCTTGAACAGTATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | CTGTCTCGGTGCACCTTGGCCTTGCTTTCCTGCTCTTaGGAGGCTCTTTGGAACCATTGGGGACGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRCTLALLSCS*EALWNHWGRFQ Trigger: CTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | AACGTGAAGGGGAGAGTAGTCATCGCGAACAGCAGATaGGGTCATCCTACGGAGAAGGCCCACGTGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVKGRVVIANSR*GHPTEKAHVPH Trigger: GTGAGGCACGTGGGCCTTCTCCGTAGGATGACCCAATCTGCTGTTCGCGATGACTACTCTCCCCTTCACGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGTTCTGCACAAATGCCTaGACAAACTCTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PENKGQPLQGPLMQQWQQFCTNA*TNSSGP Trigger: TGGCCCAGAAGAGTTTGTTCAGGCATTTGTGCAGAA...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCTGGATGGATCCATCTaGTGCTCAAGAATGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQLDGSI*CSRMSN Trigger: GTTTGACATTCTTGAGCATCAGATGGATCCATCCAG...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGGCCGACGGGGACATGGGAAGGGCACTGAGAGAATCTATTCCTCTTTTCTGGATGAGATGAAGTaGCCTCCAGCACGGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGRRGHGKGTERIYSSFLDEMK*PPARER Trigger: CCTCTCCCGTGCTGGAGGTCACTTCATCTCATCCAG...AAAAGAGGAATAGATTCTCTCAGTGCCCTTCCCATGTCCCCGTCGGCCTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGTTTGAGGGTACAGCCCAACATTCGGGGACAATTCCATCAGCCGGAGCATAGCTGGATGAGATaGAGTGACCTCCAGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RACLRVQPNIRGQFHQPEHSWMR*SDLQHG Trigger: CCCGTGCTGGAGGTCACTTCATCTCATCCAGCTATG...CTCCGGCTGATGGAATTGTCCCCGAATGTTGGGCTGTACCCTCAAACAAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCACACTCTGTCAAGAGCTaGAGGATTTTAGGTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSDAAVAAAAATAAAHSVKS*RILGAI Trigger: AATTGCACCTAAAATCCTTCAGCTCTTGACAGAGTG...TGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGCTGGATGGATCCATCTaGTGCTCAAGAATGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EFASQQPTQSLGGRGGRGLDGSI*CSRMSN Trigger: GTTTGACATTCTTGAGCATCAGATGGATCCATCCAG...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACTCCACAGCTGTCCTCTaGGGACTGGTAGAGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDSTAVL*GLVEVS Trigger: CGAAACCTCTACCAGTCCGCAGAGGACAGCTGTGGA...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGATCCTTCTGCACAAATaGCTGAACAAACTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQILLHK*LNKLFW Trigger: CCAGAAGAGTTTGTTCAGGCATTTGTGCAGAAGGAT...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACTCCCGCTGTATGGACTaGGGCTTGGTCTTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDSRCMD*GLVFRT Trigger: GGTTCTGAAGACCAAGCCCCAGTCCATACAGCGGGA...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCCCGCTGTATGGACTaGGGCTTGGTCTTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: AQSRGFQKILPQVSSVTISRCMD*GLVFRT Trigger: GGTTCTGAAGACCAAGCCCCAGTCCATACAGCGGGA...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGTAGAAATTGCTGGATaGATCCATCTGATGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSDAAVAAAAATAAAVEIAG*IHLMLK Trigger: CTTGAGCATCAGATGGATCCATCCAGCAATTTCTAC...TGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | CACCTTGGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTaGGAACCATTGGGGACGCTTCCAGTGGTTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLGLAFLLFGGS*EPLGTLPVVDW Trigger: CCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | CGAACCCTTGGGAAGTTTCTTCTGTCTCGGTGCACCTaGGCCTTGCTTTCCTGCTCTTTGGAGGCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLGKFLLSRCT*ALLSCSLEALW Trigger: CCAAAGAGCCTCCAAAGAGCAGGAAAGCAAGGCCAAGGTGCACCGAGACAGAAGAAACTTCCCAAGGGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCACTCTGTCAAGAGCTaGAGGATTTTAGGTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PENKGQPLQGPLMQQWQQHSVKS*RILGAI Trigger: AATTGCACCTAAAATCCTTCAGCTCTTGACAGAGTG...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGTTTGAGGGTACAGCCCAACATTCGGGGACAATTCCATCAGCCGGAGACAAACCAGTTCCAATaGCCAAGCAGCCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RACLRVQPNIRGQFHQPETNQFQ*PSSHSW Trigger: CCAGCTATGGCTGCTTGGTCATTGGAACTGGTTTGT...CTCCGGCTGATGGAATTGTCCCCGAATGTTGGGCTGTACCCTCAAACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGATCCTTCTGCACAAATaGCTGAACAAACTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFASQQPTQSLGGRGGRGILLHK*LNKLFW Trigger: CCAGAAGAGTTTGTTCAGGCATTTGTGCAGAAGGAT...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGACCTTGCTCGGCAGCGTaGAGCCCAGGAGCGCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRPCSAA*SPGAPR Trigger: TCGCGGCGCTCCTGGGCTGCACGCTGCCGAGCAAGG...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAAGTTGTAGAAATTGCTaGATGGATCCATCTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSDAAVAAAAATAAASCRNC*MDPSDA Trigger: AGCATCAGATGGATCCATCCAGCAATTTCTACAACT...TGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | TGCTCTGGACAAAGATTCCCAAGCTGTCAGATGTTCTaGAAGGTCAGACTTGGAGCTGAGACCCTGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGQRFPSCQMF*KVRLGAETLVG Trigger: GCCCACCAGGGTCTCAGCTCCAAGTCTGACCTTCAAGAACATCTGACAGCTTGGGAATCTTTGTCCAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | GACCTCTTTGAGGTGCATCAACTTCAGACCTCATCCTaGAAGATGGGTCAAGCTCCCACACCACAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLFEVHQLQTSS*KMGQAPTPQAE Trigger: CTCTGCCTGTGGTGTGGGAGCTTGACCCATCTTCAAGGATGAGGTCTGAAGTTGATGCACCTCAAAGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAGATGAATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTTCTCTCTGCTACTGTaGGCAGTCAGGGACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKMNHAQSRGFQKILPQVFSLLL*AVRDLC Trigger: GCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAA...CACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGAAAATTTCTCAAAGTTaGCATGGCCATTTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQKISQS*HGHLED Trigger: GTCTTCCAAATGGCCATGTCAACTTTGAGAAATTTT...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | TCTACAGCTGGGCTTGCTTGCAGGGTCTGGGAGGCAGTCCCTAGTACTGGATGCATCCTTCTGCACAAATaGCTGAACAAACTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STAGLACRVWEAVPSTGCILLHK*LNKLFW Trigger: CCAGAAGAGTTTGTTCAGGCATTTGTGCAGAAGGAT...GCATCCAGTACTAGGGACTGCCTCCCAGACCCTGCAAGCAAGCCCAGCTGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGTGTAGTTGTAGAAATTaGTGGATGGATCCATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQGPLMQQWQQQQQQQQQCSCRN*WMDPSD Trigger: ATCAGATGGATCCATCCAGCAATTTCTACAACTACA...CTGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGCAGTCAGGGACCTTTaGGCTGCCCCTCGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKAVRDL*AAPRRA Trigger: GGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGC...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGATGAATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGCACTGCATCATCTGCTaGACGTTCTTCCGGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKMNHAQSRGFQKILPQVHCIIC*TFFRYV Trigger: GACGTACCGGAAGAACGTCCAGCAGATGATGCAGTG...CACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGTTGACATGGCCATTTaGAAGACGGTTGACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDVDMAI*KTVDTA Trigger: GGCTGTGTCAACCGTCTTCCAAATGGCCATGTCAAC...