Pregenerated sensors for RASA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021549Ensembl transcript IDs: ENSMUST00000109552.3, ENSMUST00000223598.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTaGTCTTCAGCAGAATCTTGGGTTTTTGCTTGCATAGCTCACACA | + |
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Preference number: 1 (lower is better) Translates to: SAQYSAQIAYKGAGS*SSAESWVFACIAHT Trigger: TGTGTGAGCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 90 bp | GTACACCAAGGCTCAGAGTTTGGTAGAGATTCCATGTGGAAAAAGTaGGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: VHQGSEFGRDSMWKK*AIFCTDSLQRCWQL Trigger: CAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAAACTCTGAGCCTTGGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 90 bp | TCAGAGTTTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTaGACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SEFGRDSMWKKCAIF*TDSLQRCWQLLFSR Trigger: TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAAACTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CCA 90 bp | TGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTaGCAGTTGCTCTTCAGCAGAATCTTGGGTTTTTGCTTGCATAGC | + |
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Preference number: 1 (lower is better) Translates to: WKKCAIFCTDSLQRC*QLLFSRILGFCLHS Trigger: GCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 90 bp | ATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTaGTGGCAGTTGCTCTTCAGCAGAATCTTGGGTTTTTGCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: MWKKCAIFCTDSLQR*WQLLFSRILGFCLH Trigger: ATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CCA 90 bp | TTGTTAAGGGTACACCAAGGCTCAGAGTTTGGTAGAGATTCCATGTaGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LLRVHQGSEFGRDSM*KKCAIFCTDSLQRC Trigger: GCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAAACTCTGAGCCTTGGTGTACCCTTAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR TCA 90 bp | ATCCAGTTAAATTCTGTTGTCTATAGAATGCGTTTCCTTGTCAGTTaGTTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: IQLNSVVYRMRFLVS*FHSSFSKRQQNFGN Trigger: ATTGCCAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTCTATAGACAACAGAATTTAACTGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGAGCAAAGGAGACATaGTGGTGTGAATTACCACGG | + |
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Preference number: 2 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFRAKET*WCELPR Trigger: CCGTGGTAATTCACACCATCATGTCTCCTTTGCTCT...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CAA 90 bp | ACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGAATCTaGGGTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TDSLQRCWQLLFSRI*GFCLHSSHITGMWE Trigger: TTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CAA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTaGCTCTTCAGCAGAATCTTGGGTTTTTGCTTGCATAGCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: KCAIFCTDSLQRCWQ*LFSRILGFCLHSSH Trigger: GTGTGAGCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAAGCTTACAAAGGTGCTaGCAGTTGCTCTTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKSLQRC*QLLFSR Trigger: TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCT...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACTCTTGGGTTTTTGCTTaGATAGCTCACACATCACTG | + |
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Preference number: 2 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYSWVFA*IAHTSL Trigger: CAGTGATGTGTGAGCTATGCAAGCAAAAACCCAAGA...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGTCTTGGGTTTTTGCTTaGATAGCTCACACATCACTG | + |
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Preference number: 2 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRSWVFA*IAHTSL Trigger: CAGTGATGTGTGAGCTATGCAAGCAAAAACCCAAGA...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGAGAATCTTGGGTTTTTaGTTGCATAGCTCACACATC | + |
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Preference number: 2 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRRILGF*LHSSHI Trigger: GATGTGTGAGCTATGCAAGCAAAAACCCAAGATTCT...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAATCTTCAGCAGAATCTTaGGTTTTTGCTTGCATAGCT | + |
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Preference number: 2 (lower is better) Translates to: GRDSMWKKCAIFCTDSLQSSAES*VFACIA Trigger: AGCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGA...TTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACTCTTCAGCAGAATCTTaGGTTTTTGCTTGCATAGCT | + |
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Preference number: 2 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYSSAES*VFACIA Trigger: AGCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGA...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGAGAATCTTGGGTTTTTaGTTGCATAGCTCACACATC | + |
