Pregenerated sensors for RAPGEFL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038020Ensembl transcript IDs: ENSMUST00000107479.3
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTGCCACCTCTTCAGTAGGGCCAGGAAGGAGGGTGCGAGGCTGTaGCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCC | + |
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Preference number: 1 (lower is better) Translates to: HCHLFSRARKEGARL*QETSPSSCREPLQP Trigger: GGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCTTCCTGGCCCTACTGAAGAGGTGGCAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 90 bp | AAACGCCTCCAGGGAGAAGGTGGCCGATGTCTGTTGAGGGCATCGTaGAAAAGTGCTTGGGTGCCAGGTGCCAAGGACCGAGGCGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: KRLQGEGGRCLLRAS*KSAWVPGAKDRGGG Trigger: GCCCCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCACCTTCTCCCTGGAGGCGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 90 bp | GCAGAGAGGTCTGGGGAACAGGTACCCCCTAGCTCCGGATACCACTaGGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCCAGAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: AERSGEQVPPSSGYH*VPPSIRQRQGPRGS Trigger: GCTGCCTCTGGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTATCCGGAGCTAGGGGGTACCTGTTCCCCAGACCTCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 90 bp | CTTGAGCTGCCTGCAGCAGACAGACCAGGGTTAGGGGAGCAGGCCTaGCCCATCGAGCCCTGTAACTTGGACTTTGTGCTAGGCCTGCGC | + |
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Preference number: 1 (lower is better) Translates to: LELPAADRPGLGEQA*PIEPCNLDFVLGLR Trigger: GCGCAGGCCTAGCACAAAGTCCAAGTTACAGGGCTCGATGGGGCAGGCCTGCTCCCCTAACCCTGGTCTGTCTGCTGCAGGCAGCTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 90 bp | AGAAACCCCATCTCTGGAACAGACCTCCCTTGGAGAGCAGAGAGGTaGTCCTCCGTCCCTTGCCCAGAGAGGCCAGCCACCAGGAGCGTA | + |
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Preference number: 1 (lower is better) Translates to: RNPISGTDLPWRAER*SSVPCPERPATRSV Trigger: TACGCTCCTGGTGGCTGGCCTCTCTGGGCAAGGGACGGAGGAGCACCTCTCTGCTCTCCAAGGGAGGTCTGTTCCAGAGATGGGGTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 90 bp | AGGGGGTTGCTGAAGGGCTGCAGAAGAGGGACAGGATGTCTGGGCTaGCGGGGCACAGCTAGCATTGCAGGGAAGCAGCAGAATTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: RGLLKGCRRGTGCLG*RGTASIAGKQQNLG Trigger: TCCCAAATTCTGCTGCTTCCCTGCAATGCTAGCTGTGCCCCGGCAGCCCAGACATCCTGTCCCTCTTCTGCAGCCCTTCAGCAACCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR TCA 90 bp | CTTGTGATAGGAAACGCCTCCAGGGAGAAGGTGGCCGATGTCTGTTaGGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTGCCAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: LVIGNASREKVADVC*GHRAKVLGCQVPRT Trigger: GGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCACCTTCTCCCTGGAGGCGTTTCCTATCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 90 bp | CGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCTaGAACCCCTTAGTAGTGGAGGAAGTGACAGGAGAGGTAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: RGCARKPHPVAAGSP*NPLVVEEVTGEVIK Trigger: CTTTATTACCTCTCCTGTCACTTCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR TCA 90 bp | AAAAGCTGGGCAGAAACACCATCAAAACAGGAAACTAAAGCTGGGTaGATGAGAGAGGGCCACTTTCTGATGTCAAGGTCAAGGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: KSWAETPSKQETKAG*MREGHFLMSRSREA Trigger: AGCCTCCCTTGACCTTGACATCAGAAAGTGGCCCTCTCTCATTCACCCAGCTTTAGTTTCCTGTTTTGATGGTGTTTCTGCCCAGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR TCA 90 bp | TTTAGTCAGCCATCTCATGGACCCCTACATTCTAGATATTTGTCTTaGAAAGCTGGGCAGAAACACCATCAAAACAGGAAACTAAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: FSQPSHGPLHSRYLS*KAGQKHHQNRKLKL Trigger: CAGCTTTAGTTTCCTGTTTTGATGGTGTTTCTGCCCAGCTTTTCAAGACAAATATCTAGAATGTAGGGGTCCATGAGATGGCTGACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGGTGCGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCCCTCCAGGAACAGGTTaGCCCACAGTCTTGCTATGT | + |
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Preference number: 2 (lower is better) Translates to: RRVRGCARKPHPVAAGSPPPGTG*PTVLLC Trigger: ACATAGCAAGACTGTGGGCCAACCTGTTCCTGGAGG...GGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CAA 90 bp | TGGAACAGACCTCCCTTGGAGAGCAGAGAGGTGCTCCTCCGTCCCTaGCCCAGAGAGGCCAGCCACCAGGAGCGTAGCTTGTGTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WNRPPLESREVLLRP*PREASHQERSLCVK Trigger: CTTCACACACAAGCTACGCTCCTGGTGGCTGGCCTCTCTGGGCAAGGGACGGAGGAGCACCTCTCTGCTCTCCAAGGGAGGTCTGTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CAA 90 bp | GCAGAAGAGGGACAGGATGTCTGGGCTGCCGGGGCACAGCTAGCATaGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCAC | + |