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGACAGTTGCCACCAGCAGCTAGAGTCACTTCTCTCCGGTGACATTTCCGAGAGACAGGCAAAGTaGGTGGTCTCAGAAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKDSCHQQLESLLSGDISERQAK*VVSEVA Trigger: TGCCACTTCTGAGACCACCCACTTTGCCTGTCTCTC...GGAAATGTCACCGGAGAGAAGTGACTCTAGCTGCTGGTGGCAACTGTCTTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR TCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTTCTGCACAAATGCCTaGACAAACTCTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQSRGFQKILPQVSSVTIFCTNA*TNSSGP Trigger: TGGCCCAGAAGAGTTTGTTCAGGCATTTGTGCAGAA...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTTTCTTCCGGTACGTCTaGTCCTCGCCACTGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCFFRYV*SSPLAI Trigger: GATGGCCAGTGGCGAGGAGCAGACGTACCGGAAGAA...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACTTTCGGATCAGACACTaGATCATCTGCTGGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDFRIRH*IICWTF Trigger: GAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAA...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCACATACCAGAGATGATTaGCATCAAAGAATTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSDAAVAAAAATAAAHTRDD*HQRIEV Trigger: AACTTCAATTCTTTGATGGCAATCATCTCTGGTATG...TGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | CTTGCTTTCCTGCTCTTTGGAGGCTCTTTGGAACCATaGGGGACGCTTCCAGTGGTTGATTGGCCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAFLLFGGSLEP*GTLPVVDWPCL Trigger: AAGACAAGGCCAATCAACCACTGGAAGCGTCCCCAATGGTTCCAAAGAGCCTCCAAAGAGCAGGAAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTGGTTGGAAAGGCACATaGCAGCGAGGCTGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCGWKGT*QRGCST Trigger: TGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACC...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTCACTCTGTCAAGAGCTaGAGGATTTTAGGTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: AQSRGFQKILPQVSSVTIHSVKS*RILGAI Trigger: AATTGCACCTAAAATCCTTCAGCTCTTGACAGAGTG...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTAGAGCGCATCTTCACTaGATACAGGCACGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCRAHLH*IQARRA Trigger: TGCTCTCCGTGCCTGTATTCAGTGAAGATGCGCTCT...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGTAGAAATTGCTGGATaGATCCATCTGATGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDVEIAG*IHLMLK Trigger: CTTGAGCATCAGATGGATCCATCCAGCAATTTCTAC...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTAAAGGGACAGGCCCATAATCTAACAGGAATGTCATTGATAGGACAGGCCGGTTGGAAAGGCACATaGCAGCGAGGCTGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VLKGQAHNLTGMSLIGQAGWKGT*QRGCST Trigger: TGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACC...GGCCTGTCCTATCAATGACATTCCTGTTAGATTATGGGCCTGTCCCTTTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTGGCAGTGAGAAAAGCATGCTGGACTCTGAGCAGATTCATGTTACATCAGGGTTGGAAAGGCACATaGCAGCGAGGCTGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VLAVRKACWTLSRFMLHQGWKGT*QRGCST Trigger: TGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACC...CTGATGTAACATGAATCTGCTCAGAGTCCAGCATGCTTTTCTCACTGCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 72 bp | GGGTTGCCCCTCTTCCAGTTCCTCCAGTTAAGCCATTaGGAGACTTGCTTTGCCCAGATTTTCTATTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLPLFQFLQLSH*ETCFAQIFYLA Trigger: GGCTAAATAGAAAATCTGGGCAAAGCAAGTCTCCAAATGGCTTAACTGGAGGAACTGGAAGAGGGGCAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS-3UTR TCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTCTGGGCCAATGTAATTaGGTCTCTCCAGCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCLGQCN*VSPARC Trigger: ACATCGAGCTGGAGAGACTCAATTACATTGGCCCAG...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCTTCTCTCTGCTACTGTaGGCAGTCAGGGACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSFSLLL*AVRDLC Trigger: GCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAA...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTTCCTTCACTCTCGTATaGAGCCAAGTAGAGCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCSFTLV*SQVERI Trigger: GATGCGCTCTACTTGGCTTCATACGAGAGTGAAGGA...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAATCCACAGCTGTCCTCTaGGGACTGGTAGAGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKSTAVL*GLVEVS Trigger: CGAAACCTCTACCAGTCCGCAGAGGACAGCTGTGGA...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTGCCAGTTTTCTTTGTaGTTGATTTCAGGCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AQSRGFQKILPQVSSVTICQFSL*LISGQL Trigger: AAGTTGGCCTGAAATCAAGCACAAAGAAAACTGGCA...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTTGCTCAACACACAGGTaGCAAACCTTAGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCCSTHR*QTLAMS Trigger: GCTCATGGCTAAGGTTTGCCACCTGTGTGTTGAGCA...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTCTGAACAAACTCTTCTaGGCCAATGTAATTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSRGFQKILPQVSSVTILNKLF*ANVIES Trigger: AGACTCAATTACATTGGCCCAGAAGAGTTTGTTCAG...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGATGAATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGGTAGAAATTGCTGGATaGATCCATCTGATGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKMNHAQSRGFQKILPQVVEIAG*IHLMLK Trigger: CTTGAGCATCAGATGGATCCATCCAGCAATTTCTAC...CACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTGTTGACATGGCCATTTaGAAGACGGTTGACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCVDMAI*KTVDTA Trigger: GGCTGTGTCAACCGTCTTCCAAATGGCCATGTCAAC...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GGAATAAGAATCTCTCCAGAGATCTCCTGGGCAGGAAGGAAATGGCTGAAGCCCAAGGTCTTCAAAGGATaGATAAAAATGTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIRISPEISWAGRKWLKPKVFKG*IKMSRG Trigger: GCCCCTGGACATTTTTATCCATCCTTTGAAGACCTT...GGGCTTCAGCCATTTCCTTCCTGCCCAGGAGATCTCTGGAGAGATTCTTATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR TCA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTAAAATTTCTCAAAGTTaGCATGGCCATTTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQSRGFQKILPQVSSVTIKISQS*HGHLED Trigger: GTCTTCCAAATGGCCATGTCAACTTTGAGAAATTTT...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGCATAACCTATGGATGTATCTCAACAGCCAAAGACAGACAGGCTGTAACACTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCITYGCISTAKDRQAVTLLASQ*EGWKGT Trigger: TGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAG...TGTTACAGCCTGTCTGTCTTTGGCTGTTGAGATACATCCATAGGTTATGCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTTTAGCCTGTCTCTGCTCTCCAATCTCCAATTCGGGGATAGTGTGTGTATATATTTGGGGTCTTaGTTGGTATTTTGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRFSLSLLSNLQFGDSVCIYLGS*LVFCLL Trigger: CAGGAGGCAAAATACCAACCAAGACCCCAAATATAT...ACACACACTATCCCCGAATTGGAGATTGGAGAGCAGAGACAGGCTAAACCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTaGCATTTGGTCACTGCTGCGGGGCGAGGAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVKVDQNYQQPG*HLVTAAGRGGK Trigger: CTTACCTCCTCGCCCCGCAGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | GATGGCGTCAGAAGGGTTAACCAACATGGCTGGAACTaGGCATTGTGCATTTTCATTAGCAGGGGATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: DGVRRVNQHGWN*ALCIFISRGSL Trigger: TAGTGATCCCCTGCTAATGAAAATGCACAATGCCAAGTTCCAGCCATGTTGGTTAACCCTTCTGACGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAAGACACTGCATCATCTaGTGGACGTTCTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKRHCII*WTFFRY Trigger: GTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCT...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACCATACCAGAGATGATTaGCATCAAAGAATTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDHTRDD*HQRIEV Trigger: AACTTCAATTCTTTGATGGCAATCATCTCTGGTATG...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAATGCTCAACACACAGGTaGCAAACCTTAGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKCSTHR*QTLAMS Trigger: GCTCATGGCTAAGGTTTGCCACCTGTGTGTTGAGCA...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | AAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTaGGTCACTGCTGCGGGGCGAGGAGGTAAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVDQNYQQPGLH*VTAAGRGGKFS Trigger: AGAAAACTTACCTCCTCGCCCCGCAGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | ACAAAATCTAGAACCAGTGGAGGTCAGAGCTTCGATTaGAACCTATCGAGCACAACTCTAGGAAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKSRTSGGQSFD*NLSSTTLGSLH Trigger: GTGAAGGCTTCCTAGAGTTGTGCTCGATAGGTTCAAATCGAAGCTCTGACCTCCACTGGTTCTAGATTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCTTCGGTTGTAGCCACTaGTGTCAAACATTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSFGCSH*CQTLLR Trigger: TCTCAGCAATGTTTGACAGCAGTGGCTACAACCGAA...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTATGAGCTCGTACGGATaGATGAATAACCGAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: NLGFHRAALCVSSISSKCMSSYG*MNNREL Trigger: TAGTTCTCGGTTATTCATGCATCCGTACGAGCTCAT...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| 3UTR CAA 72 bp | TTGGCCTTGTCTTTAGGGCTCTTTCTGTTGAACTCTTaGGATCTGTTAAGTGGAGAAACAGTGGCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LALSLGLFLLNS*DLLSGETVATA Trigger: TGCTGTAGCCACTGTTTCTCCACTTAACAGATCCAAAGAGTTCAACAGAAAGAGCCCTAAAGACAAGGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | TTTTTCGGGAGACTACACTTCATCCTAGGCCCTGGATaGTGCATAACCTATGGATGTATCTCAACAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFGRLHFILGPG*CITYGCISTAK Trigger: TTTGGCTGTTGAGATACATCCATAGGTTATGCACAATCCAGGGCCTAGGATGAAGTGTAGTCTCCCGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 72 bp | GATGTATCTCCTAGACTAGATCTAAAGTGGGTGACATaGGACAATTCACAGGCTTACTCTGAGTCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVSPRLDLKWVT*DNSQAYSESWL Trigger: AAGCCAGGACTCAGAGTAAGCCTGTGAATTGTCCAATGTCACCCACTTTAGATCTAGTCTAGGAGATACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGATCACAATCTTCTCTCTaGTACTGTGAGCAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRSQSSL*YCEQSG Trigger: CCCTGACTGCTCACAGTAGCAGAGAGAAGATTGTGA...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCTTCTCAAAGTTGACATaGCCATTTGGAAGACGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSFSKLT*PFGRRL Trigger: CAACCGTCTTCCAAATGGCCATGTCAACTTTGAGAA...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAATCTACCTGCTAGCTACACATAGTAGATGTGGAAGCCAAAGACACACATCTTACTTTGCCTCCTaGCTTCTCAATGAGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEIYLLATHSRCGSQRHTSYFAS*LLNERV Trigger: AACCCTCTCATTGAGAAGCCAGGAGGCAAAGTAAGA...TGTGTGTCTTTGGCTTCCACATCTACTATGTGTAGCTAGCAGGTAGATTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| 3UTR CAA 72 bp | GACTCTAAAGGTGTCATGGATTGGTTCCAATGCTATTaGTGTTATTTCGGCTCCAGAAATCACAAGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: DSKGVMDWFQCY*CYFGSRNHKGT Trigger: GGTTCCCTTGTGATTTCTGGAGCCGAAATAACACAAATAGCATTGGAACCAATCCATGACACCTTTAGAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGACTGGATGGATCCATCTaGTGCTCAAGAATGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRLDGSI*CSRMSN Trigger: GTTTGACATTCTTGAGCATCAGATGGATCCATCCAG...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | ATATATCTCCTGTTGCTGCTTTTCACTAATAATTTGACTCCTCGACTTAGCTTACTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYLLLLLFTNNLTPRLSLLLASQ*EGWKGT Trigger: TGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAG...TAAGCTAAGTCGAGGAGTCAAATTATTAGTGAAAAGCAGCAACAGGAGATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGATTCGGTTGTAGCCACTaGTGTCAAACATTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRFGCSH*CQTLLR Trigger: TCTCAGCAATGTTTGACAGCAGTGGCTACAACCGAA...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTTTTCGGATCAGACACTaGATCATCTGCTGGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVKVDQNYQQPGLHLVTAFRIRH*IICWTF Trigger: GAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAA...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCCTGAACAAACTCTTCTaGGCCAATGTAATTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSLNKLF*ANVIES Trigger: AGACTCAATTACATTGGCCCAGAAGAGTTTGTTCAG...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAATTCTCAAAGTTGACATaGCCATTTGGAAGACGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKFSKLT*PFGRRL Trigger: CAACCGTCTTCCAAATGGCCATGTCAACTTTGAGAA...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCAAAATTTCTCAAAGTTaGCATGGCCATTTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSKISQS*HGHLED Trigger: GTCTTCCAAATGGCCATGTCAACTTTGAGAAATTTT...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTGCAATTTTTCTCATCTaGTTCTTATCGCCGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DVKVDQNYQQPGLHLVTAAIFLI*FLSPSP Trigger: AGGGGACGGCGATAAGAACCAGATGAGAAAAATTGC...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAAGTTGTAGAAATTGCTaGATGGATCCATCTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKSCRNC*MDPSDA Trigger: AGCATCAGATGGATCCATCCAGCAATTTCTACAACT...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGATTCTCAAAGTTGACATaGCCATTTGGAAGACGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRFSKLT*PFGRRL Trigger: CAACCGTCTTCCAAATGGCCATGTCAACTTTGAGAA...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCCATACCAGAGATGATTaGCATCAAAGAATTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSHTRDD*HQRIEV Trigger: AACTTCAATTCTTTGATGGCAATCATCTCTGGTATG...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAATGTAGTTGTAGAAATTaGTGGATGGATCCATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILPQVSSVTISVSKCSCRN*WMDPSD Trigger: ATCAGATGGATCCATCCAGCAATTTCTACAACTACA...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAAGTTGTAGAAATTGCTaGATGGATCCATCTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRSCRNC*MDPSDA Trigger: AGCATCAGATGGATCCATCCAGCAATTTCTACAACT...