Pregenerated sensors for RAPSN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002104Ensembl transcript IDs: ENSMUST00000050323.6, ENSMUST00000111445.10, ENSMUST00000111446.10
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTaGTGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: GGPGRYPRISPGPRA*WWRRSQGRLCGNPR Trigger: TCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCCAGGGCCTCGGGCTTaGTGGTGGAGAAGGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSKQASGPELAMEDLADTPGPRA*WWRRSQ Trigger: CTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGG...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACCAGGGGAGGTTGTGTaGAAACCCAAGATGGCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: SKQASGPELAMEDLADTLPGEVV*KPKMAA Trigger: AGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGACCAGGGGAGGTTGTGTaGAAACCCAAGATGGCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: EDLADTLEFHQGLGLDGGPGEVV*KPKMAA Trigger: AGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGG...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTAACCAGGGCCTCGGGCTaGATGGTGGAGAAGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKQASGPELAMEDLADTLTRASG*MVEKEP Trigger: TGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGT...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| 3UTR TCA 72 bp | GGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTaGTGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRYPRISPGPRA*WWRRSQGRLCG Trigger: TCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTAGCTGGGCACCAGCCCTaGTGCCAGGCAGGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLAGHQP*CQAGRG Trigger: GCCTCGGCCTGCCTGGCACCAGGGCTGGTGCCCAGC...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGAGGGCACCAGCCCTGGTaGCAGGCAGGCCGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDLADTLEFHQGLGLDGGGHQPW*QAGRGR Trigger: CCTGCCTCGGCCTGCCTGGCACCAGGGCTGGTGCCC...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAGAGCAGGGCAGGGCCTaGAGCCGGCTGTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVEEQGRA*SRLFLS Trigger: GGAGAGGAACAGCCGGCTGCAGGCCCTGCCCTGCTC...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGGGCACCAGCCCTaGTGCCAGGCAGGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAAGHQP*CQAGRG Trigger: GCCTCGGCCTGCCTGGCACCAGGGCTGGTGCCCAGC...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCTGCCCATGCTCAGGCTaGCCTGACCCCCAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKQASGPELAMEDLADTCPCSG*PDPQAG Trigger: CCCAGCTTGGGGGTCAGGTCAGCCTGAGCATGGGCA...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAGGGCACCAGCCCTGGTaGCAGGCAGGCCGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEGHQPW*QAGRGR Trigger: CCTGCCTCGGCCTGCCTGGCACCAGGGCTGGTGCCC...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGGAGCAGGGCAGGGCCTaGAGCCGGCTGTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKEQGRA*SRLFLS Trigger: GGAGAGGAACAGCCGGCTGCAGGCCCTGCCCTGCTC...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAGCTGGGCACCAGCCCTaGTGCCAGGCAGGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEAGHQP*CQAGRG Trigger: GCCTCGGCCTGCCTGGCACCAGGGCTGGTGCCCAGC...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCATGCTCAGGCTGACCTaGCCCCCAAGCTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKQASGPELAMEDLADTMLRLT*PPSWAP Trigger: TGGTGCCCAGCTTGGGGGTCAGGTCAGCCTGAGCAT...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTATGCCCATGCTCAGGCTaGCCTGACCCCCAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLCPCSG*PDPQAG Trigger: CCCAGCTTGGGGGTCAGGTCAGCCTGAGCATGGGCA...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAATGCCCATGCTCAGGCTaGCCTGACCCCCAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQCPCSG*PDPQAG Trigger: CCCAGCTTGGGGGTCAGGTCAGCCTGAGCATGGGCA...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCGGCCCATCTCCGAGTaGGCTGTTACCAAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKRPISE*AVTKQP Trigger: GGGCTGCTTGGTAACAGCTCACTCGGAGATGGGCCG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACGGCCCATCTCCGAGTaGGCTGTTACCAAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQRPISE*AVTKQP Trigger: GGGCTGCTTGGTAACAGCTCACTCGGAGATGGGCCG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACGGCCCATCTCCGAGTaGGCTGTTACCAAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLRPISE*AVTKQP Trigger: GGGCTGCTTGGTAACAGCTCACTCGGAGATGGGCCG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAATGCTCAGGCTGACCTaGCCCCCAAGCTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQMLRLT*PPSWAP Trigger: TGGTGCCCAGCTTGGGGGTCAGGTCAGCCTGAGCAT...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCCTGGGCGTAGAAACTaGCCAGGCTGCAGCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKQASGPELAMEDLADTPGRRN*PGCSRH Trigger: GTGTCTGCTGCAGCCTGGGCAGTTTCTACGCCCAGG...