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Preference number: 2 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLRILGF*LHSSHI Trigger: GATGTGTGAGCTATGCAAGCAAAAACCCAAGATTCT...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CAA 90 bp | AATATATTTTCAAAGTTCAAGACACAGTCAGTCATAGCATTTTTGTaGTTGTTAAGGGTACACCAAGGCTCAGAGTTTGGTAGAGATTCC | + |
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Preference number: 2 (lower is better) Translates to: NIFSKFKTQSVIAFL*LLRVHQGSEFGRDS Trigger: GGAATCTCTACCAAACTCTGAGCCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAACTTTGAAAATATATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR TCA 72 bp | TTTCTTTTTGGCAAGAGCAAAGGAGACATGATGGTGTaGATTACCACGGTGGGCATACTGAATCCACGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FLFGKSKGDMMV*ITTVGILNPRR Trigger: TCTGCGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCAAAAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 72 bp | GGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTaGACAGATAGCTTACAAAGGTGCTGGCAGTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GRDSMWKKCAIF*TDSLQRCWQLL Trigger: GAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CCA 72 bp | TGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTaGCAGTTGCTCTTCAGCAGAATCTTGGGTTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: CAIFCTDSLQRC*QLLFSRILGFC Trigger: GCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 72 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTaGTGGCAGTTGCTCTTCAGCAGAATCTTGGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KCAIFCTDSLQR*WQLLFSRILGF Trigger: AAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 72 bp | GGCTCAGAGTTTGGTAGAGATTCCATGTGGAAAAAGTaGGCAATATTCTGCACAGATAGCTTACAAAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: GSEFGRDSMWKK*AIFCTDSLQRC Trigger: GCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAAACTCTGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR GCA 72 bp | TATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTaGTCTTCAGCAGAATCTTGGGTTTTTGCTTGCATA | + |
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Preference number: 3 (lower is better) Translates to: YSAQIAYKGAGS*SSAESWVFACI Trigger: TATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR CCA 72 bp | GTACACCAAGGCTCAGAGTTTGGTAGAGATTCCATGTaGAAAAAGTGCGCAATATTCTGCACAGATAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: VHQGSEFGRDSM*KKCAIFCTDSL Trigger: TAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAAACTCTGAGCCTTGGTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR CAA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAATAGCATTTTTGTTGTaGTTAAGGGTACACCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKIAFLL*LRVHQG Trigger: GCCTTGGTGTACCCTTAACAACAACAAAAATGCTAT...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGATAGCATTTTTGTTGTaGTTAAGGGTACACCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLIAFLL*LRVHQG Trigger: GCCTTGGTGTACCCTTAACAACAACAAAAATGCTAT...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGGTCATAGCATTTTTGTaGTTGTTAAGGGTACACCAA | + |
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Preference number: 3 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLVIAFL*LLRVHQ Trigger: TTGGTGTACCCTTAACAACAACAAAAATGCTATGAC...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| 3UTR TCA 72 bp | AATTCTGTTGTCTATAGAATGCGTTTCCTTGTCAGTTaGTTTCATAGTTCCTTTTCCAAGAGACAGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: NSVVYRMRFLVS*FHSSFSKRQQN Trigger: GTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTCTATAGACAACAGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACGGCCGCCTTCCTCACTaGCCGCCTCGGCCGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYGRLPH*PPRPPS Trigger: TGATGGCGGCCGAGGCGGGCAGTGAGGAAGGCGGCC...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR TCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGTGCCCCTCCCTTGCATaGGTTTTTGCTACTTGGACG | + |
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Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTCPSLA*VFATWT Trigger: CGTCCAAGTAGCAAAAACTCATGCAAGGGAGGGGCA...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | GCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGACCAGATTTCCCTGCCTaGCTGAGGCGTTCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AIFCTDSLQRCWQLLFSRPDFPA*LRRSSA Trigger: AGCAGAAGAACGCCTCAGGCAGGCAGGGAAATCTGG...TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR TCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTVKQGC*PDEGVY Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR TCA 90 bp | GCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGATGCCCCTCCCTTGCATaGGTTTTTGCTACTTGGACG | + |
