Pregenerated sensors for RASA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031453Ensembl transcript IDs: ENSMUST00000117551.4, ENSMUST00000154454.8
Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCCAGCGTCACTGTGGCGTAAGGGTCACACTGCCCGTTCACAATaGGGAGACCCTGGCACTCGAAGATGCGTGCAGCGAGTTTGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: RPASLWRKGHTARSQ*GDPGTRRCVQRVCG Trigger: GCCACAAACTCGCTGCACGCATCTTCGAGTGCCAGGGTCTCCCCATTGTGAACGGGCAGTGTGACCCTTACGCCACAGTGACGCTGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR GCA 90 bp | TCCAGGTGGACCTTGCCCTGCACCTCTGAGTCTGCGTCCACGTGCTaGAGCTGGAACCATGTGTCCCTGTTGTGGTACCTCTGCAAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: SRWTLPCTSESASTC*SWNHVSLLWYLCKS Trigger: AGACTTGCAGAGGTACCACAACAGGGACACATGGTTCCAGCTGCAGCACGTGGACGCAGACTCAGAGGTGCAGGGCAAGGTCCACCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR GCA 90 bp | TACATGTGTACGGAGCCACAGAGACCAGCAGGCAAGGGACAAGAGTaGACACTGAAGAAGGTGCGCCCTGGCATGAACGAACCAGGCGTG | + |
|
Preference number: 1 (lower is better) Translates to: YMCTEPQRPAGKGQE*TLKKVRPGMNEPGV Trigger: CACGCCTGGTTCGTTCATGCCAGGGCGCACCTTCTTCAGTGTGCACTCTTGTCCCTTGCCTGCTGGTCTCTGTGGCTCCGTACACATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | GAGTCTGCGTCCACGTGCTGCAGCTGGAACCATGTGTCCCTGTTGTaGTACCTCTGCAAGTCTTCCTTCTGGATGGCCACCTTGCCTATG | + |
|
Preference number: 1 (lower is better) Translates to: ESASTCCSWNHVSLL*YLCKSSFWMATLPM Trigger: CATAGGCAAGGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACACATGGTTCCAGCTGCAGCACGTGGACGCAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR GCA 90 bp | TCCACGTGCTGCAGCTGGAACCATGTGTCCCTGTTGTGGTACCTCTaGAAGTCTTCCTTCTGGATGGCCACCTTGCCTATGATGGAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: STCCSWNHVSLLWYL*KSSFWMATLPMMES Trigger: GGACTCCATCATAGGCAAGGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACACATGGTTCCAGCTGCAGCACGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR CCA 90 bp | GGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTaGCCTTTATTGCTGCCGGTGCAGGCTCCATCTCAGAGCTATGTC | + |
|
Preference number: 1 (lower is better) Translates to: GLLGSQRHRHVEYHV*PLLLPVQAPSQSYV Trigger: GACATAGCTCTGAGATGGAGCCTGCACCGGCAGCAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | ACAATGGGGAGACCCTGGCACTCGAAGATGCGTGCAGCGAGTTTGTaGCAGACGACACCAGTGTCCGTAATGACCTCACTTAGTCTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: TMGRPWHSKMRAASL*QTTPVSVMTSLSLS Trigger: GCTGAGACTAAGTGAGGTCATTACGGACACTGGTGTCGTCTGCCACAAACTCGCTGCACGCATCTTCGAGTGCCAGGGTCTCCCCATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR CCA 90 bp | ACATTGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTaGAATACCACGTTTGGCCTTTATTGCTGCCGGTGCAGGCTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: TLACVACWAHRDTGM*NTTFGLYCCRCRLH Trigger: ATGGAGCCTGCACCGGCAGCAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | GACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTGGCATGTGTaGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGT | + |
|
Preference number: 1 (lower is better) Translates to: DPPTPIKSGSRHWHV*PVGLTETQACGIPR Trigger: ACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | CTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTaGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: LFQDPPTPIKSGSRH*HVWPVGLTETQACG Trigger: TCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR TCA 90 bp | GACTCGTGGTGGCCCCACCAGCTTGGTAGGACCCGTGTGAACGGGTaGACATGTTTCCTCTCCATGTATGCCTTCTGCCTTCTTTTATCT | + |
|
Preference number: 1 (lower is better) Translates to: DSWWPHQLGRTRVNG*TCFLSMYAFCLLLS Trigger: AGATAAAAGAAGGCAGAAGGCATACATGGAGAGGAAACATGTTCACCCGTTCACACGGGTCCTACCAAGCTGGTGGGGCCACCACGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR GCA 90 bp | AGCCAGGAACAAACCAACATAAGCTCAGGAGAAAGGCTGCCTGCCTaGTGGCTGCCAGGGAATACTGCTTCTCACGTTTCAGACAGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: SQEQTNISSGERLPA*WLPGNTASHVSDRD Trigger: ATCCCTGTCTGAAACGTGAGAAGCAGTATTCCCTGGCAGCCAGCAGGCAGGCAGCCTTTCTCCTGAGCTTATGTTGGTTTGTTCCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR TCA 90 bp | CAGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTaGGAAATCAAATACTGTTCCCTTTGGATTTCCCTGGGTCACCCC | + |
|
Preference number: 1 (lower is better) Translates to: QAPSQSYVPEDPLAL*EIKYCSLWISLGHP Trigger: GGGGTGACCCAGGGAAATCCAAAGGGAACAGTATTTGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | CACCCCAATCAAAAGTGGTTCCAGACATTGGCATGTGTGGCCTGTTaGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: HPNQKWFQTLACVAC*AHRDTGMWNTTFGL Trigger: AAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | TCAGCCTCTGGAAATGCAGTTTGGCATAAGGCTCCAGCAGTACTGTaGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGTTTCAGGACCCT | + |
|
Preference number: 1 (lower is better) Translates to: SASGNAVWHKAPAVL*GLSWYSLSCLFQDP Trigger: AGGGTCCTGAAACAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATGCCAAACTGCATTTCCAGAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 90 bp | TCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTaGGAATCCAAACCACTCCACAGAAAGAATAAAACATCTGCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: SATLPVGNLLYIAPL*ESKPLHRKNKTSAL Trigger: TAAAGCAGATGTTTTATTCTTTCTGTGGAGTGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGACCTTGCCCTGCACCTCTGAGTCTGCGTCCACGTGCTGCAGCTGGAACCATGTCCCTCATCTTGTTTaGCCCCGGGTAGGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: WTLPCTSESASTCCSWNHVPHLV*PRVGRK Trigger: CTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGAC...ATGGTTCCAGCTGCAGCACGTGGACGCAGACTCAGAGGTGCAGGGCAAGGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGACCTTGCCCTGCACCTCTGAGTCTGCGTCCACGTGCTGCAGCTGGAACCATGGTCCAGGTTCACAGTaGAGTAGCAGTCCCTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: WTLPCTSESASTCCSWNHGPGSQ*SSSPSS Trigger: AGATGAGGGACTGCTACTGCACTGTGAACCTGGACC...ATGGTTCCAGCTGCAGCACGTGGACGCAGACTCAGAGGTGCAGGGCAAGGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGGAGACCCTGGCACTCGAAGATGCGTGCAGCGAGTTTGTGGCAGACGACTCCACGTGCTGCAGCTaGAACCATGTGTCCCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NGETLALEDACSEFVADDSTCCS*NHVSLL Trigger: CAACAGGGACACATGGTTCCAGCTGCAGCACGTGGA...GTCGTCTGCCACAAACTCGCTGCACGCATCTTCGAGTGCCAGGGTCTCCCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR CAA 90 bp | TCTGAGTCTGCGTCCACGTGCTGCAGCTGGAACCATGTGTCCCTGTaGTGGTACCTCTGCAAGTCTTCCTTCTGGATGGCCACCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SESASTCCSWNHVSL*WYLCKSSFWMATLP Trigger: AGGCAAGGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACACATGGTTCCAGCTGCAGCACGTGGACGCAGACTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTGAAGGGGGACCGGGCTaGGAGGGAACAGGTTTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: WPVGLTETQACGIPRLAFEGGPG*EGTGLD Trigger: GTCTAAACCTGTTCCCTCGCAGCCCGGTCCCCCTTC...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR GCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGAGGAGAAAGGCTGCCTaGCTGCTGGCTGCCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLRRKAA*LLAARE Trigger: TTCCCTGGCAGCCAGCAGGCAGGCAGCCTTTCTCCT...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCAGCTCAGGAGAAAGGCTaGCTGCCTGCTGGCTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSAQEKG*LPAGCQ Trigger: CTGGCAGCCAGCAGGCAGGCAGCCTTTCTCCTGAGC...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCGAAGATGCGTGCAGCGAGTTTGTGGCAGACGACACCAGTGTCCGTAATGAGTCTGCGTCCACGTaGTGCAGCTGGAACCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: ALEDACSEFVADDTSVRNESAST*CSWNHV Trigger: CACATGGTTCCAGCTGCAGCACGTGGACGCAGACTC...ATTACGGACACTGGTGTCGTCTGCCACAAACTCGCTGCACGCATCTTCGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTGAAAGGCTGCCTGCCTaGTGGCTGCCAGGGAATACT | + |
|
Preference number: 2 (lower is better) Translates to: WPVGLTETQACGIPRLAFERLPA*WLPGNT Trigger: AGTATTCCCTGGCAGCCAGCAGGCAGGCAGCCTTTC...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR GCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCATCTGCCCATAGAGTaGCCCTCTCTCAGCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QPPLSATLPVGNLLYIAPHLPIE*PSLSLW Trigger: CCAGAGGCTGAGAGAGGGGCACTCTATGGGCAGATG...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCATCACCCAGAGAAGACTaGGCTCACAGCCCTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TLPVGNLLYIAPLWESKPSPRED*AHSPPS Trigger: AGAGGGAGGGCTGTGAGCCCAGTCTTCTCTGGGTGA...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTaGGCCTTTATTGCTGCCGGTGCAGGCTCCATCTCAGAGCTATGT | + |
|
