Pregenerated sensors for RARB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017491Ensembl transcript IDs: ENSMUST00000063750.8, ENSMUST00000223576.2, ENSMUST00000223976.2, ENSMUST00000225245.2, ENSMUST00000225594.2, ENSMUST00000225921.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTCACTAGTTTTCATTGCATCACAGAGAGGAGGCAGTAACCCATaGATGCCCCCTGTTGCCTGCAGTTGGATCTACTTGGACCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VSLVFIASQRGGSNP*MPPVACSWIYLDPC Trigger: ACAAGGGTCCAAGTAGATCCAACTGCAGGCAACAGGGGGCATGCATGGGTTACTGCCTCCTCTCTGTGATGCAATGAAAACTAGTGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| 3UTR TCA 90 bp | ACTGTACAGAGGCCCTGGTTCCTTACCGTGAGGCCTGGTTATTCATaGAAGCAGGACGTACAGTGGATGTACAGTGGTTTACTCCACAAC | + |
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Preference number: 1 (lower is better) Translates to: TVQRPWFLTVRPGYS*KQDVQWMYSGLLHN Trigger: GTTGTGGAGTAAACCACTGTACATCCACTGTACGTCCTGCTTTCATGAATAACCAGGCCTCACGGTAAGGAACCAGGGCCTCTGTACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR CCA 90 bp | GTCATCTTGTACTGTACAGAGGCCCTGGTTCCTTACCGTGAGGCCTaGTTATTCATGAAAGCAGGACGTACAGTGGATGTACAGTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: VILYCTEALVPYREA*LFMKAGRTVDVQWF Trigger: AAACCACTGTACATCCACTGTACGTCCTGCTTTCATGAATAACCAGGCCTCACGGTAAGGAACCAGGGCCTCTGTACAGTACAAGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR CCA 90 bp | ACGTACAGTGGATGTACAGTGGTTTACTCCACAACCTCGGTGTCTTaGTTATTGAGTATGCAAGACAAAAGAAAGCACCAACATACAGTA | + |
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Preference number: 1 (lower is better) Translates to: TYSGCTVVYSTTSVS*LLSMQDKRKHQHTV Trigger: TACTGTATGTTGGTGCTTTCTTTTGTCTTGCATACTCAATAACCAAGACACCGAGGTTGTGGAGTAAACCACTGTACATCCACTGTACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR TCA 90 bp | GTGGATGTACAGTGGTTTACTCCACAACCTCGGTGTCTTGGTTATTaGGTATGCAAGACAAAAGAAAGCACCAACATACAGTATAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VDVQWFTPQPRCLGY*VCKTKESTNIQYRK Trigger: CTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCATACTCAATAACCAAGACACCGAGGTTGTGGAGTAAACCACTGTACATCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGATGCAGGCGGCAGTACTaGCATCGGTTCCTAGTGACC | + |
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Preference number: 2 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRCRRQY*HRFLVT Trigger: GGTCACTAGGAACCGATGCCAGTACTGCCGCCTGCA...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGAGAGGGAAAGGTTTCCTaGTGGGCTTTCCGGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: IGPGGQRWNSWCIYPAGREGKVS*WAFRIF Trigger: GAAGATCCGGAAAGCCCACCAGGAAACCTTTCCCTC...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| 3UTR-3UTR GCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGACTCTCTGTGCATTCCTaGTTTGAAGGCTCCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRLSVHS*FEGSFF Trigger: AAAGAAGGAGCCTTCAAAGCAGGAATGCACAGAGAG...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| 3UTR-3UTR GCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGATCTCATAGCTCTCTGTaGATTCCTGCTTTGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRSHSSL*IPALKA Trigger: AGCCTTCAAAGCAGGAATGCACAGAGAGCTATGAGA...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTCTCTGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGGAGGCAGTAACCCATaGATGCCCCCTGTTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LFLWGLNAISIEVSLVFIGGSNP*MPPVAC Trigger: GCAGGCAACAGGGGGCATGCATGGGTTACTGCCTCC...AATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCAGAGAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGGCAGTAACCCATGCATaGCCCCTGTTGCCTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: WGLNAISIEVSLVFIASQAVTHA*PLLPAV Trigger: AACTGCAGGCAACAGGGGGCATGCATGGGTTACTGC...CTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGGCCTGGTTATTCATaGAAGCAGGACGTACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RASKSKEKLPHYLNQSVFRPGYS*KQDVQW Trigger: CCACTGTACGTCCTGCTTTCATGAATAACCAGGCCT...AAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTAGGCCTGGTTATTCATaGAAGCAGGACGTACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PGDSMEKGKQYMNIESTVRPGYS*KQDVQW Trigger: CCACTGTACGTCCTGCTTTCATGAATAACCAGGCCT...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGGATTAACTGAACTGGCAGTTTCAGTGATACAGAATTCTGCTAGTGCATTTTCAATCTGGAACTaGAGGTCCTGGGGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: DVGLTELAVSVIQNSASAFSIWN*RSWGMS Trigger: AGACATTCCCCAGGACCTTCAGTTCCAGATTGAAAA...TGCACTAGCAGAATTCTGTATCACTGAAACTGCCAGTTCAGTTAATCCAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTACAACCTCGGTGTCTTaGTTATTGAGTATGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: EKLPHYLNQSVFSVILYCTTSVS*LLSMQD Trigger: GTCTTGCATACTCAATAACCAAGACACCGAGGTTGT...