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Preference number: 4 (lower is better) Translates to: AIFCTDSLQRCWQLLFSRCPSLA*VFATWT Trigger: CGTCCAAGTAGCAAAAACTCATGCAAGGGAGGGGCA...TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR TCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGAAAGACAAACTCCTCTaGCCATACTGGGTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTKDKLL*PYWVLP Trigger: GGGCAAAACCCAGTATGGTCAGAGGAGTTTGTCTTT...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTGGTTAGTGGGAGGTaGGGTCAGCGGTATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRLVSGR*GQRYGH Trigger: GTGGCCATACCGCTGACCGCACCTCCCACTAACCAG...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR GCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGTTCCATGGAGTATCGTaGTCGAACACGCAAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTFHGVS*SNTQRS Trigger: GGATCTTTGCGTGTTCGAGCACGATACTCCATGGAA...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR CCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGGTGCGGTCAGCGGTATaGCCACCTCTTCCTCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRVRSAV*PPLPLR Trigger: ACGAAGAGGAAGAGGTGGCCATACCGCTGACCGCAC...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR TCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFVKQGC*PDEGVY Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGCTCCATCAAGGTACTTaGAAGTGTTGTAGCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTLHQGT*KCCSSK Trigger: TTTCGAGCTACAACACTTGCAAGTACCTTGATGGAG...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR CCA 90 bp | TGGCAAGAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCTTTAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: WQEQRRHDGVNYHGGHTESLVGC*PVVFGL Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTAAAGA...TTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAGCTTCCAGATTTCCCTaGCTGCCTGAGGCGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKASRFP*LPEAFF Trigger: GAAGAACGCCTCAGGCAGGCAGGGAAATCTGGAAGC...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR GCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGAAACTGCAAAATGCTTaGAGACCTTTCATCCAATCC | + |
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Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTKLQNA*RPFIQS Trigger: GGATTGGATGAAAGGTCTGCAAGCATTTTGCAGTTT...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | TGGCAAGAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAACTCCATCAAGGTACTTaGAAGTGTTGTAGCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: WQEQRRHDGVNYHGGHTELHQGT*KCCSSK Trigger: TTTCGAGCTACAACACTTGCAAGTACCTTGATGGAG...TTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGGTCAGTTCTAGAATaGTCTGTAGTGTCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFRSVLE*SVVSGS Trigger: ACTTCCGGACACTACAGAGCATTCTAGAACTGACCT...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| 3UTR CAA 72 bp | TGGCAGTTGCTCTTCAGCAGAATCTTGGGTTTTTGCTaGCATAGCTCACACATCACTGGAATGTGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQLLFSRILGFC*HSSHITGMWES Trigger: ACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | GCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGAAGGAGATGGGGAATCTaGGATGATATTAAACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: AIFCTDSLQRCWQLLFSRRRWGI*DDIKHP Trigger: CGGATGTTTAATATCATCTCAGATTCCCCATCTCCT...TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTCACCACGCTCATTGCTaGGTGTTCTCAGTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFHHAHC*VFSVHL Trigger: CAGATGAACTGAGAACACTCAGCAATGAGCGTGGTG...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACCACCACGCTCATTGCTaGGTGTTCTCAGTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYHHAHC*VFSVHL Trigger: CAGATGAACTGAGAACACTCAGCAATGAGCGTGGTG...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAACCTTGCATGAGTTTTTaGTACTTGGACGCTATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WQEQRRHDGVNYHGGHTEPCMSF*YLDAIQ Trigger: TTGAATAGCGTCCAAGTAGCAAAAACTCATGCAAGG...TTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCATATCTTTAGTAGGATaGTGGCCAGTAGTGTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFISLVG*WPVVFG Trigger: ACCGAACACTACTGGCCAGCATCCTACTAAAGATAT...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAAGTAGCTTTCATATACTaGTCCATCAAGGTACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQEQRRHDGVNYHGGHTEVAFIY*SIKVLA Trigger: TGCAAGTACCTTGATGGAGCAGTATATGAAAGCTAC...TTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGCAAGCTCTGAAAGTATaGTCAATAGGTGTGCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQRRHDGVNYHGGHTESTQALKV*SIGVLN Trigger: ATTTAGCACACCTATTGAGCATACTTTCAGAGCTTG...