Preference number: 2 (lower is better) Translates to: WPVGLTETQACGIPR*AFIAAGAGSISELC Trigger: ACATAGCTCTGAGATGGAGCCTGCACCGGCAGCAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 90 bp | TCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATaGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SVSGPSHPNQKWFQT*ACVACWAHRDTGMW Trigger: CCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 90 bp | CCTCCTGGTCCAGGTTCACAGTGCAGTAGCAGTCCCTCATCTTGTTaGGCCCCGGGTAGGAAGGAAGATTCTTGGCTTCACCTAGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: PPGPGSQCSSSPSSC*APGRKEDSWLHLEV Trigger: GACTTCTAGGTGAAGCCAAGAATCTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGACTGCTACTGCACTGTGAACCTGGACCAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCACCAGGCAACAGTTCCTaGCGGGGAAGAGCATGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSPGNSS*RGRACL Trigger: CAAGCATGCTCTTCCCCGGCAGGAACTGTTGCCTGG...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCGCTCCAGCAGTACTGTaGGGGCTAAGCTGGTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QPPLSATLPVGNLLYIAPAPAVL*GLSWYS Trigger: ACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGC...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTGTCCCTGTTGTGGTACCTCTGCAAGTCTTCCTTCTGGATGGCCACCTTCGGAAAACCTCCTCCTaGTCCAGGTTCACAGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PCVPVVVPLQVFLLDGHLRKTSS*SRFTVQ Trigger: CTGCACTGTGAACCTGGACCAGGAGGAGGTTTTCCG...AAGGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR GCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCGGCAAGGGACAAGAGTaGACACTGAAGAAGGTGCGC | + |
|
Preference number: 2 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFGKGQE*TLKKVR Trigger: GCGCACCTTCTTCAGTGTGCACTCTTGTCCCTTGCC...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCTCCTGGTCCAGGTTCACAGTGCAGTAGCAGTCCCTCATCTTGTTTGGCCAGGAAGGAAGATTCTTaGCTTCACCTAGAAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PPPGPGSQCSSSPSSCLARKEDS*LHLEVQ Trigger: CTGGACTTCTAGGTGAAGCCAAGAATCTTCCTTCCT...GGCCAAACAAGATGAGGGACTGCTACTGCACTGTGAACCTGGACCAGGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCTGCCTGCCTGCTGGCTaGCAGGGAATACTGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PPNKNEEKRVPECVVVSFCLPAG*QGILLL Trigger: GAGAAGCAGTATTCCCTGGCAGCCAGCAGGCAGGCA...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | GCACTCGAAGATGCGTGCAGCGAGTTTGTGGCAGACGACACCAGTGTCCGTAATACTTCTCGACAATTTTaGTCCGGAAAACCTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ALEDACSEFVADDTSVRNTSRQF*SGKPPP Trigger: AGGAGGAGGTTTTCCGGACCAAAATTGTCGAGAAGT...ATTACGGACACTGGTGTCGTCTGCCACAAACTCGCTGCACGCATCTTCGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCATCCCAGCCACAAAAATaGCCCTTTAGCCAGGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSSQPQK*PFSQEQ Trigger: TTGTTCCTGGCTAAAGGGTCATTTTTGTGGCTGGGA...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAAATGCACAGCCTTTAAAAATCTTTCCCAGACTTTCATCGAGGCAGCAAGCCGGCTCAGACCACCTGTaGTGGCAGCTAAGGGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KNAQPLKIFPRLSSRQQAGSDHL*WQLRGV Trigger: CACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC...GGCTTGCTGCCTCGATGAAAGTCTGGGAAAGATTTTTAAAGGCTGTGCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGTACCAGAATGTGTGGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTGCGCTGCCAGGGAATACTaGTTCTCACGTTTCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: KGTRMCGCVLQQHLPIECAAREY*FSRFRQ Trigger: CTGTCTGAAACGTGAGAAGCAGTATTCCCTGGCAGC...GCACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCTCCCCGAGGACCCTTTaGCTTTGTGAGAAATCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: QPPLSATLPVGNLLYIAPSPRTL*LCEKSN Trigger: ATTTGATTTCTCACAAAGCCAAAGGGTCCTCGGGGA...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGAAATACTGTTCCCTTTaGATTTCCCTGGGTCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLKYCSL*ISLGHP Trigger: GGGGTGACCCAGGGAAATCCAAAGGGAACAGTATTT...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGGGATCCCCATACAACTaGAGGAGTAGAAAGACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLGSPYN*RSRKTD Trigger: ATCTGTCTTTCTACTCCTTCAGTTGTATGGGGATCC...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTAATGCACATAGATGCTaGTATTCCACACTGCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: WPVGLTETQACGIPRLAFNAHRC*YSTLPY Trigger: ATAAGGCAGTGTGGAATACCAGCATCTATGTGCATT...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 90 bp | TCTTTCCCAGACTTTCATCGAGGCAGCAAGCCTGTGGATTCTAGTTaGAAACCTTATCCAACATCCAGACCTGTGTTTGAACTGAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SFPDFHRGSKPVDSS*KPYPTSRPVFELRG Trigger: ACCCCTCAGTTCAAACACAGGTCTGGATGTTGGATAAGGTTTCAAACTAGAATCCACAGGCTTGCTGCCTCGATGAAAGTCTGGGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCTAATGCACATAGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTAGCATACATTCCAGGATaGCTCAGACCACCTGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PPNAHRCWYSTLPYIKMLAYIPG*LRPPVL Trigger: CAGCACAGGTGGTCTGAGCCATCCTGGAATGTATGC...TAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCTATGTGCATTAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGCTGTGGATTCTAGTTTaGAACCTTATCCAACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLLWILV*NLIQHP Trigger: TGGATGTTGGATAAGGTTTCAAACTAGAATCCACAG...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | CAGTTCCTGCCGGGGAAGAGCATGCTTGACTCGTGGTaGCCCCACCAGCTTGGTAGGACCCGTGTGAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: QFLPGKSMLDSW*PHQLGRTRVNG Trigger: CCCGTTCACACGGGTCCTACCAAGCTGGTGGGGCCACCACGAGTCAAGCATGCTCTTCCCCGGCAGGAACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | CAACAGTTCCTGCCGGGGAAGAGCATGCTTGACTCGTaGTGGCCCCACCAGCTTGGTAGGACCCGTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QQFLPGKSMLDS*WPHQLGRTRVN Trigger: GTTCACACGGGTCCTACCAAGCTGGTGGGGCCACCACGAGTCAAGCATGCTCTTCCCCGGCAGGAACTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR GCA 72 bp | ACCTTGCCCTGCACCTCTGAGTCTGCGTCCACGTGCTaGAGCTGGAACCATGTGTCCCTGTTGTGGTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLPCTSESASTC*SWNHVSLLWYL Trigger: GAGGTACCACAACAGGGACACATGGTTCCAGCTGCAGCACGTGGACGCAGACTCAGAGGTGCAGGGCAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR CCA 72 bp | TCACTGTGGCGTAAGGGTCACACTGCCCGTTCACAATaGGGAGACCCTGGCACTCGAAGATGCGTGCAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: SLWRKGHTARSQ*GDPGTRRCVQR Trigger: TCGCTGCACGCATCTTCGAGTGCCAGGGTCTCCCCATTGTGAACGGGCAGTGTGACCCTTACGCCACAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCCGGCCAGCGTCACTGTGGCGTAAGGGTCACACTGCCCGTTCACAATGGGAACCATGTGTCCCTGTaGTGGTACCTCTGCAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSGQRHCGVRVTLPVHNGNHVSL*WYLCKS Trigger: AGACTTGCAGAGGTACCACAACAGGGACACATGGTT...CCCATTGTGAACGGGCAGTGTGACCCTTACGCCACAGTGACGCTGGCCGGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR GCA 72 bp | GATGAGCATACATTCCAGGATGGCTCAGACCACCTGTaGTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: DEHTFQDGSDHL*WQLRGVHSPGN Trigger: GTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCCATCCTGGAATGTATGCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR GCA 72 bp | GCAGGATTGCGTGTACGTCTAAGGCTAGGGCCAGACTaGTACATGTGTACGGAGCCACAGAGACCAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGLRVRLRLGPD*YMCTEPQRPAG Trigger: GCCTGCTGGTCTCTGTGGCTCCGTACACATGTAGCAGTCTGGCCCTAGCCTTAGACGTACACGCAATCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR GCA 72 bp | TGGTCCGGAAAACCTCCTCCTGGTCCAGGTTCACAGTaGAGTAGCAGTCCCTCATCTTGTTTGGCCCCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WSGKPPPGPGSQ*SSSPSSCLAPG Trigger: ACCCGGGGCCAAACAAGATGAGGGACTGCTACTGCACTGTGAACCTGGACCAGGAGGAGGTTTTCCGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR TCA 72 bp | ACTCGTGGTGGCCCCACCAGCTTGGTAGGACCCGTGTaGACGGGTGAACATGTTTCCTCTCCATGTATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRGGPTSLVGPV*TGEHVSSPCMP Trigger: AGGCATACATGGAGAGGAAACATGTTCACCCGTTCACACGGGTCCTACCAAGCTGGTGGGGCCACCACGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR GCA 72 bp | ACGAACCAGGCGTGCCTTTGTGAAGGGGGACCGGGCTaGGAGGGAACAGGTTTAGACAAAGTCCATACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TNQACLCEGGPG*EGTGLDKVHTS Trigger: GGAAGTATGGACTTTGTCTAAACCTGTTCCCTCGCAGCCCGGTCCCCCTTCACAAAGGCACGCCTGGTTCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR GCA 72 bp | AGAAAGGCTGCCTGCCTGCTGGCTGCCAGGGAATACTaGTTCTCACGTTTCAGACAGGGATTCCGTGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: RKAACLLAAREY*FSRFRQGFRGT Trigger: CGTTCCACGGAATCCCTGTCTGAAACGTGAGAAGCAGTATTCCCTGGCAGCCAGCAGGCAGGCAGCCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | TCCACGTGCTGCAGCTGGAACCATGTGTCCCTGTTGTaGTACCTCTGCAAGTCTTCCTTCTGGATGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: STCCSWNHVSLL*YLCKSSFWMAT Trigger: GGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACACATGGTTCCAGCTGCAGCACGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR TCA 72 bp | TGGCCCCACCAGCTTGGTAGGACCCGTGTGAACGGGTaGACATGTTTCCTCTCCATGTATGCCTTCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: WPHQLGRTRVNG*TCFLSMYAFCL Trigger: AAGGCAGAAGGCATACATGGAGAGGAAACATGTTCACCCGTTCACACGGGTCCTACCAAGCTGGTGGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | GGCTCACAGAGACACAGGCATGTGGAATACCACGTTTaGCCTTTATTGCTGCCGGTGCAGGCTCCATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSQRHRHVEYHV*PLLLPVQAPSQ Trigger: CTGAGATGGAGCCTGCACCGGCAGCAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | GACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTaGCATGTGTGGCCTGTTGGGCTCACAGAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: DPPTPIKSGSRH*HVWPVGLTETQ Trigger: CTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | TGGCATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTaGTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: WHKAPAVLWGLS*YSLSCLFQDPP Trigger: GGGAGGGTCCTGAAACAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | GTGTCCCTGTTGTGGTACCTCTGCAAGTCTTCCTTCTaGATGGCCACCTTGCCTATGATGGAGTCCCTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: VSLLWYLCKSSF*MATLPMMESLR Trigger: CCGAAGGGACTCCATCATAGGCAAGGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR GCA 72 bp | TGCAGCTGGAACCATGTGTCCCTGTTGTGGTACCTCTaGAAGTCTTCCTTCTGGATGGCCACCTTGCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: CSWNHVSLLWYL*KSSFWMATLPM Trigger: CATAGGCAAGGTGGCCATCCAGAAGGAAGACTTGCAGAGGTACCACAACAGGGACACATGGTTCCAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR CCA 72 bp | ACCAACATAAGCTCAGGAGAAAGGCTGCCTGCCTGCTaGCTGCCAGGGAATACTGCTTCTCACGTTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TNISSGERLPAC*LPGNTASHVSD Trigger: GTCTGAAACGTGAGAAGCAGTATTCCCTGGCAGCCAGCAGGCAGGCAGCCTTTCTCCTGAGCTTATGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | CAGGTTCACAGTGCAGTAGCAGTCCCTCATCTTGTTTaGCCCCGGGTAGGAAGGAAGATTCTTGGCTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: QVHSAVAVPHLV*PRVGRKILGFT Trigger: GGTGAAGCCAAGAATCTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGACTGCTACTGCACTGTGAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| 3UTR GCA 72 bp | CAAACCAACATAAGCTCAGGAGAAAGGCTGCCTGCCTaGTGGCTGCCAGGGAATACTGCTTCTCACGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTNISSGERLPA*WLPGNTASHVS Trigger: TGAAACGTGAGAAGCAGTATTCCCTGGCAGCCAGCAGGCAGGCAGCCTTTCTCCTGAGCTTATGTTGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | ACCCCAATCAAAAGTGGTTCCAGACATTGGCATGTGTaGCCTGTTGGGCTCACAGAGACACAGGCATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TPIKSGSRHWHV*PVGLTETQACG Trigger: TCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | TTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTaGTTCCAGACATTGGCATGTGTGGCCTGTTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSVSGPSHPNQK*FQTLACVACWA Trigger: AGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTaGCTTTGTGAGAAATCAAATACTGTTCCCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLHLRAMSPRTL*LCEKSNTVPFG Trigger: TCCAAAGGGAACAGTATTTGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | CTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTaGGAATCCAAACCACTCCACAGAAAGAATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LPVGNLLYIAPL*ESKPLHRKNKT Trigger: TGTTTTATTCTTTCTGTGGAGTGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR TCA 72 bp | AAGAAGTTCAGTACAAGGGGCCTGCTGTGTCCAAACTaGCTTTTGTTTCCATCCTCTGCTACTATGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KKFSTRGLLCPN*LLFPSSATMGS Trigger: AGAACCCATAGTAGCAGAGGATGGAAACAAAAGTCAGTTTGGACACAGCAGGCCCCTTGTACTGAACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CCA 72 bp | CCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTaGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PTRMKRKGYQNV*LCPSATSAHRV Trigger: CACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCTAATGCACATAGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTACCTGTGGATTCTAGTTaGAAACCTTATCCAACATCC | + |
|
Preference number: 3 (lower is better) Translates to: PPNAHRCWYSTLPYIKMLPVDSS*KPYPTS Trigger: GGATGTTGGATAAGGTTTCAAACTAGAATCCACAGG...TAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCTATGTGCATTAGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGACCACCTGTGCTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAACAGTGCCAGCAGCCGTGTCTaGGGAGGCCCTGCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSDHLCWQLRGVHSPGNSASSRV*GGPAAE Trigger: CTCTGCTGCAGGGCCTCCTCAGACACGGCTGCTGGC...ACTGTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 72 bp | AGCCCAGGCAACAGTTCCTGCCGGGGAAGAGCATGCTaGACTCGTGGTGGCCCCACCAGCTTGGTAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGNSSCRGRAC*TRGGPTSLVGP Trigger: GGGTCCTACCAAGCTGGTGGGGCCACCACGAGTCAAGCATGCTCTTCCCCGGCAGGAACTGTTGCCTGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | GGCTCAGACCACCTGTGCTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAACAGTTCTGCGTCCACGTGCTaGAGCTGGAACCATGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSDHLCWQLRGVHSPGNSSASTC*SWNHVS Trigger: GGACACATGGTTCCAGCTGCAGCACGTGGACGCAGA...ACTGTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | GGCTCAGACCACCTGTGCTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAACAGTCGTCATACACAGACTTaGTGCCGCAGGCCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSDHLCWQLRGVHSPGNSRHTQT*CRRPPA Trigger: TGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACG...ACTGTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCCGGGAGCCCACCAGTaGAGGGAGTGCAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLSATLPVGNLLYIAPPGAHQ*RECSQQ Trigger: CTGCTGGCTGCACTCCCTGCACTGGTGGGCTCCCGG...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGACCACCTGTGCTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAACAGTGGCAGATCTCCTCAATaGTGGGCTTCAGGGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSDHLCWQLRGVHSPGNSGRSPQ*WASGSH Trigger: ATGTGACCCTGAAGCCCACCATTGAGGAGATCTGCC...ACTGTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TTCCAGACATTGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGTGTCCAGCTGGATGTTaGCCGGGAGCCCACCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQTLACVACWAHRDTGMWCPAGC*PGAHQC Trigger: GCACTGGTGGGCTCCCGGCCAACATCCAGCTGGACA...CCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGACCACCTGTGCTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAACAGTATCTCACAGGACTTGTaGCTCTGGCAGATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSDHLCWQLRGVHSPGNSISQDL*LWQISS Trigger: TGAGGAGATCTGCCAGAGCCACAAGTCCTGTGAGAT...ACTGTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 72 bp | GGGAGACCCTGGCACTCGAAGATGCGTGCAGCGAGTTaGTGGCAGACGACACCAGTGTCCGTAATGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPWHSKMRAAS*WQTTPVSVMTS Trigger: TGAGGTCATTACGGACACTGGTGTCGTCTGCCACAAACTCGCTGCACGCATCTTCGAGTGCCAGGGTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| CDS-3UTR GCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCAGGTGGACCTTGCCCTaGACCTCTGAGTCTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPLSATLPVGNLLYIAPRWTLP*TSESAS Trigger: GGACGCAGACTCAGAGGTGCAGGGCAAGGTCCACCT...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TTCCAGACATTGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGACTGCCCGTTCACAATaGGGAGACCCTGGCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FQTLACVACWAHRDTGMWTARSQ*GDPGTR Trigger: TCGAGTGCCAGGGTCTCCCCATTGTGAACGGGCAGT...CCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCACGGCCAGCGTCACTGTaGCGTAAGGGTCACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSRPASL*RKGHTA Trigger: GGCAGTGTGACCCTTACGCCACAGTGACGCTGGCCG...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCACCTGGGGGTCGTCGATaGCGAACGTTGAGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPVGNLLYIAPLWESKPPGGRR*RTLSTP Trigger: AGGAGTACTCAACGTTCGTCATCGACGACCCCCAGG...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGGGATGGGCTGCTCTATaGTCTTGGGGTCCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLGWAAL*SWGPFS Trigger: GGAGAAGGGACCCCAAGAGCATAGAGCAGCCCATCC...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGCGTGCAGCGAGTTTGTaGCAGACGACACCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLRAASL*QTTPVS Trigger: GGACACTGGTGTCGTCTGCCACAAACTCGCTGCACG...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGCCGTTGTCTCGGGGCTaGAGGAAGTACCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLPLSRG*RKYQAS Trigger: TGAAGCCTGGTACTTCCTCCAGCCCCGAGACAACGG...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCATCTTGGAAGCGCTTaGCAGCCGCCTCCCGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFHLGSA*QPPPAR Trigger: CCTTGCGGGAGGCGGCTGCCAAGCGCTTCCAAGATG...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCACCATCAATGTCCAGCTaGATGTTGGCCGGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLPVGNLLYIAPLWESKPPSMSS*MLAGSP Trigger: TGGGCTCCCGGCCAACATCCAGCTGGACATTGATGG...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 72 bp | GGGCTCACAGAGACACAGGCATGTGGAATACCACGTTaGGCCTTTATTGCTGCCGGTGCAGGCTCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLTETQACGIPR*AFIAAGAGSIS Trigger: TGAGATGGAGCCTGCACCGGCAGCAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 72 bp | GGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATaGGCATGTGTGGCCTGTTGGGCTCACAGAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: GPSHPNQKWFQT*ACVACWAHRDT Trigger: TGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGACGGGTGGAAGACGGTaGGCCGCTTCTGGTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLTGGRR*AASGCT Trigger: AGTGCAACCAGAAGCGGCTCACCGTCTTCCACCCGT...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCGTCGATGACGAACGTTaGGTACTCCTCCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLSATLPVGNLLYIAPVDDER*VLLLLR Trigger: CCTGAGCAGGAGGAGTACTCAACGTTCGTCATCGAC...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCTCCCCACCCCAGCGATaGCCTGCTTCAGCGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFSPPQR*PASASC Trigger: ACAAGACGCTGAAGCAGGTCATCGCTGGGGTGGGGA...