Pregenerated sensors for RASEF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043003Ensembl transcript IDs: ENSMUST00000058292.13, ENSMUST00000102837.3, ENSMUST00000222414.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTAGTGCCAACTCCCTTCTTCCCCCAGCCTCTGGCAGTCACTATGTaGGATACCTGTTGGTGGCATAGTTCTCCCAGTAGTATGTATTAT | + |
Preference number: 1 (lower is better) Translates to: LVPTPFFPQPLAVTM*DTCWWHSSPSSMYY Trigger: ATAATACATACTACTGGGAGAACTATGCCACCAACAGGTATCTCACATAGTGACTGCCAGAGGCTGGGGGAAGAAGGGAGTTGGCACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR TCA 90 bp | TTTTCACTTAATGATTTAAGCCACAGACTTCACAGTGGTCCTTCCTaGCTGTGGACCACTGCACCCTTCCCCCTTCTTAAGATGCTACAG | + |
Preference number: 1 (lower is better) Translates to: FSLNDLSHRLHSGPS*LWTTAPFPLLKMLQ Trigger: CTGTAGCATCTTAAGAAGGGGGAAGGGTGCAGTGGTCCACAGTCAGGAAGGACCACTGTGAAGTCTGTGGCTTAAATCATTAAGTGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR CCA 90 bp | TTTTTGTCGGCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTaGAAGACATTTTGGTCAGAAGGCACTGCAGGTTCCAGGAGAAAA | + |
Preference number: 1 (lower is better) Translates to: FLSAHPESDSEASDS*KTFWSEGTAGSRRK Trigger: TTTTCTCCTGGAACCTGCAGTGCCTTCTGACCAAAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGCCGACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR TCA 90 bp | GGTGAGACTAATAGCAAACTTCTAACTGTGACATATATTACAAAATaGCCACCACCTCAACCTGTGTGCCAATTTCTCTGGCCATTCCTC | + |
Preference number: 1 (lower is better) Translates to: GETNSKLLTVTYITK*PPPQPVCQFLWPFL Trigger: GAGGAATGGCCAGAGAAATTGGCACACAGGTTGAGGTGGTGGTCATTTTGTAATATATGTCACAGTTAGAAGTTTGCTATTAGTCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR TCA 90 bp | ATTCTATGTGTGTGGACATATCATTTGTTCACTAGAACACACATATaGAGGTTAGAGAACCACTTTCAGGAGACAGTTCTGCCCTTCCAC | + |
Preference number: 1 (lower is better) Translates to: ILCVWTYHLFTRTHI*RLENHFQETVLPFH Trigger: GTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTTCTCTAACCTTCATATGTGTGTTCTAGTGAACAAATGATATGTCCACACACATAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCCACAGTGGTCCTTCCTaGCTGTGGACCACTGCACCC | + |
Preference number: 2 (lower is better) Translates to: LLPGRCHETVAILLRRLTHSGPS*LWTTAP Trigger: GGGTGCAGTGGTCCACAGTCAGGAAGGACCACTGTG...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCGCCAGGCAGATGCCATaGGACTGTGGCCATCCTCCT | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLELASARQMP*DCGHPP Trigger: AGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGC...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCCTGGCAGTCACTATGTaGGATACCTGTTGGTGGCAT | + |
Preference number: 2 (lower is better) Translates to: LLPGRCHETVAILLRRLTLAVTM*DTCWWH Trigger: ATGCCACCAACAGGTATCTCACATAGTGACTGCCAG...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCTCTTCCCCCAGCCTCTaGCAGTCACTATGTGAGATA | + |
Preference number: 2 (lower is better) Translates to: LLPGRCHETVAILLRRLTSSPSL*QSLCEI Trigger: TATCTCACATAGTGACTGCCAGAGGCTGGGGGAAGA...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCGAAGCAAGGACTTTGTaGACACAGAACAACTGGGCT | + |
Preference number: 2 (lower is better) Translates to: LLPGRCHETVAILLRRLTEARTL*TQNNWA Trigger: AGCCCAGTTGTTCTGTGTTCACAAAGTCCTTGCTTC...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCCTGGCAGTCACTATGTaGGATACCTGTTGGTGGCAT | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLELASLAVTM*DTCWWH Trigger: ATGCCACCAACAGGTATCTCACATAGTGACTGCCAG...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCCCCAGTGTCATATTATaGACTGCTTCATGGAGAGCC | + |
Preference number: 2 (lower is better) Translates to: LLPGRCHETVAILLRRLTPSVIL*TASWRA Trigger: GGCTCTCCATGAAGCAGTGCATAATATGACACTGGG...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCTCTTCCCCCAGCCTCTaGCAGTCACTATGTGAGATA | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLELASSSPSL*QSLCEI Trigger: TATCTCACATAGTGACTGCCAGAGGCTGGGGGAAGA...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATACACAGTGGTCCTTCCTaGCTGTGGACCACTGCACCC | + |
Preference number: 2 (lower is better) Translates to: NWFRPLETCFCRPILSQIHSGPS*LWTTAP Trigger: GGGTGCAGTGGTCCACAGTCAGGAAGGACCACTGTG...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCCAGGCTAAGCTGAGGTaGCAAATGAAACCATTCATG | + |
Preference number: 2 (lower is better) Translates to: LLPGRCHETVAILLRRLTQAKLR*QMKPFM Trigger: CATGAATGGTTTCATTTGGCACCTCAGCTTAGCCTG...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCTTGGTCAGAAGGCACTaGAGGTTCCAGGAGAAAAAC | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLELASLVRRH*RFQEKN Trigger: GTTTTTCTCCTGGAACCTGCAGTGCCTTCTGACCAA...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCGGGAACATTGTAATGTaGCCTGAACAGGCACCATGT | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLELASGNIVM*PEQAPC Trigger: ACATGGTGCCTGTTCAGGCCACATTACAATGTTCCC...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR CAA 90 bp | TGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCTaGTGCAACAAGTACTTGTACTTCCTGAGACACCTCACTAGCCTA | + |
Preference number: 2 (lower is better) Translates to: CPSTVGSGTNLELAS*CNKYLYFLRHLTSL Trigger: TAGGCTAGTGAGGTGTCTCAGGAAGTACAAGTACTTGTTGCACAAGCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR CAA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTaGGCAAGCTTGTGCAACAAGTACTTGTACTTCCTGAGACACCTC | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLE*ASLCNKYLYFLRHL Trigger: GAGGTGTCTCAGGAAGTACAAGTACTTGTTGCACAAGCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCAAGCCTAGATCTATATaGACCAAGGTATCTGAGTCT | + |
Preference number: 2 (lower is better) Translates to: RQFCPSTVGSGTNLELASKPRSI*TKVSES Trigger: AGACTCAGATACCTTGGTTCATATAGATCTAGGCTT...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTCAGGCTAAGCTGAGGTaGCAAATGAAACCATTCATG | + |
Preference number: 2 (lower is better) Translates to: NHFQETVLPFHCGVRYKSQAKLR*QMKPFM Trigger: CATGAATGGTTTCATTTGGCACCTCAGCTTAGCCTG...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACAATTGGCCAGGCTGTaGTTCCTCAGATCCCAGTGT | + |
Preference number: 2 (lower is better) Translates to: TPGRTSALIIHPWLQRIEQLARL*FLRSQC Trigger: ACACTGGGATCTGAGGAATCACAGCCTGGCCAATTG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | TTGTCGGCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTGGAAGACATTTCCCAGTGTCATATTATaGACTGCTTCATGGAGAGCC | + |
