Pregenerated sensors for RASD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034472Ensembl transcript IDs: ENSMUST00000132133.2, ENSMUST00000139848.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTaGGAATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: WAQGTHLGPSVGCAQ*ESSATSLKALPKPP Trigger: AGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| 3UTR GCA 90 bp | GGCAGAGGCCGGAGCTGGGGACACACAGGACCCCTCGCTCTCTGTTaGCTAGCACACAAGGGACCAGTATCAGGTAGGTGCTTGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: GRGRSWGHTGPLALC*LAHKGPVSGRCLAD Trigger: ATCTGCCAAGCACCTACCTGATACTGGTCCCTTGTGTGCTAGGCAACAGAGAGCGAGGGGTCCTGTGTGTCCCCAGCTCCGGCCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 90 bp | ACGGCAGGAGCTGAAGACCCAGGATGGTGGTTTCTCCAGGGACACTaGGACCAAGCTGGTCTGAACAGAGGGAGCAGAGGCCACCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TAGAEDPGWWFLQGH*DQAGLNRGSRGHQG Trigger: TCCCTGGTGGCCTCTGCTCCCTCTGTTCAGACCAGCTTGGTCTCAGTGTCCCTGGAGAAACCACCATCCTGGGTCTTCAGCTCCTGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 90 bp | AGCTCCAAGGAGACAGGGTATGACGTGGTGTGTATGGAAGGCCCATaGCCGACCCAGCTTGCAGGGAGTGACCTGGGCCTTGAGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SSKETGYDVVCMEGP*PTQLAGSDLGLERM Trigger: CATTCTCTCAAGGCCCAGGTCACTCCCTGCAAGCTGGGTCGGCCATGGGCCTTCCATACACACCACGTCATACCCTGTCTCCTTGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 90 bp | ATCCTCTCCAGAGGGCAGGAGATTACTGCTGTGACTGTGGCACTGTaGGCTCTTTGTAGGCCGATGGACACTGGGCAGAACACAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: ILSRGQEITAVTVAL*ALCRPMDTGQNTAC Trigger: GCAGGCTGTGTTCTGCCCAGTGTCCATCGGCCTACAAAGAGCCCACAGTGCCACAGTCACAGCAGTAATCTCCTGCCCTCTGGAGAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 90 bp | GACCAAGCTGGTCTGAACAGAGGGAGCAGAGGCCACCAGGGAACCTaGCTGGGGCATCTGGCTAAGATGTTCTCATCCTGTGACTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: DQAGLNRGSRGHQGT*LGHLAKMFSSCDLY Trigger: GTACAAGTCACAGGATGAGAACATCTTAGCCAGATGCCCCAGCCAGGTTCCCTGGTGGCCTCTGCTCCCTCTGTTCAGACCAGCTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 90 bp | ATATCGTATGGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTGATCTaGGGGACACCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: ISYGGAWEWSQKAVI*GTPVSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATACGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 90 bp | GAGAAATATCGTATGGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTaGTCTGGGGGACACCGGTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: EKYRMEEPGSGAKRQ*SGGHRSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATACGATATTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 90 bp | GTGTGTGTATGGAGTCTGGGCTGGGCCTGGTGTGCAGAGCAAGGGTaGCAATGTGCACAGTATCCACAGATAGCCTCAGTGATTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VCVWSLGWAWCAEQG*QCAQYPQIASVIAL Trigger: CAGAGCAATCACTGAGGCTATCTGTGGATACTGTGCACATTGTCACCCTTGCTCTGCACACCAGGCCCAGCCCAGACTCCATACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 90 bp | AATATGTCCTTCCAACCTTTCCTGGACTCGGCTCTGGCTCTCAACTaGTCCACTTCCTCCAACAGCTGTGTGCGCAGAAAGGGCACCATG | + |
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Preference number: 1 (lower is better) Translates to: NMSFQPFLDSALALN*STSSNSCVRRKGTM Trigger: CATGGTGCCCTTTCTGCGCACACAGCTGTTGGAGGAAGTGGAGCAGTTGAGAGCCAGAGCCGAGTCCAGGAAAGGTTGGAAGGACATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 90 bp | TGTGTATGGAAGGCCCATGGCCGACCCAGCTTGCAGGGAGTGACCTaGGCCTTGAGAGAATGCACTATTAGATTGCTGTGGTTTCTGATA | + |
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Preference number: 1 (lower is better) Translates to: CVWKAHGRPSLQGVT*ALRECTIRLLWFLI Trigger: TATCAGAAACCACAGCAATCTAATAGTGCATTCTCTCAAGGCCCAGGTCACTCCCTGCAAGCTGGGTCGGCCATGGGCCTTCCATACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 90 bp | CCACAGATAGCCTCAGTGATTGCTCTGAGGAAGGCATATGTAACATaGTCCAAATCCCGGCTACTGGGAGCTCCAAGGAGACAGGGTATG | + |