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGGCACTCGAAGATGCGTaGAGCGAGTTTGTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLALEDA*SEFVAD Trigger: GTCTGCCACAAACTCGCTGCACGCATCTTCGAGTGC...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | ATGTGTACGGAGCCACAGAGACCAGCAGGCAAGGGACAAGAGTGCACACTGAAGCCCCAAACTTCAGGTTaGTGGCGTTCCAGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MCTEPQRPAGKGQECTLKPQTSG*WRSRGQ Trigger: TTGACCTCTGGAACGCCAGCAACCTGAAGTTTGGGG...CTTCAGTGTGCACTCTTGTCCCTTGCCTGCTGGTCTCTGTGGCTCCGTACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGGGGATGGCTGCCTCTTaGTTGTCTCTGCACACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLGMAAS*LSLHTS Trigger: TGAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCC...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGGCTGCTCTATGCTCTTaGGGTCCCTTCTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLAALCS*GPFSPR Trigger: CCTCGGGGAGAAGGGACCCCAAGAGCATAGAGCAGC...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TTCCAGACATTGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAGGGCACGCTCTGGCTaGATGACCTGGAACATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQTLACVACWAHRDTGMWRARSG*MTWNMF Trigger: AAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCT...CCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTGTACAGGGCACGCTCTaGCTGGATGACCTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: WPVGLTETQACGIPRLAFVQGTL*LDDLEH Trigger: ATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTAC...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | ATGTGTACGGAGCCACAGAGACCAGCAGGCAAGGGACAAGAGTGCACACTGAAGTGTCGATCCAGTCCTTaGCCTCCACACAGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MCTEPQRPAGKGQECTLKCRSSP*PPHSCW Trigger: CCAACAACTGTGTGGAGGCCAAGGACTGGATCGACA...CTTCAGTGTGCACTCTTGTCCCTTGCCTGCTGGTCTCTGTGGCTCCGTACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCAACGGTGAGCCGCTTCTaGTTGCACTGGCTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPVGNLLYIAPLWESKPTVSRF*LHWLTL Trigger: CAAAGTGAGCCAGTGCAACCAGAAGCGGCTCACCGT...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 72 bp | CCATGCTTCCAGGAACGCCACCTGTCTGGTCTGACATaGATGCCAACCACCTTTATCTGCCACCCTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCFQERHLSGLT*MPTTFICHPTC Trigger: ACAGGTAGGGTGGCAGATAAAGGTGGTTGGCATCAATGTCAGACCAGACAGGTGGCGTTCCTGGAAGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| 3UTR CAA 72 bp | CCAGGTTCACAGTGCAGTAGCAGTCCCTCATCTTGTTaGGCCCCGGGTAGGAAGGAAGATTCTTGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGSQCSSSPSSC*APGRKEDSWLH Trigger: GTGAAGCCAAGAATCTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGACTGCTACTGCACTGTGAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGACATTGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGCACGCTCTGGCTGGATaGCCTGGAACATGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQTLACVACWAHRDTGMWHALAG*PGTCFS Trigger: TGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTG...CCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGGAGTCTGCGTCCACGTaGTGCAGCTGGAACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLESAST*CSWNHV Trigger: CACATGGTTCCAGCTGCAGCACGTGGACGCAGACTC...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTTTAAGCAGGATGGGCTaGTCTATGCTCTTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WPVGLTETQACGIPRLAFLSRMG*SMLLGS Trigger: GGACCCCAAGAGCATAGAGCAGCCCATCCTGCTTAA...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCAAGTTTCCTCGGAAGATaGTATTGGGGTCCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPVGNLLYIAPLWESKPSFLGR*YWGPGS Trigger: GGACCCAGGACCCCAATACCATCTTCCGAGGAAACT...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCTGGACTTGGACAAGCTaGCGAGGGTCTGGATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFWTWTS*RGSGSS Trigger: AGACGATCCAGACCCTCGGCAGCTTGTCCAAGTCCA...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGGTCCCTCATCTTGTTTaGCCCCGGGTAGGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLVPHLV*PRVGRK Trigger: CTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGAC...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTACCAGAATGTGTGGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTGCCGGAAAACCTCCTCCTaGTCCAGGTTCACAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGTRMCGCVLQQHLPIECRKTSS*SRFTVQ Trigger: CTGCACTGTGAACCTGGACCAGGAGGAGGTTTTCCG...GCACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCTGCAAGTCTTCCTTCTaGATGGCCACCTTGCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLSATLPVGNLLYIAPCKSSF*MATLPM Trigger: CATAGGCAAGGTGGCCATCCAGAAGGAAGACTTGCA...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGAGACCCCAAGTCATCTaGCTTCAGGCTCTTATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLRPQVI*LQALIA Trigger: GGCAATAAGAGCCTGAAGCCAGATGACTTGGGGTCT...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCATGGTATTGGGGTCCTaGGTCCTCTTCACCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFMVLGS*VLFTSA Trigger: CGCAGAGGTGAAGAGGACCCAGGACCCCAATACCAT...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCCAATAGGGTGCTCCTaGCTCCCGTATCTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFPIGCS*LPYLVF Trigger: GAAGACGAGATACGGGAGCCAGGAGCACCCTATTGG...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCATGGCTTCACCAATCTTaGTCCTCACGCTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSWLHQS*SSRSGR Trigger: TCTTCCAGAGCGTGAGGATCAAGATTGGTGAAGCCA...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTGGCATAGTGTCGCAGAATCTTaGGAGGAAGCCTCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLFQDPPTPIKSGSRHWHSVAES*EEASVP Trigger: GGGAACTGAGGCTTCCTCTCAAGATTCTGCGACACT...ATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCAGCACTTGGATGTCAGTaGGTTTCCTCGGAAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSALGCQ*VSSEDG Trigger: ACCATCTTCCGAGGAAACTCACTGACATCCAAGTGC...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCACTTTTTGCTGTAGCTaGAGGGTCTGGTCACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPPLSATLPVGNLLYIAPTFCCS*RVWSPQ Trigger: TTGAGGTGACCAGACCCTGCAGCTACAGCAAAAAGT...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CCCATGTCCTCTAAGATAAAGGAGTTTCTGTACCATCCTGTCCATCCCAGCCACCCTCTTGCTTGTCTCTaGACACCTCACCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PMSSKIKEFLYHPVHPSHPLACL*TPHPGC Trigger: ACATCCTGGGTGAGGTGTGCAGAGACAAGCAAGAGG...GTGGCTGGGATGGACAGGATGGTACAGAAACTCCTTTATCTTAGAGGACATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCAACCGTTTCCTTCCCTaGGCCCGCTTGATCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFNRFLP*ARLIMN Trigger: GTTCATGATCAAGCGGGCCCAGGGAAGGAAACGGTT...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTACCAGAATGTGTGGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTGCCGCTTCTGGTTGCACTaGCTCACTTTGGTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGTRMCGCVLQQHLPIECRFWLH*LTLVRM Trigger: CATCCTCACCAAAGTGAGCCAGTGCAACCAGAAGCG...GCACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCACACCTTCGTTTTCTTTaGTTCAGACCTGAAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSHLRFL*FRPEGS Trigger: GGACCCTTCAGGTCTGAAGCAAAGAAAACGAAGGTG...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTGGCATCAAAGTGGGACTTTTTaGTGTAGCTGCAGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFQDPPTPIKSGSRHWHQSGTF*CSCRVW Trigger: CCAGACCCTGCAGCTACAGCAAAAAGTCCCACTTTG...ATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGATGCGATCCACATACTaGCTCAGGCTCTCCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLMRSTY*LRLSML Trigger: CAACATGGAGAGCCTGAGGCAGTATGTGGATCGCAT...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CCCATGTCCTCTAAGATAAAGGAGTTTCTGTACCATCCTGTCCATCCCAGCCACAGATCTCCTCAATGGTaGGCTTCAGGGTCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PMSSKIKEFLYHPVHPSHRSPQW*ASGSHG Trigger: TCCATGTGACCCTGAAGCCCACCATTGAGGAGATCT...GTGGCTGGGATGGACAGGATGGTACAGAAACTCCTTTATCTTAGAGGACATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCGGTCCAGGTTCACAGTaGAGTAGCAGTCCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PPNKNEEKRVPECVVVSFGPGSQ*SSSPSS Trigger: AGATGAGGGACTGCTACTGCACTGTGAACCTGGACC...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCGTTGAGTACTCCTCCTaGTCAGGGCCGTCATACACA | + |
|