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTAGAAGCTTTAAACTAGATTCTGGTGGCATGAAATGGCTGATTTTCAGATTTTCAATCTGGAACTaGAGGTCCTGGGGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: ESRSFKLDSGGMKWLIFRFSIWN*RSWGMS Trigger: AGACATTCCCCAGGACCTTCAGTTCCAGATTGAAAA...TCTGAAAATCAGCCATTTCATGCCACCAGAATCTAGTTTAAAGCTTCTACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGACAAAAGAAAGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTACTGGGTCTTTGCCATaGATCTTGACTATTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CKTKESTNIQYRKNRAVLTGSLP*ILTIQR Trigger: TCTCTGAATAGTCAAGATGCATGGCAAAGACCCAGT...AAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATAACTGGGTCTTTGCCATaGATCTTGACTATTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSQCTNRASGTSQTFANITGSLP*ILTIQR Trigger: TCTCTGAATAGTCAAGATGCATGGCAAAGACCCAGT...TATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTAAACCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTACAACCTCGGTGTCTTaGTTATTGAGTATGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TVKPSQCTNRASGTSQTFTTSVS*LLSMQD Trigger: GTCTTGCATACTCAATAACCAAGACACCGAGGTTGT...AAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGGTTTAACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATATTGCTGATTATCCTGTaGTATTTCTCCAATGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PSQCTNRASGTSQTFANILLIIL*YFSNGL Trigger: CAAGCCATTGGAGAAATATCACAGGATAATCAGCAA...TATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| 3UTR CCA 72 bp | AATTTGTCCCAGAGGCCCAAGTCCAATCGGACCCGGTaGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: NLSQRPKSNRTR*SALEFVVYLPS Trigger: GCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGATTGGACTTGGGCCTCTGGGACAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| 3UTR TCA 72 bp | AAGCATCAAGACTGGGGGAAATCCCAGGATCAGGCCTaGGTCAGCAAGGACACTGGGCTACTAGAGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KHQDWGKSQDQA*VSKDTGLLESR Trigger: TCTGGACTCTAGTAGCCCAGTGTCCTTGCTGACTCAGGCCTGATCCTGGGATTTCCCCCAGTCTTGATGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| 3UTR TCA 72 bp | CATTCTCCCAGAGCTGTCAGTCTGCATCATGGTGATTaGACAAGGCCAGAGGAGGCCACTTGCCCATACCTT | + |
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Preference number: 3 (lower is better) Translates to: HSPRAVSLHHGD*TRPEEATCPYL Trigger: AAGGTATGGGCAAGTGGCCTCCTCTGGCCTTGTTCAATCACCATGATGCAGACTGACAGCTCTGGGAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| 3UTR TCA 72 bp | AGGCCCTGGTTCCTTACCGTGAGGCCTGGTTATTCATaGAAGCAGGACGTACAGTGGATGTACAGTGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: RPWFLTVRPGYS*KQDVQWMYSGL Trigger: TAAACCACTGTACATCCACTGTACGTCCTGCTTTCATGAATAACCAGGCCTCACGGTAAGGAACCAGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR CCA 72 bp | TACTGTACAGAGGCCCTGGTTCCTTACCGTGAGGCCTaGTTATTCATGAAAGCAGGACGTACAGTGGATGTA | + |
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Preference number: 3 (lower is better) Translates to: YCTEALVPYREA*LFMKAGRTVDV Trigger: TACATCCACTGTACGTCCTGCTTTCATGAATAACCAGGCCTCACGGTAAGGAACCAGGGCCTCTGTACAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR-3UTR CAA 90 bp | AATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGAGAGGAGGCCCCTGTTGCCTGCAGTaGGATCTACTTGGACCCTTG | + |
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Preference number: 3 (lower is better) Translates to: NAISIEVSLVFIASQRGGPCCLQ*DLLGPL Trigger: CAAGGGTCCAAGTAGATCCAACTGCAGGCAACAGGG...GCCTCCTCTCTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTCTGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCCATGCATGCCCCCTGTaGCCTGCAGTTGGATCTACT | + |
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Preference number: 3 (lower is better) Translates to: VSLGFECHLNRGVTSFHCHACPL*PAVGST Trigger: AGTAGATCCAACTGCAGGCAACAGGGGGCATGCATG...GCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCAGAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| 3UTR CCA 72 bp | GGATGTACAGTGGTTTACTCCACAACCTCGGTGTCTTaGTTATTGAGTATGCAAGACAAAAGAAAGCACCAA | + |
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Preference number: 3 (lower is better) Translates to: GCTVVYSTTSVS*LLSMQDKRKHQ Trigger: TTGGTGCTTTCTTTTGTCTTGCATACTCAATAACCAAGACACCGAGGTTGTGGAGTAAACCACTGTACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| 3UTR CCA 72 bp | GTTTCAGTGATACAGAATTCTGCTAGTGCAGTGAAGTaGTGTACTCTATCTGGGCAACATAAGGGAAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: VSVIQNSASAVK*CTLSGQHKGKN Trigger: ATTCTTTCCCTTATGTTGCCCAGATAGAGTACACCACTTCACTGCACTAGCAGAATTCTGTATCACTGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR TCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGAACCCCTCGCAGGCACTaGCGCCATAGTGGTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRTPRRH*RHSGSP Trigger: CGGGCTACCACTATGGCGTCAGTGCCTGCGAGGGGT...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| CDS-3UTR CCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGAAGGAGGAAGTGGAGATaGTGGGCTCGGGACGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRRRKWR*WARDEL Trigger: GAGCTCGTCCCGAGCCCACCATCTCCACTTCCTCCT...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| CDS-3UTR CCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGACGAGCTCCTCAGAGCTaGTACTCTGTGTCTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRRAPQS*YSVSRW Trigger: CCATCGAGACACAGAGTACCAGCTCTGAGGAGCTCG...