Pregenerated sensors for RARRES2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009281Ensembl transcript IDs: ENSMUST00000009425.7, ENSMUST00000204182.2, ENSMUST00000204267.3, ENSMUST00000204930.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCTGGAGTTGAAAGTCTCTGGGAGACGATATGCTCCTGCTGGGTaGTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SLELKVSGRRYAPAG*CHSCTGSKVKSCLG Trigger: CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACTTTCAACTCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| 3UTR GCA 72 bp | TTGAAAGTCTCTGGGAGACGATATGCTCCTGCTGGGTaGTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LKVSGRRYAPAG*CHSCTGSKVKS Trigger: GGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| 3UTR TCA 72 bp | AAAGGAACAGACTCAGCAATTTTATTAGCCTGGAGTTaGAAGTCTCTGGGAGACGATATGCTCCTGCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: KGTDSAILLAWS*KSLGDDMLLLG Trigger: ACCCAGCAGGAGCATATCGTCTCCCAGAGACTTTCAACTCCAGGCTAATAAAATTGCTGAGTCTGTTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009425.7 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGCACGTGTGCCCACTGTaGCCAGCCATAGGGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGHVCPL*PAIGLG Trigger: CCCTAGCCCTATGGCTGGGCACAGTGGGCACACGTG...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTACACGTGTGCCCACTGTaGCCAGCCATAGGGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLGDDMLLLGAATAVQGVHVCPL*PAIGLG Trigger: CCCTAGCCCTATGGCTGGGCACAGTGGGCACACGTG...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGGCTCTGTCCCACGTGTaGCCACTGTGCCCAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: SLWETICSCWVLPQLYREALSHV*PLCPAI Trigger: TATGGCTGGGCACAGTGGGCACACGTGGGACAGAGC...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAGCTCTGTCCCACGTGTaGCCACTGTGCCCAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: SLGDDMLLLGAATAVQGVALSHV*PLCPAI Trigger: TATGGCTGGGCACAGTGGGCACACGTGGGACAGAGC...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGGCTCTGTCCCACGTGTaGCCACTGTGCCCAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKALSHV*PLCPAI Trigger: TATGGCTGGGCACAGTGGGCACACGTGGGACAGAGC...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGGGCCAACTGCACAGGTaGGTGTTTGTGGAACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLWETICSCWVLPQLYREGQLHR*VFVELL Trigger: GAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCC...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGCCCTTGCTTCAGAATTaGGCAGTGGACTATCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGPLLQN*AVDYPA Trigger: GGCCGGATAGTCCACTGCCCAATTCTGAAGCAAGGG...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGCCCTTGCTTCAGAATTaGGCAGTGGACTATCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLWETICSCWVLPQLYREPLLQN*AVDYPA Trigger: GGCCGGATAGTCCACTGCCCAATTCTGAAGCAAGGG...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR TCA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGCACAAAGGTGCCAGCTaGGAAGAGCACTTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLWETICSCWVLPQLYREHKGAS*EEHFFS Trigger: GCTGAAGAAGTGCTCTTCTCAGCTGGCACCTTTGTG...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAGGCCAACTGCACAGGTaGGTGTTTGTGGAACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLGDDMLLLGAATAVQGVGQLHR*VFVELL Trigger: GAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCC...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGCCAACCTCACAAAGGTaGCAGCTGAGAAGAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGPTSQR*QLRRAL Trigger: AAGTGCTCTTCTCAGCTGGCACCTTTGTGAGGTTGG...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGGGCCAACTGCACAGGTaGGTGTTTGTGGAACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKGQLHR*VFVELL Trigger: GAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCC...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGCCCTTGCTTCAGAATTaGGCAGTGGACTATCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKPLLQN*AVDYPA Trigger: GGCCGGATAGTCCACTGCCCAATTCTGAAGCAAGGG...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | TATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCCCTTGCTTCAGAATTaGGCAGTGGACTATCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: YAPAGCCHSCTGSKVKSCPLLQN*AVDYPA Trigger: GGCCGGATAGTCCACTGCCCAATTCTGAAGCAAGGG...ACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR TCA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGCACAAAGGTGCCAGCTaGGAAGAGCACTTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKHKGAS*EEHFFS Trigger: GCTGAAGAAGTGCTCTTCTCAGCTGGCACCTTTGTG...