Preference number: 4 (lower is better) Translates to: PPNKNEEKRVPECVVVSFVEYSS*SGPSYT Trigger: TGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAAC...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCACACAGTTGTTGGCCTaGATGTACAGGGCACGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPNKNEEKRVPECVVVSFTQLLA*MYRARS Trigger: AGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGT...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | TTCCAGACATTGGCATGTGTGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGCATACTTCTGCTCATTaGAGAATTCATAGAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FQTLACVACWAHRDTGMWHTSAH*RIHRMS Trigger: CGACATTCTATGAATTCTTCAATGAGCAGAAGTATG...CCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCACACATGCCAATGTCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCAGAAACCACCTCTTCTTaGAATTCTTCATTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TLPVGNLLYIAPLWESKPETTSS*NSSFQT Trigger: GGTTTGGAATGAAGAATTTCAAGAAGAGGTGGTTTC...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CCCCCTAATGCACATAGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTAGGTCCTCTTCACCTCTaGGCTAGCGATGGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPNAHRCWYSTLPYIKMLGPLHL*ASDGTD Trigger: ATCAGTGCCATCGCTAGCGCAGAGGTGAAGAGGACC...TAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCTATGTGCATTAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCGAGATAGTGCATGCCTaGCAGCTTCATCGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PPNKNEEKRVPECVVVSFEIVHA*QLHRLI Trigger: GATGAGACGATGAAGCTGGCAGGCATGCACTATCTC...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTACCAGAATGTGTGGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTGCCAAACTGGGGGTTGTTaGTTTTCTTCTTCACCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGTRMCGCVLQQHLPIECQTGGC*FSSSPS Trigger: CGAAGGTGAAGAAGAAAACCAACAACCCCCAGTTTG...GCACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TGCGAGGGAACAGGTTTAGACAAAGTCCATACTTCCCTAATATTTAACAGATCCCAGCTGGAAAAGGTTTaGGGACAGGATGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEGTGLDKVHTSLIFNRSQLEKV*GQDGRG Trigger: GCCCCTGCCATCCTGTCCCCAAACCTTTTCCAGCTG...GGATCTGTTAAATATTAGGGAAGTATGGACTTTGTCTAAACCTGTTCCCTCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCACAGCCTTTAAAAATCTTTCCCAGACTTTCATCGAGGCAGCAAGCCTGGCAGACTTGGACTTaGACAAGCTGCCGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNAQPLKIFPRLSSRQQAWQTWT*TSCRGS Trigger: AGACCCTCGGCAGCTTGTCCAAGTCCAAGTCTGCCA...GGCTTGCTGCCTCGATGAAAGTCTGGGAAAGATTTTTAAAGGCTGTGCATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR TCA 90 bp | CCCCCTAATGCACATAGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTAACTGGCTCACTTTGGTaGGGATGTCGATCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPNAHRCWYSTLPYIKMLTGSLW*GCRSSP Trigger: AGGACTGGATCGACATCCTCACCAAAGTGAGCCAGT...TAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCTATGTGCATTAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TGCGAGGGAACAGGTTTAGACAAAGTCCATACTTCCCTAATATTTAACAGATCCTCCACGTGCTGCAGCTaGAACCATGTGTCCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CEGTGLDKVHTSLIFNRSSTCCS*NHVSLL Trigger: CAACAGGGACACATGGTTCCAGCTGCAGCACGTGGA...GGATCTGTTAAATATTAGGGAAGTATGGACTTTGTCTAAACCTGTTCCCTCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | CCCATGTCCTCTAAGATAAAGGAGTTTCTGTACCATCCTGTCCATCCCAGCCACTGTAGCTGCAGGGTCTaGTCACCTCAAAATAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PMSSKIKEFLYHPVHPSHCSCRV*SPQNKT Trigger: TGTTTTATTTTGAGGTGACCAGACCCTGCAGCTACA...GTGGCTGGGATGGACAGGATGGTACAGAAACTCCTTTATCTTAGAGGACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TGCGAGGGAACAGGTTTAGACAAAGTCCATACTTCCCTAATATTTAACAGATCCCCTCCACACAGTTGTTaGCCTGGATGTACAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CEGTGLDKVHTSLIFNRSPPHSC*PGCTGH Trigger: GTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGG...GGATCTGTTAAATATTAGGGAAGTATGGACTTTGTCTAAACCTGTTCCCTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TGCGAGGGAACAGGTTTAGACAAAGTCCATACTTCCCTAATATTTAACAGATCCCATGTGTCCCTGTTGTaGTACCTCTGCAAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CEGTGLDKVHTSLIFNRSHVSLL*YLCKSS Trigger: GGAAGACTTGCAGAGGTACCACAACAGGGACACATG...GGATCTGTTAAATATTAGGGAAGTATGGACTTTGTCTAAACCTGTTCCCTCGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | TGCGAGGGAACAGGTTTAGACAAAGTCCATACTTCCCTAATATTTAACAGATCCCCAAGATGTTCTCGATaGGGATGTTGCAGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CEGTGLDKVHTSLIFNRSPRCSR*GCCRVA Trigger: AGCCACTCTGCAACATCCCCATCGAGAACATCTTGG...GGATCTGTTAAATATTAGGGAAGTATGGACTTTGTCTAAACCTGTTCCCTCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | AGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTATTTAAAAACAGTCCTACCCCAGCGATGACCTaGTTCAGCGTCTTGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCWYSTLPYIKMLFKNSPTPAMT*FSVLYV Trigger: GACGTACAAGACGCTGAAGCAGGTCATCGCTGGGGT...AGGACTGTTTTTAAATAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCACAGCCTTTAAAAATCTTTCCCAGACTTTCATCGAGGCAGCAAGCCACTTCTCGACAATTTTaGTCCGGAAAACCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNAQPLKIFPRLSSRQQATSRQF*SGKPPP Trigger: AGGAGGAGGTTTTCCGGACCAAAATTGTCGAGAAGT...GGCTTGCTGCCTCGATGAAAGTCTGGGAAAGATTTTTAAAGGCTGTGCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCACAGCCTTTAAAAATCTTTCCCAGACTTTCATCGAGGCAGCAAGCCTCTGGCTGGATGACCTaGAACATGTTTTTCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAQPLKIFPRLSSRQQASGWMT*NMFFIR Trigger: CCGAATGAAAAACATGTTCCAGGTCATCCAGCCAGA...GGCTTGCTGCCTCGATGAAAGTCTGGGAAAGATTTTTAAAGGCTGTGCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR GCA 90 bp | AGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTATTTAAAAACAGTCCTCTGTTGTGGTACCTCTaGAAGTCTTCCTTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RCWYSTLPYIKMLFKNSPLLWYL*KSSFWM Trigger: CATCCAGAAGGAAGACTTGCAGAGGTACCACAACAG...AGGACTGTTTTTAAATAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 90 bp | GGCCGGGAGCCCACCAGTGCAGGGAGTGCAGCCAGCAGCCGTGTCTaGGGAGGCCCTGCAGCAGAGCCAGTGGCCGTTCAGGTAGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GREPTSAGSAASSRV*GGPAAEPVAVQVGR Trigger: TCGGCCTACCTGAACGGCCACTGGCTCTGCTGCAGGGCCTCCTCAGACACGGCTGCTGGCTGCACTCCCTGCACTGGTGGGCTCCCGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | GCAGCAGGAGCCGTACCAGCGGGATGGCTGCCTCTTGCTTGTCTCTaGACACCTCACCCAGGATGTGAGCTGCTGAGGCTGAGACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGAVPAGWLPLACL*TPHPGCELLRLRQA Trigger: AGCCTGTCTCAGCCTCAGCAGCTCACATCCTGGGTGAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCCGCTGGTACGGCTCCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 90 bp | AGATGCGCTCTGTTTCACGGTCCCCATCAATGTCCAGCTGGATGTTaGCCGGGAGCCCACCAGTGCAGGGAGTGCAGCCAGCAGCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCALFHGPHQCPAGC*PGAHQCRECSQQPC Trigger: ACACGGCTGCTGGCTGCACTCCCTGCACTGGTGGGCTCCCGGCCAACATCCAGCTGGACATTGATGGGGACCGTGAAACAGAGCGCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CACTACCCTGCCATAGTGCAGCAGGAGCCGTACCAGCGGGATGGCTaGCTCTTGCTTGTCTCTGCACACCTCACCCAGGATGTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HYPAIVQQEPYQRDG*LLLVSAHLTQDVSC Trigger: GCAGCTCACATCCTGGGTGAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCCGCTGGTACGGCTCCTGCTGCACTATGGCAGGGTAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | TACGTCTCCTGGGGGTCGTCGATGACGAACGTTGAGTACTCCTCCTaGTCAGGGCCGTCATACACAGACTTGCTGCCGCAGGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YVSWGSSMTNVEYSS*SGPSYTDLLPQASC Trigger: GCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGTTCGTCATCGACGACCCCCAGGAGACGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGACCACCTGTGCTGGCAGCTAAGGGGAGTGCACAGCCCAGGCAACAGTGTGAGCCGCTTCTGGTaGCACTGGCTCACTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSDHLCWQLRGVHSPGNSVSRFW*HWLTLV Trigger: CACCAAAGTGAGCCAGTGCAACCAGAAGCGGCTCAC...ACTGTTGCCTGGGCTGTGCACTCCCCTTAGCTGCCAGCACAGGTGGTCTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 90 bp | GGGATGGCTGCCTCTTGCTTGTCTCTGCACACCTCACCCAGGATGTaGGCTGCTGAGGCTGAGACAGGCTCCACATCTGCAGACTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GMAASCLSLHTSPRM*AAEAETGSTSADFS Trigger: ACTGAAGTCTGCAGATGTGGAGCCTGTCTCAGCCTCAGCAGCTCACATCCTGGGTGAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 90 bp | CTTCAGCGTCTTGTACGTCTCCTGGGGGTCGTCGATGACGAACGTTaGGTACTCCTCCTGCTCAGGGCCGTCATACACAGACTTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQRLVRLLGVVDDER*VLLLLRAVIHRLAA Trigger: GGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGTTCGTCATCGACGACCCCCAGGAGACGTACAAGACGCTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CTCCCGTATCTCGTCTTCTTGAACTTGTCTCTCCTGTACTGTGCGTaGTCCTGCTCAAGGGTCCCCACCCCAGCGATGACCTGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPYLVFLNLSLLYCA*SCSRVPTPAMTCFS Trigger: GCTGAAGCAGGTCATCGCTGGGGTGGGGACCCTTGAGCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATACGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CTGGCTCCCGTATCTCGTCTTCTTGAACTTGTCTCTCCTGTACTGTaGGTGCTCCTGCTCAAGGGTCCCCACCCCAGCGATGACCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAPVSRLLELVSPVL*VLLLKGPHPSDDLL Trigger: AAGCAGGTCATCGCTGGGGTGGGGACCCTTGAGCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATACGGGAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGTCATCTTGGAAGCGCTaGGCAGCCGCCTCCCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLSSWKR*AAASRK Trigger: CTTGCGGGAGGCGGCTGCCAAGCGCTTCCAAGATGA...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTGGCTGCTCTATGCTCTaGGGGTCCCTTCTCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: WPVGLTETQACGIPRLAFGCSML*GSLLPE Trigger: CTCGGGGAGAAGGGACCCCAAGAGCATAGAGCAGCC...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | ACGTTGAGTACTCCTCCTGCTCAGGGCCGTCATACACAGACTTGCTaGCGCAGGCCTCCTGCATCTTTTCCAGCTTGCCCATGTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLSTPPAQGRHTQTC*RRPPASFPACPCTG Trigger: ACCTGTACATGGGCAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CGAACGTTGAGTACTCCTCCTGCTCAGGGCCGTCATACACAGACTTaGTGCCGCAGGCCTCCTGCATCTTTTCCAGCTTGCCCATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: RTLSTPPAQGRHTQT*CRRPPASFPACPCT Trigger: TGTACATGGGCAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCACTGGCAGACTTGGACTaGGACAAGCTGCCGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPVGNLLYIAPLWESKPLADLD*DKLPRV Trigger: GACCCTCGGCAGCTTGTCCAAGTCCAAGTCTGCCAG...