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CCA 90 bp | ATATATCTCCTGTTGCTGCTTTTCACTAATAATTTGACTCCTCGACTTAGCTTATGGTATTTTGCCTCCTaGCTTCTCAATGAGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYLLLLLFTNNLTPRLSLWYFAS*LLNERV Trigger: AACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCA...TAAGCTAAGTCGAGGAGTCAAATTATTAGTGAAAAGCAGCAACAGGAGATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGTATTGCTGAGAGAACCATGGTTTCTTCTTTTTCTCCCGTCTTGTTGCAGGGCAGATATATTTaGGGTCTTGGTTGGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKCIAERTMVSSFSPVLLQGRYI*GLGWYF Trigger: AAAATACCAACCAAGACCCCAAATATATCTGCCCTG...CAACAAGACGGGAGAAAAAGAAGAAACCATGGTTCTCTCAGCAATACATTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | AACAGGAATGTCATTGATAGGACAGGCCTTGTCAATTaGAAAACTCTTGTGAGCAAATTCAGAGTTCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: NRNVIDRTGLVN*KTLVSKFRVLL Trigger: CAATAGAACTCTGAATTTGCTCACAAGAGTTTTCAAATTGACAAGGCCTGTCCTATCAATGACATTCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| 3UTR CAA 72 bp | AATTTGAAAACTCTTGTGAGCAAATTCAGAGTTCTATaGAACTATGTGTGGCATCTGCTATGTAACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLKTLVSKFRVL*NYVWHLLCNRK Trigger: TTTCCTGTTACATAGCAGATGCCACACATAGTTCAATAGAACTCTGAATTTGCTCACAAGAGTTTTCAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGAGCAGTCAGGGACCTTaGCGCTGCCCCTCGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PENKGQPLQGPLMQQWQQSSQGP*RCPSES Trigger: GCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCT...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS GCA 90 bp | CAACTTGGGAATAGCTTTTGCACTCCAGCACGGGAGAGGCGCCCTTaGTCGGCAGCGTGCAGCCCAGGAGCGCCGCGAGAAACTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLGNSFCTPARERRP*SAACSPGAPRETLP Trigger: TGGCAAAGTTTCTCGCGGCGCTCCTGGGCTGCACGCTGCCGAGCAAGGGCGCCTCTCCCGTGCTGGAGTGCAAAAGCTATTCCCAAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
||
| CDS-3UTR CAA 90 bp | TCTACAGCTGGGCTTGCTTGCAGGGTCTGGGAGGCAGTCCCTAGTACTGGATGCAGCAGTCAGGGACCTTaGCGCTGCCCCTCGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: STAGLACRVWEAVPSTGCSSQGP*RCPSES Trigger: GCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCT...GCATCCAGTACTAGGGACTGCCTCCCAGACCCTGCAAGCAAGCCCAGCTGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCATGTATGGACTGGGGCTaGGTCTTCAGAACCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPPGSSDAAVAAAAATACMDWG*VFRTVS Trigger: GCTCACGGTTCTGAAGACCAAGCCCCAGTCCATACA...TGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS GCA 90 bp | TGGACGTTCTTCCGGTACGTCTGCTCCTCGCCACTGGCCATCCTGTaGGCCAGGTCCTTGAGGTTCCTCATCATTCTCTCGTCCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WTFFRYVCSSPLAIL*ARSLRFLIILSSRK Trigger: CTTCCGGGACGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGCAGACGTACCGGAAGAACGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS GCA 90 bp | TGCTGGACGTTCTTCCGGTACGTCTCCTCGCCACTGGCCATCCTGTaGGCCAGGTCCTTGAGGTTCCTCATCATTCTCTCGTCCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CWTFFRYVSSPLAIL*ARSLRFLIILSSRK Trigger: CTTCCGGGACGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGACGTACCGGAAGAACGTCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
||
| CDS CCA 90 bp | TGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTGCTaGACGTTCTTCCGGTACGTCTGCTCCTCGCCACTGGCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLRAASFRIRHCIIC*TFFRYVCSSPLAIL Trigger: CAGGATGGCCAGTGGCGAGGAGCAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS CCA 90 bp | TGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTGCTaGACGTTCTTCCGGTACGTCTCCTCGCCACTGGCCATCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLRAASFRIRHCIIC*TFFRYVSSPLAILC Trigger: GCACAGGATGGCCAGTGGCGAGGAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
||
| CDS GCA 90 bp | TACTGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTaGTGGACGTTCTTCCGGTACGTCTGCTCCTCGCCACTGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: YWLRAASFRIRHCII*WTFFRYVCSSPLAI Trigger: GATGGCCAGTGGCGAGGAGCAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS GCA 90 bp | TACTGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTaGTGGACGTTCTTCCGGTACGTCTCCTCGCCACTGGCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YWLRAASFRIRHCII*WTFFRYVSSPLAIL Trigger: CAGGATGGCCAGTGGCGAGGAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
||
| CDS CCA 90 bp | CGGTCCGTGGCTGTGGAGCTGAGTTTGGCCAGGACTTCCTCATACTaGCTGAGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSVAVELSLARTSSY*LRAASFRIRHCIIC Trigger: GCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTATGAGGAAGTCCTGGCCAAACTCAGCTCCACAGCCACGGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS-3UTR CAA 90 bp | GCGCTGGTCCCGAGTCGCCTGGGACAGCTTCCTTTGGTGGTTGAGGGGCCATCCAGAAGCAGTCTTACTTaGCCTCCTGGCTTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ALVPSRLGQLPLVVEGPSRSSLT*PPGFSM Trigger: CATTGAGAAGCCAGGAGGCAAAGTAAGACTGCTTCT...GGATGGCCCCTCAACCACCAAAGGAAGCTGTCCCAGGCGACTCGGGACCAGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS TCA 90 bp | GAACCATCACAAACCAGTTCCAATGACCAAGCAGCCATAGCTGGATaGGATGAAGTGACCTCCAGCACGGGAGAGGCGCCCTTGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPSQTSSNDQAAIAG*DEVTSSTGEAPLLG Trigger: GCCGAGCAAGGGCGCCTCTCCCGTGCTGGAGGTCACTTCATCTCATCCAGCTATGGCTGCTTGGTCATTGGAACTGGTTTGTGATGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
||
| CDS GCA 90 bp | ACTTCCTCATACTGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTaGATCATCTGCTGGACGTTCTTCCGGTACGTCTGCTCCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSSYWLRAASFRIRH*IICWTFFRYVCSSP Trigger: TGGCGAGGAGCAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTATGAGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
||
| CDS GCA 90 bp | ACTTCCTCATACTGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTaGATCATCTGCTGGACGTTCTTCCGGTACGTCTCCTCGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TSSYWLRAASFRIRH*IICWTFFRYVSSPL Trigger: CAGTGGCGAGGAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTATGAGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
||
| CDS TCA 90 bp | GCTGCAGTACACGGGCTTCCATTGCTGCTCCTTACTGTAGTCGGATaGGGACTTCTCACCAGCCAGTGTGCTAAAGATGGTGCCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAVHGLPLLLLTVVG*GLLTSQCAKDGALQ Trigger: CTGGAGGGCACCATCTTTAGCACACTGGCTGGTGAGAAGTCCTCATCCGACTACAGTAAGGAGCAGCAATGGAAGCCCGTGTACTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146396.8 ENSMUST00000161516.2 |
||
| CDS TCA 90 bp | CAACAAGACACAGAAGCAGTCTTACTTTGCCTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACATGGCAGCGAGGCTGCAGTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: QQDTEAVLLCLLASQ*EGWKGTWQRGCSTR Trigger: CCGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAGTAAGACTGCTTCTGTGTCTTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
||