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTACCAACCTCACAAAGGTaGCAGCTGAGAAGAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: SLGDDMLLLGAATAVQGVPTSQR*QLRRAL Trigger: AAGTGCTCTTCTCAGCTGGCACCTTTGTGAGGTTGG...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR GCA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGCCAACCTCACAAAGGTaGCAGCTGAGAAGAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKPTSQR*QLRRAL Trigger: AAGTGCTCTTCTCAGCTGGCACCTTTGTGAGGTTGG...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTTCAGAATTGGGCAGTaGACTATCCGGCCTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: SLWETICSCWVLPQLYREFRIGQ*TIRPRI Trigger: AATTCTAGGCCGGATAGTCCACTGCCCAATTCTGAA...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTATTCAGAATTGGGCAGTaGACTATCCGGCCTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: SLGDDMLLLGAATAVQGVFRIGQ*TIRPRI Trigger: AATTCTAGGCCGGATAGTCCACTGCCCAATTCTGAA...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| 3UTR CAA 72 bp | GAAAGGAACAGACTCAGCAATTTTATTAGCCTGGAGTaGAAAGTCTCTGGGAGACGATATGCTCCTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ERNRLSNFISLE*KVSGRRYAPAG Trigger: CCCAGCAGGAGCATATCGTCTCCCAGAGACTTTCAACTCCAGGCTAATAAAATTGCTGAGTCTGTTCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009425.7 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS TCA 90 bp | GGAACTCCTCCAGAGCCACCTGTAGGCTCCTGCGCTGGGTCTCGCTaGGTTCGGGCTCTGTCCCACGTGTGCCCACTGTGCCCAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: GTPPEPPVGSCAGSR*VRALSHVCPLCPAI Trigger: TATGGCTGGGCACAGTGGGCACACGTGGGACAGAGCCCGAACTCAGCGAGACCCAGCGCAGGAGCCTACAGGTGGCTCTGGAGGAGTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS CCA 90 bp | GGGTGTTTGTGGAACTCCTCCAGAGCCACCTGTAGGCTCCTGCGCTaGGTCTCGCTGAGTTCGGGCTCTGTCCCACGTGTGCCCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: GCLWNSSRATCRLLR*VSLSSGSVPRVPTV Trigger: CACAGTGGGCACACGTGGGACAGAGCCCGAACTCAGCGAGACCCAGCGCAGGAGCCTACAGGTGGCTCTGGAGGAGTTCCACAAACACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS CCA 90 bp | TCCACACCGATCTCTTGGAAGGCCAACTGCACAGGTGGGTGTTTGTaGAACTCCTCCAGAGCCACCTGTAGGCTCCTGCGCTGGGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: STPISWKANCTGGCL*NSSRATCRLLRWVS Trigger: CGAGACCCAGCGCAGGAGCCTACAGGTGGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCCTTCCAAGAGATCGGTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGTGCACAGGTGGGTGTTaGTGGAACTCCTCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGCTGGC*WNSSRA Trigger: GGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCA...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTGCACAGGTGGGTGTTaGTGGAACTCCTCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SLWETICSCWVLPQLYRECTGGC*WNSSRA Trigger: GGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCA...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGGTCCACACCGATCTCTaGGAAGGCCAACTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGVHTDL*EGQLHR Trigger: CCTGTGCAGTTGGCCTTCCAAGAGATCGGTGTGGAC...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGGTCCACACCGATCTCTaGGAAGGCCAACTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: SLWETICSCWVLPQLYREVHTDL*EGQLHR Trigger: CCTGTGCAGTTGGCCTTCCAAGAGATCGGTGTGGAC...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTATGCACAGGTGGGTGTTaGTGGAACTCCTCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SLGDDMLLLGAATAVQGVCTGGC*WNSSRA Trigger: GGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCA...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGAGGATCCTGAGGCCCTaGCTTCAGAATTGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLWETICSCWVLPQLYRERILRP*LQNWAV Trigger: CACTGCCCAATTCTGAAGCAAGGGCCTCAGGATCCT...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS GCA 90 bp | AGCACTTCTTCAGCTCTGTCCACACCGATCTCTTGGAAGGCCAACTaGACAGGTGGGTGTTTGTGGAACTCCTCCAGAGCCACCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: STSSALSTPISWKAN*TGGCLWNSSRATCR Trigger: CCTACAGGTGGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCCTTCCAAGAGATCGGTGTGGACAGAGCTGAAGAAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGTCCTTCTTGGGGCAGTaGGTCTGCTGGAGCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGSFLGQ*VCWSLN Trigger: ATTTAAGCTCCAGCAGACCAACTGCCCCAAGAAGGA...