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGAGCTACACAAATCTCATaGAATGCTGCTAAGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: AIFCTDSLQRCWQLLFSRATQIS*NAAKSR Trigger: TCGTGACTTAGCAGCATTGCATGAGATTTGTGTAGC...TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTCAGAGTTTATCCTCTGCTTGTTCTaGAGTTTCTCGGGAAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSVIAFLLLLRVHQGSEFILCLF*SFSGSD Trigger: GTCGCTTCCCGAGAAACTCCAGAACAAGCAGAGGAT...AAACTCTGAGCCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTTGTCTGACTAAGGAATaGAAGTACAAAGGACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFCLTKE*KYKGPR Trigger: CCGGGGTCCTTTGTACTTTCATTCCTTAGTCAGACA...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGTCCAGGAGTATTATCTaGGGGCCTCACAAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRSRSII*GPHKKA Trigger: AGCTTTCTTGTGAGGCCCTCAGATAATACTCCTGGA...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAAAGACAAACTCCTCTaGCCATACTGGGTTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYKDKLL*PYWVLP Trigger: GGGCAAAACCCAGTATGGTCAGAGGAGTTTGTCTTT...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGACCTGAGGCGTTCTTCTaGTATAGTTCTATCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIFCTDSLQRCWQLLFSRPEAFF*YSSIKF Trigger: AAACTTGATAGAACTATAGCAGAAGAACGCCTCAGG...TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACGCCTCACAAGAAAGCTaGAGACTTGTCCAACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYASQES*RLVQLS Trigger: TGACAGTTGGACAAGTCTGCAGCTTTCTTGTGAGGC...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAAACTGCAAAATGCTTaGAGACCTTTCATCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFKLQNA*RPFIQS Trigger: GGATTGGATGAAAGGTCTGCAAGCATTTTGCAGTTT...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGTTCCATGGAGTATCGTaGTCGAACACGCAAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRFHGVS*SNTQRS Trigger: GGATCTTTGCGTGTTCGAGCACGATACTCCATGGAA...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACATCTTCTACTGGCTCTaGTGGTGCAACTGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYIFYWL*WCNWIE Trigger: CTCTATCCAGTTGCACCACCAGAGCCAGTAGAAGAT...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| 3UTR CAA 72 bp | ATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTaGCTCTTCAGCAGAATCTTGGGTTTTTGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFCTDSLQRCWQ*LFSRILGFCLH Trigger: ATGCAAGCAAAAACCCAAGATTCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCTACTTTTCCGTAAACTaGAAAATGCTTGCAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFYFSVN*KMLADL Trigger: AAGGTCTGCAAGCATTTTGCAGTTTACGGAAAAGTA...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCCAAGCTCTGAAAGTATaGTCAATAGGTGTGCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFQALKV*SIGVLN Trigger: ATTTAGCACACCTATTGAGCATACTTTCAGAGCTTG...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTCAGTTCTAGAATaGTCTGTAGTGTCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRDSMWKKCAIFCTDSLQRSVLE*SVVSGS Trigger: ACTTCCGGACACTACAGAGCATTCTAGAACTGACCT...TTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAATTGTGTAGGGCAGAATaGCTCGTACACGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKLCRAE*LVHAFY Trigger: ATAGAAGGCGTGTACGAGCCATTCTGCCCTACACAA...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGTCTTTAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRSLVGC*PVVFGL Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTAAAGA...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTATCAAGTTTTCCATaGTACCACTGGTTAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRLSSFP*YHWLVG Trigger: TCCCACTAACCAGTGGTATCATGGAAAACTTGATAG...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACGTAGGCCACTTATGCTaGACTGATTTCTGTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYVGHLC*TDFCKH Trigger: GTGTTTACAGAAATCAGTTCAGCATAAGTGGCCTAC...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTCAGAGTTTGTAGGCCACTTATGCTaGACTGATTTCTGTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QSVIAFLLLLRVHQGSEFVGHLC*TDFCKH Trigger: GTGTTTACAGAAATCAGTTCAGCATAAGTGGCCTAC...AAACTCTGAGCCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGAGGAGATGGGGAATCTaGGATGATATTAAACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRRRWGI*DDIKHP Trigger: CGGATGTTTAATATCATCTCAGATTCCCCATCTCCT...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTTTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFFHPIL*LFWSFS Trigger: GGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAAATATCTTTAGTAGGATaGTGGCCAGTAGTGTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRDSMWKKCAIFCTDSLQISLVG*WPVVFG Trigger: ACCGAACACTACTGGCCAGCATCCTACTAAAGATAT...TTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTCCTCCCATCATAAACTaGTTGTTAGGTGTTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFPPIIN*LLGVGQ Trigger: TTGTCCAACACCTAACAACCAGTTTATGATGGGAGG...