| CDS GCA 90 bp | TTTCTCATCTGGTTCTTATCGCCGTCCCCTTCACTCAGTCGCTGGTaGTCAACACACAGGTGGCAAACCTTAGCCATGAGCTCGTACGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLIWFLSPSPSLSRW*STHRWQTLAMSSYG Trigger: TCCGTACGAGCTCATGGCTAAGGTTTGCCACCTGTGTGTTGAGCACCAGCGACTGAGTGAAGGGGACGGCGATAAGAACCAGATGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS GCA 90 bp | CACAATCTTCTCTCTGCTACTGTGAGCAGTCAGGGACCTTTGCGCTaGCCCTCGGAGAGCCGTTCTGTAGTTGTAGAAATTGCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: HNLLSATVSSQGPLR*PSESRSVVVEIAGW Trigger: CCATCCAGCAATTTCTACAACTACAGAACGGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAAGATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS CCA 90 bp | TTATCGCCGTCCCCTTCACTCAGTCGCTGGTGCTCAACACACAGGTaGCAAACCTTAGCCATGAGCTCGTACGGATGCATGAATAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSPSPSLSRWCSTHR*QTLAMSSYGCMNNR Trigger: TCGGTTATTCATGCATCCGTACGAGCTCATGGCTAAGGTTTGCCACCTGTGTGTTGAGCACCAGCGACTGAGTGAAGGGGACGGCGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
||
| CDS CCA 90 bp | GGGCAGGGCAGATATATTTGGGGTCTTGGTTGGTATTTTGCCTCCTaGCTTCTCAATGAGAGGGTTGGAAAGGCACATGGCAGCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQGRYIWGLGWYFAS*LLNERVGKAHGSEA Trigger: AGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAACCAAGACCCCAAATATATCTGCCCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS-3UTR CAA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGTTGAAGTTTCCAATGTaGAAACACTCTCGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PENKGQPLQGPLMQQWQQLKFPM*KHSRAT Trigger: TGTGGCTCGAGAGTGTTTCAACATTGGAAACTTCAA...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGTTTGCAGTCTTCACTTaGGCCCAGGTTTTCTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PENKGQPLQGPLMQQWQQFAVFT*AQVFLS Trigger: ACTTAAGAAAACCTGGGCCAAAGTGAAGACTGCAAA...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGATGAATCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGCCATTTGGAAGACGGTaGACACAGCCCTCGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QKMNHAQSRGFQKILPQVPFGRR*TQPSLR Trigger: CCTCAACGAGGGCTGTGTCAACCGTCTTCCAAATGG...CACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGATTCATCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAGCAGCAACAGCAGCAGCAAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTC | + |
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Preference number: 5 (lower is better) Translates to: PPGSSDAAVAAAAATAAANSLTC*ASSQNF Trigger: GAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATT...TGCTGCTGCTGTTGCTGCTGCTGCTGCCACTGCTGCATCAGAGGACCCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS TCA 90 bp | GCTGCAGTACACGGGCTTCCATTGCTGCTCCTTACTGTAGTCGGATaGGGACTTCTCACCAGCCAGTGTGCTAAAGATGGTGCCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AAVHGLPLLLLTVVG*GLLTSQCAKDGASF Trigger: AAAACTGGCACCATCTTTAGCACACTGGCTGGTGAGAAGTCCTCATCCGACTACAGTAAGGAGCAGCAATGGAAGCCCGTGTACTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAAGCAGTCAGGGACCTTaGCGCTGCCCCTCGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GFQKILPQVSSVTISVSKSSQGP*RCPSES Trigger: GCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCT...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PENKGQPLQGPLMQQWQQNSLTC*ASSQNF Trigger: GAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATT...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTGCTAGCCAGCAGCCAACTCAAAGCCTTGGAGGAAGAGGGGGACGGGGGCATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EFASQQPTQSLGGRGGRGHKFTH*FGQFPK Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...CCCCCGTCCCCCTCTTCCTCCAAGGCTTTGAGTTGGCTGCTGGCTAGCAAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS TCA 90 bp | ATTAAGAGACTGAAGAATGGTATCACAATCTTCTCTCTGCTACTGTaGGCAGTCAGGGACCTTTGCGCTGCCCCTCGGAGAGCCGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKRLKNGITIFSLLL*AVRDLCAAPRRAVL Trigger: CAGAACGGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAAGATTGTGATACCATTCTTCAGTCTCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS TCA 90 bp | ATATATTTGGGGTCTTGGTTGGTATTTTGCCTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACATGGCAGCGAGGCTGCAGTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: IYLGSWLVFCLLASQ*EGWKGTWQRGCSTR Trigger: CCGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAACCAAGACCCCAAATATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS GCA 90 bp | AAGGAGGTTGTTGTCATGGTAGTACAAGCCTCCACAGCTGTCCTCTaGGGACTGGTAGAGGTTTCGGTTGTAGCCACTGCTGTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: KEVVVMVVQASTAVL*GLVEVSVVATAVKH Trigger: ATGTTTGACAGCAGTGGCTACAACCGAAACCTCTACCAGTCCGCAGAGGACAGCTGTGGAGGCTTGTACTACCATGACAACAACCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CCAGAAAACAAAGGCCAGCCCCTCCAGGGTCCTCTGATGCAGCAGTGGCAGCAGCAAAATTTCTCAAAGTaGACATGGCCATTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PENKGQPLQGPLMQQWQQQNFSK*TWPFGR Trigger: TCTTCCAAATGGCCATGTCAACTTTGAGAAATTTTG...CTGCTGCCACTGCTGCATCAGAGGACCCTGGAGGGGCTGGCCTTTGTTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CCA 90 bp | GGCAAAGTGGGTGGTCTCAGAAGTGGCAGTCTGCACAAAGCTACGTaGAAGGATGAAGGTCTTCAAAGGATGGATAAAAATGTCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKVGGLRSGSLHKAT*KDEGLQRMDKNVQG Trigger: CCCCTGGACATTTTTATCCATCCTTTGAAGACCTTCATCCTTCCACGTAGCTTTGTGCAGACTGCCACTTCTGAGACCACCCACTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS-3UTR CAA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTCTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLGFHRAALCVSSISSKCLCARS*RFLIIL Trigger: GAGAATGATGAGGAACCTCAAGGACCTGGCGCACAG...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTTGTATGGACTGGGGCTaGGTCTTCAGAACCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLGFHRAALCVSSISSKCCMDWG*VFRTVS Trigger: GCTCACGGTTCTGAAGACCAAGCCCCAGTCCATACA...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTCCATTTGGAAGACGGTaGACACAGCCCTCGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLGFHRAALCVSSISSKCPFGRR*TQPSLR Trigger: CCTCAACGAGGGCTGTGTCAACCGTCTTCCAAATGG...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGACACACACACACAGAGAGATCATGTCATTGAACCCAGAATGGCCGTACTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PKTHTHREIMSLNPEWPYFSMRG*ERHMAA Trigger: CGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAA...GTACGGCCATTCTGGGTTCAATGACATGATCTCTCTGTGTGTGTGTGTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| CDS-3UTR CAA 90 bp | GCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTTTGCAGTCTTCACTTaGGCCCAGGTTTTCTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQSRGFQKILPQVSSVTIFAVFT*AQVFLS Trigger: ACTTAAGAAAACCTGGGCCAAAGTGAAGACTGCAAA...AATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAACTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFQKILPQVSSVTISVSKLCARS*RFLIIL Trigger: GAGAATGATGAGGAACCTCAAGGACCTGGCGCACAG...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAACCATTTGGAAGACGGTaGACACAGCCCTCGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFQKILPQVSSVTISVSKPFGRR*TQPSLR Trigger: CCTCAACGAGGGCTGTGTCAACCGTCTTCCAAATGG...