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTCCTTCTTGGGGCAGTaGGTCTGCTGGAGCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: SLWETICSCWVLPQLYRESFLGQ*VCWSLN Trigger: ATTTAAGCTCCAGCAGACCAACTGCCCCAAGAAGGA...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTGTCTAGGGCTTCTCCCGTTTGGTTaGATTGTGCACTCCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PAGCCHSCTGSKVKSCLGLLPFG*IVHSGF Trigger: AAAGCCGGAGTGCACAATCAAACCAAACGGGAGAAG...CCCTAGACAGGACTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGCTTCTCCCGTTTGGTTaGATTGTGCACTCCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLWETICSCWVLPQLYRELLPFG*IVHSGF Trigger: AAAGCCGGAGTGCACAATCAAACCAAACGGGAGAAG...CTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS CCA 90 bp | CCAGCTGAGAAGAGCACTTCTTCAGCTCTGTCCACACCGATCTCTTaGAAGGCCAACTGCACAGGTGGGTGTTTGTGGAACTCCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: PAEKSTSSALSTPIS*KANCTGGCLWNSSR Trigger: TCTGGAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCCTTCCAAGAGATCGGTGTGGACAGAGCTGAAGAAGTGCTCTTCTCAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTATCCTTCTTGGGGCAGTaGGTCTGCTGGAGCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: SLGDDMLLLGAATAVQGVSFLGQ*VCWSLN Trigger: ATTTAAGCTCCAGCAGACCAACTGCCCCAAGAAGGA...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | TCTCTGGGAGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTACTTCTCCCGTTTGGTTaGATTGTGCACTCCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLGDDMLLLGAATAVQGVLLPFG*IVHSGF Trigger: AAAGCCGGAGTGCACAATCAAACCAAACGGGAGAAG...TACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCTCCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGTCCTTCTTGGGGCAGTaGGTCTGCTGGAGCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKSFLGQ*VCWSLN Trigger: ATTTAAGCTCCAGCAGACCAACTGCCCCAAGAAGGA...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS-3UTR CAA 90 bp | AGACGATATGCTCCTGCTGGGTGCTGCCACAGCTGTACAGGGAGTAAGGTGAAGCTTCTCCCGTTTGGTTaGATTGTGCACTCCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RRYAPAGCCHSCTGSKVKLLPFG*IVHSGF Trigger: AAAGCCGGAGTGCACAATCAAACCAAACGGGAGAAG...CTTCACCTTACTCCCTGTACAGCTGTGGCAGCACCCAGCAGGAGCATATCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS TCA 72 bp | CCAGAGCCACCTGTAGGCTCCTGCGCTGGGTCTCGCTaGGTTCGGGCTCTGTCCCACGTGTGCCCACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PEPPVGSCAGSR*VRALSHVCPLC Trigger: GCACAGTGGGCACACGTGGGACAGAGCCCGAACTCAGCGAGACCCAGCGCAGGAGCCTACAGGTGGCTCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS CAA 90 bp | CTGTCCACACCGATCTCTTGGAAGGCCAACTGCACAGGTGGGTGTTaGTGGAACTCCTCCAGAGCCACCTGTAGGCTCCTGCGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSTPISWKANCTGGC*WNSSRATCRLLRWV Trigger: GACCCAGCGCAGGAGCCTACAGGTGGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCCTTCCAAGAGATCGGTGTGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS CAA 72 bp | CCGATCTCTTGGAAGGCCAACTGCACAGGTGGGTGTTaGTGGAACTCCTCCAGAGCCACCTGTAGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PISWKANCTGGC*WNSSRATCRLL Trigger: CAGGAGCCTACAGGTGGCTCTGGAGGAGTTCCACAAACACCCACCTGTGCAGTTGGCCTTCCAAGAGATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 ENSMUST00000204267.3 ENSMUST00000204930.3 |
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| CDS CAA 72 bp | GTGGGGGTCTTCGCCAGCCTGTGCTATCTTAATGCATaGCAACTCCTGAGGATCCTGCTGAGGCCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VGVFASLCYLNA*QLLRILLRPLL Trigger: AAGCAAGGGCCTCAGCAGGATCCTCAGGAGTTGCAATGCATTAAGATAGCACAGGCTGGCGAAGACCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 |
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| CDS CAA 72 bp | ACTCCTGAGGATCCTGCTGAGGCCCTTGCTTCAGAATaGGGCAGTGGACTATCCGGCCTAGAATTTTACCCT | + |
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Preference number: 6 (lower is better) Translates to: TPEDPAEALASE*GSGLSGLEFYP Trigger: AGGGTAAAATTCTAGGCCGGATAGTCCACTGCCCAATTCTGAAGCAAGGGCCTCAGCAGGATCCTCAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009425.7 ENSMUST00000204182.2 |
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| CDS CAA 72 bp | GCAACTCCTGAGGATCCTGAGGCCCTTGCTTCAGAATaGGGCAGTGGACTATCCGGCCTAGAATTTTACCCT | + |
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Preference number: 6 (lower is better) Translates to: ATPEDPEALASE*GSGLSGLEFYP Trigger: AGGGTAAAATTCTAGGCCGGATAGTCCACTGCCCAATTCTGAAGCAAGGGCCTCAGGATCCTCAGGAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204267.3 ENSMUST00000204930.3 |
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