Preference number: 2 (lower is better) Translates to: LSAHPESDSEASDSWKTFPSVIL*TASWRA Trigger: GGCTCTCCATGAAGCAGTGCATAATATGACACTGGG...AAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGCCGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACTTGAAGTTAGGTGCTaGGGGGCTGGCATTATGCTA | + |
Preference number: 2 (lower is better) Translates to: TPGRTSALIIHPWLQRIELEVRC*GAGIML Trigger: TAGCATAATGCCAGCCCCTCAGCACCTAACTTCAAG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTTGGTCCTCTTTTAGATaGAGCACATTCCAAAGCTAT | + |
Preference number: 2 (lower is better) Translates to: NHFQETVLPFHCGVRYKSWSSFR*STFQSY Trigger: ATAGCTTTGGAATGTGCTGCATCTAAAAGAGGACCA...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTTACTTGTTTTCCAGATaGGAACATTGTAATGTGGCC | + |
Preference number: 2 (lower is better) Translates to: NHFQETVLPFHCGVRYKSYLFSR*EHCNVA Trigger: GGCCACATTACAATGTTCCCATCTGGAAAACAAGTA...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGAAGCTTCTGACTCTTaGAAGACATTTTGGTCAGAA | + |
Preference number: 2 (lower is better) Translates to: NHFQETVLPFHCGVRYKSEASDS*KTFWSE Trigger: TTCTGACCAAAATGTCTTCCAAGAGTCAGAAGCTTC...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATACATTGTAATGTGGCCTaGACAGGCACCATGTTATCA | + |
Preference number: 2 (lower is better) Translates to: NWFRPLETCFCRPILSQIHCNVA*TGTMLS Trigger: TGATAACATGGTGCCTGTTCAGGCCACATTACAATG...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTATCCTTTTCAAATACTaGGTTTGGTGGCTTTTAGCA | + |
Preference number: 2 (lower is better) Translates to: NHFQETVLPFHCGVRYKSILFKY*VWWLLA Trigger: TGCTAAAAGCCACCAAACTCAGTATTTGAAAAGGAT...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAATTGGTCAGAAGGCACTaGAGGTTCCAGGAGAAAAAC | + |
Preference number: 2 (lower is better) Translates to: TPGRTSALIIHPWLQRIELVRRH*RFQEKN Trigger: GTTTTTCTCCTGGAACCTGCAGTGCCTTCTGACCAA...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR GCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCTTCAGGAGACAGTTCTaGCCTTCCACTGTGGGGTCA | + |
Preference number: 2 (lower is better) Translates to: PVCQFLWPFLTINVFFLIFRRQF*PSTVGS Trigger: TGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAA...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTCGATTATTTATGTTCTaGGTAAGCTATTCAAAGCCT | + |
Preference number: 2 (lower is better) Translates to: NHFQETVLPFHCGVRYKSRLFMF*VSYSKP Trigger: AGGCTTTGAATAGCTTACCCAGAACATAAATAATCG...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCGAAGCAAGGACTTTGTaGACACAGAACAACTGGGCT | + |
Preference number: 2 (lower is better) Translates to: PVCQFLWPFLTINVFFLIEARTL*TQNNWA Trigger: AGCCCAGTTGTTCTGTGTTCACAAAGTCCTTGCTTC...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | TTGTCGGCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTGGAAGACATTTATCCTTTTCAAATACTaGGTTTGGTGGCTTTTAGCA | + |
Preference number: 2 (lower is better) Translates to: LSAHPESDSEASDSWKTFILFKY*VWWLLA Trigger: TGCTAAAAGCCACCAAACTCAGTATTTGAAAAGGAT...AAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGCCGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCGGTCAGGTACAAATCTaGAGTTGGCAAGCTTGTGCA | + |
Preference number: 2 (lower is better) Translates to: PVCQFLWPFLTINVFFLIGQVQI*SWQACA Trigger: TGCACAAGCTTGCCAACTCCAGATTTGTACCTGACC...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAAGTGTGCCAATTTCTCTaGCCATTCCTCACAATCAAT | + |
Preference number: 2 (lower is better) Translates to: TPGRTSALIIHPWLQRIEVCQFL*PFLTIN Trigger: ATTGATTGTGAGGAATGGCCAGAGAAATTGGCACAC...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR TCA 90 bp | CAAAGTTTTAAAGACTGGTCCTCTTTTAGATGCAGCACATTCCAAAGCTATGCTCATTGTAATGTGGCCTaGACAGGCACCATGTTATCA | + |
Preference number: 2 (lower is better) Translates to: QSFKDWSSFRCSTFQSYAHCNVA*TGTMLS Trigger: TGATAACATGGTGCCTGTTCAGGCCACATTACAATG...AGCATAGCTTTGGAATGTGCTGCATCTAAAAGAGGACCAGTCTTTAAAACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACAAAGTTTTAAAGACTaGTCCTCTTTTAGATGCAGC | + |
Preference number: 2 (lower is better) Translates to: TPGRTSALIIHPWLQRIEQSFKD*SSFRCS Trigger: GCTGCATCTAAAAGAGGACCAGTCTTTAAAACTTTG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CCA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGGAAGCTTCTGACTCTTaGAAGACATTTTGGTCAGAA | + |
Preference number: 2 (lower is better) Translates to: ENKPLPLTSILTLEEEGQEASDS*KTFWSE Trigger: TTCTGACCAAAATGTCTTCCAAGAGTCAGAAGCTTC...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR GCA 72 bp | AGCAAGCTTCAGGTTGCTGAGAGCGGGGAAGAACAGTaGAATTGGCCAGGCTGTGATTCCTCAGATCCCAGT | + |
Preference number: 3 (lower is better) Translates to: SKLQVAESGEEQ*NWPGCDSSDPS Trigger: ACTGGGATCTGAGGAATCACAGCCTGGCCAATTGCACTGTTCTTCCCCGCTCTCAGCAACCTGAAGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR TCA 72 bp | ACTCCCTTCTTCCCCCAGCCTCTGGCAGTCACTATGTaGGATACCTGTTGGTGGCATAGTTCTCCCAGTAGT | + |
Preference number: 3 (lower is better) Translates to: TPFFPQPLAVTM*DTCWWHSSPSS Trigger: ACTACTGGGAGAACTATGCCACCAACAGGTATCTCACATAGTGACTGCCAGAGGCTGGGGGAAGAAGGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR TCA 72 bp | GTGGCTTTTAGCACGACTACTGCCAGGCAGATGCCATaGGACTGTGGCCATCCTCCTAAGAAGGTTGACCAT | + |
Preference number: 3 (lower is better) Translates to: VAFSTTTARQMP*DCGHPPKKVDH Trigger: ATGGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAGTCGTGCTAAAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR CCA 72 bp | GCTTCATGGAGAGCCAGGGTCCCACAGTCAGTAATCTaGAAGCAAGGACTTTGTGAACACAGAACAACTGGG | + |
Preference number: 3 (lower is better) Translates to: ASWRARVPQSVI*KQGLCEHRTTG Trigger: CCCAGTTGTTCTGTGTTCACAAAGTCCTTGCTTCCAGATTACTGACTGTGGGACCCTGGCTCTCCATGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR CCA 72 bp | GAACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTaGGGTCAGGTACAAATCTGGAGTTGGCAAGCTTGT | + |
Preference number: 3 (lower is better) Translates to: EPLSGDSSALPL*GQVQIWSWQAC Trigger: ACAAGCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR-3UTR CAA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCACTAGAAACATGTTTTaGTCGGCCCATCCTGAGTCA | + |
Preference number: 3 (lower is better) Translates to: RQFCPSTVGSGTNLELASTRNMF*SAHPES Trigger: TGACTCAGGATGGGCCGACAAAAACATGTTTCTAGT...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR TCA 72 bp | AATGATTTAAGCCACAGACTTCACAGTGGTCCTTCCTaGCTGTGGACCACTGCACCCTTCCCCCTTCTTAAG | + |