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGACACCCAGCAGCACGTaGACCTGCCCGAGGCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKTPSST*TCPRRF Trigger: AAACCGCCTCGGGCAGGTGCACGTGCTGCTGGGTGT...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAGAGCAGGGCAGGGCCTaGAGCCGGCTGTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEEQGRA*SRLFLS Trigger: GGAGAGGAACAGCCGGCTGCAGGCCCTGCCCTGCTC...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACAAAGCCCGGCTTCATaGAGGAGCGGCGGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQQSPAS*RSGGSW Trigger: CCAACTGCCGCCGCTCCTCCATGAAGCCGGGCTTTG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCAAAGCCCGGCTTCATaGAGGAGCGGCGGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKQSPAS*RSGGSW Trigger: CCAACTGCCGCCGCTCCTCCATGAAGCCGGGCTTTG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAAGAAACTGCCCAGGCTaGAGCAGACACGGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVERNCPG*SRHGTP Trigger: TGGAGTGCCGTGTCTGCTGCAGCCTGGGCAGTTTCT...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCCTGGGCGTAGAAACTaGCCAGGCTGCAGCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKPGRRN*PGCSRH Trigger: GTGTCTGCTGCAGCCTGGGCAGTTTCTACGCCCAGG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACCTGGGCGTAGAAACTaGCCAGGCTGCAGCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLPGRRN*PGCSRH Trigger: GTGTCTGCTGCAGCCTGGGCAGTTTCTACGCCCAGG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCAACACTCCATGGCACTaGCCAGGTGGCCCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGNTPWH*PGGPAG Trigger: GCCTGCTGGGCCACCTGGGCAGTGCCATGGAGTGTT...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGAAGCAGCACGTGCACCTaGCCGAGGCGGTTTCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: EDLADTLEFHQGLGLDGGSSTCT*PRRFPI Trigger: GATCGGAAACCGCCTCGGGCAGGTGCACGTGCTGCT...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAATGCAGGCATCTGAGATaGAAGATGTGGGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVECRHLR*KMWEQG Trigger: GCCCTGCTCCCACATCTTTCATCTCAGATGCCTGCA...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAATCAGGCAATGCAGCTTaGGCTGGCTCAGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQSGNAA*AGSAPG Trigger: ACCTGGAGCTGAGCCAGCTCAAGCTGCATTGCCTGA...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAAACACTCCATGGCACTaGCCAGGTGGCCCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAENTPWH*PGGPAG Trigger: GCCTGCTGGGCCACCTGGGCAGTGCCATGGAGTGTT...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAAGCAGCACGTGCACCTaGCCGAGGCGGTTTCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAESSTCT*PRRFPI Trigger: GATCGGAAACCGCCTCGGGCAGGTGCACGTGCTGCT...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAACACCCAGCAGCACGTaGACCTGCCCGAGGCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAETPSST*TCPRRF Trigger: AAACCGCCTCGGGCAGGTGCACGTGCTGCTGGGTGT...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCACGCTGCAGCCCTTTaGTGCGGTAGATGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKHAAAL*CGRCSH Trigger: GTGAGAGCATCTACCGCAGCAAAGGGCTGCAGCGTG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGTCCTCCACGCACTCGTaGAACCTCACTACGTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKSSTHS*NLTTCV Trigger: CACGCACGTAGTGAGGTTCCACGAGTGCGTGGAGGA...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAACAAAGCCCGGCTTCATaGAGGAGCGGCGGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEQSPAS*RSGGSW Trigger: CCAACTGCCGCCGCTCCTCCATGAAGCCGGGCTTTG...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCAATGCAGCTTGAGCTaGCTCAGCTCCAGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKQCSLS*LSSRSP Trigger: AGGGGACCTGGAGCTGAGCCAGCTCAAGCTGCATTG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111445.10 |
||
| CDS-3UTR TCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCCTTCTGGAAGAGGCTaGGGCCCAGGAAAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAPSGRG*GPGKHC Trigger: GCAATGCTTTCCTGGGCCTCAGCCTCTTCCAGAAGG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTATGCAGGCATCTGAGATaGAAGATGTGGGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLCRHLR*KMWEQG Trigger: GCCCTGCTCCCACATCTTTCATCTCAGATGCCTGCA...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCTTCATCCACACCTaGAGTGCCTTCTCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVETFIHT*SAFSVW Trigger: CCAGACAGAGAAGGCACTGCAGGTGTGGATGAAGGT...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAACACATAGCTTCTCATTaGTGCGCGCCAGGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVEHIASH*CAPGSG Trigger: ACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTG...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCAGAAACTGCCCAGGCTaGAGCAGACACGGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMARNCPG*SRHGTP Trigger: TGGAGTGCCGTGTCTGCTGCAGCCTGGGCAGTTTCT...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCAAGCTCTGCAGCCTTaGAGGGAAAGAACAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKQASGPELAMEDLADTQALQP*RERTGL Trigger: AAGCCCTGTTCTTTCCCTGCAAGGCTGCAGAGCTTG...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACTCTCACTCAGGCAATaGAGCTTGAGCTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQLSLRQ*SLSWLS Trigger: GCTGAGCCAGCTCAAGCTGCATTGCCTGAGTGAGAG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCTCTCACTCAGGCAATaGAGCTTGAGCTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKLSLRQ*SLSWLS Trigger: GCTGAGCCAGCTCAAGCTGCATTGCCTGAGTGAGAG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCACGCTGCAGCCCTTTaGTGCGGTAGATGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAHAAAL*CGRCSH Trigger: GTGAGAGCATCTACCGCAGCAAAGGGCTGCAGCGTG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACACGGCACTCCAGCATaGTGTCATCGTTGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLHGTPA*CHRCCG Trigger: CCCACAACAACGATGACACCATGCTGGAGTGCCGTG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACACGGCACTCCAGCATaGTGTCATCGTTGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQHGTPA*CHRCCG Trigger: CCCACAACAACGATGACACCATGCTGGAGTGCCGTG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAACCTTCTGGAAGAGGCTaGGGCCCAGGAAAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEPSGRG*GPGKHC Trigger: GCAATGCTTTCCTGGGCCTCAGCCTCTTCCAGAAGG...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACTTTGCCATAGTCGTTaGCAAGCTCTGCAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQLCHSR*QALQPC Trigger: GCAAGGCTGCAGAGCTTGTCAACGACTATGGCAAAG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACTTTGCCATAGTCGTTaGCAAGCTCTGCAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLLCHSR*QALQPC Trigger: GCAAGGCTGCAGAGCTTGTCAACGACTATGGCAAAG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAATCATGGCCCGATATTTaGGGCTCCAGCCTTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQSWPDI*GSSLCH Trigger: ATGGCAAAGGCTGGAGCCTCAAATATCGGGCCATGA...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAATCAGGCAATGCAGCTTaGGCTGGCTCAGCTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQSGNAA*AGSAYC Trigger: GCAATAAGCTGAGCCAGCTCAAGCTGCATTGCCTGA...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGATGCAGGCATCTGAGATaGAAGATGTGGGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDLADTLEFHQGLGLDGGCRHLR*KMWEQG Trigger: GCCCTGCTCCCACATCTTTCATCTCAGATGCCTGCA...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATAGCTTCTCATTGCTaGGCGCCAGGTTCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKIASHC*APGSGS Trigger: GCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTAT...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACACATAGCTTCTCATTaGTGCGCGCCAGGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQHIASH*CAPGSG Trigger: ACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCACATAGCTTCTCATTaGTGCGCGCCAGGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKHIASH*CAPGSG Trigger: ACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAAGAAACTGCCCAGGCTaGAGCAGACACGGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAERNCPG*SRHGTP Trigger: TGGAGTGCCGTGTCTGCTGCAGCCTGGGCAGTTTCT...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACAAGCTCTGCAGCCTTaGAGGGAAAGAACAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLQALQP*RERTGL Trigger: AAGCCCTGTTCTTTCCCTGCAAGGCTGCAGAGCTTG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCGCTGCAGCCCTTTGCTaGGGTAGATGCTCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGAAALC*GRCSHS Trigger: TGAGTGAGAGCATCTACCGCAGCAAAGGGCTGCAGC...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAACCTTCTCTGTCTGGTTaGACTGGTACAGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQPSLSG*TGTAAV Trigger: GACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGG...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCACGGCACTCCAGCATaGTGTCATCGTTGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAHGTPA*CHRCCG Trigger: CCCACAACAACGATGACACCATGCTGGAGTGCCGTG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACAGCCATGTGGTACTaGCTCATGGCCCGATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVETAMWY*LMARYL Trigger: CAAATATCGGGCCATGAGCCAGTACCACATGGCTGT...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAACAATGCAGCTTGAGCTaGCTCAGCTTATTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVEQCSLS*LSLLPT Trigger: GGTTGGCAATAAGCTGAGCCAGCTCAAGCTGCATTG...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAATCCTCCACGCACTCGTaGAACCTCACTACGTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAESSTHS*NLTTCV Trigger: CACGCACGTAGTGAGGTTCCACGAGTGCGTGGAGGA...