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Preference number: 1 (lower is better) Translates to: PQIASVIALRKAYVT*SKSRLLGAPRRQGM Trigger: CATACCCTGTCTCCTTGGAGCTCCCAGTAGCCGGGATTTGGATCATGTTACATATGCCTTCCTCAGAGCAATCACTGAGGCTATCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 90 bp | ACTTGTACTGAGCATCTTGCTTTGATGCAGGACTCCTGGCCTTTTTaGATCCCTCCCACGGAAAGCTTGTCTCGGCATGAGTGCTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: TCTEHLALMQDSWPF*IPPTESLSRHECCH Trigger: ATGACAGCACTCATGCCGAGACAAGCTTTCCGTGGGAGGGATGCAAAAAGGCCAGGAGTCCTGCATCAAAGCAAGATGCTCAGTACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 90 bp | CATAGACTTGCCTGGACAAGTACCTGGTATACTCAGGACTGGGGCTaGAGTCATTGTAGGACAGAAGCAGGTGCTGAAGCAATTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: HRLAWTSTWYTQDWG*SHCRTEAGAEAIVL Trigger: CAGCACAATTGCTTCAGCACCTGCTTCTGTCCTACAATGACTCCAGCCCCAGTCCTGAGTATACCAGGTACTTGTCCAGGCAAGTCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 90 bp | CATGGCCGACCCAGCTTGCAGGGAGTGACCTGGGCCTTGAGAGAATaGACTATTAGATTGCTGTGGTTTCTGATAATCATCAGCTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: HGRPSLQGVTWALRE*TIRLLWFLIIISFN Trigger: ATTGAAGCTGATGATTATCAGAAACCACAGCAATCTAATAGTGCATTCTCTCAAGGCCCAGGTCACTCCCTGCAAGCTGGGTCGGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CAA 90 bp | GAGGTCCAGGCAGTAGAGCTTGACCGGATGGACCAGGCCATAGACTaGCCTGGACAAGTACCTGGTATACTCAGGACTGGGGCTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: EVQAVELDRMDQAID*PGQVPGILRTGAGV Trigger: GACTCCAGCCCCAGTCCTGAGTATACCAGGTACTTGTCCAGGCAAGTCTATGGCCTGGTCCATCCGGTCAAGCTCTACTGCCTGGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAATATGTCCTTCCAACCTTTCCTGGACTCGGCTCTGGCTCTCAACTGCTGCCCTCTGTGGGATGTaGGCAGTGGGAATCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PAICPSNLSWTRLWLSTAALCGM*AVGILS Trigger: GCTGAGGATTCCCACTGCGCACATCCCACAGAGGGC...AGCAGTTGAGAGCCAGAGCCGAGTCCAGGAAAGGTTGGAAGGACATATTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CAA 90 bp | TGGCTAAGATGTTCTCATCCTGTGACTTGTACTGAGCATCTTGCTTaGATGCAGGACTCCTGGCCTTTTTGCATCCCTCCCACGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: WLRCSHPVTCTEHLA*MQDSWPFCIPPTES Trigger: GCTTTCCGTGGGAGGGATGCAAAAAGGCCAGGAGTCCTGCATCAAAGCAAGATGCTCAGTACAAGTCACAGGATGAGAACATCTTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR CCA 90 bp | ATACTCAGGACTGGGGCTGGAGTCATTGTAGGACAGAAGCAGGTGCTGAAGCAACAGAGTCATCTCAAATaGGCCAGCTGCAGTACTAAT | + |
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Preference number: 2 (lower is better) Translates to: ILRTGAGVIVGQKQVLKQQSHLK*ASCSTN Trigger: ATTAGTACTGCAGCTGGCCCATTTGAGATGACTCTG...TTGCTTCAGCACCTGCTTCTGTCCTACAATGACTCCAGCCCCAGTCCTGAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATTAGATTGCTGTGGTTTCTGATAATCATCAGCTTCAATAATTCATGGGGGGGCCACCAGGGAACCTaGCTGGGGCATCTGGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: TIRLLWFLIIISFNNSWGGHQGT*LGHLAK Trigger: CTTAGCCAGATGCCCCAGCCAGGTTCCCTGGTGGCC...CCCCCATGAATTATTGAAGCTGATGATTATCAGAAACCACAGCAATCTAATAGT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCACAGTATCCACAGATAGCCTCAGTGATTGCTCTGAGGAAGGCATATGTACCAAAGCAATGGATTTaGATTGGGAAGCCCGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: CAQYPQIASVIALRKAYVPKQWI*IGKPGQ Trigger: TTGACCGGGCTTCCCAATTCAAATCCATTGCTTTGG...TACATATGCCTTCCTCAGAGCAATCACTGAGGCTATCTGTGGATACTGTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGAATCACTCTCTCAAAGCTCAGTCATCCTCTCCAGAGGGCAGGAGATTACTCAAAGACAAAGCATTaGCCTCTTACAGTACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VRITLSKLSHPLQRAGDYSKTKH*PLTVQG Trigger: TCCTTGTACTGTAAGAGGCCAATGCTTTGTCTTTGA...GTAATCTCCTGCCCTCTGGAGAGGATGACTGAGCTTTGAGAGAGTGATTCTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR GCA 90 bp | GTGACCTGGGCCTTGAGAGAATGCACTATTAGATTGCTGTGGTTTCTGATAATCGGACTTCATGTCTACTaGAAACAGAACAGGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VTWALRECTIRLLWFLIIGLHVY*KQNRKD Trigger: GTCTTTCCTGTTCTGTTTGCAGTAGACATGAAGTCC...GATTATCAGAAACCACAGCAATCTAATAGTGCATTCTCTCAAGGCCCAGGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 72 bp | GGGGCAGTGTACACAGCTGGGCCAGACGGCAGGAGCTaGAGACCCAGGATGGTGGTTTCTCCAGGGACACTG | + |
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Preference number: 3 (lower is better) Translates to: GAVYTAGPDGRS*RPRMVVSPGTL Trigger: CAGTGTCCCTGGAGAAACCACCATCCTGGGTCTTCAGCTCCTGCCGTCTGGCCCAGCTGTGTACACTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 72 bp | CGGAGCTGGGGACACACAGGACCCCTCGCTCTCTGTTaGCTAGCACACAAGGGACCAGTATCAGGTAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: RSWGHTGPLALC*LAHKGPVSGRC Trigger: GCACCTACCTGATACTGGTCCCTTGTGTGCTAGGCAACAGAGAGCGAGGGGTCCTGTGTGTCCCCAGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | GAGACAGGGTATGACGTGGTGTGTATGGAAGGCCCATaGCCGACCCAGCTTGCAGGGAGTGACCTGGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: ETGYDVVCMEGP*PTQLAGSDLGL Trigger: AAGGCCCAGGTCACTCCCTGCAAGCTGGGTCGGCCATGGGCCTTCCATACACACCACGTCATACCCTGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 72 bp | CGTATGGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTaGTCTGGGGGACACCGGTCTCTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RMEEPGSGAKRQ*SGGHRSLSLSL Trigger: GAGAGAGAGAGAGAGAGACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | GGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTGATCTaGGGGACACCGGTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GGAWEWSQKAVI*GTPVSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | TCACGGCTCACAGGAGGTGTCCAGGAAACAAGAGAATaGGCACAGGGTACACACCTAGGGCCCTCTGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SRLTGGVQETRE*AQGTHLGPSVG Trigger: TCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTCTCTTGTTTCCTGGACACCTCCTGTGAGCCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | GGTCTGAACAGAGGGAGCAGAGGCCACCAGGGAACCTaGCTGGGGCATCTGGCTAAGATGTTCTCATCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GLNRGSRGHQGT*LGHLAKMFSSC Trigger: ACAGGATGAGAACATCTTAGCCAGATGCCCCAGCCAGGTTCCCTGGTGGCCTCTGCTCCCTCTGTTCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | AGGATGGTGGTTTCTCCAGGGACACTGAGACCAAGCTaGTCTGAACAGAGGGAGCAGAGGCCACCAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RMVVSPGTLRPS*SEQREQRPPGN Trigger: GTTCCCTGGTGGCCTCTGCTCCCTCTGTTCAGACCAGCTTGGTCTCAGTGTCCCTGGAGAAACCACCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 72 bp | CAGTCATCCTCTCCAGAGGGCAGGAGATTACTGCTGTaGCTGTGGCACTGTGGGCTCTTTGTAGGCCGATGG | + |
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Preference number: 3 (lower is better) Translates to: QSSSPEGRRLLL*LWHCGLFVGRW Trigger: CCATCGGCCTACAAAGAGCCCACAGTGCCACAGTCACAGCAGTAATCTCCTGCCCTCTGGAGAGGATGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 72 bp | TGCATCCCTCCCACGGAAAGCTTGTCTCGGCATGAGTaGTGTCATGTCCCTAGACATGTCTCCGTCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: CIPPTESLSRHE*CHVPRHVSVLP Trigger: TGGGAGGACGGAGACATGTCTAGGGACATGACAGCACTCATGCCGAGACAAGCTTTCCGTGGGAGGGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 72 bp | GCAGGTGTGTGTATGGAGTCTGGGCTGGGCCTGGTGTaGAGAGCAAGGGTGACAATGTGCACAGTATCCACA | + |
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Preference number: 3 (lower is better) Translates to: AGVCMESGLGLV*RARVTMCTVST Trigger: TGTGGATACTGTGCACATTGTCACCCTTGCTCTGCACACCAGGCCCAGCCCAGACTCCATACACACACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | GGAGCAGAGGCCACCAGGGAACCTGGCTGGGGCATCTaGCTAAGATGTTCTCATCCTGTGACTTGTACTGAG | + |
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Preference number: 3 (lower is better) Translates to: GAEATREPGWGI*LRCSHPVTCTE Trigger: CTCAGTACAAGTCACAGGATGAGAACATCTTAGCCAGATGCCCCAGCCAGGTTCCCTGGTGGCCTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | AGAGGGCAGGAGATTACTGCTGTGACTGTGGCACTGTaGGCTCTTTGTAGGCCGATGGACACTGGGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: RGQEITAVTVAL*ALCRPMDTGQN Trigger: GTTCTGCCCAGTGTCCATCGGCCTACAAAGAGCCCACAGTGCCACAGTCACAGCAGTAATCTCCTGCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | AAGGCCCATGGCCGACCCAGCTTGCAGGGAGTGACCTaGGCCTTGAGAGAATGCACTATTAGATTGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: KAHGRPSLQGVT*ALRECTIRLLW Trigger: CCACAGCAATCTAATAGTGCATTCTCTCAAGGCCCAGGTCACTCCCTGCAAGCTGGGTCGGCCATGGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 72 bp | CTTCCACCACATGGAACCCCGGGACCAAACTCAGGTTaGAAGCTTGGCAGCAGGTGTCTTTACCCAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LPPHGTPGPNSG*KLGSRCLYPES Trigger: TGACTCTGGGTAAAGACACCTGCTGCCAAGCTTTCAACCTGAGTTTGGTCCCGGGGTTCCATGTGGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 72 bp | GAGCATCTTGCTTTGATGCAGGACTCCTGGCCTTTTTaGATCCCTCCCACGGAAAGCTTGTCTCGGCATGAG | + |
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Preference number: 3 (lower is better) Translates to: EHLALMQDSWPF*IPPTESLSRHE Trigger: CTCATGCCGAGACAAGCTTTCCGTGGGAGGGATGCAAAAAGGCCAGGAGTCCTGCATCAAAGCAAGATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | GCCTGGACAAGTACCTGGTATACTCAGGACTGGGGCTaGAGTCATTGTAGGACAGAAGCAGGTGCTGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: AWTSTWYTQDWG*SHCRTEAGAEA Trigger: TGCTTCAGCACCTGCTTCTGTCCTACAATGACTCCAGCCCCAGTCCTGAGTATACCAGGTACTTGTCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 72 bp | ATTGATAGTGTACACAGAGGTCCAGGCAGTAGAGCTTaGCCGGATGGACCAGGCCATAGACTTGCCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: IDSVHRGPGSRA*PDGPGHRLAWT Trigger: TGTCCAGGCAAGTCTATGGCCTGGTCCATCCGGTCAAGCTCTACTGCCTGGACCTCTGTGTACACTATCAAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | AAACAAAGAGAAATATCGTATGGAGGAGCCTGGGAGTaGAGCCAAAAGGCAGTGATCTGGGGGACACCGGTC | + |