Preference number: 3 (lower is better) Translates to: NDLSHRLHSGPS*LWTTAPFPLLK Trigger: CTTAAGAAGGGGGAAGGGTGCAGTGGTCCACAGTCAGGAAGGACCACTGTGAAGTCTGTGGCTTAAATCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR CCA 72 bp | GCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTaGAAGACATTTTGGTCAGAAGGCACTGCAGGTTCC | + |
Preference number: 3 (lower is better) Translates to: AHPESDSEASDS*KTFWSEGTAGS Trigger: GGAACCTGCAGTGCCTTCTGACCAAAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR GCA 72 bp | CCTGAACAGGCACCATGTTATCAGGCTAAGCTGAGGTaGCAAATGAAACCATTCATGCTACCTTACACCAGC | + |
Preference number: 3 (lower is better) Translates to: PEQAPCYQAKLR*QMKPFMLPYTS Trigger: GCTGGTGTAAGGTAGCATGAATGGTTTCATTTGGCACCTCAGCTTAGCCTGATAACATGGTGCCTGTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR CCA 72 bp | AGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTaGAGTTGGCAAGCTTGTGCAACAAGTACTTGTACT | + |
Preference number: 3 (lower is better) Translates to: SSALPLWGQVQI*SWQACATSTCT Trigger: AGTACAAGTACTTGTTGCACAAGCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR-3UTR CAA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAATCCTCCTAAGAAGGTaGACCATTAGTGCCAACTCC | + |
Preference number: 3 (lower is better) Translates to: NWFRPLETCFCRPILSQIILLRR*TISANS Trigger: GGAGTTGGCACTAATGGTCAACCTTCTTAGGAGGAT...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR TCA 72 bp | AAGGCACTGCAGGTTCCAGGAGAAAAACAAAACCAGTaGGGAGCAGTCACACTAGTAAGGATAGTGTCCTTT | + |
Preference number: 3 (lower is better) Translates to: KALQVPGEKQNQ*GAVTLVRIVSF Trigger: AAAGGACACTATCCTTACTAGTGTGACTGCTCCTCACTGGTTTTGTTTTTCTCCTGGAACCTGCAGTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR-3UTR CAA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTATCCTCCTAAGAAGGTaGACCATTAGTGCCAACTCC | + |
Preference number: 3 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSILLRR*TISANS Trigger: GGAGTTGGCACTAATGGTCAACCTTCTTAGGAGGAT...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR CCA 72 bp | CAACTTACTTGTTTTCCAGATGGGAACATTGTAATGTaGCCTGAACAGGCACCATGTTATCAGGCTAAGCTG | + |
Preference number: 3 (lower is better) Translates to: QLTCFPDGNIVM*PEQAPCYQAKL Trigger: CAGCTTAGCCTGATAACATGGTGCCTGTTCAGGCCACATTACAATGTTCCCATCTGGAAAACAAGTAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR CCA 72 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTaGTTACAGAGAATAGAAGACAAAAGGACTTTGGGG | + |
Preference number: 3 (lower is better) Translates to: TPGRTSALIIHP*LQRIEDKRTLG Trigger: CCCCAAAGTCCTTTTGTCTTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR-3UTR CAA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCCTGGAGTTGGCAAGCTaGTGCAACAAGTACTTGTAC | + |
Preference number: 3 (lower is better) Translates to: PVCQFLWPFLTINVFFLILELAS*CNKYLY Trigger: GTACAAGTACTTGTTGCACAAGCTTGCCAACTCCAG...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR TCA 72 bp | GTGTGGACATATCATTTGTTCACTAGAACACACATATaGAGGTTAGAGAACCACTTTCAGGAGACAGTTCTG | + |
Preference number: 3 (lower is better) Translates to: VWTYHLFTRTHI*RLENHFQETVL Trigger: CAGAACTGTCTCCTGAAAGTGGTTCTCTAACCTTCATATGTGTGTTCTAGTGAACAAATGATATGTCCACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR TCA 72 bp | AATAGCAAACTTCTAACTGTGACATATATTACAAAATaGCCACCACCTCAACCTGTGTGCCAATTTCTCTGG | + |
Preference number: 3 (lower is better) Translates to: NSKLLTVTYITK*PPPQPVCQFLW Trigger: CCAGAGAAATTGGCACACAGGTTGAGGTGGTGGTCATTTTGTAATATATGTCACAGTTAGAAGTTTGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR-3UTR CAA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGGTGTGGACATATCATTaGTTCACTAGAACACACATA | + |
Preference number: 3 (lower is better) Translates to: ENKPLPLTSILTLEEEGQVWTYH*FTRTHI Trigger: TATGTGTGTTCTAGTGAACAAATGATATGTCCACAC...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR TCA 72 bp | ATGTTCTGGGTAAGCTATTCAAAGCCTAGATCTATATaGACCAAGGTATCTGAGTCTCTTACTAAGAATAAT | + |
Preference number: 3 (lower is better) Translates to: MFWVSYSKPRSI*TKVSESLTKNN Trigger: ATTATTCTTAGTAAGAGACTCAGATACCTTGGTTCATATAGATCTAGGCTTTGAATAGCTTACCCAGAACAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCGCTCACTTAGCTGAATaGCCGCCTTGTCCTGGGCTC | + |
Preference number: 4 (lower is better) Translates to: RQFCPSTVGSGTNLELASAHLAE*PPCPGL Trigger: GAGCCCAGGACAAGGCGGCCATTCAGCTAAGTGAGC...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR TCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCTTGGCTCCACAAGGGTaGTGTTCTGGTACAGGGTAC | + |
Preference number: 4 (lower is better) Translates to: LLPGRCHETVAILLRRLTLAPQG*CSGTGY Trigger: GTACCCTGTACCAGAACATCACCCTTGTGGAGCCAA...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
||
CDS-3UTR TCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCCTGTGCTCTGGAGTTTaGTCTCACGGAGAAAGTTCC | + |
Preference number: 4 (lower is better) Translates to: RQFCPSTVGSGTNLELASLCSGV*SHGESS Trigger: GGAACTTTCTCCGTGAGATCAAACTCCAGAGCACAG...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
||
CDS-3UTR TCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCGCTGTATCCCAGAGCTaGAGAACTGTTTGTTCACCA | + |
Preference number: 4 (lower is better) Translates to: LLPGRCHETVAILLRRLTAVSQS*RTVCSP Trigger: TGGTGAACAAACAGTTCTTCAGCTCTGGGATACAGC...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR GCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAGCAGAGCCCTGGGGCTaGCAGTGTAAGACAGAGGCC | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIAEPWG*QCKTEA Trigger: GGCCTCTGTCTTACACTGGCAGCCCCAGGGCTCTGC...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCCTCTCTTCACTGCAATaGCCAGGTTTTCCATCTCTG | + |
Preference number: 4 (lower is better) Translates to: LLPGRCHETVAILLRRLTLSSLQ*PGFPSL Trigger: CAGAGATGGAAAACCTGGCCATTGCAGTGAAGAGAG...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
||
CDS-3UTR GCA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTGCAGAGCCCTGGGGCTaGCAGTGTAAGACAGAGGCC | + |
Preference number: 4 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSAEPWG*QCKTEA Trigger: GGCCTCTGTCTTACACTGGCAGCCCCAGGGCTCTGC...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR GCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCCCATCATTACTGTCATaGAGCTTCCGGTTAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: RQFCPSTVGSGTNLELASPSLLS*SFRLAV Trigger: AACAGCTAACCGGAAGCTGCATGACAGTAATGATGG...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCGTAAGTGTTTTCCAGTaGACTCCTGAGGCCATCATT | + |