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Preference number: 2 (lower is better) Translates to: AEEGQDVWAAGAQLA*QGSSRIWERNGHHH Trigger: GTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGCTGTGCCCCGGCAGCCCAGACATCCTGTCCCTCTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | TACCACTGCGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCCAGAGGCAGCTTATCGTGCAAAAGTGCTTaGGTGCCAGGTGCCAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: YHCVPPSIRQRQGPRGSLSCKSA*VPGAKD Trigger: GTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGA...TAAGCTGCCTCTGGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR TCA 90 bp | TACCACTGCGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCCAGAGGCAGCTTAAGCGTAGCTTGTGTGTaGAGGAGCAAGGTAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: YHCVPPSIRQRQGPRGSLSVACV*RSKVRG Trigger: TCCTCTTACCTTGCTCCTTCACACACAAGCTACGCT...TAAGCTGCCTCTGGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGGAAGCTAACAACTCCCTCCTTAGCAGTGAGAAACCCCTCAAAGCAGAGTGCTCCTCCGTCCCTTaGCCAGAGAGGCCAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: QKEANNSLLSSEKPLKAECSSVP*PERPAT Trigger: GGTGGCTGGCCTCTCTGGGCAAGGGACGGAGGAGCA...CTCTGCTTTGAGGGGTTTCTCACTGCTAAGGAGGGAGTTGTTAGCTTCCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | GAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGACAGACAGACAGACAATaGTTGGTGGCAGACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: ETSPSSCREPLQPLSSGGQTDRQ*LVADTE Trigger: TTCTGTGTCTGCCACCAACCATTGTCTGTCTGTCTG...TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR TCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATCTCCCAGAGCAGGGCTaGTTTCACAGCTGTCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: ALQGSSRIWERNGHHHHYLPEQG*FHSCPG Trigger: GCCGGGACAGCTGTGAAATCAGCCCTGCTCTGGGAG...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAACCCCAGTCCTTCCCCAGCTTCAGAGAAAGAACGGAGAACATAAGGAAACTAGAGGGGGTTGCTaGAGGGCTGCAGAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSTPVLPQLQRKNGEHKETRGGC*RAAEEG Trigger: TCCCTCTTCTGCAGCCCTTCAGCAACCCCCTCTAGT...TTCCTTATGTTCTCCGTTCTTTCTCTGAAGCTGGGGAAGGACTGGGGTTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATGACAGCAGGTGGGGTTaGGCAGGGAGTGACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ALQGSSRIWERNGHHHHYDSRWG*AGSDWR Trigger: TCTCCAGTCACTCCCTGCCCAACCCCACCTGCTGTC...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | AACCCCTTAGTAGTGGAGGAAGTGACAGGAGAGGTAATAAAGGCCCTGTCAAAGGGAACAGACCTCCCTTaGAGAGCAGAGAGGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: NPLVVEEVTGEVIKALSKGTDLP*RAERCS Trigger: GGAGCACCTCTCTGCTCTCCAAGGGAGGTCTGTTCC...CTTTGACAGGGCCTTTATTACCTCTCCTGTCACTTCCTCCACTACTAAGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATGGCCAAGGGGTGGCATaGTCACCATCACCACTATGG | + |
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Preference number: 2 (lower is better) Translates to: ALQGSSRIWERNGHHHHYGQGVA*SPSPLW Trigger: CCATAGTGGTGATGGTGACCATGCCACCCCTTGGCC...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | AACCCCTTAGTAGTGGAGGAAGTGACAGGAGAGGTAATAAAGGCCCTGTCAAAGTGGGCAGGGAGTGACTaGAGACATAGCCAACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: NPLVVEEVTGEVIKALSKWAGSD*RHSQQG Trigger: CCCTTGTTGGCTATGTCTCCAGTCACTCCCTGCCCA...CTTTGACAGGGCCTTTATTACCTCTCCTGTCACTTCCTCCACTACTAAGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGACACTCTCCCTACATTATCAGATGCACTCCTGCATCCTAAAAGGGGACATGGCATCGTGCAAAAGTaGTTGGGTGCCAGGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: CDTLPTLSDALLHPKRGHGIVQK*LGARCQ Trigger: TTGGCACCTGGCACCCAAGCACTTTTGCACGATGCC...ATGTCCCCTTTTAGGATGCAGGAGTGCATCTGATAATGTAGGGAGAGTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGATGTCAAGGTCAAGGGAGGCTCAGACAAGTTAAGAACTCACAGGAGGCTAGGGACAAATGTCTCCTaGGTTCCAGACACTAGACAC | + |
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Preference number: 2 (lower is better) Translates to: SDVKVKGGSDKLRTHRRLGTNVS*VPDTRH Trigger: GTGTCTAGTGTCTGGAACGCAGGAGACATTTGTCCC...TAGCCTCCTGTGAGTTCTTAACTTGTCTGAGCCTCCCTTGACCTTGACATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CCA 90 bp | TTATCAGATGCACTCCTGCATCCTAAAAGGGGACATGTACATTGTACATCACACAGGACCTCAGCAGGATaGCAGGCTTATGGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LSDALLHPKRGHVHCTSHRTSAG*QAYGPG Trigger: ACCAGGACCATAAGCCTGCCATCCTGCTGAGGTCCT...GTGTGATGTACAATGTACATGTCCCCTTTTAGGATGCAGGAGTGCATCTGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR TCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATTCTTCGAAACGATTGTaGCACTCTCCCTACATTATC | + |