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS TCA 90 bp | CCATCTGTCCTTCTCTATATTATTTTCGGGTCCTTCACTCTCGTATaGAGCCAAGTAGAGCGCATCTTCACTGAATACAGGCACGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVLLYIIFGSFTLV*SQVERIFTEYRHGE Trigger: CTCTCCGTGCCTGTATTCAGTGAAGATGCGCTCTACTTGGCTTCATACGAGAGTGAAGGACCCGAAAATAATATAGAGAAGGACAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | TCATGCGCAGAGCCGGGGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACCAAAATTTCTCAAAGTaGACATGGCCATTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCAEPGLSEDSPSSVFSDQNFSK*TWPFGR Trigger: TCTTCCAAATGGCCATGTCAACTTTGAGAAATTTTG...GTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCCCCGGCTCTGCGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS GCA 90 bp | GCTGTAGCAACTCTTATCGTTGTCCAAAGGATCCTTCTGCACAAATaGCTGAACAAACTCTTCTGGGCCAATGTAATTGAGTCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVATLIVVQRILLHK*LNKLFWANVIESLQ Trigger: CTGGAGAGACTCAATTACATTGGCCCAGAAGAGTTTGTTCAGGCATTTGTGCAGAAGGATCCTTTGGACAACGATAAGAGTTGCTACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTCTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DVKVDQNYQQPGLHLVTALCARS*RFLIIL Trigger: GAGAATGATGAGGAACCTCAAGGACCTGGCGCACAG...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGATTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRFSMRG*ERHMAA Trigger: CGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAA...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
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| CDS TCA 90 bp | TCCCGGAAGTCATACGGAAATGTTTCTGTCCACTCTGTCAAGAGCTaGAGGATTTTAGGTGCAATTTTTCTCATCTGGTTCTTATCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRKSYGNVSVHSVKS*RILGAIFLIWFLSP Trigger: CGGCGATAAGAACCAGATGAGAAAAATTGCACCTAAAATCCTTCAGCTCTTGACAGAGTGGACAGAAACATTTCCGTATGACTTCCGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | AACTTGGGCTTCCATAGAGCCGCACTCTGTGTAAGTTCCATTAGCAGCAAATGTTTGAAGTTTCCAATGTaGAAACACTCTCGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: NLGFHRAALCVSSISSKCLKFPM*KHSRAT Trigger: TGTGGCTCGAGAGTGTTTCAACATTGGAAACTTCAA...ACATTTGCTGCTAATGGAACTTACACAGAGTGCGGCTCTATGGAAGCCCAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GATTCCTCTGTCAGCATTAGAGAACTAAATAGAGAGAAAGGGAGTGATTTCATCTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: DSSVSIRELNREKGSDFIFSMRG*ERHMAA Trigger: CGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAA...GATGAAATCACTCCCTTTCTCTCTATTTAGTTCTCTAATGCTGACAGAGGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS-3UTR CAA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCTTTGCAGTCTTCACTTaGGCCCAGGTTTTCTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSFAVFT*AQVFLS Trigger: ACTTAAGAAAACCTGGGCCAAAGTGAAGACTGCAAA...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCCATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSHKFTH*FGQFPK Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGACAGTTTTCTTTGTGCTaGATTTCAGGCCAACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRQFSLC*ISGQLG Trigger: CCCAAGTTGGCCTGAAATCAAGCACAAAGAAAACTG...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGATGGTGCCAGTTTTCTTaGTGCTTGATTTCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRWCQFS*CLISGQ Trigger: TTGGCCTGAAATCAAGCACAAAGAAAACTGGCACCA...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | CTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAAGATTGAAGTTTCCAATGTaGAAACACTCTCGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSEDSPSSVFSDDFSLKRLKFPM*KHSRAT Trigger: TGTGGCTCGAGAGTGTTTCAACATTGGAAACTTCAA...TCTTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | AGTGTCTTCAGTGACGATTTCAGTCTCAAAAGAGATCCAAGTCCATCTGTCAGCCAAAATTTCTCAAAGTaGACATGGCCATTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVFSDDFSLKRDPSPSVSQNFSK*TWPFGR Trigger: TCTTCCAAATGGCCATGTCAACTTTGAGAAATTTTG...GCTGACAGATGGACTTGGATCTCTTTTGAGACTGAAATCGTCACTGAAGACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCAGAAGATTCTCCCTCAAGTGTCTTCAGTGACGATTTCAGTCTCAAAACATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GFQKILPQVSSVTISVSKHKFTH*FGQFPK Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...TTTTGAGACTGAAATCGTCACTGAAGACACTTGAGGGAGAATCTTCTGAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS-3UTR CAA 90 bp | GATGTTAAAGTTGATCAGAATTATCAGCAACCTGGTTTGCATTTGGTCACTGCTAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: DVKVDQNYQQPGLHLVTANSLTC*ASSQNF Trigger: GAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATT...AGCAGTGACCAAATGCAAACCAGGTTGCTGATAATTCTGATCAACTTTAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | GCCAGTGTGCTAAAGATGGTGCCCTCCAGCACGGGAGAGGCGCCCTaGCTCGGCAGCGTGCAGCCCAGGAGCGCCGCGAGAAACTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASVLKMVPSSTGEAP*LGSVQPRSAARNFA Trigger: GGCAAAGTTTCTCGCGGCGCTCCTGGGCTGCACGCTGCCGAGCAAGGGCGCCTCTCCCGTGCTGGAGGGCACCATCTTTAGCACACTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146396.8 ENSMUST00000161516.2 |
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| CDS CAA 90 bp | GGGTCGCTGCAGACGGTCATGATGTCCCGCTGTATGGACTGGGGCTaGGTCTTCAGAACCGTGAGCCGGTCCGTGGCTGTGGAGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLQTVMMSRCMDWG*VFRTVSRSVAVELS Trigger: ACTCAGCTCCACAGCCACGGACCGGCTCACGGTTCTGAAGACCAAGCCCCAGTCCATACAGCGGGACATCATGACCGTCTGCAGCGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CCA 72 bp | TCGCTGCAGACGGTCATGATGTCCCGCTGTATGGACTaGGGCTTGGTCTTCAGAACCGTGAGCCGGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLQTVMMSRCMD*GLVFRTVSRSV Trigger: CACGGACCGGCTCACGGTTCTGAAGACCAAGCCCCAGTCCATACAGCGGGACATCATGACCGTCTGCAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | TTGGTCTTCAGAACCGTGAGCCGGTCCGTGGCTGTGGAGCTGAGTTaGGCCAGGACTTCCTCATACTGGCTGAGGGCGGCGAGTTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LVFRTVSRSVAVELS*ARTSSYWLRAASFR Trigger: CCGAAAACTCGCCGCCCTCAGCCAGTATGAGGAAGTCCTGGCCAAACTCAGCTCCACAGCCACGGACCGGCTCACGGTTCTGAAGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CCA 72 bp | GCGGCGAGTTTTCGGATCAGACACTGCATCATCTGCTaGACGTTCTTCCGGTACGTCTCCTCGCCACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AASFRIRHCIIC*TFFRYVSSPLA Trigger: GGCCAGTGGCGAGGAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
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| CDS CAA 72 bp | TGCTCCTCGCCACTGGCCATCCTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTCTCGTCCCGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSPLAILCARS*RFLIILSSRKS Trigger: TGACTTCCGGGACGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
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| CDS CAA 72 bp | GTCTCCTCGCCACTGGCCATCCTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTCTCGTCCCGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSSPLAILCARS*RFLIILSSRKS Trigger: TGACTTCCGGGACGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