Preference number: 4 (lower is better) Translates to: RQFCPSTVGSGTNLELASVSVFQ*TPEAII Trigger: AATGATGGCCTCAGGAGTGCACTGGAAAACACTTAC...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATATCACCAGCAGAGCCCTaGGGCTGCCAGTGTAAGACA | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQISPAEP*GCQCKT Trigger: TGTCTTACACTGGCAGCCCCAGGGCTCTGCTGGTGA...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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3UTR CAA 72 bp | TGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTaGGCAAGCTTGTGCAACAAGTACTTGTACTTCCTG | + |
Preference number: 4 (lower is better) Translates to: CPSTVGSGTNLE*ASLCNKYLYFL Trigger: CAGGAAGTACAAGTACTTGTTGCACAAGCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCGGCTACGTTTGTCTGTaGTTCCAAAAGTTCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: LLPGRCHETVAILLRRLTGYVCL*FQKFFL Trigger: AAGAAAGAACTTTTGGAAGCACAGACAAACGTAGCC...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | AGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCACAAGGGTGATGTTCTaGTACAGGGTACTAACTTGT | + |
Preference number: 4 (lower is better) Translates to: RQFCPSTVGSGTNLELASTRVMF*YRVLTC Trigger: ACAAGTTAGTACCCTGTACCAGAACATCACCCTTGT...GCTTGCCAACTCCAGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
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3UTR CAA 72 bp | ACTGTGGGGTCAGGTACAAATCTGGAGTTGGCAAGCTaGTGCAACAAGTACTTGTACTTCCTGAGACACCTC | + |
Preference number: 4 (lower is better) Translates to: TVGSGTNLELAS*CNKYLYFLRHL Trigger: GAGGTGTCTCAGGAAGTACAAGTACTTGTTGCACAAGCTTGCCAACTCCAGATTTGTACCTGACCCCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR TCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTGTTCTTCATCTGCAGTaGCTTTTTAGAAGTAGACCC | + |
Preference number: 4 (lower is better) Translates to: NHFQETVLPFHCGVRYKSVLHLQ*LFRSRP Trigger: GGGTCTACTTCTAAAAAGTCACTGCAGATGAAGAAC...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCCAACAGTTCTTCATCTaGAGTGACTTTTTAGAAGTA | + |
Preference number: 4 (lower is better) Translates to: LLPGRCHETVAILLRRLTQQFFI*SDFLEV Trigger: TACTTCTAAAAAGTCACTGCAGATGAAGAACTGTTG...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | CAAAGTTTTAAAGACTGGTCCTCTTTTAGATGCAGCACATTCCAAAGCTATGCTGCTCACTTAGCTGAATaGCCGCCTTGTCCTGGGCTC | + |
Preference number: 4 (lower is better) Translates to: QSFKDWSSFRCSTFQSYAAHLAE*PPCPGL Trigger: GAGCCCAGGACAAGGCGGCCATTCAGCTAAGTGAGC...AGCATAGCTTTGGAATGTGCTGCATCTAAAAGAGGACCAGTCTTTAAAACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTTTCCGGTTAGCTGTTTaGAGGATTTCAATTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: NHFQETVLPFHCGVRYKSFRLAV*RISICL Trigger: GAGGCAAATTGAAATCCTCCAAACAGCTAACCGGAA...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACAGCTTCCACCACGTTaGAGCCATCTTTGGCACTTG | + |
Preference number: 4 (lower is better) Translates to: TPGRTSALIIHPWLQRIEQLPPR*SHLWHL Trigger: CAAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR TCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAGCTGTATCCCAGAGCTaGAGAACTGTTTGTTCACCA | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIAVSQS*RTVCSP Trigger: TGGTGAACAAACAGTTCTTCAGCTCTGGGATACAGC...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | TTGTCGGCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTGGAAGACATTTGTAAGTGTTTTCCAGTaGACTCCTGAGGCCATCATT | + |
Preference number: 4 (lower is better) Translates to: LSAHPESDSEASDSWKTFVSVFQ*TPEAII Trigger: AATGATGGCCTCAGGAGTGCACTGGAAAACACTTAC...AAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGCCGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR TCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAATTTCCAGTGCACTCCTaGGGCCATCATTACTGTCAT | + |
Preference number: 4 (lower is better) Translates to: TPGRTSALIIHPWLQRIEFPVHS*GHHYCH Trigger: ATGACAGTAATGATGGCCTCAGGAGTGCACTGGAAA...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR TCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAATCCACCATGTCTGTCTaGAGTGAAAGAGCTGAGATG | + |
Preference number: 4 (lower is better) Translates to: TPGRTSALIIHPWLQRIESTMSV*SERAEM Trigger: CATCTCAGCTCTTTCACTTCAGACAGACATGGTGGA...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR GCA 90 bp | TTGTCGGCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTGGAAGACATTTTGGAGGATTTCAATTTaGCTCTCAAGACTGCTTCGA | + |
Preference number: 4 (lower is better) Translates to: LSAHPESDSEASDSWKTFWRISI*LSRLLR Trigger: TCGAAGCAGTCTTGAGAGGCAAATTGAAATCCTCCA...AAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGCCGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR TCA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTATAGCAGTCTATGGATaGAAGCCACACTGGAAGACA | + |
Preference number: 4 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSIAVYG*KPHWKT Trigger: TGTCTTCCAGTGTGGCTTTCATCCATAGACTGCTAT...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
||
CDS-3UTR GCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACCATCATTACTGTCATaGAGCTTCCGGTTAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: TPGRTSALIIHPWLQRIEPSLLS*SFRLAV Trigger: AACAGCTAACCGGAAGCTGCATGACAGTAATGATGG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR GCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCCTCCTAAATCTCTCTTaGCCAGCTGTATCCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: PVCQFLWPFLTINVFFLILLNLS*PAVSQS Trigger: GCTCTGGGATACAGCTGGGCAAGAGAGATTTAGGAG...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR CCA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTTCCATTGTTAAATCATaGATTTGCTTCTTCAATGCC | + |
Preference number: 4 (lower is better) Translates to: NHFQETVLPFHCGVRYKSSIVKS*ICFFNA Trigger: GGCATTGAAGAAGCAAATCCATGATTTAACAATGGA...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR CCA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGCAGCTTCCACCACGTTaGAGCCATCTTTGGCACTTG | + |
Preference number: 4 (lower is better) Translates to: ENKPLPLTSILTLEEEGQQLPPR*SHLWHL Trigger: CAAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTG...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
3UTR CAA 72 bp | AACCCCAGGCAGAACGTCTGCATTAATAATACACCCTaGGTTACAGAGAATAGAAGACAAAAGGACTTTGGG | + |