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| CDS-3UTR CCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGACCCGATGACTTGTCCTaGCAAACGAAGCAGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRPDDLS*QTKQGL Trigger: CAAGCCCTGCTTCGTTTGCCAGGACAAGTCATCGGG...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGTCACTAGTTTTCATTGCATCACAGAGAGGAGGCAGTAACCCATGCATGACCCCTCGCAGGCACTaGCGCCATAGTGGTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EVSLVFIASQRGGSNPCMTPRRH*RHSGSP Trigger: CGGGCTACCACTATGGCGTCAGTGCCTGCGAGGGGT...CATGCATGGGTTACTGCCTCCTCTCTGTGATGCAATGAAAACTAGTGACACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| CDS-3UTR TCA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGAATAGTGGTAGCCCGATaGCTTGTCCTGGCAAACGAA | + |
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Preference number: 4 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRIVVAR*LVLANE Trigger: TTCGTTTGCCAGGACAAGTCATCGGGCTACCACTAT...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| CDS-3UTR CCA 90 bp | ACTAGTGCTTACATGAGAACTCAGAAGCCGACACTTGAGTCTGTCAACCACTCAAGGAGGAAGTGGAGATaGTGGGCTCGGGACGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSAYMRTQKPTLESVNHSRRKWR*WARDEL Trigger: GAGCTCGTCCCGAGCCCACCATCTCCACTTCCTCCT...TGAGTGGTTGACAGACTCAAGTGTCGGCTTCTGAGTTCTCATGTAAGCACTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR CCA 90 bp | TGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGAGAGGAGGCAGAGGAGGAAGTGGAGATaGTGGGCTCGGGACGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CHLNRGVTSFHCITERRQRRKWR*WARDEL Trigger: GAGCTCGTCCCGAGCCCACCATCTCCACTTCCTCCT...CTGCCTCCTCTCTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| CDS-3UTR TCA 90 bp | CTAAATCATCTCAACTGGGTCTTTGCCATGCATCTTGACTATTCAGAGAGGAAAACCCCTCGCAGGCACTaGCGCCATAGTGGTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LNHLNWVFAMHLDYSERKTPRRH*RHSGSP Trigger: CGGGCTACCACTATGGCGTCAGTGCCTGCGAGGGGT...TTTCCTCTCTGAATAGTCAAGATGCATGGCAAAGACCCAGTTGAGATGATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR GCA 90 bp | GTTTCTCTGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCCCTTTTCCTGCAGCATaGAGGAGGAAGGGCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: VSLGFECHLNRGVTSFHCPFPAA*RRKGSR Trigger: CCGCGAGCCCTTCCTCCTGCATGCTGCAGGAAAAGG...GCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCAGAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| CDS-3UTR CCA 90 bp | GGATGTACAGTGGTTTACTCCACAACCTCGGTGTCTTGGTTATTGAGTATGCAATGCAGGCGGCAGTACTaGCATCGGTTCCTAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: GCTVVYSTTSVSWLLSMQCRRQY*HRFLVT Trigger: GGTCACTAGGAACCGATGCCAGTACTGCCGCCTGCA...TTGCATACTCAATAACCAAGACACCGAGGTTGTGGAGTAAACCACTGTACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR TCA 90 bp | ACTGTTAAACCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTACCCCTCGCAGGCACTaGCGCCATAGTGGTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TVKPSQCTNRASGTSQTFTPRRH*RHSGSP Trigger: CGGGCTACCACTATGGCGTCAGTGCCTGCGAGGGGT...AAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGGTTTAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCTTGAGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCACCTTTTCCTGCAGCATaGAGGAGGAAGGGCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: MKLESIKKQGEASTLLKPPFPAA*RRKGSR Trigger: CCGCGAGCCCTTCCTCCTGCATGCTGCAGGAAAAGG...TGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCTCAAGCTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CCA 90 bp | CTAAATCATCTCAACTGGGTCTTTGCCATGCATCTTGACTATTCAGAGAGGAAAAGGAGGAAGTGGAGATaGTGGGCTCGGGACGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LNHLNWVFAMHLDYSERKRRKWR*WARDEL Trigger: GAGCTCGTCCCGAGCCCACCATCTCCACTTCCTCCT...TTTCCTCTCTGAATAGTCAAGATGCATGGCAAAGACCCAGTTGAGATGATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CCA 90 bp | GGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGAGTGCAGGCGGCAGTACTaGCATCGGTTCCTAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: GFECHLNRGVTSFHCITECRRQY*HRFLVT Trigger: GGTCACTAGGAACCGATGCCAGTACTGCCGCCTGCA...CTCTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACACTGCCCGGGACTCACTaGCAGAACATCCATACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGFECHLNRGVTSFHCITLPGTH*QNIHTV Trigger: GACTGTATGGATGTTCTGTCAGTGAGTCCCGGGCAG...TGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCTCTGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTTGCTGCCATTCGGCCTaGGTGAATCCACTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLWGLNAISIEVSLVFICCHSA*VNPLRQ Trigger: CTGCCTCAGTGGATTCACCCAGGCCGAATGGCAGCA...AATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCAGAGAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGCTTGAGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCATGCTGCCATTCGGCCTaGGTGAATCCACTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKLESIKKQGEASTLLKPCCHSA*VNPLRQ Trigger: CTGCCTCAGTGGATTCACCCAGGCCGAATGGCAGCA...TGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCTCAAGCTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCTGCAGGCGGCAGTACTaGCATCGGTTCCTAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVCRRQY*HRFLVT Trigger: GGTCACTAGGAACCGATGCCAGTACTGCCGCCTGCA...