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| CDS CAA 90 bp | CGGTACGTCTGCTCCTCGCCACTGGCCATCCTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTCTCGTCCCGGAAGTCATACGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RYVCSSPLAILCARS*RFLIILSSRKSYGN Trigger: ATTTCCGTATGACTTCCGGGACGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGCAGACGTACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | AGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTaGTGGACGTTCTTCCGGTACGTCTGCTCCTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RAASFRIRHCII*WTFFRYVCSSP Trigger: TGGCGAGGAGCAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | TTCTTCCGGTACGTCTCCTCGCCACTGGCCATCCTGTaGGCCAGGTCCTTGAGGTTCCTCATCATTCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: FFRYVSSPLAIL*ARSLRFLIILS Trigger: CGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGACGTACCGGAAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
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| CDS GCA 72 bp | AGGGCGGCGAGTTTTCGGATCAGACACTGCATCATCTaGTGGACGTTCTTCCGGTACGTCTCCTCGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RAASFRIRHCII*WTFFRYVSSPL Trigger: CAGTGGCGAGGAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
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| CDS CCA 72 bp | GCGGCGAGTTTTCGGATCAGACACTGCATCATCTGCTaGACGTTCTTCCGGTACGTCTGCTCCTCGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AASFRIRHCIIC*TFFRYVCSSPL Trigger: CAGTGGCGAGGAGCAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
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| CDS CCA 72 bp | GCTGTGGAGCTGAGTTTGGCCAGGACTTCCTCATACTaGCTGAGGGCGGCGAGTTTTCGGATCAGACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVELSLARTSSY*LRAASFRIRHC Trigger: GCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTATGAGGAAGTCCTGGCCAAACTCAGCTCCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | TTCCGGTACGTCTCCTCGCCACTGGCCATCCTGTGCGCCAGGTCCTaGAGGTTCCTCATCATTCTCTCGTCCCGGAAGTCATACGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FRYVSSPLAILCARS*RFLIILSSRKSYGN Trigger: ATTTCCGTATGACTTCCGGGACGAGAGAATGATGAGGAACCTCAAGGACCTGGCGCACAGGATGGCCAGTGGCGAGGAGACGTACCGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
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| CDS TCA 72 bp | CAAACCAGTTCCAATGACCAAGCAGCCATAGCTGGATaGGATGAAGTGACCTCCAGCACGGGAGAGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QTSSNDQAAIAG*DEVTSSTGEAP Trigger: GGGCGCCTCTCCCGTGCTGGAGGTCACTTCATCTCATCCAGCTATGGCTGCTTGGTCATTGGAACTGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161148.2 |
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| CDS GCA 72 bp | TACTGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTaGATCATCTGCTGGACGTTCTTCCGGTACGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YWLRAASFRIRH*IICWTFFRYVC Trigger: GCAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031276.15 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | TACTGGCTGAGGGCGGCGAGTTTTCGGATCAGACACTaGATCATCTGCTGGACGTTCTTCCGGTACGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: YWLRAASFRIRH*IICWTFFRYVS Trigger: GGAGACGTACCGGAAGAACGTCCAGCAGATGATGCAGTGTCTGATCCGAAAACTCGCCGCCCTCAGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166484.2 ENSMUST00000168092.8 |
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| CDS CAA 90 bp | GGGGTCTTGGTTGGTATTTTGCCTCCTGGCTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCGAGGCTGCAGTACACGGGCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GVLVGILPPGFSMRG*ERHMAARLQYTGFH Trigger: ATGGAAGCCCGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAACCAAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS TCA 72 bp | GGGTCTTGGTTGGTATTTTGCCTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACATGGCAGCGAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSWLVFCLLASQ*EGWKGTWQRGC Trigger: GCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAACCAAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS GCA 72 bp | TGGTTCTTATCGCCGTCCCCTTCACTCAGTCGCTGGTaGTCAACACACAGGTGGCAAACCTTAGCCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WFLSPSPSLSRW*STHRWQTLAMS Trigger: GCTCATGGCTAAGGTTTGCCACCTGTGTGTTGAGCACCAGCGACTGAGTGAAGGGGACGGCGATAAGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | CACAGAAGCAGTCTTACTTTGCCTCCTGGCTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCGAGGCTGCAGTACACGGGCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HRSSLTLPPGFSMRG*ERHMAARLQYTGFH Trigger: ATGGAAGCCCGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAGTAAGACTGCTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| CDS TCA 72 bp | ACAGAAGCAGTCTTACTTTGCCTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACATGGCAGCGAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TEAVLLCLLASQ*EGWKGTWQRGC Trigger: GCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAGTAAGACTGCTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| CDS TCA 72 bp | TCTGAGGCATACTTTCTTTGCCTCCTGGCTTCTCAATaGGAGGGTTGGAAAGGCACATGGCAGCGAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEAYFLCLLASQ*EGWKGTWQRGC Trigger: GCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAGAAAGTATGCCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
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| CDS GCA 72 bp | GTTGTCATGGTAGTACAAGCCTCCACAGCTGTCCTCTaGGGACTGGTAGAGGTTTCGGTTGTAGCCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VVMVVQASTAVL*GLVEVSVVATA Trigger: AGCAGTGGCTACAACCGAAACCTCTACCAGTCCGCAGAGGACAGCTGTGGAGGCTTGTACTACCATGACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CCA 72 bp | ATCTGGTTCTTATCGCCGTCCCCTTCACTCAGTCGCTaGTGCTCAACACACAGGTGGCAAACCTTAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: IWFLSPSPSLSR*CSTHRWQTLAM Trigger: CATGGCTAAGGTTTGCCACCTGTGTGTTGAGCACCAGCGACTGAGTGAAGGGGACGGCGATAAGAACCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 72 bp | AATCTTCTCTCTGCTACTGTGAGCAGTCAGGGACCTTaGCGCTGCCCCTCGGAGAGCCGTTCTGTAGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: NLLSATVSSQGP*RCPSESRSVVV Trigger: TACAACTACAGAACGGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 72 bp | GTTGGTATTTTGCCTCCTGGCTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCGAGGCTGCAGTACACG | + |
|
Preference number: 6 (lower is better) Translates to: VGILPPGFSMRG*ERHMAARLQYT Trigger: CGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS CAA 72 bp | AGTCTTACTTTGCCTCCTGGCTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCGAGGCTGCAGTACACG | + |
|
Preference number: 6 (lower is better) Translates to: SLTLPPGFSMRG*ERHMAARLQYT Trigger: CGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAGTAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161516.2 |
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| CDS CAA 72 bp | ATACTTTCTTTGCCTCCTGGCTTCTCAATGAGAGGGTaGGAAAGGCACATGGCAGCGAGGCTGCAGTACACG | + |
|
Preference number: 6 (lower is better) Translates to: ILSLPPGFSMRG*ERHMAARLQYT Trigger: CGTGTACTGCAGCCTCGCTGCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAGAAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209346.2 |