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGATCAGGCAATGCAGCTTaGGCTGGCTCAGCTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDLADTLEFHQGLGLDGGSGNAA*AGSAYC Trigger: GCAATAAGCTGAGCCAGCTCAAGCTGCATTGCCTGA...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAATGTTTTGCAGGCATCTaGGATGAAAGATGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVECFAGI*DERCGS Trigger: GCTCCCACATCTTTCATCTCAGATGCCTGCAAAACA...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAACCTTTTTCAATCTGTTaGTTTGTCTGGTCCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLGLDGGEGARGGCVEPFSIC*FVWSCP Trigger: GGGGCAGGACCAGACAAAGCAACAGATTGAAAAAGG...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCCTTTTTCAATCTGTTaGTTTGTCTGGTCCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKQASGPELAMEDLADTPFSIC*FVWSCP Trigger: GGGGCAGGACCAGACAAAGCAACAGATTGAAAAAGG...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCACCTTCATCCACACCTaGAGTGCCTTCTCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGTFIHT*SAFSVW Trigger: CCAGACAGAGAAGGCACTGCAGGTGTGGATGAAGGT...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGAATAGCTTCTCATTGCTaGGCGCCAGGTTCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDLADTLEFHQGLGLDGGIASHC*APGSGS Trigger: GCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTAT...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCATAGCTTCTCATTGCTaGGCGCCAGGTTCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGIASHC*APGSGS Trigger: GCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTAT...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGTCGTTGACAAGCTCTaGAGCCTTGCAGGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQVVDKL*SLAGKE Trigger: TTCTTTCCCTGCAAGGCTGCAGAGCTTGTCAACGAC...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAACTCTCACTCAGGCAATaGAGCTTGAGCTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAELSLRQ*SLSWLS Trigger: GCTGAGCCAGCTCAAGCTGCATTGCCTGAGTGAGAG...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTACTTTGCTGCGGTAGATaGTCTCACTCAGGCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLLCCGR*SHSGNA Trigger: TGCATTGCCTGAGTGAGAGCATCTACCGCAGCAAAG...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAGCTGCAGCCCTTTGCTaGGGTAGATGCTCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEAAALC*GRCSHS Trigger: TGAGTGAGAGCATCTACCGCAGCAAAGGGCTGCAGC...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCCTTCTCTGTCTGGTTaGACTGGTACAGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAPSLSG*TGTAAV Trigger: GACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCAGTGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMASAFSV*LDWYSC Trigger: GCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACT...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCAGTGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGSAFSV*LDWYSC Trigger: GCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACT...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGGCAGGGCAATCTTCATaGACTCCTCACAACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKAGQSS*TPHNTP Trigger: TGGAGTGTTGTGAGGAGTCCATGAAGATTGCCCTGC...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCAGGGCAATCTTCATaGACTCCTCACAACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGLDGGEGARGGCVETQAGQSS*TPHNTP Trigger: TGGAGTGTTGTGAGGAGTCCATGAAGATTGCCCTGC...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCCTGGGCTTTCTCAATaGCATCCAAAGCCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKQASGPELAMEDLADTPGLSQ*HPKPCL Trigger: AAGACAAGGCTTTGGATGCCATTGAGAAAGCCCAGG...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAATCATGGCCCGATATTTaGGGCTCCAGCCTTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAESWPDI*GSSLCH Trigger: ATGGCAAAGGCTGGAGCCTCAAATATCGGGCCATGA...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGCCTTTTTCAATCTGTTaGTTTGTCTGGTCCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKPFSIC*FVWSCP Trigger: GGGGCAGGACCAGACAAAGCAACAGATTGAAAAAGG...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGTCGTTGACAAGCTCTaGAGCCTTGCAGGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAVVDKL*SLAGKE Trigger: TTCTTTCCCTGCAAGGCTGCAGAGCTTGTCAACGAC...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCTTTGCTGCGGTAGATaGTCTCACTCAGGCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGLCCGR*SHSGNA Trigger: TGCATTGCCTGAGTGAGAGCATCTACCGCAGCAAAG...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCTTTGCTGCGGTAGATaGTCTCACTCAGGCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMALCCGR*SHSGNA Trigger: TGCATTGCCTGAGTGAGAGCATCTACCGCAGCAAAG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTATCTGTCTGGTTGGACTaGTACAGCTGCAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLSVWLD*YSCSPF Trigger: AAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGA...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCACAGCCATGTGGTACTaGCTCATGGCCCGATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMATAMWY*LMARYL Trigger: CAAATATCGGGCCATGAGCCAGTACCACATGGCTGT...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGTCTTCAGCTAAGTCCTaGGCTTTCTCAATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKSSAKS*AFSMAS Trigger: GGATGCCATTGAGAAAGCCCAGGACTTAGCTGAAGA...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTATCTTCAGCTAAGTCCTaGGCTTTCTCAATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLSSAKS*AFSMAS Trigger: GGATGCCATTGAGAAAGCCCAGGACTTAGCTGAAGA...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCTGTTTTGCAGGCATCTaGGATGAAAGATGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMACFAGI*DERCGS Trigger: GCTCCCACATCTTTCATCTCAGATGCCTGCAAAACA...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCTCTGTCTGGTTGGACTaGTACAGCTGCAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLDGGEGARGGCVETQDGSVWLD*YSCSPF Trigger: AAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGA...GCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GAGGACCTGGCCGATACCCTAGAATTTCACCAGGGCCTCGGGCTTGATGGTGGACCTGGGCTTTCTCAATaGCATCCAAAGCCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDLADTLEFHQGLGLDGGPGLSQ*HPKPCL Trigger: AAGACAAGGCTTTGGATGCCATTGAGAAAGCCCAGG...TCCACCATCAAGCCCGAGGCCCTGGTGAAATTCTAGGGTATCGGCCAGGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAACAATGCAGCTTGAGCTaGCTCAGCTTATTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEQCSLS*LSLLPT Trigger: GGTTGGCAATAAGCTGAGCCAGCTCAAGCTGCATTG...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAATGTTTTGCAGGCATCTaGGATGAAAGATGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAECFAGI*DERCGS Trigger: GCTCCCACATCTTTCATCTCAGATGCCTGCAAAACA...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAATCTGTCTGGTTGGACTaGTACAGCTGCAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVEKEPGEVVWKPKMAAESVWLD*YSCSPF Trigger: AAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGA...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTATCTTGCAGTAGGAGATaGTTTTGTGGAACTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: SKQASGPELAMEDLADTLSCSRR*FCGTHI Trigger: TATGTGAGTTCCACAAAACCATCTCCTACTGCAAGA...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCTCTTGCAGTAGGAGATaGTTTTGTGGAACTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: GLMVEKEPGEVVWKPKMASCSRR*FCGTHI Trigger: TATGTGAGTTCCACAAAACCATCTCCTACTGCAAGA...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 90 bp | TGTGGGAGCAGGGCAGGGCCTGCAGCCGGCTGTTCCTCTCCCCGATaGACTCACCACAGAGGCCGCAGTAGAGCTCAGTCTCCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: CGSRAGPAAGCSSPR*THHRGRSRAQSPPR Trigger: GCGTGGAGGAGACTGAGCTCTACTGCGGCCTCTGTGGTGAGTCCATCGGGGAGAGGAACAGCCGGCTGCAGGCCCTGCCCTGCTCCCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAGAGGAGCGGCGGCAGTaGGGGCAGCTCCTAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HQGLGLDGGEGARGGCVEEERRQ*GQLLVP Trigger: TGGCACTAGGAGCTGCCCCAACTGCCGCCGCTCCTC...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGGAGGAGCGGCGGCAGTaGGGGCAGCTCCTAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKEERRQ*GQLLVP Trigger: TGGCACTAGGAGCTGCCCCAACTGCCGCCGCTCCTC...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 90 bp | TGGCATCCAAAGCCTTGTCTTGCACCTTCCGGGCCATCCAGCACTTaGCCACACCCAGCAGCACGTGCACCTGCCCGAGGCGGTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WHPKPCLAPSGPSST*PHPAARAPARGGFR Trigger: TCGGAAACCGCCTCGGGCAGGTGCACGTGCTGCTGGGTGTGGCCAAGTGCTGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGATGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCGGGCCATCCAGCACTaGGCCACACCCAGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GLMVEKEPGEVVWKPKMARAIQH*ATPSST Trigger: CGTGCTGCTGGGTGTGGCCAAGTGCTGGATGGCCCG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGAGGAGCGGCGGCAGTaGGGGCAGCTCCTAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAEERRQ*GQLLVP Trigger: TGGCACTAGGAGCTGCCCCAACTGCCGCCGCTCCTC...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAACGGGCCATCCAGCACTaGGCCACACCCAGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: MVEKEPGEVVWKPKMAAERAIQH*ATPSST Trigger: CGTGCTGCTGGGTGTGGCCAAGTGCTGGATGGCCCG...