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | ATGTGTACGGAGCCACAGAGACCAGCAGGCAAGGGACAAGAGTGCACACTGAAGGCCTCCACACAGTTGTaGGCCTGGATGTACAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MCTEPQRPAGKGQECTLKASTQL*AWMYRA Trigger: TGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGC...CTTCAGTGTGCACTCTTGTCCCTTGCCTGCTGGTCTCTGTGGCTCCGTACACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CCCTGGGCCCGCTTGATCATGAACCCTTCTTTAAGCAGGATGGGCTaGTCTATGCTCTTGGGGTCCCTTCTCCCCGAGGATGAGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PWARLIMNPSLSRMG*SMLLGSLLPEDEIK Trigger: TTTGATCTCATCCTCGGGGAGAAGGGACCCCAAGAGCATAGAGCAGCCCATCCTGCTTAAAGAAGGGTTCATGATCAAGCGGGCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | TATCTCGTCTTCTTGAACTTGTCTCTCCTGTACTGTGCGTGCTCCTaGTCAAGGGTCCCCACCCCAGCGATGACCTGCTTCAGCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YLVFLNLSLLYCACS*SRVPTPAMTCFSVL Trigger: CAAGACGCTGAAGCAGGTCATCGCTGGGGTGGGGACCCTTGAGCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 90 bp | GTGAGGATGTCGATCCAGTCCTTGGCCTCCACACAGTTGTTGGCCTaGATGTACAGGGCACGCTCTGGCTGGATGACCTGGAACATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRMSIQSLASTQLLA*MYRARSGWMTWNMF Trigger: AAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAGGACTGGATCGACATCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTGGCATCCGTCATACACAGACTaGCTGCCGCAGGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLFQDPPTPIKSGSRHWHPSYTD*LPQASC Trigger: GCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGG...ATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCAACCTGCTTCAGCGTCTaGTACGTCTCCTGGGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSTCFSV*YVSWGS Trigger: CGACCCCCAGGAGACGTACAAGACGCTGAAGCAGGT...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 90 bp | GCCTCCACACAGTTGTTGGCCTGGATGTACAGGGCACGCTCTGGCTaGATGACCTGGAACATGTTTTTCATTCGGAAGGACTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASTQLLAWMYRARSG*MTWNMFFIRKDSSS Trigger: AGAGGAGGAGTCCTTCCGAATGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 90 bp | CTTGGCCTCCACACAGTTGTTGGCCTGGATGTACAGGGCACGCTCTaGCTGGATGACCTGGAACATGTTTTTCATTCGGAAGGACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGLHTVVGLDVQGTL*LDDLEHVFHSEGLL Trigger: GAGGAGTCCTTCCGAATGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCATCTCAGAGCTATGTCCCCGAGGACCCTTTGGCTTTGTGAGAAATCAATGCGTGCAGCGAGTTaGTGGCAGACGACACCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLHLRAMSPRTLWLCEKSMRAAS*WQTTPV Trigger: CACTGGTGTCGTCTGCCACAAACTCGCTGCACGCAT...TGATTTCTCACAAAGCCAAAGGGTCCTCGGGGACATAGCTCTGAGATGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTTCGATCTCACAGGACTaGTGGCTCTGGCAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPVGLTETQACGIPRLAFSISQD*WLWQIS Trigger: GGAGATCTGCCAGAGCCACAAGTCCTGTGAGATCGA...AAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 90 bp | GGCAGACTTGGACTTGGACAAGCTGCCGAGGGTCTGGATCGTCTTTaGGATAAGTGTCAGGGTTCTAGAAGTCTGTGGATCCGTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRLGLGQAAEGLDRL*DKCQGSRSLWIRVV Trigger: CACCACACGGATCCACAGACTTCTAGAACCCTGACACTTATCTCAAAGACGATCCAGACCCTCGGCAGCTTGTCCAAGTCCAAGTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CTCACCCCGGACTTGGTGATGACAGTGAAGATGCGATCCACATACTaGCTCAGGCTCTCCATGTTGTTCTCGAGGTTTTCGCCGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTPDLVMTVKMRSTY*LRLSMLFSRFSPSF Trigger: GAAAGACGGCGAAAACCTCGAGAACAACATGGAGAGCCTGAGGCAGTATGTGGATCGCATCTTCACTGTCATCACCAAGTCCGGGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CAACCACCTTTATCTGCCACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCGAGTGTCGCAGAATCTaGAGAGGAAGCCTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPPLSATLPVGNLLYIAPECRRI*RGSLSS Trigger: GGAACTGAGGCTTCCTCTCAAGATTCTGCGACACTC...GGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTGGCATAGGCTCTTATTGCCGTaGTCTCGGGGCTGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLFQDPPTPIKSGSRHWHRLLLP*SRGWRK Trigger: CTTCCTCCAGCCCCGAGACAACGGCAATAAGAGCCT...ATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCCAGACATTGGCATCACATCCAAGTCATCTaGGAAGCGCTTGGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLFQDPPTPIKSGSRHWHHIQVI*EALGSR Trigger: GCGGCTGCCAAGCGCTTCCAAGATGACTTGGATGTG...ATGCCAATGTCTGGAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CATAAGGCTCCAGCAGTACTGTGGGGGCTAAGCTGGTACAGTCTGTCTTGTCTGTTGCACTGGCTCACTTaGGTGAGGATGTCGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HKAPAVLWGLSWYSLSCLLHWLT*VRMSIQ Trigger: CTGGATCGACATCCTCACCAAAGTGAGCCAGTGCAA...CAGACAAGACAGACTGTACCAGCTTAGCCCCCACAGTACTGCTGGAGCCTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 90 bp | CATGCCTGCCAGCTTCATCGTCTCATCTATGCACTTGGATGTCAGTaGGTTTCCTCGGAAGATGGTATTGGGGTCCTGGGTCCTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HACQLHRLIYALGCQ*VSSEDGIGVLGPLH Trigger: GTGAAGAGGACCCAGGACCCCAATACCATCTTCCGAGGAAACTCACTGACATCCAAGTGCATAGATGAGACGATGAAGCTGGCAGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | GAGGAAGCCTCAGTTCCCCGAGAAACTCATCCCCAAACTTCAGGTTaGTGGCGTTCCAGAGGTCAACTCGGATTTCAAGTTTGTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: EEASVPRETHPQTSG*WRSRGQLGFQVCPR Trigger: ACGTGGACAAACTTGAAATCCGAGTTGACCTCTGGAACGCCAGCAACCTGAAGTTTGGGGATGAGTTTCTCGGGGAACTGAGGCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | CATTTAACCTCAGAGACCCCAAGTCATCTGGCTTCAGGCTCTTATTaGCGTTGTCTCGGGGCTGGAGGAAGTACCAGGCTTCATAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLTSETPSHLASGSY*RCLGAGGSTRLHKS Trigger: GCTCTTATGAAGCCTGGTACTTCCTCCAGCCCCGAGACAACGGCAATAAGAGCCTGAAGCCAGATGACTTGGGGTCTCTGAGGTTAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 90 bp | CTCCTGGTCCAGGTTCACAGTGCAGTAGCAGTCCCTCATCTTGTTTaGCCCCGGGTAGGAAGGAAGATTCTTGGCTTCACCAATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLVQVHSAVAVPHLV*PRVGRKILGFTNLD Trigger: ATCAAGATTGGTGAAGCCAAGAATCTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGACTGCTACTGCACTGTGAACCTGGACCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGAGTCCCTCATCTTGTTaGGCCCCGGGTAGGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLSPSSC*APGRKE Trigger: TTCCTTCCTACCCGGGGCCAAACAAGATGAGGGACT...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCTGTAGGGAACCTCCTCTACATTGCTCCCCTCTGGGAATCCAAACCAGACTTCTCGACAATTTaGGTCCGGAAAACCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPVGNLLYIAPLWESKPDFSTI*VRKTSS Trigger: GGAGGAGGTTTTCCGGACCAAAATTGTCGAGAAGTC...TGGTTTGGATTCCCAGAGGGGAGCAATGTAGAGGAGGTTCCCTACAGGTAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGTCCCTCATCTTGTTTGGCCCCGGGTAGGAAGGAAGATTCTTGGCTTCAGGGTAGAACCAATCTaGATCCTCACGCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAVPHLVWPRVGRKILGFRVEPI*ILTLWK Trigger: CTTCCAGAGCGTGAGGATCAAGATTGGTTCTACCCT...GAAGCCAAGAATCTTCCTTCCTACCCGGGGCCAAACAAGATGAGGGACTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| CDS TCA 90 bp | GGAGGAAGTACCAGGCTTCATAAGAGCTCGAGTGTCGCAGAATCTTaGGAGGAAGCCTCAGTTCCCCGAGAAACTCATCCCCAAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGSTRLHKSSSVAES*EEASVPRETHPQTS Trigger: TGAAGTTTGGGGATGAGTTTCTCGGGGAACTGAGGCTTCCTCTCAAGATTCTGCGACACTCGAGCTCTTATGAAGCCTGGTACTTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 90 bp | AGATCTCCTCAATGGTGGGCTTCAGGGTCACATGGAGATAGTGCATaGCTGCCAGCTTCATCGTCTCATCTATGCACTTGGATGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPQWWASGSHGDSA*LPASSSHLCTWMSV Trigger: CACTGACATCCAAGTGCATAGATGAGACGATGAAGCTGGCAGGCATGCACTATCTCCATGTGACCCTGAAGCCCACCATTGAGGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | AAGGGTACCAGAATGTGTGGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTGCATGTCGATCCAGTCCTaGGCCTCCACACAGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGTRMCGCVLQQHLPIECMSIQS*ASTQLL Trigger: CAACAACTGTGTGGAGGCCAAGGACTGGATCGACAT...GCACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | AAGGGTACCAGAATGTGTGGTTGTGTCCTTCAGCAACATCTGCCCATAGAGTGCTTGGCTTCACCAATCTaGATCCTCACGCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGTRMCGCVLQQHLPIECLASPI*ILTLWK Trigger: CTTCCAGAGCGTGAGGATCAAGATTGGTGAAGCCAA...GCACTCTATGGGCAGATGTTGCTGAAGGACACAACCACACATTCTGGTACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CTGTTGGGCTCACAGAGACACAGGCATGTGGAATACCACGTTTGGCCTTTATTGAACCATGTGTCCCTGTaGTGGTACCTCTGCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGSQRHRHVEYHVWPLLNHVSL*WYLCKS Trigger: AGACTTGCAGAGGTACCACAACAGGGACACATGGTT...CAATAAAGGCCAAACGTGGTATTCCACATGCCTGTGTCTCTGTGAGCCCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | AAAAATGCACAGCCTTTAAAAATCTTTCCCAGACTTTCATCGAGGCAGCAAGCCCGGGATGGCTGCCTCTaGCTTGTCTCTGCACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KNAQPLKIFPRLSSRQQARDGCL*LVSAHL Trigger: GAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCCG...GGCTTGCTGCCTCGATGAAAGTCTGGGAAAGATTTTTAAAGGCTGTGCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCCAGCTCACCCCGGACTaGGTGATGACAGTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PPNKNEEKRVPECVVVSFQLTPD*VMTVKM Trigger: CATCTTCACTGTCATCACCAAGTCCGGGGTGAGCTG...