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTCCCTTGATCCTGCATTaGTACAGGTTCCTTAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFPLILH*YRFLKI Trigger: TATCTTAAGGAACCTGTACCAATGCAGGATCAAGGG...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTCAGAGTTTATCCTCTGCTTGTTCTaGAGTTTCTCCTGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSVIAFLLLLRVHQGSEFILCLF*SFSCKV Trigger: TACTTTGCAGGAGAAACTCCAGAACAAGCAGAGGAT...AAACTCTGAGCCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTCGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFRWKYF*SHEYFL Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACCGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYRWKYF*SHEYFL Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACAATGTTCTCAGTTCATCTaGATGAGCTACACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRDSMWKKCAIFCTDSLQCSQFI*MSYTNL Trigger: GAGATTTGTGTAGCTCATTCAGATGAACTGAGAACA...TTGTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGAGATTCCATGTGGAAAAAGTGCGCAATATTCTGCACAGATAGCTTACTGTTCTCAGTTCATCTaGATGAGCTACACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVEIPCGKSAQYSAQIAYCSQFI*MSYTNL Trigger: GAGATTTGTGTAGCTCATTCAGATGAACTGAGAACA...GTAAGCTATCTGTGCAGAATATTGCGCACTTTTTCCACATGGAATCTCTACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAATTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKFHPIL*LFWSFS Trigger: CGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223598.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTCAGAGTTTTTGGAAATTTTCCCGTaGAACCATATTTTGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QSVIAFLLLLRVHQGSEFLEIFP*NHILPS Trigger: CGAAGGCAAAATATGGTTCCACGGGAAAATTTCCAA...AAACTCTGAGCCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGTATCTGAAAACAGTTTaGCCTGCCGAAGAGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLYLKTV*PAEETV Trigger: GACAGTCTCTTCGGCAGGCCAAACTGTTTTCAGATA...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| 3UTR CAA 72 bp | TCAAAGTTCAAGACACAGTCAGTCATAGCATTTTTGTaGTTGTTAAGGGTACACCAAGGCTCAGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKFKTQSVIAFL*LLRVHQGSEFG Trigger: ACCAAACTCTGAGCCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAACTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTTCAACAATAAGGCCTTaGTCATCTGTTCTTAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFACIAHTSLECGKVCYFSTIRP*SSVLRL Trigger: CAATCTAAGAACAGATGAGCAAGGCCTTATTGTTGA...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS-3UTR GCA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAACCTTGCATGAGTTTTTaGTACTTGGACGCTATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKPCMSF*YLDAIQ Trigger: TTGAATAGCGTCCAAGTAGCAAAAACTCATGCAAGG...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGGCTACACAAATCTCATaGAATGCTGCTAAGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLATQIS*NAAKSR Trigger: TCGTGACTTAGCAGCATTGCATGAGATTTGTGTAGC...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR GCA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAATACTTTTCCGTAAACTaGAAAATGCTTGCAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKYFSVN*KMLADL Trigger: AAGGTCTGCAAGCATTTTGCAGTTTACGGAAAAGTA...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR CCA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGTATTTCATCAGTGTCTaGTACTTTTGTGTAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLYFISV*YFCVGQ Trigger: CTGCCCTACACAAAAGTACCAGACACTGATGAAATA...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS TCA 90 bp | GCCCGGGACACGGGGCGGCTGCCACCGGCAGGGCCGCGGGTAACTTaGCCCGGCACGCTGCCGAGTAGGCGCTGGAGCCCGTGGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ARDTGRLPPAGPRVT*PGTLPSRRWSPWPR Trigger: GCGCGGCCACGGGCTCCAGCGCCTACTCGGCAGCGTGCCGGGTCAAGTTACCCGCGGCCCTGCCGGTGGCAGCCGCCCCGTGTCCCGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS CCA 90 bp | GGGAGGTGCGGTCAGCGGTATGGCCACCTCTTCCTCTTCGTATTCTaGTCCATCCAGGGAGTCACCTTCATCCACGGTCCCCAAACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRCGQRYGHLFLFVF*SIQGVTFIHGPQTG Trigger: TCCGGTTTGGGGACCGTGGATGAAGGTGACTCCCTGGATGGACCAGAATACGAAGAGGAAGAGGTGGCCATACCGCTGACCGCACCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | TGGCAAGAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAAAGGGCCGCGGGTAACTaGACCCGGCACGCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: WQEQRRHDGVNYHGGHTERAAGN*TRHAAE Trigger: CTCGGCAGCGTGCCGGGTCAAGTTACCCGCGGCCCT...TTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EQRRHDGVNYHGGHTESTHPILC*FWSFSG Trigger: TCCCGAGAAACTCCAGAACAAGCAGAGGATTGGATG...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223598.2 |