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTTGTTCTCCACTGAGCTaGGGGACACGCTGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCCSPLS*GTRWDC Trigger: ACAGTCCCAGCGTGTCCCCCAGCTCAGTGGAGAACA...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCTGTTCTCCACTGAGCTaGGGGACACGCTGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVCSPLS*GTRWDC Trigger: ACAGTCCCAGCGTGTCCCCCAGCTCAGTGGAGAACA...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTCTGCCCGGGACTCACTaGCAGAACATCCATACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCLPGTH*QNIHTV Trigger: GACTGTATGGATGTTCTGTCAGTGAGTCCCGGGCAG...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAACAGCTGTCTGACTGTTTCTCTGGGGTTTGAATGCCATCTCAATAGATTGAGAGCCTTTTCCTaGAGCATGCAGGAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPNSCLTVSLGFECHLNRLRAFS*SMQEEG Trigger: CCCTTCCTCCTGCATGCTGCAGGAAAAGGCTCTCAA...TCTATTGAGATGGCATTCAAACCCCAGAGAAACAGTCAGACAGCTGTTAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
||
| CDS-3UTR CCA 90 bp | CTAAATCATCTCAACTGGGTCTTTGCCATGCATCTTGACTATTCAGAGAGGAAACCCGATGACTTGTCCTaGCAAACGAAGCAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNHLNWVFAMHLDYSERKPDDLS*QTKQGL Trigger: CAAGCCCTGCTTCGTTTGCCAGGACAAGTCATCGGG...TTTCCTCTCTGAATAGTCAAGATGCATGGCAAAGACCCAGTTGAGATGATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGAGAGGCCCGATGACTTGTCCTaGCAAACGAAGCAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FECHLNRGVTSFHCITERPDDLS*QTKQGL Trigger: CAAGCCCTGCTTCGTTTGCCAGGACAAGTCATCGGG...CCTCTCTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTAGCTGGGGGACACGCTaGGACTGTGCTCTGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCSWGTR*DCALLY Trigger: ATATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCT...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR GCA 90 bp | ACATACAGTATAGAAAGAACAGAGCCGTACTTCTATATGTACAAAGTCTTCAGACCTTTTCCTGCAGCATaGAGGAGGAAGGGCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TYSIERTEPYFYMYKVFRPFPAA*RRKGSR Trigger: CCGCGAGCCCTTCCTCCTGCATGCTGCAGGAAAAGG...TCTGAAGACTTTGTACATATAGAAGTACGGCTCTGTTCTTTCTATACTGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTTTGAGAGCCTTTTCCTaGAGCATGCAGGAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCLRAFS*SMQEEG Trigger: CCCTTCCTCCTGCATGCTGCAGGAAAAGGCTCTCAA...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTCTATATGTACAAAGTTGCTGCCATTCGGCCTaGGTGAATCCACTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STNIQYRKNRAVLLYVQSCCHSA*VNPLRQ Trigger: CTGCCTCAGTGGATTCACCCAGGCCGAATGGCAGCA...ACTTTGTACATATAGAAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAGACAAAAGAAAGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTCCCGATGACTTGTCCTaGCAAACGAAGCAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CKTKESTNIQYRKNRAVLPDDLS*QTKQGL Trigger: CAAGCCCTGCTTCGTTTGCCAGGACAAGTCATCGGG...AAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCCAGCGCTGGAATTCGTaGTGTATTTACCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVQRWNS*CIYPAG Trigger: GCCAGCTGGGTAAATACACCACGAATTCCAGCGCTG...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | GATGTTGGATTAACTGAACTGGCAGTTTCAGTGATACAGAATTCTGCTAGTGCATTGAGCAGGGTGATCTaGTCTGCGATGGTCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: DVGLTELAVSVIQNSASALSRVI*SAMVRP Trigger: AGGTCTGACCATCGCAGACCAGATCACCCTGCTCAA...TGCACTAGCAGAATTCTGTATCACTGAAACTGCCAGTTCAGTTAATCCAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | CTAAATCATCTCAACTGGGTCTTTGCCATGCATCTTGACTATTCAGAGAGGAAATTGAGCAGGGTGATCTaGTCTGCGATGGTCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LNHLNWVFAMHLDYSERKLSRVI*SAMVRP Trigger: AGGTCTGACCATCGCAGACCAGATCACCCTGCTCAA...TTTCCTCTCTGAATAGTCAAGATGCATGGCAAAGACCCAGTTGAGATGATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAGACAAAAGAAAGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTAGCTGGGGGACACGCTaGGACTGTGCTCTGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: CKTKESTNIQYRKNRAVLSWGTR*DCALLY Trigger: ATATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCT...AAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGTAGAAGCTTTAAACTAGATTCTGGTGGCATGAAATGGCTGATTTTCAGACTGCCCGGGACTCACTaGCAGAACATCCATACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESRSFKLDSGGMKWLIFRLPGTH*QNIHTV Trigger: GACTGTATGGATGTTCTGTCAGTGAGTCCCGGGCAG...TCTGAAAATCAGCCATTTCATGCCACCAGAATCTAGTTTAAAGCTTCTACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTCCAGCATTTCCTGAATaGGAGGTGGCATTGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCPAFPE*EVALIQ Trigger: CTGGATCAATGCCACCTCTCATTCAGGAAATGCTGG...