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Preference number: 3 (lower is better) Translates to: KQREISYGGAWE*SQKAVIWGTPV Trigger: GACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATACGATATTTCTCTTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | AGACTTGCCTGGACAAGTACCTGGTATACTCAGGACTaGGGCTGGAGTCATTGTAGGACAGAAGCAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: RLAWTSTWYTQD*GWSHCRTEAGA Trigger: AGCACCTGCTTCTGTCCTACAATGACTCCAGCCCCAGTCCTGAGTATACCAGGTACTTGTCCAGGCAAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR TCA 72 bp | GCCTCAGTGATTGCTCTGAGGAAGGCATATGTAACATaGTCCAAATCCCGGCTACTGGGAGCTCCAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: ASVIALRKAYVT*SKSRLLGAPRR Trigger: TCTCCTTGGAGCTCCCAGTAGCCGGGATTTGGATCATGTTACATATGCCTTCCTCAGAGCAATCACTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | ACATGGAACCCCGGGACCAAACTCAGGTTGAAAGCTTaGCAGCAGGTGTCTTTACCCAGAGTCATCTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: TWNPGTKLRLKA*QQVSLPRVISN Trigger: ATTTGAGATGACTCTGGGTAAAGACACCTGCTGCCAAGCTTTCAACCTGAGTTTGGTCCCGGGGTTCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR GCA 72 bp | CCCAGCTTGCAGGGAGTGACCTGGGCCTTGAGAGAATaGACTATTAGATTGCTGTGGTTTCTGATAATCATC | + |
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Preference number: 3 (lower is better) Translates to: PSLQGVTWALRE*TIRLLWFLIII Trigger: GATGATTATCAGAAACCACAGCAATCTAATAGTGCATTCTCTCAAGGCCCAGGTCACTCCCTGCAAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGCACAGTATCCACAGATAGCCTCAGTGATTGCTCTGAGGAAGGCATATGTAGCCAAAGCAATGGATTaGAATTGGGAAGCCCGGTCA | + |
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Preference number: 3 (lower is better) Translates to: CAQYPQIASVIALRKAYVAKAMD*NWEARS Trigger: TGACCGGGCTTCCCAATTCAAATCCATTGCTTTGGC...TACATATGCCTTCCTCAGAGCAATCACTGAGGCTATCTGTGGATACTGTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| 3UTR CCA 72 bp | ACCTGGGCCTTGAGAGAATGCACTATTAGATTGCTGTaGTTTCTGATAATCATCAGCTTCAATAATTCATGG | + |
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Preference number: 3 (lower is better) Translates to: TWALRECTIRLL*FLIIISFNNSW Trigger: CCATGAATTATTGAAGCTGATGATTATCAGAAACCACAGCAATCTAATAGTGCATTCTCTCAAGGCCCAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCTCCCCGATGTCCCTGCGCAGCTCAGCCTCCATaGCAGGGACCTGGCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: SSATSLKALPKPPPRCPCAAQPP*QGPGGT Trigger: TGTGCCGCCAGGTCCCTGCCATGGAGGCTGAGCTGC...GCAGGGACATCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS-3UTR TCA 90 bp | GGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCAGCGTCGGGCAAAGGGTaGGACCATGCCATAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GPSVGCAQWESSATSLKAASGKG*DHAIGT Trigger: GGTGCCTATGGCATGGTCTCACCCTTTGCCCGACGC...TGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCTCCCCGATGTCCCTGCTCCCACAGATCACCATaGGCAGCTCTGCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSATSLKALPKPPPRCPCSHRSP*AALLPP Trigger: AGGAGGCAGCAGAGCTGCCCATGGTGATCTGTGGGA...GCAGGGACATCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GTATGGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTGATCTGGGGGACACCGGTGCAGCTCAGCCTCCATaGCAGGGACCTGGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VWRSLGVEPKGSDLGDTGAAQPP*QGPGGT Trigger: TGTGCCGCCAGGTCCCTGCCATGGAGGCTGAGCTGC...ACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR GCA 90 bp | GAATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCTCCCCGATGTCCCAGACAATGGAGCTCTTaGCCACTCGGGAGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESSATSLKALPKPPPRCPRQWSS*PLGRHP Trigger: TGGGTGCCTCCCGAGTGGGCAAGAGCTCCATTGTCT...GGGACATCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | GGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCCCTCAAAGCGGCCATTaGGGAAGCGGGAGACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGYTPRALCGMCAVGILPQSGH*GSGRQW Trigger: CCATTGTCTCCCGCTTCCTCAATGGCCGCTTTGAGG...GAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCAGACAATGGAGCTCTTaGCCACTCGGGAGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAQGTHLGPSVGCAQWESRQWSS*PLGRHP Trigger: TGGGTGCCTCCCGAGTGGGCAAGAGCTCCATTGTCT...GGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACTGCGGAAGCGGGAGACAATaGAGCTCTTGCCCACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWDVRSGNPQPPPLRHCGSGRQ*SSCPLG Trigger: CCCGAGTGGGCAAGAGCTCCATTGTCTCCCGCTTCC...GCAGTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGGAAGCGGGAGACAATaGAGCTCTTGCCCACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGTHLGPSVGCAQWESSGSGRQ*SSCPLG Trigger: CCCGAGTGGGCAAGAGCTCCATTGTCTCCCGCTTCC...TGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | AATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCTCCCCGATGTCCCTATGGCAGGGAATGGGTaGTTGCCAGAGGTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPQPPPLRHCPSPLPDVPMAGNG*LPEVSR Trigger: CCTGGACACCTCTGGCAACCACCCATTCCCTGCCAT...AGGGACATCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCATGGCAGGGAATGGGTaGTTGCCAGAGGTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTHLGPSVGCAQWESSAMAGNG*LPEVSR Trigger: CCTGGACACCTCTGGCAACCACCCATTCCCTGCCAT...GGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | GGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCGTTTCTGGAGGCGCTTaGCCTCATCAAAGGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGYTPRALCGMCAVGILVSGGA*PHQRTP Trigger: GGGAGTCCTTTGATGAGGTCAAGCGCCTCCAGAAAC...GAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| 3UTR CAA 72 bp | ACGTGGTGTGTATGGAAGGCCCATGGCCGACCCAGCTaGCAGGGAGTGACCTGGGCCTTGAGAGAATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TWCVWKAHGRPS*QGVTWALRECT Trigger: AGTGCATTCTCTCAAGGCCCAGGTCACTCCCTGCAAGCTGGGTCGGCCATGGGCCTTCCATACACACCACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGAGAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGCCTCAAAGCGGCCATTaGGGAAGCGGGAGACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TREWAQGTHLGPSVGCAQPQSGH*GSGRQW Trigger: CCATTGTCTCCCGCTTCCTCAATGGCCGCTTTGAGG...CTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTCTCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAACAAAGGGTGAGACCATaGCATAGGCACCTGCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: EWAQGTHLGPSVGCAQWEQRVRP*HRHLRP Trigger: AGGTCGCAGGTGCCTATGGCATGGTCTCACCCTTTG...TTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACATAGTGGGCGTGTACTaGTCCTCAAAGCGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GYTPRALCGMCAVGILSHIVGVY*SSKRPL Trigger: CAATGGCCGCTTTGAGGACCAGTACACGCCCACTAT...GTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GAATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCTCCCCGATGTCCCGCTCTGCTGCCTCCTTaGTTTTATTCTTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSATSLKALPKPPPRCPALLPP*FYSSGR Trigger: CCTGCCTGAAGAATAAAACCAAGGAGGCAGCAGAGC...GGGACATCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACCGGCACAGCTCACTGTaGTCATTCTTGTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLWDVRSGNPQPPPLRHRHSSL*SFLFPQ Trigger: CTGTGGGAACAAGAATGACCACAGTGAGCTGTGCCG...GTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCTGCACGGAGATCTTATaGTGCAGTGCAGGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGTHLGPSVGCAQWESSACTEIL*CSAGLI Trigger: GATGAGCCCTGCACTGCACCATAAGATCTCCGTGCA...GGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCGCAGCTTGGCCATGCTaGACAGCACATAGAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: WAQGTHLGPSVGCAQWESAAWPC*TAHRTS Trigger: AGATGTTCTATGTGCTGTTCAGCATGGCCAAGCTGC...GGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCCCCCTCCCCGATGTCCCTCACCATGGGCAGCTCTaGTGCCTCCTTGGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: NPQPPPLRHCPSPLPDVPHHGQL*CLLGFI Trigger: AATAAAACCAAGGAGGCAGCAGAGCTGCCCATGGTG...AGGGACATCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GTATGGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTGATCTGGGGGACACCGGTATAGTGGGCGTGTACTaGTCCTCAAAGCGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VWRSLGVEPKGSDLGDTGIVGVY*SSKRPL Trigger: CAATGGCCGCTTTGAGGACCAGTACACGCCCACTAT...ACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCTGGTACATGTCCCCGTaGATGTTGTACACCTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTGYTPRALCGMCAVGILWYMSP*MLYTLR Trigger: TCGCAAGGTGTACAACATCCACGGGGACATGTACCA...GAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCTCCAGGATCTGTTTCTaGAGGCGCTTGACCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGYTPRALCGMCAVGILSRICF*RRLTSS Trigger: TGATGAGGTCAAGCGCCTCCAGAAACAGATCCTGGA...GAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCGCTCTGCTGCCTCCTTaGTTTTATTCTTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAQGTHLGPSVGCAQWESALLPP*FYSSGR Trigger: CCTGCCTGAAGAATAAAACCAAGGAGGCAGCAGAGC...GGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GTATGGAGGAGCCTGGGAGTGGAGCCAAAAGGCAGTGATCTGGGGGACACCGGTCGGCACAGCTCACTGTaGTCATTCTTGTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VWRSLGVEPKGSDLGDTGRHSSL*SFLFPQ Trigger: CTGTGGGAACAAGAATGACCACAGTGAGCTGTGCCG...ACCGGTGTCCCCCAGATCACTGCCTTTTGGCTCCACTCCCAGGCTCCTCCATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCATGCACGGAGATCTTATaGTGCAGTGCAGGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AQGTHLGPSVGCAQWESSCTEIL*CSAGLI Trigger: GATGAGCCCTGCACTGCACCATAAGATCTCCGTGCA...TGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGAGAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTCTTCAGGCAGGACTTaGCCTCCAGGATCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TREWAQGTHLGPSVGCAQSSGRT*PPGSVS Trigger: AGAAACAGATCCTGGAGGTCAAGTCCTGCCTGAAGA...CTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTCTCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGAGAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTCCAGGATCTGTTTCTaGAGGCGCTTGACCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TREWAQGTHLGPSVGCAQSRICF*RRLTSS Trigger: TGATGAGGTCAAGCGCCTCCAGAAACAGATCCTGGA...CTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTCTCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGTGTGGAGGTCAATGGATGACTTCTCTCCTTCCACCACATGGAACCCCGTCCCACAGATCACCATaGGCAGCTCTGCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WMCGGQWMTSLLPPHGTPSHRSP*AALLPP Trigger: AGGAGGCAGCAGAGCTGCCCATGGTGATCTGTGGGA...CGGGGTTCCATGTGGTGGAAGGAGAGAAGTCATCCATTGACCTCCACACATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| 3UTR CAA 72 bp | GCAGTAGAGCTTGACCGGATGGACCAGGCCATAGACTaGCCTGGACAAGTACCTGGTATACTCAGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVELDRMDQAID*PGQVPGILRTG Trigger: CCCAGTCCTGAGTATACCAGGTACTTGTCCAGGCAAGTCTATGGCCTGGTCCATCCGGTCAAGCTCTACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGTGTGGAGGTCAATGGATGACTTCTCTCCTTCCACCACATGGAACCCCGGTTTCTGGAGGCGCTTaGCCTCATCAAAGGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WMCGGQWMTSLLPPHGTPVSGGA*PHQRTP Trigger: GGGAGTCCTTTGATGAGGTCAAGCGCCTCCAGAAAC...CGGGGTTCCATGTGGTGGAAGGAGAGAAGTCATCCATTGACCTCCACACATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTAGACATGTCTCCGTCCTCCCACAAAGGAACCACACTCACGGCTCACAGGGCAGCTTGGCCATGCTaGACAGCACATAGAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLDMSPSSHKGTTLTAHRAAWPC*TAHRTS Trigger: AGATGTTCTATGTGCTGTTCAGCATGGCCAAGCTGC...CCTGTGAGCCGTGAGTGTGGTTCCTTTGTGGGAGGACGGAGACATGTCTAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| 3UTR CAA 72 bp | AGGGAGGGAGACCCCGGCCAAAGCAATGGATTTGAATaGGGAAGCCCGGTCAAAGACAAAGCATTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REGDPGQSNGFE*GSPVKDKALAS Trigger: AGAGGCCAATGCTTTGTCTTTGACCGGGCTTCCCAATTCAAATCCATTGCTTTGGCCGGGGTCTCCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR TCA 90 bp | AGCATTGGCCTCTTACAGTACAAGGACTTCATGTCTACTGCAAACAGAACAGGAGCGTCGGGCAAAGGGTaGGACCATGCCATAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SIGLLQYKDFMSTANRTGASGKG*DHAIGT Trigger: GGTGCCTATGGCATGGTCTCACCCTTTGCCCGACGC...TCCTGTTCTGTTTGCAGTAGACATGAAGTCCTTGTACTGTAAGAGGCCAATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS-3UTR GCA 90 bp | TTTGATGCAGGACTCCTGGCCTTTTTGCATCCCTCCCACGGAAAGCTTGTCTCGCACCATGGGCAGCTCTaGTGCCTCCTTGGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: FDAGLLAFLHPSHGKLVSHHGQL*CLLGFI Trigger: AATAAAACCAAGGAGGCAGCAGAGCTGCCCATGGTG...CGAGACAAGCTTTCCGTGGGAGGGATGCAAAAAGGCCAGGAGTCCTGCATCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
||