||
| CDS GCA 90 bp | CGGCCTCCGATCACTCTCTCTTATAAGATAGCTTCCAGATTTCCCTaGCTGCCTGAGGCGTTCTTCTGCTATAGTTCTATCAAGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPITLSYKIASRFP*LPEAFFCYSSIKFS Trigger: GGAAAACTTGATAGAACTATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAATCTGGAAGCTATCTTATAAGAGAGAGTGATCGGAGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | AAGTGCGCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCCAGTGTCTGGTACTTTaGTGTAGGGCAGAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KCAIFCTDSLQRCWQLLFQCLVL*CRAEWL Trigger: GAGCCATTCTGCCCTACACAAAAGTACCAGACACTG...GAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGCGCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGCCCTTGCATGAGTTTTaGCTACTTGGACGCTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQRRHDGVNYHGGHTESTPLHEF*LLGRYS Trigger: TGAATAGCGTCCAAGTAGCAAAAACTCATGCAAGGG...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS TCA 90 bp | TGCTGTACACCACGCTCATTGCTGAGTGTTCTCAGTTCATCTGAATaGGCTACACAAATCTCATGCAATGCTGCTAAGTCACGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCTPRSLLSVLSSSE*ATQISCNAAKSRDR Trigger: CCTGTCTCGTGACTTAGCAGCATTGCATGAGATTTGTGTAGCTCATTCAGATGAACTGAGAACACTCAGCAATGAGCGTGGTGTACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS GCA 90 bp | ATCTCATGCAATGCTGCTAAGTCACGAGACAGGTCAGTTCTAGAATaGTCTGTAGTGTCCGGAAGTTCAGGTACATTCCCAAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ISCNAAKSRDRSVLE*SVVSGSSGTFPSSS Trigger: AGATGAACTTGGGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACTGACCTGTCTCGTGACTTAGCAGCATTGCATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS GCA 90 bp | TATAAGATAGCTTCCAGATTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATAGTTCTATCAAGTTTTCCATGATACCACTGGTTAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKIASRFPCLPEAFF*YSSIKFSMIPLVSG Trigger: CCCACTAACCAGTGGTATCATGGAAAACTTGATAGAACTATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAATCTGGAAGCTATCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS GCA 90 bp | TTATTAGATGTCCCTGGGCTACTTTTCCGTAAACTGCAAAATGCTTaGAGACCTTTCATCCAATCCTCTGCTTGTTCTGGAGTTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLDVPGLLFRKLQNA*RPFIQSSACSGVSR Trigger: CCGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAAGGTCTGCAAGCATTTTGCAGTTTACGGAAAAGTAGCCCAGGGACATCTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223598.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGTATAAAAAGCATCCTTaGTCTTCCGACGAATTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EQRRHDGVNYHGGHTESTYKKHP*SSDELC Trigger: ACACAATTCGTCGGAAGACAAAGGATGCTTTTTATA...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAATCCACGATGAGTTTTTGCTACTaGGACGCTATTCAAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EQRRHDGVNYHGGHTESTMSFCY*DAIQVD Trigger: ATCTACTTGAATAGCGTCCAAGTAGCAAAAACTCAT...CGTGGATTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS CCA 90 bp | CTTCCCATCCACAGTGTCGTTCAGTACTTGCCCTTGATCCTGCATTaGTACAGGTTCCTTAAGATAATAGCCTTCAACAATCTGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPIHSVVQYLPLILH*YRFLKIIAFNNLFF Trigger: AAAGAACAGATTGTTGAAGGCTATTATCTTAAGGAACCTGTACCAATGCAGGATCAAGGGCAAGTACTGAACGACACTGTGGATGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GCAATATTCTGCACAGATAGCTTACAAAGGTGCTGGCAGTTGCTCTTCAGCAGACCCATCATAAACTGGTaGTTAGGTGTTGGACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: AIFCTDSLQRCWQLLFSRPIINW*LGVGQI Trigger: AATTTGTCCAACACCTAACAACCAGTTTATGATGGG...TCTGCTGAAGAGCAACTGCCAGCACCTTTGTAAGCTATCTGTGCAGAATATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGCTATCTGAAAACAGTTaGGCCTGCCGAAGAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRLSENS*ACRRDC Trigger: ACAGTCTCTTCGGCAGGCCAAACTGTTTTCAGATAG...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | TGGCAAGAGCAAAGGAGACATGATGGTGTGAATTACCACGGTGGGCATACTGAAATGAGTTTTTGCTACTaGGACGCTATTCAAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WQEQRRHDGVNYHGGHTEMSFCY*DAIQVD Trigger: ATCTACTTGAATAGCGTCCAAGTAGCAAAAACTCAT...TTCAGTATGCCCACCGTGGTAATTCACACCATCATGTCTCCTTTGCTCTTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLHPILC*FWSFSC Trigger: GCAGGAGAAACTCCAGAACAAGCAGAGGATTGGATG...