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAAACCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTCGAGCTCCTCAGAGCTaGTACTCTGTGTCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TVKPSQCTNRASGTSQTFRAPQS*YSVSRW Trigger: CCATCGAGACACAGAGTACCAGCTCTGAGGAGCTCG...AAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGGTTTAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTGAGGGAAAGGTTTCCTaGTGGGCTTTCCGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGDSMEKGKQYMNIESTVEGKVS*WAFRIF Trigger: GAAGATCCGGAAAGCCCACCAGGAAACCTTTCCCTC...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTCAGCGCTGGAATTCGTaGTGTATTTACCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGDSMEKGKQYMNIESTVQRWNS*CIYPAG Trigger: GCCAGCTGGGTAAATACACCACGAATTCCAGCGCTG...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGCTTGAGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGGTTCCTCAAGGTCCTaGCGGTCTCCACAGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MKLESIKKQGEASTLLKPGSSRS*RSPQIK Trigger: TTTAATCTGTGGAGACCGCCAGGACCTTGAGGAACC...TGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCTCAAGCTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCTGCTATATTCCCACTTaGACTTGGGGTCAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVCYIPT*TWGQGF Trigger: GAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCA...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTTGCTATATTCCCACTTaGACTTGGGGTCAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RASKSKEKLPHYLNQSVFCYIPT*TWGQGF Trigger: GAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCA...AAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTCTATATGTACAAAGTGAGGGAAAGGTTTCCTaGTGGGCTTTCCGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STNIQYRKNRAVLLYVQSEGKVS*WAFRIF Trigger: GAAGATCCGGAAAGCCCACCAGGAAACCTTTCCCTC...ACTTTGTACATATAGAAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | GATGTTGGATTAACTGAACTGGCAGTTTCAGTGATACAGAATTCTGCTAGTGCAGTGTATTTACCCAGCTaGCAGAGTGAGGGAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DVGLTELAVSVIQNSASAVYLPS*QSEGKV Trigger: AACCTTTCCCTCACTCTGCCAGCTGGGTAAATACAC...TGCACTAGCAGAATTCTGTATCACTGAAACTGCCAGTTCAGTTAATCCAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTGGTTCCTCAAGGTCCTaGCGGTCTCCACAGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGDSMEKGKQYMNIESTVGSSRS*RSPQIK Trigger: TTTAATCTGTGGAGACCGCCAGGACCTTGAGGAACC...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTCTTGTCTACTTTTGTTaGTTCCTCAAGGTCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCLVYFC*FLKVLA Trigger: CGCCAGGACCTTGAGGAACCAACAAAAGTAGACAAG...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGGGGAAAACAACTCTTTaGACATGCCCACTTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGLNAISIEVSLVFIASQGKTTL*TCPLQS Trigger: GCTTTGAAGTGGGCATGTCCAAAGAGTTGTTTTCCC...CTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
||
| CDS-3UTR TCA 90 bp | GATATTTCTCCAATGGCTTGTGAACAGGTAAACAAACTTATTAACACTGGACAGATAGTGGTAGCCCGATaGCTTGTCCTGGCAAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: DISPMACEQVNKLINTGQIVVAR*LVLANE Trigger: TTCGTTTGCCAGGACAAGTCATCGGGCTACCACTAT...CTGTCCAGTGTTAATAAGTTTGTTTACCTGTTCACAAGCCATTGGAGAAATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTTTAAACAGATGGCACTaGGAAGGCCTGTTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCLNRWH*EGLFLC Trigger: ACACAGAAACAGGCCTTCTCAGTGCCATCTGTTTAA...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTTTCTCCAGCATTTCCTaGATGAGAGGTGGCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCFSSIS*MRGGID Trigger: ATCAATGCCACCTCTCATTCAGGAAATGCTGGAGAA...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCCTCTCTGTGCATTCCTaGTTTGAAGGCTCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVLSVHS*FEGSFF Trigger: AAAGAAGGAGCCTTCAAAGCAGGAATGCACAGAGAG...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTTCTCATAGCTCTCTGTaGATTCCTGCTTTGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RASKSKEKLPHYLNQSVFSHSSL*IPALKA Trigger: AGCCTTCAAAGCAGGAATGCACAGAGAGCTATGAGA...AAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCCATGGTGTCTTGCTCTaGGGTATACCTGGTACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVHGVLL*GIPGTN Trigger: ATTTGTACCAGGTATACCCCAGAGCAAGACACCATG...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTTTAAACAGATGGCACTaGGAAGGCCTGTTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGDSMEKGKQYMNIESTVLNRWH*EGLFLC Trigger: ACACAGAAACAGGCCTTCTCAGTGCCATCTGTTTAA...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATATCAAAAACGAACACCAGCATTTCCTGAATaGGAGGTGGCATTGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTELVVHHRLLLIYQKRTPAFPE*EVALIQ Trigger: CTGGATCAATGCCACCTCTCATTCAGGAAATGCTGG...TGTTCGTTTTTGATATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAAACCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGTGTATTTACCCAGCTaGCAGAGTGAGGGAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVKPSQCTNRASGTSQTFVYLPS*QSEGKV Trigger: AACCTTTCCCTCACTCTGCCAGCTGGGTAAATACAC...AAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGGTTTAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAAACCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTCTTGTCTACTTTTGTTaGTTCCTCAAGGTCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVKPSQCTNRASGTSQTFLVYFC*FLKVLA Trigger: CGCCAGGACCTTGAGGAACCAACAAAAGTAGACAAG...AAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGGTTTAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTAATGAGAGGTGGCATTaGTCCAGGAATTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKLPHYLNQSVFSVILYCNERWH*SRNFHF Trigger: AAAATGGAAATTCCTGGATCAATGCCACCTCTCATT...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