| CDS CCA 90 bp | AGCAGCTCAGCCTCCATGGCAGGGACCTGGCGGCACAGCTCACTGTaGTCATTCTTGTTCCCACAGATCACCATGGGCAGCTCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSASMAGTWRHSSL*SFLFPQITMGSSAA Trigger: GGCAGCAGAGCTGCCCATGGTGATCTGTGGGAACAAGAATGACCACAGTGAGCTGTGCCGCCAGGTCCCTGCCATGGAGGCTGAGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCGCAGGGAATGGGTGGTaGCCAGAGGTGTCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: QGTHLGPSVGCAQWESSAAGNGW*PEVSRI Trigger: TATCCTGGACACCTCTGGCAACCACCCATTCCCTGC...GGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTACTTGAGGTCACTGTaGACACTGGGGCGTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WAQGTHLGPSVGCAQWESYLRSL*TLGRRA Trigger: TGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTA...GGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | GAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAAGCAGGGAATGGGTGGTaGCCAGAGGTGTCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: EWAQGTHLGPSVGCAQWEAGNGW*PEVSRI Trigger: TATCCTGGACACCTCTGGCAACCACCCATTCCCTGC...TTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | TACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCTACTTGAGGTCACTGTaGACACTGGGGCGTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YTPRALCGMCAVGILSHLYLRSL*TLGRRA Trigger: TGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTA...GAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | GAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGTGGGAACCCTCCCGTAGGACCTaGGCCTTGATGTACTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EWAQGTHLGPSVGCAQWEPSRRT*ALMYLR Trigger: CCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGG...TTCCCACTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | TGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCTCCTCAAAGCGGCCATaGAGGAAGCGGGAGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: WDVRSGNPQPPPLRHCPSSSKRP*RKRETM Trigger: CATTGTCTCCCGCTTCCTCAATGGCCGCTTTGAGGA...GCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | TGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCATCTCATGGGGCAGCTaGGCCATGCTGAACAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WDVRSGNPQPPPLRHCPSISWGS*AMLNST Trigger: TGTGCTGTTCAGCATGGCCAAGCTGCCCCATGAGAT...GCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACCGTAGGACCTTGGCCTaGATGTACTTGAGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLWDVRSGNPQPPPLRHRRTLA*MYLRSL Trigger: CAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACG...GTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS TCA 90 bp | GATGTACTTGAGGTCACTGTTGACACTGGGGCGTCGGGCAAAGGGTaGGACCATGCCATAGGCACCTGCGACCTTAGTGCGACGCATGCA | + |
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Preference number: 5 (lower is better) Translates to: DVLEVTVDTGASGKG*DHAIGTCDLSATHA Trigger: TGCATGCGTCGCACTAAGGTCGCAGGTGCCTATGGCATGGTCTCACCCTTTGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS-3UTR CAA 90 bp | ACAAGAGAATGGGCACAGGGTACACACCTAGGGCCCTCTGTGGGATGTGCGCAGATCTCATGGGGCAGCTaGGCCATGCTGAACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TREWAQGTHLGPSVGCAQISWGS*AMLNST Trigger: TGTGCTGTTCAGCATGGCCAAGCTGCCCCATGAGAT...CTGCGCACATCCCACAGAGGGCCCTAGGTGTGTACCCTGTGCCCATTCTCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGTGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACTGCCGTAGGACCTTGGCCTaGATGTACTTGAGGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: PLWDVRSGNPQPPPLRHCRRTLA*MYLRSL Trigger: CAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACG...GCAGTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCACAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS-3UTR CAA 90 bp | TCCCTAGACATGTCTCCGTCCTCCCACAAAGGAACCACACTCACGGCTCACAGGCCCTCCCGTAGGACCTaGGCCTTGATGTACTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SLDMSPSSHKGTTLTAHRPSRRT*ALMYLR Trigger: CCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGG...CCTGTGAGCCGTGAGTGTGGTTCCTTTGTGGGAGGACGGAGACATGTCTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| CDS CCA 90 bp | TTTTCATCACCAGACACCAGCAGCTCAGCCTCCATGGCAGGGACCTaGCGGCACAGCTCACTGTGGTCATTCTTGTTCCCACAGATCACC | + |
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Preference number: 5 (lower is better) Translates to: FSSPDTSSSASMAGT*RHSSLWSFLFPQIT Trigger: GGTGATCTGTGGGAACAAGAATGACCACAGTGAGCTGTGCCGCCAGGTCCCTGCCATGGAGGCTGAGCTGCTGGTGTCTGGTGATGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS-3UTR CAA 90 bp | TGGGATGTGCGCAGTGGGAATCCTCAGCCACCTCCCTTAAGGCACTGCCCAAGCTTCTTCAGGCAGGACTaGACCTCCAGGATCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: WDVRSGNPQPPPLRHCPSFFRQD*TSRICF Trigger: GAAACAGATCCTGGAGGTCAAGTCCTGCCTGAAGAA...GCTTGGGCAGTGCCTTAAGGGAGGTGGCTGAGGATTCCCACTGCGCACATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS-3UTR CAA 90 bp | GTTAGAATCACTCTCTCAAAGCTCAGTCATCCTCTCCAGAGGGCAGGAGATTACTCCTCAAAGCGGCCATaGAGGAAGCGGGAGACAATG | + |