Preference number: 4 (lower is better) Translates to: NPRQNVCINNTP*VTENRRQKDFG Trigger: CCCAAAGTCCTTTTGTCTTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR TCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCTTTCCAGTGCACTCCTaGGGCCATCATTACTGTCAT | + |
Preference number: 4 (lower is better) Translates to: PVCQFLWPFLTINVFFLIFPVHS*GHHYCH Trigger: ATGACAGTAATGATGGCCTCAGGAGTGCACTGGAAA...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
||
CDS-3UTR TCA 90 bp | CAAAGTTTTAAAGACTGGTCCTCTTTTAGATGCAGCACATTCCAAAGCTATGCTTCCACCATGTCTGTCTaGAGTGAAAGAGCTGAGATG | + |
Preference number: 4 (lower is better) Translates to: QSFKDWSSFRCSTFQSYASTMSV*SERAEM Trigger: CATCTCAGCTCTTTCACTTCAGACAGACATGGTGGA...AGCATAGCTTTGGAATGTGCTGCATCTAAAAGAGGACCAGTCTTTAAAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAGGCTACGTTTGTCTGTaGTTCCAAAAGTTCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIGYVCL*FQKFFL Trigger: AAGAAAGAACTTTTGGAAGCACAGACAAACGTAGCC...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATATTTGCCTCTCAAGACTaGTTCGATCTTCTGTGTATT | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIFASQD*FDLLCI Trigger: AATACACAGAAGATCGAAGCAGTCTTGAGAGGCAAA...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGCTCCTAAATCTCTCTTaGCCAGCTGTATCCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: ENKPLPLTSILTLEEEGQLLNLS*PAVSQS Trigger: GCTCTGGGATACAGCTGGGCAAGAGAGATTTAGGAG...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTTTCCGGTTAGCTGTTTaGAGGATTTCAATTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSFRLAV*RISICL Trigger: GAGGCAAATTGAAATCCTCCAAACAGCTAACCGGAA...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAATAGGAATAGTTCTGTaGGTTCCATCCTCAACCATA | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIIGIVL*VPSSTI Trigger: TATGGTTGAGGATGGAACCCACAGAACTATTCCTAT...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR TCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAGTCACATCTTGCTTTTaGCTTATTTGTCTTGATTGC | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIVTSCF*LICLDC Trigger: GCAATCAAGACAAATAAGTCAAAAGCAAGATGTGAC...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAGTTAAATCATGGATTTaGTTCTTCAATGCCGTCACA | + |
Preference number: 4 (lower is better) Translates to: NWFRPLETCFCRPILSQIVKSWI*FFNAVT Trigger: TGTGACGGCATTGAAGAAGCAAATCCATGATTTAAC...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | TTGTCGGCCCATCCTGAGTCAGATAGTGAAGCTTCTGACTCTTGGAAGACATTTCAACAGTTCTTCATCTaGAGTGACTTTTTAGAAGTA | + |
Preference number: 4 (lower is better) Translates to: LSAHPESDSEASDSWKTFQQFFI*SDFLEV Trigger: TACTTCTAAAAAGTCACTGCAGATGAAGAACTGTTG...AAATGTCTTCCAAGAGTCAGAAGCTTCACTATCTGACTCAGGATGGGCCGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR TCA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTGTCACATCTTGCTTTTaGCTTATTTGTCTTGATTGC | + |
Preference number: 4 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSVTSCF*LICLDC Trigger: GCAATCAAGACAAATAAGTCAAAAGCAAGATGTGAC...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCTGGAGGATTTCAATTTaGCTCTCAAGACTGCTTCGA | + |
Preference number: 4 (lower is better) Translates to: PVCQFLWPFLTINVFFLIWRISI*LSRLLR Trigger: TCGAAGCAGTCTTGAGAGGCAAATTGAAATCCTCCA...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR TCA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGGTTCTTCATCTGCAGTaGCTTTTTAGAAGTAGACCC | + |
Preference number: 4 (lower is better) Translates to: ENKPLPLTSILTLEEEGQVLHLQ*LFRSRP Trigger: GGGTCTACTTCTAAAAAGTCACTGCAGATGAAGAAC...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAAACACTTTTGATTCTCTaGATTATCAACATCACGAAG | + |
Preference number: 4 (lower is better) Translates to: TPGRTSALIIHPWLQRIETLLIL*IINITK Trigger: CTTCGTGATGTTGATAATGCAGAGAATCAAAAGTGT...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTACACTTTTGATTCTCTaGATTATCAACATCACGAAG | + |
Preference number: 4 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSTLLIL*IINITK Trigger: CTTCGTGATGTTGATAATGCAGAGAATCAAAAGTGT...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR GCA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCGTTAAATCATGGATTTaGTTCTTCAATGCCGTCACA | + |
Preference number: 4 (lower is better) Translates to: PVCQFLWPFLTINVFFLIVKSWI*FFNAVT Trigger: TGTGACGGCATTGAAGAAGCAAATCCATGATTTAAC...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGGTATATAGCAGTCTATaGATGAAAGCCACACTGGAA | + |
Preference number: 4 (lower is better) Translates to: ENKPLPLTSILTLEEEGQVYSSL*MKATLE Trigger: TTCCAGTGTGGCTTTCATCCATAGACTGCTATATAC...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
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CDS-3UTR CCA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGATAGGAATAGTTCTGTaGGTTCCATCCTCAACCATA | + |
Preference number: 4 (lower is better) Translates to: ENKPLPLTSILTLEEEGQIGIVL*VPSSTI Trigger: TATGGTTGAGGATGGAACCCACAGAACTATTCCTAT...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CCA 90 bp | CAAAGTTTTAAAGACTGGTCCTCTTTTAGATGCAGCACATTCCAAAGCTATGCTTCCATTGTTAAATCATaGATTTGCTTCTTCAATGCC | + |
Preference number: 4 (lower is better) Translates to: QSFKDWSSFRCSTFQSYASIVKS*ICFFNA Trigger: GGCATTGAAGAAGCAAATCCATGATTTAACAATGGA...AGCATAGCTTTGGAATGTGCTGCATCTAAAAGAGGACCAGTCTTTAAAACTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS TCA 90 bp | CCTCTGCTTCGGCCTCGGCCACGTGCAGCTCCGCGCACAACGCGCTaGACTCCGCACGCTCCAGGCGCCCGGAGCCGTTCGTGTCGTAGG | + |
Preference number: 5 (lower is better) Translates to: PLLRPRPRAAPRTTR*TPHAPGARSRSCRR Trigger: CCTACGACACGAACGGCTCCGGGCGCCTGGAGCGTGCGGAGTTCAGCGCGTTGTGCGCGGAGCTGCACGTGGCCGAGGCCGAAGCAGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS GCA 90 bp | GTGTCGAGCCCCCTGAACACGGCCTCTGCTTCGGCCTCGGCCACGTaGAGCTCCGCGCACAACGCGCTGAACTCCGCACGCTCCAGGCGC | + |
Preference number: 5 (lower is better) Translates to: VSSPLNTASASASAT*SSAHNALNSARSRR Trigger: GCGCCTGGAGCGTGCGGAGTTCAGCGCGTTGTGCGCGGAGCTGCACGTGGCCGAGGCCGAAGCAGAGGCCGTGTTCAGGGGGCTCGACAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS CCA 90 bp | TGTTCTTTCCTGGGAATGAGTTGGGCCTCGTCTCCGAGGCGCGCATaGAAGTCCCGCCACGCGGGGCTCGGGCTCTCCGGCTCTGCCACT | + |
Preference number: 5 (lower is better) Translates to: CSFLGMSWASSPRRA*KSRHAGLGLSGSAT Trigger: AGTGGCAGAGCCGGAGAGCCCGAGCCCCGCGTGGCGGGACTTCCATGCGCGCCTCGGAGACGAGGCCCAACTCATTCCCAGGAAAGAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS TCA 90 bp | GAGTTGCGCTTGTGTTCCCCTGAAACTCATTCTTGCAGAGACGCATaGGGAAGCTGGACTTTCCCACTGCGGCGTCGCCAGCCAGCACAA | + |