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | GTACAGTCTGTCTTGTCTGTTTCAGGACCCTCCCACCCCAATCAAAAGTGGTTCTTAAAACTGGCAGACTaGGACTTGGACAAGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VQSVLSVSGPSHPNQKWFLKLAD*DLDKLP Trigger: CGGCAGCTTGTCCAAGTCCAAGTCTGCCAGTTTTAA...GAACCACTTTTGATTGGGGTGGGAGGGTCCTGAAACAGACAAGACAGACTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 90 bp | TCCTTAAAACTGGCAGACTTGGACTTGGACAAGCTGCCGAGGGTCTaGATCGTCTTTGAGATAAGTGTCAGGGTTCTAGAAGTCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLKLADLDLDKLPRV*IVFEISVRVLEVCG Trigger: TCCACAGACTTCTAGAACCCTGACACTTATCTCAAAGACGATCCAGACCCTCGGCAGCTTGTCCAAGTCCAAGTCTGCCAGTTTTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAACAAGAATGAAGAGAAAAGGGTACCAGAATGTGTGGTTGTGTCCTTCGTCTCATCTATGCACTaGGATGTCAGTGAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPNKNEEKRVPECVVVSFVSSMH*DVSEFP Trigger: AGGAAACTCACTGACATCCAAGTGCATAGATGAGAC...GAAGGACACAACCACACATTCTGGTACCCTTTTCTCTTCATTCTTGTTGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | AGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTATTTAAAAACAGTCCTATGGCTGCCTCTTGCTaGTCTCTGCACACCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RCWYSTLPYIKMLFKNSPMAASC*SLHTSP Trigger: GGGTGAGGTGTGCAGAGACAAGCAAGAGGCAGCCAT...AGGACTGTTTTTAAATAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS-3UTR CAA 90 bp | CCCCCTAATGCACATAGATGCTGGTATTCCACACTGCCTTATATCAAAATGCTACGAAACCACCTCTTCTaGAAATTCTTCATTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPNAHRCWYSTLPYIKMLRNHLF*KFFIPN Trigger: GTTTGGAATGAAGAATTTCAAGAAGAGGTGGTTTCG...TAGCATTTTGATATAAGGCAGTGTGGAATACCAGCATCTATGTGCATTAGGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | GCTGGATGTTGGCCGGGAGCCCACCAGTGCAGGGAGTaGAGCCAGCAGCCGTGTCTGAGGAGGCCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGCWPGAHQCRE*SQQPCLRRPCS Trigger: GCTGCAGGGCCTCCTCAGACACGGCTGCTGGCTGCACTCCCTGCACTGGTGGGCTCCCGGCCAACATCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CTGTTTCACGGTCCCCATCAATGTCCAGCTGGATGTTaGCCGGGAGCCCACCAGTGCAGGGAGTGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LFHGPHQCPAGC*PGAHQCRECSQ Trigger: CTGGCTGCACTCCCTGCACTGGTGGGCTCCCGGCCAACATCCAGCTGGACATTGATGGGGACCGTGAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GTGCAGCAGGAGCCGTACCAGCGGGATGGCTGCCTCTaGCTTGTCTCTGCACACCTCACCCAGGATGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQQEPYQRDGCL*LVSAHLTQDVS Trigger: GCTCACATCCTGGGTGAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCCGCTGGTACGGCTCCTGCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | GCCATAGTGCAGCAGGAGCCGTACCAGCGGGATGGCTaGCTCTTGCTTGTCTCTGCACACCTCACCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AIVQQEPYQRDG*LLLVSAHLTQD Trigger: ATCCTGGGTGAGGTGTGCAGAGACAAGCAAGAGGCAGCCATCCCGCTGGTACGGCTCCTGCTGCACTATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | ATGCGCTCTGTTTCACGGTCCCCATCAATGTCCAGCTaGATGTTGGCCGGGAGCCCACCAGTGCAGGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: MRSVSRSPSMSS*MLAGSPPVQGV Trigger: CACTCCCTGCACTGGTGGGCTCCCGGCCAACATCCAGCTGGACATTGATGGGGACCGTGAAACAGAGCGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GCTGCTCACGGCCGTGTACCTCACATCCAAGTCATCTaGGAAGCGCTTGGCAGCCGCCTCCCGCAAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AAHGRVPHIQVI*EALGSRLPQGE Trigger: TTCTCCTTGCGGGAGGCGGCTGCCAAGCGCTTCCAAGATGACTTGGATGTGAGGTACACGGCCGTGAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 72 bp | GCTTCAGCGTCTTGTACGTCTCCTGGGGGTCGTCGATaGCGAACGTTGAGTACTCCTCCTGCTCAGGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASASCTSPGGRR*RTLSTPPAQGR Trigger: ACGGCCCTGAGCAGGAGGAGTACTCAACGTTCGTCATCGACGACCCCCAGGAGACGTACAAGACGCTGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | ACTCCTCCTGCTCAGGGCCGTCATACACAGACTTGCTaGCGCAGGCCTCCTGCATCTTTTCCAGCTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPPAQGRHTQTC*RRPPASFPACP Trigger: TGGGCAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | TGGGGGTCGTCGATGACGAACGTTGAGTACTCCTCCTaGTCAGGGCCGTCATACACAGACTTGCTGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WGSSMTNVEYSS*SGPSYTDLLPQ Trigger: CTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGTTCGTCATCGACGACCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | TCGATCCAGTCCTTGGCCTCCACACAGTTGTTGGCCTaGATGTACAGGGCACGCTCTGGCTGGATGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SIQSLASTQLLA*MYRARSGWMTW Trigger: CCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAGGACTGGATCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | GACGGGTGGAAGACGGTGAGCCGCTTCTGGTTGCACTGGCTCACTTaGGTGAGGATGTCGATCCAGTCCTTGGCCTCCACACAGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DGWKTVSRFWLHWLT*VRMSIQSLASTQLL Trigger: CAACAACTGTGTGGAGGCCAAGGACTGGATCGACATCCTCACCAAAGTGAGCCAGTGCAACCAGAAGCGGCTCACCGTCTTCCACCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | AGTACTCCTCCTGCTCAGGGCCGTCATACACAGACTTaGTGCCGCAGGCCTCCTGCATCTTTTCCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: STPPAQGRHTQT*CRRPPASFPAC Trigger: GCAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | GACGGGTGGAAGACGGTGAGCCGCTTCTGGTTGCACTaGCTCACTTTGGTGAGGATGTCGATCCAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DGWKTVSRFWLH*LTLVRMSIQSL Trigger: CAAGGACTGGATCGACATCCTCACCAAAGTGAGCCAGTGCAACCAGAAGCGGCTCACCGTCTTCCACCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CCAGCGATGACCTGCTTCAGCGTCTTGTACGTCTCCTaGGGGTCGTCGATGACGAACGTTGAGTACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAMTCFSVLYVS*GSSMTNVEYSS Trigger: GGAGGAGTACTCAACGTTCGTCATCGACGACCCCCAGGAGACGTACAAGACGCTGAAGCAGGTCATCGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | AGGATGTCGATCCAGTCCTTGGCCTCCACACAGTTGTaGGCCTGGATGTACAGGGCACGCTCTGGCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RMSIQSLASTQL*AWMYRARSGWM Trigger: CATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAGGACTGGATCGACATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GAGTACTCCTCCTGCTCAGGGCCGTCATACACAGACTaGCTGCCGCAGGCCTCCTGCATCTTTTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EYSSCSGPSYTD*LPQASCIFSSL Trigger: CAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | CTGCTCACGGCCGTGTACCTCACATCCAAGTCATCTTGGAAGCGCTaGGCAGCCGCCTCCCGCAAGGAGAAAAAGATGTCACACATGACG | + |
|
Preference number: 6 (lower is better) Translates to: LLTAVYLTSKSSWKR*AAASRKEKKMSHMT Trigger: CGTCATGTGTGACATCTTTTTCTCCTTGCGGGAGGCGGCTGCCAAGCGCTTCCAAGATGACTTGGATGTGAGGTACACGGCCGTGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | ACTTTGGTGAGGATGTCGATCCAGTCCTTGGCCTCCACACAGTTGTaGGCCTGGATGTACAGGGCACGCTCTGGCTGGATGACCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TLVRMSIQSLASTQL*AWMYRARSGWMTWN Trigger: GTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAGGACTGGATCGACATCCTCACCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | ACGAACGTTGAGTACTCCTCCTGCTCAGGGCCGTCATACACAGACTaGCTGCCGCAGGCCTCCTGCATCTTTTCCAGCTTGCCCATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TNVEYSSCSGPSYTD*LPQASCIFSSLPMY Trigger: GTACATGGGCAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGTTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | TCTCCAATAGGGTGCTCCTGGCTCCCGTATCTCGTCTTCTTGAACTaGTCTCTCCTGTACTGTGCGTGCTCCTGCTCAAGGGTCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SPIGCSWLPYLVFLN*SLLYCACSCSRVPT Trigger: GGTGGGGACCCTTGAGCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATACGGGAGCCAGGAGCACCCTATTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 72 bp | CTTGTACGTCTCCTGGGGGTCGTCGATGACGAACGTTaGGTACTCCTCCTGCTCAGGGCCGTCATACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LVRLLGVVDDER*VLLLLRAVIHR Trigger: TCTGTGTATGACGGCCCTGAGCAGGAGGAGTACTCAACGTTCGTCATCGACGACCCCCAGGAGACGTACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | GAAGATGGTATTGGGGTCCTGGGTCCTCTTCACCTCTaGGCTAGCGATGGCACTGATGAAGGGCACTACCCT | + |
|
Preference number: 6 (lower is better) Translates to: EDGIGVLGPLHL*ASDGTDEGHYP Trigger: AGGGTAGTGCCCTTCATCAGTGCCATCGCTAGCGCAGAGGTGAAGAGGACCCAGGACCCCAATACCATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | CTCAGAGACCCCAAGTCATCTGGCTTCAGGCTCTTATaGCCGTTGTCTCGGGGCTGGAGGAAGTACCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRDPKSSGFRLL*PLSRGWRKYQA Trigger: AGCCTGGTACTTCCTCCAGCCCCGAGACAACGGCAATAAGAGCCTGAAGCCAGATGACTTGGGGTCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | AAGACGGTGAGCCGCTTCTGGTTGCACTGGCTCACTTaGGTGAGGATGTCGATCCAGTCCTTGGCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KTVSRFWLHWLT*VRMSIQSLAST Trigger: TGTGGAGGCCAAGGACTGGATCGACATCCTCACCAAAGTGAGCCAGTGCAACCAGAAGCGGCTCACCGTCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GGGTGCTCCTGGCTCCCGTATCTCGTCTTCTTGAACTaGTCTCTCCTGTACTGTGCGTGCTCCTGCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GCSWLPYLVFLN*SLLYCACSCSR Trigger: CCTTGAGCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATACGGGAGCCAGGAGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GGTAGGACTGAGGGAGGACTCAGGGTAGAACCAATCTaGATCCTCACGCTCTGGAAGACCCGCAGTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRTEGGLRVEPI*ILTLWKTRSPS Trigger: AGAGGGACTGCGGGTCTTCCAGAGCGTGAGGATCAAGATTGGTTCTACCCTGAGTCCTCCCTCAGTCCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| CDS CAA 90 bp | TTCTGGTTGCACTGGCTCACTTTGGTGAGGATGTCGATCCAGTCCTaGGCCTCCACACAGTTGTTGGCCTGGATGTACAGGGCACGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FWLHWLTLVRMSIQS*ASTQLLAWMYRARS Trigger: AGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAGGACTGGATCGACATCCTCACCAAAGTGAGCCAGTGCAACCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | TATAAGCAGGGTAGGACTGAGGGAGGACTCAGGGTAGAACCAATCTaGATCCTCACGCTCTGGAAGACCCGCAGTCCCTCTTCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: YKQGRTEGGLRVEPI*ILTLWKTRSPSSST Trigger: GGTGGAGGAAGAGGGACTGCGGGTCTTCCAGAGCGTGAGGATCAAGATTGGTTCTACCCTGAGTCCTCCCTCAGTCCTACCCTGCTTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154454.8 |