||
| CDS-3UTR GCA 90 bp | AGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTCTATATGTACAAAGTCTCTCTGTGCATTCCTaGTTTGAAGGCTCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STNIQYRKNRAVLLYVQSLSVHS*FEGSFF Trigger: AAAGAAGGAGCCTTCAAAGCAGGAATGCACAGAGAG...ACTTTGTACATATAGAAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR TCA 90 bp | TGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATATCAAAAACGCCAGCATTGTGCATCTaGGTTCGATTTAGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTNRASGTSQTFANISKTPALCI*VRFSVR Trigger: CCTTACACTAAATCGAACTCAGATGCACAATGCTGG...CGTTTTTGATATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR TCA 90 bp | TGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATATCAAAAACGTTCTCCAGCATTTCCTaGATGAGAGGTGGCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CTNRASGTSQTFANISKTFSSIS*MRGGID Trigger: ATCAATGCCACCTCTCATTCAGGAAATGCTGGAGAA...CGTTTTTGATATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR TCA 90 bp | CCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATATGCTGCGGAGATCTGTaGTTTTCATTAAGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQCTNRASGTSQTFANICCGDL*FSLRSL Trigger: CAAAGATCTTAATGAAAATCACAGATCTCCGCAGCA...TATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR TCA 90 bp | AGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTCTATATGTACAAAGTTGCTGCGGAGATCTGTaGTTTTCATTAAGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STNIQYRKNRAVLLYVQSCCGDL*FSLRSL Trigger: CAAAGATCTTAATGAAAATCACAGATCTCCGCAGCA...ACTTTGTACATATAGAAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR TCA 90 bp | GAAAGTAGAAGCTTTAAACTAGATTCTGGTGGCATGAAATGGCTGATTTTCAGAAATGAGAGGTGGCATTaGTCCAGGAATTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESRSFKLDSGGMKWLIFRNERWH*SRNFHF Trigger: AAAATGGAAATTCCTGGATCAATGCCACCTCTCATT...TCTGAAAATCAGCCATTTCATGCCACCAGAATCTAGTTTAAAGCTTCTACTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS CCA 90 bp | CCCACACTGGCTGGTGATGGGGTGCTGCATCCACTGGGAGGTGGGTaGCCATGGAGCCCATGGAGTGGAGGCAGGGAGAGTCCTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PTLAGDGVLHPLGGG*PWSPWSGGRESPLM Trigger: CATCAGAGGACTCTCCCTGCCTCCACTCCATGGGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCAGTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223976.2 |
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| CDS TCA 90 bp | ACTTCCACCAGTTGTCCTCTGACATGCCTGCCCCACACTGGCTGGTaGTGGGGTGCTGCATCCACTGGGAGGTGGGTGGCCATGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTSCPLTCLPHTGW*WGAASTGRWVAMEP Trigger: GGGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCAGTGTGGGGCAGGCATGTCAGAGGACAACTGGTGGAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223976.2 |
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| CDS CCA 90 bp | TCGATGGTGGCTGGTGATGGGGTGCTGCATCCACTGGGAGGTGGGTaGCCATGGAGCCCATGGAGTGGAGGCAGGGAGAGTCCTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SMVAGDGVLHPLGGG*PWSPWSGGRESPLM Trigger: CATCAGAGGACTCTCCCTGCCTCCACTCCATGGGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCACCATCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225245.2 |
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| CDS-3UTR CAA 90 bp | ATCGGACCCGGTGGTCAGCGCTGGAATTCGTGGTGTATTTACCCAGCTGGCAGACTGCGGAAAAAGCCCTaGCACCCCTCGCAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: IGPGGQRWNSWCIYPAGRLRKKP*HPSQAL Trigger: CAGTGCCTGCGAGGGGTGCAAGGGCTTTTTCCGCAG...TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223576.2 |
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| CDS GCA 90 bp | CTGACTCCACTGTTCTCCACTGAGCTGGGGGACACGCTGGGACTGTaGTCTGCTATATTCCCACTTGAACTTGGGGTCAAGGGTTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LTPLFSTELGDTLGL*SAIFPLELGVKGSC Trigger: ACATGAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCTCAGTGGAGAACAGTGGAGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCCTGCGGAAAAAGCCCTaGCACCCCTCGCAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVLRKKP*HPSQAL Trigger: CAGTGCCTGCGAGGGGTGCAAGGGCTTTTTCCGCAG...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTGGGGTTTGAATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCCCACTGAGGCAGGCTTaGAGAGCCTTTTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLGFECHLNRGVTSFHCPLRQA*RAFSCS Trigger: GCTGCAGGAAAAGGCTCTCAAAGCCTGCCTCAGTGG...GCAATGAAAACTAGTGACACCTCTATTGAGATGGCATTCAAACCCCAGAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| CDS-3UTR CAA 90 bp | AGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTCCACTGAGGCAGGCTTaGAGAGCCTTTTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RASKSKEKLPHYLNQSVFPLRQA*RAFSCS Trigger: GCTGCAGGAAAAGGCTCTCAAAGCCTGCCTCAGTGG...AAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTCCACTGAGGCAGGCTTaGAGAGCCTTTTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGDSMEKGKQYMNIESTVPLRQA*RAFSCS Trigger: GCTGCAGGAAAAGGCTCTCAAAGCCTGCCTCAGTGG...