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS GCA 90 bp | AGAGCTCAGTCTCCTCCACGCACTCGTGGAACCTCACTACGTGCGTaGGCAGCTCACGCTGCAGCCCTTTGCTGCGGTAGATGCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAQSPPRTRGTSLRA*AAHAAALCCGRCSH Trigger: GTGAGAGCATCTACCGCAGCAAAGGGCTGCAGCGTGAGCTGCGCACGCACGTAGTGAGGTTCCACGAGTGCGTGGAGGAGACTGAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS GCA 90 bp | CGGCCCACGAGGTCAGAGCCCTTCTCCAGCACCTTCATCCACACCTaGAGTGCCTTCTCTGTCTGGTTGGACTGGTACAGCTGCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPTRSEPFSSTFIHT*SAFSVWLDWYSCSP Trigger: AGGACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACTGCAGGTGTGGATGAAGGTGCTGGAGAAGGGCTCTGACCTCGTGGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 90 bp | GGGCGTAGAAACTGCCCAGGCTGCAGCAGACACGGCACTCCAGCATaGTGTCATCGTTGTTGTGGGCATAGCGCAGGGCCTTCTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRNCPGCSRHGTPA*CHRCCGHSAGPSQS Trigger: GCTTTGAGAAGGCCCTGCGCTATGCCCACAACAACGATGACACCATGCTGGAGTGCCGTGTCTGCTGCAGCCTGGGCAGTTTCTACGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAATCACATAGCTTCTCATaGCTGCGCGCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HQGLGLDGGEGARGGCVESHSFS*LRARFR Trigger: CCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGA...TTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS TCA 90 bp | CAGTTGGGGCAGCTCCTAGTGCCATTGTTTTGCAGGCATCTGAGATaGAAGATGTGGGAGCAGGGCAGGGCCTGCAGCCGGCTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLGQLLVPLFCRHLR*KMWEQGRACSRLFL Trigger: GAGGAACAGCCGGCTGCAGGCCCTGCCCTGCTCCCACATCTTTCATCTCAGATGCCTGCAAAACAATGGCACTAGGAGCTGCCCCAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 90 bp | CAGCCCTGGTGCCAGGCAGGCCGAGGCAGGTCTTGCAGTAGGAGATaGTTTTGTGGAACTCACATAGCTTCTCATTGCTGCGCGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPWCQAGRGRSCSRR*FCGTHIASHCCAPG Trigger: ACCTGGCGCGCAGCAATGAGAAGCTATGTGAGTTCCACAAAACCATCTCCTACTGCAAGACCTGCCTCGGCCTGCCTGGCACCAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGGCCTTCTCTGTCTGGTaGGACTGGTACAGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKAFSVW*DWYSCS Trigger: ACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGC...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTATCACATAGCTTCTCATaGCTGCGCGCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKQASGPELAMEDLADTLSHSFS*LRARFR Trigger: CCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGA...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGTCACATAGCTTCTCATaGCTGCGCGCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKSHSFS*LRARFR Trigger: CCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGA...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAATCCAAAGCCTTGTCTaGCACCTTCCGGGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGLDGGEGARGGCVETQIQSLV*HLPGHP Trigger: TGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGAT...TTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS GCA 90 bp | TCAGCTAAGTCCTGGGCTTTCTCAATGGCATCCAAAGCCTTGTCTTaGACCTTCCGGGCCATCCAGCACTTGGCCACACCCAGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SAKSWAFSMASKALS*TFRAIQHLATPSST Trigger: CGTGCTGCTGGGTGTGGCCAAGTGCTGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGATGCCATTGAGAAAGCCCAGGACTTAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCCTCATGGCCCGATATTaGAGGCTCCAGCCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLMVEKEPGEVVWKPKMALMARY*RLQPLP Trigger: TGGCAAAGGCTGGAGCCTCAAATATCGGGCCATGAG...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR CAA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCATCCAAAGCCTTGTCTaGCACCTTCCGGGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLMVEKEPGEVVWKPKMAIQSLV*HLPGHP Trigger: TGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGAT...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCTCCTTTTTCAATCTGTaGCTTTGTCTGGTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKQASGPELAMEDLADTSFFNL*LCLVLP Trigger: GGGCAGGACCAGACAAAGCAACAGATTGAAAAAGGA...GGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAGCCTTCTCTGTCTGGTaGGACTGGTACAGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MVEKEPGEVVWKPKMAAEAFSVW*DWYSCS Trigger: ACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGC...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAACTCATGGCCCGATATTaGAGGCTCCAGCCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MVEKEPGEVVWKPKMAAELMARY*RLQPLP Trigger: TGGCAAAGGCTGGAGCCTCAAATATCGGGCCATGAG...