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Preference number: 5 (lower is better) Translates to: VRITLSKLSHPLQRAGDYSSKRP*RKRETM Trigger: CATTGTCTCCCGCTTCCTCAATGGCCGCTTTGAGGA...GTAATCTCCTGCCCTCTGGAGAGGATGACTGAGCTTTGAGAGAGTGATTCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139848.8 |
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| CDS CAA 72 bp | AAGCGGCCATTGAGGAAGCGGGAGACAATGGAGCTCTaGCCCACTCGGGAGGCACCCAGCACCACCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: KRPLRKRETMEL*PTREAPSTTMR Trigger: CCGCATGGTGGTGCTGGGTGCCTCCCGAGTGGGCAAGAGCTCCATTGTCTCCCGCTTCCTCAATGGCCGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 90 bp | CTCTCTCGGGCCTGGCCCTCCCGTAGGACCTTGGCCTTGATGTACTaGAGGTCACTGTTGACACTGGGGCGTCGGGCAAAGGGTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: LSRAWPSRRTLALMY*RSLLTLGRRAKGET Trigger: GGTCTCACCCTTTGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGGCCAGGCCCGAGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 90 bp | CACTTGTCCCTCTCTCGGGCCTGGCCCTCCCGTAGGACCTTGGCCTaGATGTACTTGAGGTCACTGTTGACACTGGGGCGTCGGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: HLSLSRAWPSRRTLA*MYLRSLLTLGRRAK Trigger: CTTTGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGGCCAGGCCCGAGAGAGGGACAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS TCA 72 bp | GAGGTCACTGTTGACACTGGGGCGTCGGGCAAAGGGTaGGACCATGCCATAGGCACCTGCGACCTTAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: EVTVDTGASGKG*DHAIGTCDLSA Trigger: CGCACTAAGGTCGCAGGTGCCTATGGCATGGTCTCACCCTTTGCCCGACGCCCCAGTGTCAACAGTGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CCA 72 bp | GCCTCCATGGCAGGGACCTGGCGGCACAGCTCACTGTaGTCATTCTTGTTCCCACAGATCACCATGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASMAGTWRHSSL*SFLFPQITMGS Trigger: GCTGCCCATGGTGATCTGTGGGAACAAGAATGACCACAGTGAGCTGTGCCGCCAGGTCCCTGCCATGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 72 bp | GCAGGGACCTGGCGGCACAGCTCACTGTGGTCATTCTaGTTCCCACAGATCACCATGGGCAGCTCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AGTWRHSSLWSF*FPQITMGSSAA Trigger: GGCAGCAGAGCTGCCCATGGTGATCTGTGGGAACAAGAATGACCACAGTGAGCTGTGCCGCCAGGTCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 72 bp | GCCTGGCCCTCCCGTAGGACCTTGGCCTTGATGTACTaGAGGTCACTGTTGACACTGGGGCGTCGGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AWPSRRTLALMY*RSLLTLGRRAK Trigger: CTTTGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGGCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 72 bp | CTCTCTCGGGCCTGGCCCTCCCGTAGGACCTTGGCCTaGATGTACTTGAGGTCACTGTTGACACTGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: LSRAWPSRRTLA*MYLRSLLTLGR Trigger: ACGCCCCAGTGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGGCCAGGCCCGAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS TCA 72 bp | GCGACCTTAGTGCGACGCATGCAGAAGGGCCGGGGGTaGAAAGCATCGCCGTACTGCACGGAGATCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: ATLVRRMQKGRG*KASPYCTEILW Trigger: CCATAAGATCTCCGTGCAGTACGGCGATGCTTTTCACCCCCGGCCCTTCTGCATGCGTCGCACTAAGGTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 72 bp | TCGATAGTGGGCGTGTACTGGTCCTCAAAGCGGCCATaGAGGAAGCGGGAGACAATGGAGCTCTTGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: SIVGVYWSSKRP*RKRETMELLPT Trigger: AGTGGGCAAGAGCTCCATTGTCTCCCGCTTCCTCAATGGCCGCTTTGAGGACCAGTACACGCCCACTATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 72 bp | CGTAGGACCTTGGCCTTGATGTACTTGAGGTCACTGTaGACACTGGGGCGTCGGGCAAAGGGTGAGACCATG | + |
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Preference number: 6 (lower is better) Translates to: RRTLALMYLRSL*TLGRRAKGETM Trigger: CATGGTCTCACCCTTTGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CCA 72 bp | TTCTTCAGGCAGGACTTGACCTCCAGGATCTGTTTCTaGAGGCGCTTGACCTCATCAAAGGACTCCCGGCTA | + |
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Preference number: 6 (lower is better) Translates to: FFRQDLTSRICF*RRLTSSKDSRL Trigger: TAGCCGGGAGTCCTTTGATGAGGTCAAGCGCCTCCAGAAACAGATCCTGGAGGTCAAGTCCTGCCTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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| CDS CAA 90 bp | TCATTCTTGTTCCCACAGATCACCATGGGCAGCTCTGCTGCCTCCTaGGTTTTATTCTTCAGGCAGGACTTGACCTCCAGGATCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SFLFPQITMGSSAAS*VLFFRQDLTSRICF Trigger: GAAACAGATCCTGGAGGTCAAGTCCTGCCTGAAGAATAAAACCAAGGAGGCAGCAGAGCTGCCCATGGTGATCTGTGGGAACAAGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132133.2 ENSMUST00000139848.8 |
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