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR CAA 90 bp | GATGTTGGATTAACTGAACTGGCAGTTTCAGTGATACAGAATTCTGCTAGTGCAAAAGGCAGGAGCTGGTaGGCAAAGGTGAACACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DVGLTELAVSVIQNSASAKGRSW*AKVNTR Trigger: CCTTGTGTTCACCTTTGCCAACCAGCTCCTGCCTTT...TGCACTAGCAGAATTCTGTATCACTGAAACTGCCAGTTCAGTTAATCCAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR CAA 90 bp | AATGCCATCTCAATAGAGGTGTCACTAGTTTTCATTGCATCACAGAGAGGAGGCGGGGAAAACAACTCTTaGGACATGCCCACTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NAISIEVSLVFIASQRGGGENNS*DMPTSK Trigger: CTTTGAAGTGGGCATGTCCAAAGAGTTGTTTTCCCC...GCCTCCTCTCTGTGATGCAATGAAAACTAGTGACACCTCTATTGAGATGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225594.2 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCGCTTGTCTACTTTTGTaGGTTCCTCAAGGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVACLLL*VPQGPG Trigger: GCCAGGACCTTGAGGAACCAACAAAAGTAGACAAGC...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGCTTGAGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGGAGCTTGTCTACTTTaGTTGGTTCCTCAAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MKLESIKKQGEASTLLKPGACLL*LVPQGP Trigger: AGGACCTTGAGGAACCAACAAAAGTAGACAAGCTCC...TGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCTCAAGCTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | AGAGCATCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTTATTCCCACTTGAACTaGGGGTCAAGGGTTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RASKSKEKLPHYLNQSVFYSHLN*GSRVHV Trigger: GACATGAACCCTTGACCCCAAGTTCAAGTGGGAATA...AAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGATGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCATCTTGTACTGTTATTCCCACTTGAACTaGGGGTCAAGGGTTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKLPHYLNQSVFSVILYCYSHLN*GSRVHV Trigger: GACATGAACCCTTGACCCCAAGTTCAAGTGGGAATA...ACAGTACAAGATGACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGCAAGGAGAAGCTTCCACACTACTTAAACCAGAGTGTCTTTAGTGTCCTGCTATATTCCCACTaGAACTTGGGGTCAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKSKEKLPHYLNQSVFSVLLYSH*NLGSRV Trigger: AACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAG...GACACTAAAGACACTCTGGTTTAAGTAGTGTGGAAGCTTCTCCTTGCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | CCATCTCAATGTACAAACAGAGCTAGTGGTACATCACAGACTTTTGCTAATATAGCTTGTCTACTTTTGTaGGTTCCTCAAGGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSQCTNRASGTSQTFANIACLLL*VPQGPG Trigger: GCCAGGACCTTGAGGAACCAACAAAAGTAGACAAGC...TATATTAGCAAAAGTCTGTGATGTACCACTAGCTCTGTTTGTACATTGAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS-3UTR CAA 90 bp | TGCAAGACAAAAGAAAGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTGGAGCTTGTCTACTTTaGTTGGTTCCTCAAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CKTKESTNIQYRKNRAVLGACLL*LVPQGP Trigger: AGGACCTTGAGGAACCAACAAAAGTAGACAAGCTCC...AAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | TGCAAGACAAAAGAAAGCACCAACATACAGTATAGAAAGAACAGAGCCGTACTTAGTGGTTCTTGGAGCTaGTCTACTTTTGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKTKESTNIQYRKNRAVLSGSWS*STFVGS Trigger: GGAACCAACAAAAGTAGACAAGCTCCAAGAACCACT...AAGTACGGCTCTGTTCTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | GAAAGTAGAAGCTTTAAACTAGATTCTGGTGGCATGAAATGGCTGATTTTCAGACTGCTATATTCCCACTaGAACTTGGGGTCAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESRSFKLDSGGMKWLIFRLLYSH*NLGSRV Trigger: AACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAG...TCTGAAAATCAGCCATTTCATGCCACCAGAATCTAGTTTAAAGCTTCTACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | GATGTTGGATTAACTGAACTGGCAGTTTCAGTGATACAGAATTCTGCTAGTGCATTTTCATTAAGATCTTaGGAAACATGTGAGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVGLTELAVSVIQNSASAFSLRS*ETCEAC Trigger: GCAAGCCTCACATGTTTCCAAAGATCTTAATGAAAA...TGCACTAGCAGAATTCTGTATCACTGAAACTGCCAGTTCAGTTAATCCAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAGACTCCATGGAAAAAGGTAAACAGTATATGAACATAGAAAGCACTGTTTTTTCATTAAGATCTTaGGAAACATGTGAGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGDSMEKGKQYMNIESTVFSLRS*ETCEAC Trigger: GCAAGCCTCACATGTTTCCAAAGATCTTAATGAAAA...AACAGTGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000063750.8 |
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| CDS GCA 72 bp | GACATGCCTGCCCCACACTGGCTGGTGATGGGGTGCTaGATCCACTGGGAGGTGGGTGGCCATGGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DMPAPHWLVMGC*IHWEVGGHGAH Trigger: ATGGGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCAGTGTGGGGCAGGCATGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223976.2 |