||
| CDS GCA 72 bp | TCAGAGACCCCAAGTCATCTGGCTTCAGGCTCTTATTaGCGTTGTCTCGGGGCTGGAGGAAGTACCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SETPSHLASGSY*RCLGAGGSTRL Trigger: AAGCCTGGTACTTCCTCCAGCCCCGAGACAACGGCAATAAGAGCCTGAAGCCAGATGACTTGGGGTCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | GGGCCGTCATACACAGACTTGCTGCCGCAGGCCTCCTaGATCTTTTCCAGCTTGCCCATGTACAGGTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPSYTDLLPQAS*IFSSLPMYRLK Trigger: CTTTAACCTGTACATGGGCAAGCTGGAAAAGATGCAGGAGGCCTGCGGCAGCAAGTCTGTGTATGACGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CACAGGACTTGTGGCTCTGGCAGATCTCCTCAATGGTaGGCTTCAGGGTCACATGGAGATAGTGCATGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HRTCGSGRSPQW*ASGSHGDSACL Trigger: CAGGCATGCACTATCTCCATGTGACCCTGAAGCCCACCATTGAGGAGATCTGCCAGAGCCACAAGTCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CCGTGTACCTCACATCCAAGTCATCTTGGAAGCGCTTaGCAGCCGCCTCCCGCAAGGAGAAAAAGATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCTSHPSHLGSA*QPPPARRKRCH Trigger: GTGACATCTTTTTCTCCTTGCGGGAGGCGGCTGCCAAGCGCTTCCAAGATGACTTGGATGTGAGGTACACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GCCGTGTACCTCACATCCAAGTCATCTTGGAAGCGCTaGGCAGCCGCCTCCCGCAAGGAGAAAAAGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AVYLTSKSSWKR*AAASRKEKKMS Trigger: TGACATCTTTTTCTCCTTGCGGGAGGCGGCTGCCAAGCGCTTCCAAGATGACTTGGATGTGAGGTACACGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | CACTGGCTCACTTTGGTGAGGATGTCGATCCAGTCCTaGGCCTCCACACAGTTGTTGGCCTGGATGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: HWLTLVRMSIQS*ASTQLLAWMYR Trigger: CCTGTACATCCAGGCCAACAACTGTGTGGAGGCCAAGGACTGGATCGACATCCTCACCAAAGTGAGCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | CCAATAGGGTGCTCCTGGCTCCCGTATCTCGTCTTCTaGAACTTGTCTCTCCTGTACTGTGCGTGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PIGCSWLPYLVF*NLSLLYCACSC Trigger: GCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATACGGGAGCCAGGAGCACCCTATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | CTCTTGTCTCCAATAGGGTGCTCCTGGCTCCCGTATCTCGTCTTCTaGAACTTGTCTCTCCTGTACTGTGCGTGCTCCTGCTCAAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSPIGCSWLPYLVF*NLSLLYCACSCSRV Trigger: GACCCTTGAGCAGGAGCACGCACAGTACAGGAGAGACAAGTTCAAGAAGACGAGATACGGGAGCCAGGAGCACCCTATTGGAGACAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | AGTGTCAGGGTTCTAGAAGTCTGTGGATCCGTGTGGTaGGGTGTCAGCTGGAAAAGGTTTGGGGACAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SVRVLEVCGSVW*GVSWKRFGDRM Trigger: CATCCTGTCCCCAAACCTTTTCCAGCTGACACCCCACCACACGGATCCACAGACTTCTAGAACCCTGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | CCGTCTTTCAGTTTCACAGGGTCGATCTCACAGGACTaGTGGCTCTGGCAGATCTCCTCAATGGTGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSFSFTGSISQD*WLWQISSMVGF Trigger: GAAGCCCACCATTGAGGAGATCTGCCAGAGCCACAAGTCCTGTGAGATCGACCCTGTGAAACTGAAAGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | AGGTTTTCGCCGTCTTTCAGTTTCACAGGGTCGATCTCACAGGACTaGTGGCTCTGGCAGATCTCCTCAATGGTGGGCTTCAGGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RFSPSFSFTGSISQD*WLWQISSMVGFRVT Trigger: TGTGACCCTGAAGCCCACCATTGAGGAGATCTGCCAGAGCCACAAGTCCTGTGAGATCGACCCTGTGAAACTGAAAGACGGCGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 72 bp | ACCAGGCTTCATAAGAGCTCGAGTGTCGCAGAATCTTaGGAGGAAGCCTCAGTTCCCCGAGAAACTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: TRLHKSSSVAES*EEASVPRETHP Trigger: GGGATGAGTTTCTCGGGGAACTGAGGCTTCCTCTCAAGATTCTGCGACACTCGAGCTCTTATGAAGCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 72 bp | TGTTGGCCTGGATGTACAGGGCACGCTCTGGCTGGATaGCCTGGAACATGTTTTTCATTCGGAAGGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CWPGCTGHALAG*PGTCFSFGRTP Trigger: AGGAGTCCTTCCGAATGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | GGTGGGCTTCAGGGTCACATGGAGATAGTGCATGCCTaGCAGCTTCATCGTCTCATCTATGCACTTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GGLQGHMEIVHA*QLHRLIYALGC Trigger: ACATCCAAGTGCATAGATGAGACGATGAAGCTGGCAGGCATGCACTATCTCCATGTGACCCTGAAGCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | CAATGGTGGGCTTCAGGGTCACATGGAGATAGTGCATaGCTGCCAGCTTCATCGTCTCATCTATGCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QWWASGSHGDSA*LPASSSHLCTW Trigger: CCAAGTGCATAGATGAGACGATGAAGCTGGCAGGCATGCACTATCTCCATGTGACCCTGAAGCCCACCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CAGTTGTTGGCCTGGATGTACAGGGCACGCTCTGGCTaGATGACCTGGAACATGTTTTTCATTCGGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QLLAWMYRARSG*MTWNMFFIRKD Trigger: GTCCTTCCGAATGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GCCATGTACGACTCCTTAAAACTGGCAGACTTGGACTaGGACAAGCTGCCGAGGGTCTGGATCGTCTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMYDSLKLADLD*DKLPRVWIVFE Trigger: CTCAAAGACGATCCAGACCCTCGGCAGCTTGTCCAAGTCCAAGTCTGCCAGTTTTAAGGAGTCGTACATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 90 bp | AGAGGAAGCCTCAGTTCCCCGAGAAACTCATCCCCAAACTTCAGGTaGCTGGCGTTCCAGAGGTCAACTCGGATTTCAAGTTTGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RGSLSSPRNSSPNFR*LAFQRSTRISSLST Trigger: CGTGGACAAACTTGAAATCCGAGTTGACCTCTGGAACGCCAGCAACCTGAAGTTTGGGGATGAGTTTCTCGGGGAACTGAGGCTTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 72 bp | TGCAGAGTGGCTGATCACCTTTGCTTTTCTGGTAGGTaGACTCGTGGTTCGTCAGGCGAAACCACCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRVADHLCFSGR*TRGSSGETTSS Trigger: AGAAGAGGTGGTTTCGCCTGACGAACCACGAGTTCACCTACCAGAAAAGCAAAGGTGATCAGCCACTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CTGGCAGACTTGGACTTGGACAAGCTGCCGAGGGTCTaGATCGTCTTTGAGATAAGTGTCAGGGTTCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LADLDLDKLPRV*IVFEISVRVLE Trigger: TTCTAGAACCCTGACACTTATCTCAAAGACGATCCAGACCCTCGGCAGCTTGTCCAAGTCCAAGTCTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CACACAGTTGTTGGCCTGGATGTACAGGGCACGCTCTaGCTGGATGACCTGGAACATGTTTTTCATTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HTVVGLDVQGTL*LDDLEHVFHSE Trigger: TTCCGAATGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCCCTGTACATCCAGGCCAACAACTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | CTCAGTTCCCCGAGAAACTCATCCCCAAACTTCAGGTaGCTGGCGTTCCAGAGGTCAACTCGGATTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSPRNSSPNFR*LAFQRSTRISS Trigger: ACTTGAAATCCGAGTTGACCTCTGGAACGCCAGCAACCTGAAGTTTGGGGATGAGTTTCTCGGGGAACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS TCA 72 bp | CAGCTTCATCGTCTCATCTATGCACTTGGATGTCAGTaGGTTTCCTCGGAAGATGGTATTGGGGTCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QLHRLIYALGCQ*VSSEDGIGVLG Trigger: ACCCAGGACCCCAATACCATCTTCCGAGGAAACTCACTGACATCCAAGTGCATAGATGAGACGATGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | TCAGTTCCCCGAGAAACTCATCCCCAAACTTCAGGTTaGTGGCGTTCCAGAGGTCAACTCGGATTTCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVPRETHPQTSG*WRSRGQLGFQV Trigger: AACTTGAAATCCGAGTTGACCTCTGGAACGCCAGCAACCTGAAGTTTGGGGATGAGTTTCTCGGGGAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | GACTTGGTGATGACAGTGAAGATGCGATCCACATACTaGCTCAGGCTCTCCATGTTGTTCTCGAGGTTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: DLVMTVKMRSTY*LRLSMLFSRFS Trigger: CGAAAACCTCGAGAACAACATGGAGAGCCTGAGGCAGTATGTGGATCGCATCTTCACTGTCATCACCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CCA 72 bp | CACAGCCAAGATGTTCTCGATGGGGATGTTGCAGAGTaGCTGATCACCTTTGCTTTTCTGGTAGGTGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: HSQDVLDGDVAE*LITFAFLVGEL Trigger: GAGTTCACCTACCAGAAAAGCAAAGGTGATCAGCCACTCTGCAACATCCCCATCGAGAACATCTTGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | AAGATGCGATCCACATACTGCCTCAGGCTCTCCATGTaGTTCTCGAGGTTTTCGCCGTCTTTCAGTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: KMRSTYCLRLSM*FSRFSPSFSFT Trigger: TGTGAAACTGAAAGACGGCGAAAACCTCGAGAACAACATGGAGAGCCTGAGGCAGTATGTGGATCGCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS CAA 72 bp | GTGAACTCGTGGTTCGTCAGGCGAAACCACCTCTTCTaGAAATTCTTCATTCCAAACCGTTTCCTTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VNSWFVRRNHLF*KFFIPNRFLPW Trigger: CCAGGGAAGGAAACGGTTTGGAATGAAGAATTTCAAGAAGAGGTGGTTTCGCCTGACGAACCACGAGTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||
| CDS GCA 72 bp | CCACGTCCTCTTCCTCAAAGTCAAAGTGGGACTTTTTaGTGTAGCTGCAGGGTCTGGTCACCTCAAAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRPLPQSQSGTF*CSCRVWSPQNK Trigger: TTTATTTTGAGGTGACCAGACCCTGCAGCTACAGCAAAAAGTCCCACTTTGACTTTGAGGAAGAGGACGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117551.4 |
||