Preference number: 5 (lower is better) Translates to: ELRLCSPETHSCRDA*GSWTFPLRRRQPAQ Trigger: TTGTGCTGGCTGGCGACGCCGCAGTGGGAAAGTCCAGCTTCCTCATGCGTCTCTGCAAGAATGAGTTTCAGGGGAACACAAGCGCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS-3UTR CAA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCACTCCTAAATCTCTCTaGCCCAGCTGTATCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: LLPGRCHETVAILLRRLTTPKSL*PSCIPE Trigger: CTCTGGGATACAGCTGGGCAAGAGAGATTTAGGAGT...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS TCA 90 bp | CTGCGGCGTCGCCAGCCAGCACAATCTTGTAAGCCTTCTGAGATGTaGCCTTGGAGGTGTTATCCACCATGTCTGTCTGAAGTGAAAGAG | + |
Preference number: 5 (lower is better) Translates to: LRRRQPAQSCKPSEM*PWRCYPPCLSEVKE Trigger: CTCTTTCACTTCAGACAGACATGGTGGATAACACCTCCAAGGTCACATCTCAGAAGGCTTACAAGATTGTGCTGGCTGGCGACGCCGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS GCA 90 bp | AAACTCATTCTTGCAGAGACGCATGAGGAAGCTGGACTTTCCCACTaGGGCGTCGCCAGCCAGCACAATCTTGTAAGCCTTCTGAGATGT | + |
Preference number: 5 (lower is better) Translates to: KLILAETHEEAGLSH*GVASQHNLVSLLRC Trigger: ACATCTCAGAAGGCTTACAAGATTGTGCTGGCTGGCGACGCCGCAGTGGGAAAGTCCAGCTTCCTCATGCGTCTCTGCAAGAATGAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 90 bp | CTTGAATCCTCTGATCCATTTCCTCTTCCAGCTCACTTAGCTGAATaGCCGCCTTGTCCTGGGCTCTCTTCACTGCAATGGCCAGGTTTT | + |
Preference number: 5 (lower is better) Translates to: LESSDPFPLPAHLAE*PPCPGLSSLQWPGF Trigger: AAAACCTGGCCATTGCAGTGAAGAGAGCCCAGGACAAGGCGGCCATTCAGCTAAGTGAGCTGGAAGAGGAAATGGATCAGAGGATTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 90 bp | CCCGTGCAAGATGGAGAACAGCTTCCACCACGTTGGAGCCATCTTTaGCACTTGTTTCACAGAATAATGCCCCATAGGTCATGGCCAGTT | + |
Preference number: 5 (lower is better) Translates to: PVQDGEQLPPRWSHL*HLFHRIMPHRSWPV Trigger: AACTGGCCATGACCTATGGGGCATTATTCTGTGAAACAAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTGTTCTCCATCTTGCACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS-3UTR CAA 90 bp | CTACTGCCAGGCAGATGCCATGAGACTGTGGCCATCCTCCTAAGAAGGTTGACCTCACGAAGATCAGCCTaGTTTCCTACTAACATGATA | + |
Preference number: 5 (lower is better) Translates to: LLPGRCHETVAILLRRLTSRRSA*FPTNMI Trigger: TATCATGTTAGTAGGAAACAAGGCTGATCTTCGTGA...GGTCAACCTTCTTAGGAGGATGGCCACAGTCTCATGGCATCTGCCTGGCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS TCA 90 bp | AGAATCAAACGCTTCTTCATCCCTTATATCTGGAACATCTGTGTCTaGTGCATCGCCCCCAAGGCTCTCCTCTGTTCTGTGCAAAGTCTG | + |
Preference number: 5 (lower is better) Translates to: RIKRFFIPYIWNICV*CIAPKALLCSVQSL Trigger: CAGACTTTGCACAGAACAGAGGAGAGCCTTGGGGGCGATGCATCAGACACAGATGTTCCAGATATAAGGGATGAAGAAGCGTTTGATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 90 bp | AGTTTGATCTCACGGAGAAAGTTCCTTATCACACGTTCATACGGTTaGAGTAGCCTTGGCTCCACAAGGGTGATGTTCTGGTACAGGGTA | + |
Preference number: 5 (lower is better) Translates to: SLISRRKFLITRSYG*SSLGSTRVMFWYRV Trigger: TACCCTGTACCAGAACATCACCCTTGTGGAGCCAAGGCTACTCCAACCGTATGAACGTGTGATAAGGAACTTTCTCCGTGAGATCAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS CCA 90 bp | TGGGCTCTCTTCACTGCAATGGCCAGGTTTTCCATCTCTGTGCTCTaGAGTTTGATCTCACGGAGAAAGTTCCTTATCACACGTTCATAC | + |
Preference number: 5 (lower is better) Translates to: WALFTAMARFSISVL*SLISRRKFLITRSY Trigger: GTATGAACGTGTGATAAGGAACTTTCTCCGTGAGATCAAACTCCAGAGCACAGAGATGGAAAACCTGGCCATTGCAGTGAAGAGAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS CCA 90 bp | TTTTCTTCACTTCCCGTGCAAGATGGAGAACAGCTTCCACCACGTTaGAGCCATCTTTGGCACTTGTTTCACAGAATAATGCCCCATAGG | + |
Preference number: 5 (lower is better) Translates to: FSSLPVQDGEQLPPR*SHLWHLFHRIMPHR Trigger: CCTATGGGGCATTATTCTGTGAAACAAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTGTTCTCCATCTTGCACGGGAAGTGAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS-3UTR CAA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTTTGGAGGATTTCAATTaGCCTCTCAAGACTGCTTCG | + |
Preference number: 5 (lower is better) Translates to: NHFQETVLPFHCGVRYKSLEDFN*PLKTAS Trigger: CGAAGCAGTCTTGAGAGGCAAATTGAAATCCTCCAA...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS TCA 90 bp | TCTTCACTGCAATGGCCAGGTTTTCCATCTCTGTGCTCTGGAGTTTaGTCTCACGGAGAAAGTTCCTTATCACACGTTCATACGGTTGGA | + |
Preference number: 5 (lower is better) Translates to: SSLQWPGFPSLCSGV*SHGESSLSHVHTVG Trigger: TCCAACCGTATGAACGTGTGATAAGGAACTTTCTCCGTGAGATCAAACTCCAGAGCACAGAGATGGAAAACCTGGCCATTGCAGTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS TCA 90 bp | GTTTTCATTTGGAAATCAACTCCTAGAGTTGCGCTTGTGTTCCCCTaGAACTCATTCTTGCAGAGACGCATGAGGAAGCTGGACTTTCCC | + |
Preference number: 5 (lower is better) Translates to: VFIWKSTPRVALVFP*NSFLQRRMRKLDFP Trigger: GGGAAAGTCCAGCTTCCTCATGCGTCTCTGCAAGAATGAGTTTCAGGGGAACACAAGCGCAACTCTAGGAGTTGATTTCCAAATGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS GCA 90 bp | ATTTATACGCAAGGATCTGTTGAGCTTGCTGTAAGTGTTTTCCAGTaGACTCCTGAGGCCATCATTACTGTCATGCAGCTTCCGGTTAGC | + |
Preference number: 5 (lower is better) Translates to: IYTQGSVELAVSVFQ*TPEAIITVMQLPVS Trigger: GCTAACCGGAAGCTGCATGACAGTAATGATGGCCTCAGGAGTGCACTGGAAAACACTTACAGCAAGCTCAACAGATCCTTGCGTATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS-3UTR CAA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTCTCATTTTCCACAGCTaGAATCCTCTGATCCATTTC | + |
Preference number: 5 (lower is better) Translates to: NHFQETVLPFHCGVRYKSLIFHS*NPLIHF Trigger: GAAATGGATCAGAGGATTCAAGCTGTGGAAAATGAG...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTACAGCTTCCACCACGTaGGAGCCATCTTTGGCACTT | + |
Preference number: 5 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSTASTT*EPSLAL Trigger: AAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTGT...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAAACAGCTTCCACCACGTaGGAGCCATCTTTGGCACTT | + |
Preference number: 5 (lower is better) Translates to: TPGRTSALIIHPWLQRIETASTT*EPSLAL Trigger: AAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTGT...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS TCA 90 bp | AACCTTTTAATGGTCACTTGTAAGTCTCCTACTTCTGTTTCATACTaGCGCCTGAGGTCAGTGAGAGCCTCCTCAGCTTTGCGCTTTTCA | + |