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GTTTTTGCTTGCATAGCTCACACATCACTGGAATGTGGGAAAGTGTGCTATTTTCCCTTGCATGAGTTTTaGCTACTTGGACGCTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFACIAHTSLECGKVCYFPLHEF*LLGRYS Trigger: TGAATAGCGTCCAAGTAGCAAAAACTCATGCAAGGG...AAAATAGCACACTTTCCCACATTCCAGTGATGTGTGAGCTATGCAAGCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR CAA 90 bp | GAATGCGTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAATGTACACCACGCTCATaGCTGAGTGTTCTCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ECVSLSVDFIVPFPRDSKCTPRS*LSVLSS Trigger: TGAACTGAGAACACTCAGCAATGAGCGTGGTGTACA...TTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAACGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS-3UTR CAA 90 bp | GTTCAAGACACAGTCAGTCATAGCATTTTTGTTGTTGTTAAGGGTACACCAAGGTCATCTGTTCTTAGATaGGTAACCCACATCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VQDTVSHSIFVVVKGTPRSSVLR*VTHIHP Trigger: TGGATGGATGTGGGTTACCAATCTAAGAACAGATGA...CCTTGGTGTACCCTTAACAACAACAAAAATGCTATGACTGACTGTGTCTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS-3UTR CAA 90 bp | GTTTCCTTGTCAGTTGATTTCATAGTTCCTTTTCCAAGAGACAGCAAAACTTTGTGTACACCACGCTCATaGCTGAGTGTTCTCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLSVDFIVPFPRDSKTLCTPRS*LSVLSS Trigger: TGAACTGAGAACACTCAGCAATGAGCGTGGTGTACA...CAAAGTTTTGCTGTCTCTTGGAAAAGGAACTATGAAATCAACTGACAAGGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS TCA 90 bp | AGCAATAATCCTAAAATGATTGACAACATTTGTCTGACTAAGGAATaGAAGTACAAAGGACCCCGGCCTCCGATCACTCTCTCTTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNNPKMIDNICLTKE*KYKGPRPPITLSYK Trigger: CTTATAAGAGAGAGTGATCGGAGGCCGGGGTCCTTTGTACTTTCATTCCTTAGTCAGACAAATGTTGTCAATCATTTTAGGATTATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS TCA 90 bp | TCTCTGTCATTTAGTGTGCATAACAACAATGATTCAAGCTTTTCATaGAGAAATATCTTTAGTAGGATGCTGGCCAGTAGTGTTCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSFSVHNNNDSSFS*RNIFSRMLASSVRS Trigger: AGACCGAACACTACTGGCCAGCATCCTACTAAAGATATTTCTTCATGAAAAGCTTGAATCATTGTTGTTATGCACACTAAATGACAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS GCA 90 bp | ACAACAATGATTCAAGCTTTTCATGAAGAAATATCTTTAGTAGGATaGTGGCCAGTAGTGTTCGGTCTTGTCCACATACATGTGATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTMIQAFHEEISLVG*WPVVFGLVHIHVIK Trigger: CTTTATCACATGTATGTGGACAAGACCGAACACTACTGGCCAGCATCCTACTAAAGATATTTCTTCATGAAAAGCTTGAATCATTGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS CCA 90 bp | ACAATGATTCAAGCTTTTCATGAAGAAATATCTTTAGTAGGATGCTaGCCAGTAGTGTTCGGTCTTGTCCACATACATGTGATAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TMIQAFHEEISLVGC*PVVFGLVHIHVIKH Trigger: ATGCTTTATCACATGTATGTGGACAAGACCGAACACTACTGGCCAGCATCCTACTAAAGATATTTCTTCATGAAAAGCTTGAATCATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS TCA 72 bp | ACGGGGCGGCTGCCACCGGCAGGGCCGCGGGTAACTTaGCCCGGCACGCTGCCGAGTAGGCGCTGGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TGRLPPAGPRVT*PGTLPSRRWSP Trigger: CGGGCTCCAGCGCCTACTCGGCAGCGTGCCGGGTCAAGTTACCCGCGGCCCTGCCGGTGGCAGCCGCCCCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS CAA 72 bp | GGCCCGAGCGTCTCAGCAGGCAAAGACAGAGTCCCCTaGGTGAAAGCGACGTCTCCCGCAGGTCCGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSVSAGKDRVP*VKATSPAGPAA Trigger: GGCCGCCGGACCTGCGGGAGACGTCGCTTTCACCAAGGGGACTCTGTCTTTGCCTGCTGAGACGCTCGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS TCA 72 bp | CGAGCGTCTCAGCAGGCAAAGACAGAGTCCCCTTGGTaGAAGCGACGTCTCCCGCAGGTCCGGCGGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RASQQAKTESPW*KRRLPQVRRPQ Trigger: CTGCGGCCGCCGGACCTGCGGGAGACGTCGCTTTCACCAAGGGGACTCTGTCTTTGCCTGCTGAGACGCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS CCA 72 bp | GGTCAGCGGTATGGCCACCTCTTCCTCTTCGTATTCTaGTCCATCCAGGGAGTCACCTTCATCCACGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQRYGHLFLFVF*SIQGVTFIHGP Trigger: GGGACCGTGGATGAAGGTGACTCCCTGGATGGACCAGAATACGAAGAGGAAGAGGTGGCCATACCGCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS GCA 72 bp | ACTGCAAAATGCTTGCAGACCTTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCGGGAAGCGACGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TAKCLQTFHPIL*LFWSFSGSDAG Trigger: GCCCGCGTCGCTTCCCGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAAGGTCTGCAAGCATTTTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223598.2 |
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| CDS CAA 72 bp | GCAAAATGCTTGCAGACCTTTCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCGGGAAGCGACGCGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AKCLQTFHPILC*FWSFSGSDAGK Trigger: TTTGCCCGCGTCGCTTCCCGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAAGGTCTGCAAGCATTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223598.2 |