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCAGGCCTCTGGCCCTGAGTTGGCTATGGAGGACCTGGCCGATACCCTAAGCTGGCTCAGCTTATaGCCAACCTCTTCAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKQASGPELAMEDLADTLSWLSL*PTSSAK Trigger: CTTAGCTGAAGAGGTTGGCAATAAGCTGAGCCAGCT...TAGGGTATCGGCCAGGTCCTCCATAGCCAACTCAGGGCCAGAGGCCTGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS TCA 90 bp | GCAGCCCTTTGCTGCGGTAGATGCTCTCACTCAGGCAATGCAGCTTaGGCTGGCTCAGCTTATTGCCAACCTCTTCAGCTAAGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AALCCGRCSHSGNAA*AGSAYCQPLQLSPG Trigger: CCCAGGACTTAGCTGAAGAGGTTGGCAATAAGCTGAGCCAGCTCAAGCTGCATTGCCTGAGTGAGAGCATCTACCGCAGCAAAGGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GCCTCGGGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGTCCTTTTTCAATCTGTaGCTTTGTCTGGTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGLMVEKEPGEVVWKPKSFFNL*LCLVLP Trigger: GGGCAGGACCAGACAAAGCAACAGATTGAAAAAGGA...CTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCCCGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | GGCTTGATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCTCCTTTTTCAATCTGTaGCTTTGTCTGGTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLMVEKEPGEVVWKPKMASFFNL*LCLVLP Trigger: GGGCAGGACCAGACAAAGCAACAGATTGAAAAAGGA...GGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCATCAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTGGAGAAGGAGCCAGGGGAGGTTGTGTGGAAACCCAAGATGGCCGCTGAAAGCTGGCTCAGCTTATaGCCAACCTCTTCAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: MVEKEPGEVVWKPKMAAESWLSL*PTSSAK Trigger: CTTAGCTGAAGAGGTTGGCAATAAGCTGAGCCAGCT...TTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTGGCTCCTTCTCCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS GCA 90 bp | TGCAGTAGGAGATGGTTTTGTGGAACTCACATAGCTTCTCATTGCTaGGCGCCAGGTTCAGGTAGCTTTCGAGCAGGAAGTCAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSRRWFCGTHIASHC*APGSGSFRAGSQHP Trigger: AGGATGCTGACTTCCTGCTCGAAAGCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGAGTTCCACAAAACCATCTCCTACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS GCA 90 bp | CCGATATTTGAGGCTCCAGCCTTTGCCATAGTCGTTGACAAGCTCTaGAGCCTTGCAGGGAAAGAACAGGGCTTTCTCATAGTCCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PIFEAPAFAIVVDKL*SLAGKEQGFLIVLD Trigger: GTCAAGGACTATGAGAAAGCCCTGTTCTTTCCCTGCAAGGCTGCAGAGCTTGTCAACGACTATGGCAAAGGCTGGAGCCTCAAATATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS CCA 90 bp | AGCACCTTCATCCACACCTGCAGTGCCTTCTCTGTCTGGTTGGACTaGTACAGCTGCAGTCCTTTTTCAATCTGTTGCTTTGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: STFIHTCSAFSVWLD*YSCSPFSICCFVWS Trigger: GGACCAGACAAAGCAACAGATTGAAAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACTGCAGGTGTGGATGAAGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS GCA 90 bp | TCTTGCAGTAGGAGATGGTTTTGTGGAACTCACATAGCTTCTCATTaGTGCGCGCCAGGTTCAGGTAGCTTTCGAGCAGGAAGTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SCSRRWFCGTHIASH*CAPGSGSFRAGSQH Trigger: ATGCTGACTTCCTGCTCGAAAGCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGAGTTCCACAAAACCATCTCCTACTGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 90 bp | TCTCCAGCACCTTCATCCACACCTGCAGTGCCTTCTCTGTCTGGTTaGACTGGTACAGCTGCAGTCCTTTTTCAATCTGTTGCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAPSSTPAVPSLSG*TGTAAVLFQSVALS Trigger: AGACAAAGCAACAGATTGAAAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACTGCAGGTGTGGATGAAGGTGCTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 72 bp | AGGGCAGGGCCTGCAGCCGGCTGTTCCTCTCCCCGATaGACTCACCACAGAGGCCGCAGTAGAGCTCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGPAAGCSSPR*THHRGRSRAQS Trigger: AGACTGAGCTCTACTGCGGCCTCTGTGGTGAGTCCATCGGGGAGAGGAACAGCCGGCTGCAGGCCCTGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS GCA 72 bp | TCAGTCTCCTCCACGCACTCGTGGAACCTCACTACGTaGGTGCGCAGCTCACGCTGCAGCCCTTTGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSSTHSWNLTT*VRSSRCSPLLR Trigger: CCGCAGCAAAGGGCTGCAGCGTGAGCTGCGCACGCACGTAGTGAGGTTCCACGAGTGCGTGGAGGAGACTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CAA 72 bp | AAAGCCTTGTCTTGCACCTTCCGGGCCATCCAGCACTaGGCCACACCCAGCAGCACGTGCACCTGCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KALSCTFRAIQH*ATPSSTCTCPR Trigger: CCTCGGGCAGGTGCACGTGCTGCTGGGTGTGGCCAAGTGCTGGATGGCCCGGAAGGTGCAAGACAAGGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS CAA 90 bp | ATGGCATCCAAAGCCTTGTCTTGCACCTTCCGGGCCATCCAGCACTaGGCCACACCCAGCAGCACGTGCACCTGCCCGAGGCGGTTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: MASKALSCTFRAIQH*ATPSSTCTCPRRFP Trigger: CGGAAACCGCCTCGGGCAGGTGCACGTGCTGCTGGGTGTGGCCAAGTGCTGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGATGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS GCA 72 bp | TCTCCTCCACGCACTCGTGGAACCTCACTACGTGCGTaGGCAGCTCACGCTGCAGCCCTTTGCTGCGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPPRTRGTSLRA*AAHAAALCCGR Trigger: TCTACCGCAGCAAAGGGCTGCAGCGTGAGCTGCGCACGCACGTAGTGAGGTTCCACGAGTGCGTGGAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS TCA 72 bp | TGCTGCGGTAGATGCTCTCACTCAGGCAATGCAGCTTaGGCTGGCTCAGCTCCAGGTCCCCTCGGCTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: CCGRCSHSGNAA*AGSAPGPLGSD Trigger: ATCGGAGCCGAGGGGACCTGGAGCTGAGCCAGCTCAAGCTGCATTGCCTGAGTGAGAGCATCTACCGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111445.10 |