Preference number: 5 (lower is better) Translates to: NLLMVTCKSPTSVSY*RLRSVRASSALRFS Trigger: TGAAAAGCGCAAAGCTGAGGAGGCTCTCACTGACCTCAGGCGTCAGTATGAAACAGAAGTAGGAGACTTACAAGTGACCATTAAAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS-3UTR CAA 90 bp | AACCACTTTCAGGAGACAGTTCTGCCCTTCCACTGTGGGGTCAGGTACAAATCTTCACGAAGATCAGCCTaGTTTCCTACTAACATGATA | + |
Preference number: 5 (lower is better) Translates to: NHFQETVLPFHCGVRYKSSRRSA*FPTNMI Trigger: TATCATGTTAGTAGGAAACAAGGCTGATCTTCGTGA...AGATTTGTACCTGACCCCACAGTGGAAGGGCAGAACTGTCTCCTGAAAGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATAGAAGGAAGGCTACGTTaGTCTGTGCTTCCAAAAGTT | + |
Preference number: 5 (lower is better) Translates to: NWFRPLETCFCRPILSQIEGRLR*SVLPKV Trigger: AACTTTTGGAAGCACAGACAAACGTAGCCTTCCTTC...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAATCGGAGTCACACTCATaGTCTCTCAGAGTAGACAGA | + |
Preference number: 5 (lower is better) Translates to: TPGRTSALIIHPWLQRIESESHS*SLRVDR Trigger: TCTGTCTACTCTGAGAGACAATGAGTGTGACTCCGA...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAAGTACAGGGTACTAACTaGTTCTTTCTTCAAGCCTCG | + |
Preference number: 5 (lower is better) Translates to: TPGRTSALIIHPWLQRIEVQGTN*FFLQAS Trigger: CGAGGCTTGAAGAAAGAACAAGTTAGTACCCTGTAC...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
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CDS-3UTR CAA 90 bp | CTAAGCTTGTCAGTCATGTCACCTAGACAACTTTCTGGTAAACACAGCTGTTCTTTGGAGGATTTCAATTaGCCTCTCAAGACTGCTTCG | + |
Preference number: 5 (lower is better) Translates to: LSLSVMSPRQLSGKHSCSLEDFN*PLKTAS Trigger: CGAAGCAGTCTTGAGAGGCAAATTGAAATCCTCCAA...AGAACAGCTGTGTTTACCAGAAAGTTGTCTAGGTGACATGACTGACAAGCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACTTCCGGTTAGCTGTTaGGAGGATTTCAATTTGCCT | + |
Preference number: 5 (lower is better) Translates to: TPGRTSALIIHPWLQRIELPVSC*EDFNLP Trigger: AGGCAAATTGAAATCCTCCAAACAGCTAACCGGAAG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | ACCCCAGGCAGAACGTCTGCATTAATAATACACCCTTGGTTACAGAGAATAGAACTCATTTTCCACAGCTaGAATCCTCTGATCCATTTC | + |
Preference number: 5 (lower is better) Translates to: TPGRTSALIIHPWLQRIELIFHS*NPLIHF Trigger: GAAATGGATCAGAGGATTCAAGCTGTGGAAAATGAG...TTCTATTCTCTGTAACCAAGGGTGTATTATTAATGCAGACGTTCTGCCTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | AATTGGTTCAGGCCACTAGAAACATGTTTTTGTCGGCCCATCCTGAGTCAGATACAATGCCGTCACATCTaGCTTTTGACTTATTTGTCT | + |
Preference number: 5 (lower is better) Translates to: NWFRPLETCFCRPILSQIQCRHI*LLTYLS Trigger: AGACAAATAAGTCAAAAGCAAGATGTGACGGCATTG...TATCTGACTCAGGATGGGCCGACAAAAACATGTTTCTAGTGGCCTGAACCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | CCTGTGTGCCAATTTCTCTGGCCATTCCTCACAATCAATGTATTCTTTTTAATCTCGGAGTCACACTCATaGTCTCTCAGAGTAGACAGA | + |
Preference number: 5 (lower is better) Translates to: PVCQFLWPFLTINVFFLISESHS*SLRVDR Trigger: TCTGTCTACTCTGAGAGACAATGAGTGTGACTCCGA...GATTAAAAAGAATACATTGATTGTGAGGAATGGCCAGAGAAATTGGCACACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGACTCCTAAATCTCTCTaGCCCAGCTGTATCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: ENKPLPLTSILTLEEEGQTPKSL*PSCIPE Trigger: CTCTGGGATACAGCTGGGCAAGAGAGATTTAGGAGT...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS-3UTR CAA 90 bp | GAAAATAAGCCTTTACCCTTAACCTCAATTTTAACATTAGAGGAGGAAGGACAGCTTCCGGTTAGCTGTTaGGAGGATTTCAATTTGCCT | + |
Preference number: 5 (lower is better) Translates to: ENKPLPLTSILTLEEEGQLPVSC*EDFNLP Trigger: AGGCAAATTGAAATCCTCCAAACAGCTAACCGGAAG...CTGTCCTTCCTCCTCTAATGTTAAAATTGAGGTTAAGGGTAAAGGCTTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 |
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CDS TCA 72 bp | CGGCCTCGGCCACGTGCAGCTCCGCGCACAACGCGCTaGACTCCGCACGCTCCAGGCGCCCGGAGCCGTTCG | + |
Preference number: 6 (lower is better) Translates to: RPRPRAAPRTTR*TPHAPGARSRS Trigger: CGAACGGCTCCGGGCGCCTGGAGCGTGCGGAGTTCAGCGCGTTGTGCGCGGAGCTGCACGTGGCCGAGGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS GCA 72 bp | GAAGTCCCGCCACGCGGGGCTCGGGCTCTCCGGCTCTaGCACTTCCCAGGCGCCCTGGGCCTCCGCACTGTC | + |
Preference number: 6 (lower is better) Translates to: EVPPRGARALRL*HFPGALGLRTV Trigger: GACAGTGCGGAGGCCCAGGGCGCCTGGGAAGTGGCAGAGCCGGAGAGCCCGAGCCCCGCGTGGCGGGACTTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS GCA 72 bp | CCCCTGAACACGGCCTCTGCTTCGGCCTCGGCCACGTaGAGCTCCGCGCACAACGCGCTGAACTCCGCACGC | + |
Preference number: 6 (lower is better) Translates to: PLNTASASASAT*SSAHNALNSAR Trigger: GCGTGCGGAGTTCAGCGCGTTGTGCGCGGAGCTGCACGTGGCCGAGGCCGAAGCAGAGGCCGTGTTCAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS CCA 72 bp | CACGCTCCAGGCGCCCGGAGCCGTTCGTGTCGTAGGTaGCGAAGACGGAGCGCAGCCGGGTCAGCTCCTCAG | + |
Preference number: 6 (lower is better) Translates to: HAPGARSRSCRR*RRRSAAGSAPQ Trigger: CTGAGGAGCTGACCCGGCTGCGCTCCGTCTTCGCCACCTACGACACGAACGGCTCCGGGCGCCTGGAGCGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS GCA 72 bp | ATCGCGGTCCGTGTCGAGCCCCCTGAACACGGCCTCTaGTTCGGCCTCGGCCACGTGCAGCTCCGCGCACAA | + |
Preference number: 6 (lower is better) Translates to: IAVRVEPPEHGL*FGLGHVQLRAQ Trigger: TTGTGCGCGGAGCTGCACGTGGCCGAGGCCGAAGCAGAGGCCGTGTTCAGGGGGCTCGACACGGACCGCGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS CCA 72 bp | GAGGAACTAAGAGTGCTGCCCTCACCAGCAGAGCCCTaGGGCTGCCAGTGTAAGACAGAGGCCACACTTTCA | + |
Preference number: 6 (lower is better) Translates to: EELRVLPSPAEP*GCQCKTEATLS Trigger: TGAAAGTGTGGCCTCTGTCTTACACTGGCAGCCCCAGGGCTCTGCTGGTGAGGGCAGCACTCTTAGTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 72 bp | TACAGGGTACTAACTTGTTCTTTCCTGGGAATGAGTTaGGCCTCGTCTCCGAGGCGCGCATGGAAGTCCCGC | + |
Preference number: 6 (lower is better) Translates to: YRVLTCSFLGMS*ASSPRRAWKSR Trigger: GCGGGACTTCCATGCGCGCCTCGGAGACGAGGCCCAACTCATTCCCAGGAAAGAACAAGTTAGTACCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS CAA 72 bp | GTACAGGGTACTAACTTGTTCTTTCCTGGGAATGAGTaGGGCCTCGTCTCCGAGGCGCGCATGGAAGTCCCG | + |
Preference number: 6 (lower is better) Translates to: VQGTNLFFPGNE*GLVSEARMEVP Trigger: CGGGACTTCCATGCGCGCCTCGGAGACGAGGCCCAACTCATTCCCAGGAAAGAACAAGTTAGTACCCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS TCA 72 bp | TTGTGTTCCCCTGAAACTCATTCTTGCAGAGACGCATaGGGAAGCTGGACTTTCCCACTGCGGCGTCGCCAG | + |
Preference number: 6 (lower is better) Translates to: LCSPETHSCRDA*GSWTFPLRRRQ Trigger: CTGGCGACGCCGCAGTGGGAAAGTCCAGCTTCCTCATGCGTCTCTGCAAGAATGAGTTTCAGGGGAACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 72 bp | TCTGATCCATTTCCTCTTCCAGCTCACTTAGCTGAATaGCCGCCTTGTCCTGGGCTCTCTTCACTGCAATGG | + |