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| CDS TCA 72 bp | AGGCGTTCTTCTGCTATAGTTCTATCAAGTTTTCCATaGTACCACTGGTTAGTGGGAGGTGCGGTCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSSAIVLSSFP*YHWLVGGAVSG Trigger: ACCGCTGACCGCACCTCCCACTAACCAGTGGTATCATGGAAAACTTGATAGAACTATAGCAGAAGAACGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS TCA 72 bp | GATGTCAGGAGGAAGATCATCAAAGACAAACTCCTCTaGCCATACTGGGTTTTGCCCCTCCCTTGCATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DVRRKIIKDKLL*PYWVLPLPCMS Trigger: ACTCATGCAAGGGAGGGGCAAAACCCAGTATGGTCAGAGGAGTTTGTCTTTGATGATCTTCCTCCTGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS GCA 72 bp | GCTTCCAGATTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATAGTTCTATCAAGTTTTCCATGATACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ASRFPCLPEAFF*YSSIKFSMIPL Trigger: CAGTGGTATCATGGAAAACTTGATAGAACTATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAATCTGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS GCA 72 bp | GTCCCTGGGCTACTTTTCCGTAAACTGCAAAATGCTTaGAGACCTTTCATCCAATCCTCTGCTTGTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPGLLFRKLQNA*RPFIQSSACSG Trigger: TCCAGAACAAGCAGAGGATTGGATGAAAGGTCTGCAAGCATTTTGCAGTTTACGGAAAAGTAGCCCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS GCA 72 bp | AATGCTGCTAAGTCACGAGACAGGTCAGTTCTAGAATaGTCTGTAGTGTCCGGAAGTTCAGGTACATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: NAAKSRDRSVLE*SVVSGSSGTFP Trigger: TGGGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACTGACCTGTCTCGTGACTTAGCAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
||
| CDS CCA 72 bp | TTTCATCAGTGTCTGGTACTTTTGTGTAGGGCAGAATaGCTCGTACACGCCTTCTATCTTCTACTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FHQCLVLLCRAE*LVHAFYLLLAL Trigger: CAGAGCCAGTAGAAGATAGAAGGCGTGTACGAGCCATTCTGCCCTACACAAAAGTACCAGACACTGATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS CAA 72 bp | ATAGATCTCCTTCCCATCCACAGTGTCGTTCAGTACTaGCCCTTGATCCTGCATTGGTACAGGTTCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: IDLLPIHSVVQY*PLILHWYRFLK Trigger: CTTAAGGAACCTGTACCAATGCAGGATCAAGGGCAAGTACTGAACGACACTGTGGATGGGAAGGAGATCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS CAA 72 bp | CTCCTTCCCATCCACAGTGTCGTTCAGTACTTGCCCTaGATCCTGCATTGGTACAGGTTCCTTAAGATAATA | + |
|
Preference number: 6 (lower is better) Translates to: LLPIHSVVQYLP*ILHWYRFLKII Trigger: TATTATCTTAAGGAACCTGTACCAATGCAGGATCAAGGGCAAGTACTGAACGACACTGTGGATGGGAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS CAA 90 bp | GTTATAGATCTCCTTCCCATCCACAGTGTCGTTCAGTACTTGCCCTaGATCCTGCATTGGTACAGGTTCCTTAAGATAATAGCCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VIDLLPIHSVVQYLP*ILHWYRFLKIIAFN Trigger: GTTGAAGGCTATTATCTTAAGGAACCTGTACCAATGCAGGATCAAGGGCAAGTACTGAACGACACTGTGGATGGGAAGGAGATCTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS TCA 72 bp | CCGAAAATACAGAGAATAATCTCCAGGAGTATTATCTaGGGGCCTCACAAGAAAGCTGCAGACTTGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PKIQRIISRSII*GPHKKAADLSN Trigger: GTTGGACAAGTCTGCAGCTTTCTTGTGAGGCCCTCAGATAATACTCCTGGAGATTATTCTCTGTATTTTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
||
| CDS TCA 72 bp | AGCCTTCAACAATCTGTTCTTTCCGATAATGGTCTATaGTGTCCCCGATACTGTTATAATAGCGGCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLQQSVLSDNGL*CPRYCYNSGLP Trigger: TGGGAGGCCGCTATTATAACAGTATCGGGGACATCATAGACCATTATCGGAAAGAACAGATTGTTGAAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS CAA 90 bp | AATTGTGTTATAGATCTCCTTCCCATCCACAGTGTCGTTCAGTACTaGCCCTTGATCCTGCATTGGTACAGGTTCCTTAAGATAATAGCC | + |
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Preference number: 6 (lower is better) Translates to: NCVIDLLPIHSVVQY*PLILHWYRFLKIIA Trigger: GGCTATTATCTTAAGGAACCTGTACCAATGCAGGATCAAGGGCAAGTACTGAACGACACTGTGGATGGGAAGGAGATCTATAACACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS CCA 72 bp | CACAGTGTCGTTCAGTACTTGCCCTTGATCCTGCATTaGTACAGGTTCCTTAAGATAATAGCCTTCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: HSVVQYLPLILH*YRFLKIIAFNN Trigger: ATTGTTGAAGGCTATTATCTTAAGGAACCTGTACCAATGCAGGATCAAGGGCAAGTACTGAACGACACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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| CDS CCA 72 bp | TCATCTGTTGCATGTCCTTTCTGTAACCTGCTCAACTaGCAACGCATAAATAAGATATCTGGATCTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSVACPFCNLLN*QRINKISGSLL Trigger: AAGCAAAGATCCAGATATCTTATTTATGCGTTGCCAGTTGAGCAGGTTACAGAAAGGACATGCAACAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109552.3 ENSMUST00000223598.2 |
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| CDS CAA 72 bp | TCTTCAACAATAAGGCCTTGCTCATCTGTTCTTAGATaGGTAACCCACATCCATCCATCTTCTAACTCATTG | + |
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Preference number: 6 (lower is better) Translates to: SSTIRPCSSVLR*VTHIHPSSNSL Trigger: CAATGAGTTAGAAGATGGATGGATGTGGGTTACCAATCTAAGAACAGATGAGCAAGGCCTTATTGTTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109552.3 |
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