||
| CDS CCA 72 bp | AACTGCCCAGGCTGCAGCAGACACGGCACTCCAGCATaGTGTCATCGTTGTTGTGGGCATAGCGCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NCPGCSRHGTPA*CHRCCGHSAGP Trigger: AGGCCCTGCGCTATGCCCACAACAACGATGACACCATGCTGGAGTGCCGTGTCTGCTGCAGCCTGGGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 72 bp | GTAGCGGGCGGTCACCGTGCTGCAGGGCAATCTTCATaGACTCCTCACAACACTCCATGGCACTGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VAGGHRAAGQSS*TPHNTPWHCPG Trigger: ACCTGGGCAGTGCCATGGAGTGTTGTGAGGAGTCCATGAAGATTGCCCTGCAGCACGGTGACCGCCCGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS CCA 72 bp | CGAGGGAAGGCTGTCTCCAGGTCCCCTCGGCTCCGATaGATATCGGCAAAGCAGAGCAGACAGAGTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGKAVSRSPRLR*ISAKQSRQSAC Trigger: ACAGGCACTCTGTCTGCTCTGCTTTGCCGATATCCATCGGAGCCGAGGGGACCTGGAGACAGCCTTCCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS GCA 72 bp | AGCAGACAGAGTGCCTGTAGCGGGCGGTCACCGTGCTaGAGGGCAATCTTCATGGACTCCTCACAACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRQSACSGRSPC*RAIFMDSSQHS Trigger: GGAGTGTTGTGAGGAGTCCATGAAGATTGCCCTGCAGCACGGTGACCGCCCGCTACAGGCACTCTGTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS GCA 72 bp | CAGAGCAGACAGAGTGCCTGTAGCGGGCGGTCACCGTaGTGCAGGGCAATCTTCATGGACTCCTCACAACAC | + |
|
Preference number: 6 (lower is better) Translates to: QSRQSACSGRSP*CRAIFMDSSQH Trigger: GTGTTGTGAGGAGTCCATGAAGATTGCCCTGCAGCACGGTGACCGCCCGCTACAGGCACTCTGTCTGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 |
||
| CDS GCA 72 bp | TCACTACGTGCGTGCGCAGCTCACGCTGCAGCCCTTTaGTGCGGTAGATGCTCTCACTCAGGCAATGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLRACAAHAAAL*CGRCSHSGNAA Trigger: AGCTGCATTGCCTGAGTGAGAGCATCTACCGCAGCAAAGGGCTGCAGCGTGAGCTGCGCACGCACGTAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CAA 90 bp | ACCTCTTCAGCTAAGTCCTGGGCTTTCTCAATGGCATCCAAAGCCTaGTCTTGCACCTTCCGGGCCATCCAGCACTTGGCCACACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSAKSWAFSMASKA*SCTFRAIQHLATPS Trigger: GCTGGGTGTGGCCAAGTGCTGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGATGCCATTGAGAAAGCCCAGGACTTAGCTGAAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS CAA 72 bp | GCTAAGTCCTGGGCTTTCTCAATGGCATCCAAAGCCTaGTCTTGCACCTTCCGGGCCATCCAGCACTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AKSWAFSMASKA*SCTFRAIQHLA Trigger: GGCCAAGTGCTGGATGGCCCGGAAGGTGCAAGACAAGGCTTTGGATGCCATTGAGAAAGCCCAGGACTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS CCA 72 bp | TGCCAGGCAGGCCGAGGCAGGTCTTGCAGTAGGAGATaGTTTTGTGGAACTCACATAGCTTCTCATTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CQAGRGRSCSRR*FCGTHIASHCC Trigger: GCAGCAATGAGAAGCTATGTGAGTTCCACAAAACCATCTCCTACTGCAAGACCTGCCTCGGCCTGCCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS TCA 72 bp | TGCTGCGGTAGATGCTCTCACTCAGGCAATGCAGCTTaGGCTGGCTCAGCTTATTGCCAACCTCTTCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: CCGRCSHSGNAA*AGSAYCQPLQL Trigger: TAGCTGAAGAGGTTGGCAATAAGCTGAGCCAGCTCAAGCTGCATTGCCTGAGTGAGAGCATCTACCGCAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050323.6 ENSMUST00000111446.10 |
||
| CDS GCA 72 bp | AGGAGATGGTTTTGTGGAACTCACATAGCTTCTCATTaGTGCGCGCCAGGTTCAGGTAGCTTTCGAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRWFCGTHIASH*CAPGSGSFRAG Trigger: TCCTGCTCGAAAGCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGAGTTCCACAAAACCATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CAA 90 bp | TTCTCCAGCACCTTCATCCACACCTGCAGTGCCTTCTCTGTCTGGTaGGACTGGTACAGCTGCAGTCCTTTTTCAATCTGTTGCTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSTFIHTCSAFSVW*DWYSCSPFSICCFV Trigger: GACAAAGCAACAGATTGAAAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACTGCAGGTGTGGATGAAGGTGCTGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS GCA 72 bp | TGCAGTGCCTTCTCTGTCTGGTTGGACTGGTACAGCTaGAGTCCTTTTTCAATCTGTTGCTTTGTCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSAFSVWLDWYS*SPFSICCFVWS Trigger: GGACCAGACAAAGCAACAGATTGAAAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS GCA 72 bp | AGATGGTTTTGTGGAACTCACATAGCTTCTCATTGCTaGGCGCCAGGTTCAGGTAGCTTTCGAGCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RWFCGTHIASHC*APGSGSFRAGS Trigger: ACTTCCTGCTCGAAAGCTACCTGAACCTGGCGCGCAGCAATGAGAAGCTATGTGAGTTCCACAAAACCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||
| CDS CCA 72 bp | ATCCACACCTGCAGTGCCTTCTCTGTCTGGTTGGACTaGTACAGCTGCAGTCCTTTTTCAATCTGTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IHTCSAFSVWLD*YSCSPFSICCF Trigger: AAAGCAACAGATTGAAAAAGGACTGCAGCTGTACCAGTCCAACCAGACAGAGAAGGCACTGCAGGTGTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050323.6 ENSMUST00000111445.10 ENSMUST00000111446.10 |
||