Preference number: 6 (lower is better) Translates to: SDPFPLPAHLAE*PPCPGLSSLQW Trigger: CCATTGCAGTGAAGAGAGCCCAGGACAAGGCGGCCATTCAGCTAAGTGAGCTGGAAGAGGAAATGGATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS TCA 72 bp | CGCTTCTTCATCCCTTATATCTGGAACATCTGTGTCTaGTGCATCGCCCCCAAGGCTCTCCTCTGTTCTGTG | + |
Preference number: 6 (lower is better) Translates to: RFFIPYIWNICV*CIAPKALLCSV Trigger: CACAGAACAGAGGAGAGCCTTGGGGGCGATGCATCAGACACAGATGTTCCAGATATAAGGGATGAAGAAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CAA 72 bp | CTCCACAAGGGTGATGTTCTGGTACAGGGTACTAACTaGTTCTTTCCTGGGAATGAGTTGGGCCTCGTCTCC | + |
Preference number: 6 (lower is better) Translates to: LHKGDVLVQGTN*FFPGNELGLVS Trigger: GGAGACGAGGCCCAACTCATTCCCAGGAAAGAACAAGTTAGTACCCTGTACCAGAACATCACCCTTGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222414.2 |
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CDS CCA 72 bp | TCACGGAGAAAGTTCCTTATCACACGTTCATACGGTTaGAGTAGCCTTGGCTCCACAAGGGTGATGTTCTGG | + |
Preference number: 6 (lower is better) Translates to: SRRKFLITRSYG*SSLGSTRVMFW Trigger: CCAGAACATCACCCTTGTGGAGCCAAGGCTACTCCAACCGTATGAACGTGTGATAAGGAACTTTCTCCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS CCA 72 bp | TCATCCTCTGTCCTTTTCTTCACTTCCCGTGCAAGATaGAGAACAGCTTCCACCACGTTGGAGCCATCTTTG | + |
Preference number: 6 (lower is better) Translates to: SSSVLFFTSRAR*RTASTTLEPSL Trigger: CAAAGATGGCTCCAACGTGGTGGAAGCTGTTCTCCATCTTGCACGGGAAGTGAAGAAAAGGACAGAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS TCA 72 bp | TGGAAATCAACTCCTAGAGTTGCGCTTGTGTTCCCCTaGAACTCATTCTTGCAGAGACGCATGAGGAAGCTG | + |
Preference number: 6 (lower is better) Translates to: WKSTPRVALVFP*NSFLQRRMRKL Trigger: CAGCTTCCTCATGCGTCTCTGCAAGAATGAGTTTCAGGGGAACACAAGCGCAACTCTAGGAGTTGATTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 72 bp | CTTCCCGTGCAAGATGGAGAACAGCTTCCACCACGTTaGAGCCATCTTTGGCACTTGTTTCACAGAATAATG | + |
Preference number: 6 (lower is better) Translates to: LPVQDGEQLPPR*SHLWHLFHRIM Trigger: CATTATTCTGTGAAACAAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTGTTCTCCATCTTGCACGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CAA 90 bp | CTCTTCACTGCAATGGCCAGGTTTTCCATCTCTGTGCTCTGGAGTTaGATCTCACGGAGAAAGTTCCTTATCACACGTTCATACGGTTGG | + |
Preference number: 6 (lower is better) Translates to: LFTAMARFSISVLWS*ISRRKFLITRSYGW Trigger: CCAACCGTATGAACGTGTGATAAGGAACTTTCTCCGTGAGATCAAACTCCAGAGCACAGAGATGGAAAACCTGGCCATTGCAGTGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS CAA 90 bp | CAAGATGGAGAACAGCTTCCACCACGTTGGAGCCATCTTTGGCACTaGTTTCACAGAATAATGCCCCATAGGTCATGGCCAGTTTTTCTC | + |
Preference number: 6 (lower is better) Translates to: QDGEQLPPRWSHLWH*FHRIMPHRSWPVFL Trigger: GAGAAAAACTGGCCATGACCTATGGGGCATTATTCTGTGAAACAAGTGCCAAAGATGGCTCCAACGTGGTGGAAGCTGTTCTCCATCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS GCA 72 bp | CAAGGATCTGTTGAGCTTGCTGTAAGTGTTTTCCAGTaGACTCCTGAGGCCATCATTACTGTCATGCAGCTT | + |
Preference number: 6 (lower is better) Translates to: QGSVELAVSVFQ*TPEAIITVMQL Trigger: AAGCTGCATGACAGTAATGATGGCCTCAGGAGTGCACTGGAAAACACTTACAGCAAGCTCAACAGATCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CAA 72 bp | CTCCACAAGGGTGATGTTCTGGTACAGGGTACTAACTaGTTCTTTCTTCAAGCCTCGTTTCAGTCTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: LHKGDVLVQGTN*FFLQASFQSVS Trigger: GGAGACAGACTGAAACGAGGCTTGAAGAAAGAACAAGTTAGTACCCTGTACCAGAACATCACCCTTGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058292.13 |
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CDS CAA 72 bp | GCAATGGCCAGGTTTTCCATCTCTGTGCTCTGGAGTTaGATCTCACGGAGAAAGTTCCTTATCACACGTTCA | + |
Preference number: 6 (lower is better) Translates to: AMARFSISVLWS*ISRRKFLITRS Trigger: TGAACGTGTGATAAGGAACTTTCTCCGTGAGATCAAACTCCAGAGCACAGAGATGGAAAACCTGGCCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS TCA 72 bp | CAATGGCCAGGTTTTCCATCTCTGTGCTCTGGAGTTTaGTCTCACGGAGAAAGTTCCTTATCACACGTTCAT | + |
Preference number: 6 (lower is better) Translates to: QWPGFPSLCSGV*SHGESSLSHVH Trigger: ATGAACGTGTGATAAGGAACTTTCTCCGTGAGATCAAACTCCAGAGCACAGAGATGGAAAACCTGGCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058292.13 ENSMUST00000222414.2 |
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CDS GCA 72 bp | TTTTCCAGTGCACTCCTGAGGCCATCATTACTGTCATaGAGCTTCCGGTTAGCTGTTTGGAGGATTTCAATT | + |
Preference number: 6 (lower is better) Translates to: FSSALLRPSLLS*SFRLAVWRISI Trigger: AATTGAAATCCTCCAAACAGCTAACCGGAAGCTGCATGACAGTAATGATGGCCTCAGGAGTGCACTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 72 bp | GCCTTGTTTCCTACTAACATGATAGGAATAGTTCTGTaGGTTCCATCCTCAACCATATCCACCCATTCTCGG | + |
Preference number: 6 (lower is better) Translates to: ALFPTNMIGIVL*VPSSTISTHSR Trigger: CCGAGAATGGGTGGATATGGTTGAGGATGGAACCCACAGAACTATTCCTATCATGTTAGTAGGAAACAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CAA 72 bp | GAGTTTTCATTTGGAAATCAACTCCTAGAGTTGCGCTaGTGTTCCCCTGAAACTCATTCTTGCAGAGACGCA | + |
Preference number: 6 (lower is better) Translates to: EFSFGNQLLELR*CSPETHSCRDA Trigger: TGCGTCTCTGCAAGAATGAGTTTCAGGGGAACACAAGCGCAACTCTAGGAGTTGATTTCCAAATGAAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CCA 72 bp | TGGCACTTGTTTCACAGAATAATGCCCCATAGGTCATaGCCAGTTTTTCTCCAAGATATGCTGATATACACT | + |
Preference number: 6 (lower is better) Translates to: WHLFHRIMPHRS*PVFLQDMLIYT Trigger: AGTGTATATCAGCATATCTTGGAGAAAAACTGGCCATGACCTATGGGGCATTATTCTGTGAAACAAGTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS CAA 72 bp | CAATCAGAGTTTTCATTTGGAAATCAACTCCTAGAGTaGCGCTTGTGTTCCCCTGAAACTCATTCTTGCAGA | + |
Preference number: 6 (lower is better) Translates to: QSEFSFGNQLLE*RLCSPETHSCR Trigger: TCTGCAAGAATGAGTTTCAGGGGAACACAAGCGCAACTCTAGGAGTTGATTTCCAAATGAAAACTCTGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |
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CDS TCA 72 bp | GCCAGTTTTTCTCCAAGATATGCTGATATACACTTTTaGTTCTCTGCATTATCAACATCACGAAGATCAGCC | + |
Preference number: 6 (lower is better) Translates to: ASFSPRYADIHF*FSALSTSRRSA Trigger: GGCTGATCTTCGTGATGTTGATAATGCAGAGAATCAAAAGTGTATATCAGCATATCTTGGAGAAAAACTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058292.13 ENSMUST00000102837.3 ENSMUST00000222414.2 |