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| CDS CAA 90 bp | TGGTATCACAATCTTCTCTCTGCTACTGTGAGCAGTCAGGGACCTTaGCGCTGCCCCTCGGAGAGCCGTTCTGTAGTTGTAGAAATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WYHNLLSATVSSQGP*RCPSESRSVVVEIA Trigger: AGCAATTTCTACAACTACAGAACGGCTCTCCGAGGGGCAGCGCAAAGGTCCCTGACTGCTCACAGTAGCAGAGAGAAGATTGTGATACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | AGACAGGCAAAGTGGGTGGTCTCAGAAGTGGCAGTCTaGACAAAGCTACGTGGAAGGATGAAGGTCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RQAKWVVSEVAV*TKLRGRMKVFK Trigger: TTTGAAGACCTTCATCCTTCCACGTAGCTTTGTGCAGACTGCCACTTCTGAGACCACCCACTTTGCCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS CAA 72 bp | GGCAGGGCAGATATATTTGGGGTCTTGGTTGGTATTTaGCCTCCTGGCTTCTCAATGAGAGGGTTGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRADIFGVLVGI*PPGFSMRGLER Trigger: CCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAACCAAGACCCCAAATATATCTGCCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS TCA 72 bp | CACTCTCGTATGAAGCCAAGTAGAGCGCATCTTCACTaGATACAGGCACGGAGAGCAGGTATTGTAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: HSRMKPSRAHLH*IQARRAGIVRP Trigger: AGGTCTTACAATACCTGCTCTCCGTGCCTGTATTCAGTGAAGATGCGCTCTACTTGGCTTCATACGAGAGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | CTGCCCCTCGGAGAGCCGTTCTGTAGTTGTAGAAATTaGTGGATGGATCCATCTGATGCTCAAGAATGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LPLGEPFCSCRN*WMDPSDAQECQ Trigger: TTGACATTCTTGAGCATCAGATGGATCCATCCAGCAATTTCTACAACTACAGAACGGCTCTCCGAGGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CCA 72 bp | CCCCTCGGAGAGCCGTTCTGTAGTTGTAGAAATTGCTaGATGGATCCATCTGATGCTCAAGAATGTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: PLGEPFCSCRNC*MDPSDAQECQT Trigger: AGTTTGACATTCTTGAGCATCAGATGGATCCATCCAGCAATTTCTACAACTACAGAACGGCTCTCCGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CCA 72 bp | AGATATATTTGGGGTCTTGGTTGGTATTTTGCCTCCTaGCTTCTCAATGAGAGGGTTGGAAAGGCACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RYIWGLGWYFAS*LLNERVGKAHG Trigger: GCCATGTGCCTTTCCAACCCTCTCATTGAGAAGCCAGGAGGCAAAATACCAACCAAGACCCCAAATATATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS CAA 72 bp | CCTATCAGGATAGTAATCCACATTGGGTACCAAGTGTaGGATAAGGGCTTCCAGAGACCCAGAAAGGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PIRIVIHIGYQV*DKGFQRPRKEV Trigger: AACCTCCTTTCTGGGTCTCTGGAAGCCCTTATCCAACACTTGGTACCCAATGTGGATTACTATCCTGATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | GATGTATGTCCTATCAGGATAGTAATCCACATTGGGTACCAAGTGTaGGATAAGGGCTTCCAGAGACCCAGAAAGGAGGTTGTTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: DVCPIRIVIHIGYQV*DKGFQRPRKEVVVM Trigger: CATGACAACAACCTCCTTTCTGGGTCTCTGGAAGCCCTTATCCAACACTTGGTACCCAATGTGGATTACTATCCTGATAGGACATACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | TCTCATCTGGTTATCAGGATAGTAATCCACATTGGGTACCAAGTGTaGGATAAGGGCTTCCAGAGACCCAGAAAGGAGGTTGTTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SHLVIRIVIHIGYQV*DKGFQRPRKEVVVM Trigger: CATGACAACAACCTCCTTTCTGGGTCTCTGGAAGCCCTTATCCAACACTTGGTACCCAATGTGGATTACTATCCTGATAACCAGATGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166484.2 |
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| CDS CCA 72 bp | GGTGGTCTCAGAAGTGGCAGTCTGCACAAAGCTACGTaGAAGGATGAAGGTCTTCAAAGGATGGATAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GGLRSGSLHKAT*KDEGLQRMDKN Trigger: ATTTTTATCCATCCTTTGAAGACCTTCATCCTTCCACGTAGCTTTGTGCAGACTGCCACTTCTGAGACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146396.8 |
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| CDS CAA 72 bp | GTTATCAGGATAGTAATCCACATTGGGTACCAAGTGTaGGATAAGGGCTTCCAGAGACCCAGAAAGGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VIRIVIHIGYQV*DKGFQRPRKEV Trigger: AACCTCCTTTCTGGGTCTCTGGAAGCCCTTATCCAACACTTGGTACCCAATGTGGATTACTATCCTGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166484.2 |
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| CDS TCA 72 bp | CTTCTCTATATTATTTTCGGGTCCTTCACTCTCGTATaGAGCCAAGTAGAGCGCATCTTCACTGAATACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLYIIFGSFTLV*SQVERIFTEYR Trigger: CCTGTATTCAGTGAAGATGCGCTCTACTTGGCTTCATACGAGAGTGAAGGACCCGAAAATAATATAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | ACTCTTATCGTTGTCCAAAGGATCCTTCTGCACAAATaGCTGAACAAACTCTTCTGGGCCAATGTAATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLIVVQRILLHK*LNKLFWANVIE Trigger: CTCAATTACATTGGCCCAGAAGAGTTTGTTCAGGCATTTGTGCAGAAGGATCCTTTGGACAACGATAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | GAGACCGGGCTCATATTCATACCAGAGATGATTGCCATCAAAGAATaGAAGTTTCCAATGTTGAAACACTCTCGAGCCACATCGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ETGLIFIPEMIAIKE*KFPMLKHSRATSMK Trigger: TTTCATCGATGTGGCTCGAGAGTGTTTCAACATTGGAAACTTCAATTCTTTGATGGCAATCATCTCTGGTATGAATATGAGCCCGGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 90 bp | TTCATACCAGAGATGATTGCCATCAAAGAATTGAAGTTTCCAATGTaGAAACACTCTCGAGCCACATCGATGAAATACTCGATCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FIPEMIAIKELKFPM*KHSRATSMKYSIIL Trigger: GAGGATGATCGAGTATTTCATCGATGTGGCTCGAGAGTGTTTCAACATTGGAAACTTCAATTCTTTGATGGCAATCATCTCTGGTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS TCA 72 bp | TCATACGGAAATGTTTCTGTCCACTCTGTCAAGAGCTaGAGGATTTTAGGTGCAATTTTTCTCATCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SYGNVSVHSVKS*RILGAIFLIWF Trigger: GAACCAGATGAGAAAAATTGCACCTAAAATCCTTCAGCTCTTGACAGAGTGGACAGAAACATTTCCGTATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031276.15 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS GCA 72 bp | TCTCGAGACCGGGCTCATATTCATACCAGAGATGATTaGCATCAAAGAATTGAAGTTTCCAATGTTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SRDRAHIHTRDD*HQRIEVSNVET Trigger: TGTTTCAACATTGGAAACTTCAATTCTTTGATGGCAATCATCTCTGGTATGAATATGAGCCCGGTCTCGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS CAA 72 bp | TCCACCTGTTTCCATGTCATAAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTCTCAAAGTTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: STCFHVINSLTC*ASSQNFSKLTW Trigger: CCATGTCAACTTTGAGAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATGACATGGAAACAGGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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| CDS TCA 72 bp | TCATACGGAAATGTTTCTGTCCACTCTGTCAAGAGCTaGAGGATTTTAGGTGCAATTTTTCTCATCTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SYGNVSVHSVKS*RILGAIFLIWL Trigger: TAACCAGATGAGAAAAATTGCACCTAAAATCCTTCAGCTCTTGACAGAGTGGACAGAAACATTTCCGTATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166484.2 |
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| CDS CAA 72 bp | CTCATATTCATACCAGAGATGATTGCCATCAAAGAATaGAAGTTTCCAATGTTGAAACACTCTCGAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LIFIPEMIAIKE*KFPMLKHSRAT Trigger: TGTGGCTCGAGAGTGTTTCAACATTGGAAACTTCAATTCTTTGATGGCAATCATCTCTGGTATGAATATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031276.15 ENSMUST00000166484.2 ENSMUST00000168092.8 ENSMUST00000209346.2 |
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