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| CDS GCA 72 bp | TCTGACATGCCTGCCCCACACTGGCTGGTGATGGGGTaGTGCATCCACTGGGAGGTGGGTGGCCATGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SDMPAPHWLVMG*CIHWEVGGHGA Trigger: GGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCAGTGTGGGGCAGGCATGTCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223976.2 |
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| CDS CCA 72 bp | GCTGGTGATGGGGTGCTGCATCCACTGGGAGGTGGGTaGCCATGGAGCCCATGGAGTGGAGGCAGGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGDGVLHPLGGG*PWSPWSGGRES Trigger: ACTCTCCCTGCCTCCACTCCATGGGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223976.2 ENSMUST00000225245.2 |
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| CDS TCA 72 bp | AGTTGTCCTCTGACATGCCTGCCCCACACTGGCTGGTaGTGGGGTGCTGCATCCACTGGGAGGTGGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCPLTCLPHTGW*WGAASTGRWVA Trigger: GGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCAGTGTGGGGCAGGCATGTCAGAGGACAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223976.2 |
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| CDS CAA 90 bp | TGCCGGTGCTGCCATTCGGCCTGGGTGAATCCACTGAGGCAGGCTTaGAGAGCCTTTTCCTGCAGCATGCAGGAGGAAGGGCTCGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRCCHSAWVNPLRQA*RAFSCSMQEEGLAV Trigger: CACCGCGAGCCCTTCCTCCTGCATGCTGCAGGAAAAGGCTCTCAAAGCCTGCCTCAGTGGATTCACCCAGGCCGAATGGCAGCACCGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063750.8 ENSMUST00000225594.2 ENSMUST00000225921.2 |
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| CDS GCA 72 bp | TGGTACTCTGTGTCTCGATGGTGGCTGGTGATGGGGTaGTGCATCCACTGGGAGGTGGGTGGCCATGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WYSVSRWWLVMG*CIHWEVGGHGA Trigger: GGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCACCATCGAGACACAGAGTACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225245.2 |
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| CDS GCA 72 bp | TACTCTGTGTCTCGATGGTGGCTGGTGATGGGGTGCTaGATCCACTGGGAGGTGGGTGGCCATGGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YSVSRWWLVMGC*IHWEVGGHGAH Trigger: ATGGGCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCACCATCGAGACACAGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225245.2 |
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| CDS CAA 72 bp | TGCCATTCGGCCTGGGTGAATCCACTGAGGCAGGCTTaGAGAGCCTTTTCCTGCAGCATGCAGGAGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CHSAWVNPLRQA*RAFSCSMQEEG Trigger: CCCTTCCTCCTGCATGCTGCAGGAAAAGGCTCTCAAAGCCTGCCTCAGTGGATTCACCCAGGCCGAATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063750.8 ENSMUST00000225594.2 ENSMUST00000225921.2 |
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| CDS GCA 72 bp | CTGTTCTCCACTGAGCTGGGGGACACGCTGGGACTGTaGTCTGCTATATTCCCACTTGAACTTGGGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LFSTELGDTLGL*SAIFPLELGVK Trigger: CTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCTCAGTGGAGAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS CAA 90 bp | CTGAGCTGGGGGACACGCTGGGACTGTGCTCTGCTATATTCCCACTaGAACTTGGGGTCAAGGGTTCATGTCCTTCAGAATTCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSWGTRWDCALLYSH*NLGSRVHVLQNSPA Trigger: TGCTGGAGAATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS CAA 90 bp | TGGGGGACACGCTGGGACTGTGCTCTGCTATATTCCCACTTGAACTaGGGGTCAAGGGTTCATGTCCTTCAGAATTCTCCAGCATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WGTRWDCALLYSHLN*GSRVHVLQNSPAFP Trigger: AGGAAATGCTGGAGAATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS GCA 72 bp | GGCTGCATTCAAGCTTGGTGTCCACTTGGTAGAAGCTaGAAACTGACTTCCACCAGTTGTCCTCTGACATGC | + |
|
Preference number: 6 (lower is better) Translates to: GCIQAWCPLGRS*KLTSTSCPLTC Trigger: GCATGTCAGAGGACAACTGGTGGAAGTCAGTTTGCAGCTTCTACCAAGTGGACACCAAGCTTGAATGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223976.2 |
||
| CDS CAA 72 bp | GGGACACGCTGGGACTGTGCTCTGCTATATTCCCACTaGAACTTGGGGTCAAGGGTTCATGTCCTTCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GTRWDCALLYSH*NLGSRVHVLQN Trigger: ATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS TCA 72 bp | GGACACGCTGGGACTGTGCTCTGCTATATTCCCACTTaGACTTGGGGTCAAGGGTTCATGTCCTTCAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: GHAGTVLCYIPT*TWGQGFMSFRI Trigger: AATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS CAA 72 bp | CGCTGGGACTGTGCTCTGCTATATTCCCACTTGAACTaGGGGTCAAGGGTTCATGTCCTTCAGAATTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWDCALLYSHLN*GSRVHVLQNSP Trigger: TGGAGAATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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| CDS TCA 72 bp | AAGGGTTCATGTCCTTCAGAATTCTCCAGCATTTCCTaGATGAGAGGTGGCATTGATCCAGGAATTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: KGSCPSEFSSIS*MRGGIDPGISI Trigger: AATGGAAATTCCTGGATCAATGCCACCTCTCATTCAGGAAATGCTGGAGAATTCTGAAGGACATGAACCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063750.8 ENSMUST00000225921.2 |
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