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Preference number: 2 (lower is better) Translates to: ALQGSSRIWERNGHHHHYSSKRL*HSPYII Trigger: GATAATGTAGGGAGAGTGTCACAATCGTTTCGAAGA...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | GTTGAGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTaGCAAGGACCGAGGCGGGGGCAGCCAGGCCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: VEGIVQKCLGAR*QGPRRGQPGPL Trigger: GAGAGGGCCTGGCTGCCCCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR TCA 72 bp | CGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGCTGTaGTCCGGGAGCGGGTGCTTCCTTCCTGCATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: REGGFQCLPSQL*SGSGCFLPAWE Trigger: CTCCCATGCAGGAAGGAAGCACCCGCTCCCGGATCACAGCTGTGATGGGAGGCACTGGAAGCCGCCTTCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | CTCTTCAGTAGGGCCAGGAAGGAGGGTGCGAGGCTGTaGCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: LFSRARKEGARL*QETSPSSCREP Trigger: GGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCTTCCTGGCCCTACTGAAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CCA 72 bp | GGCCGATGTCTGTTGAGGGCATCGTGCAAAAGTGCTTaGGTGCCAGGTGCCAAGGACCGAGGCGGGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GRCLLRASCKSA*VPGAKDRGGGS Trigger: GCTGCCCCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | AGGTGGCCGATGTCTGTTGAGGGCATCGTGCAAAAGTaGTTGGGTGCCAGGTGCCAAGGACCGAGGCGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RWPMSVEGIVQK*LGARCQGPRRG Trigger: CCCCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | GGTGCGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTaGCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: GARLCQETSPSS*REPLQPLSSGG Trigger: TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | TCTGGGGAACAGGTACCCCCTAGCTCCGGATACCACTaGGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SGEQVPPSSGYH*VPPSIRQRQGP Trigger: GGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTATCCGGAGCTAGGGGGTACCTGTTCCCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CAA 90 bp | GGGACCAGTGAAACAGTTGCCCGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGTGGAACAGACCTCCCTaGGAGAGCAGAGAGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GTSETVAREGGFQCLPSQWNRPP*ESREVL Trigger: GAGCACCTCTCTGCTCTCCAAGGGAGGTCTGTTCCA...CTGTGATGGGAGGCACTGGAAGCCGCCTTCGCGGGCAACTGTTTCACTGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | ACGTCCTGCCTCCAGGAACAGGTTGGCCCACAGTCTTaGTATGTAGGACAGCAGGTGGGGTTGGGCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TSCLQEQVGPQS*YVGQQVGLGRE Trigger: CTCCCTGCCCAACCCCACCTGCTGTCCTACATAGCAAGACTGTGGGCCAACCTGTTCCTGGAGGCAGGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | GCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCTaGAACCCCTTAGTAGTGGAGGAAGTGACAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ARKPHPVAAGSP*NPLVVEEVTGE Trigger: CTCTCCTGTCACTTCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR TCA 72 bp | GGAAACGCCTCCAGGGAGAAGGTGGCCGATGTCTGTTaGGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GNASREKVADVC*GHRAKVLGCQV Trigger: CACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCACCTTCTCCCTGGAGGCGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR TCA 72 bp | CCAGAGAGGCCAGCCACCAGGAGCGTAGCTTGTGTGTaGAGGAGCAAGGTAAGAGGACCTCAGCAGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: PERPATRSVACV*RSKVRGPQQDG Trigger: GCCATCCTGCTGAGGTCCTCTTACCTTGCTCCTTCACACACAAGCTACGCTCCTGGTGGCTGGCCTCTCTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | CCTGCAGCAGACAGACCAGGGTTAGGGGAGCAGGCCTaGCCCATCGAGCCCTGTAACTTGGACTTTGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PAADRPGLGEQA*PIEPCNLDFVL Trigger: TAGCACAAAGTCCAAGTTACAGGGCTCGATGGGGCAGGCCTGCTCCCCTAACCCTGGTCTGTCTGCTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CCA 72 bp | ATGGGCCAAGGGGTGGCATGGTCACCATCACCACTATaGGCCAGGGAGGTCGTATGGCATGTCTGTGGACAT | + |
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Preference number: 3 (lower is better) Translates to: MGQGVAWSPSPL*AREVVWHVCGH Trigger: ATGTCCACAGACATGCCATACGACCTCCCTGGCCCATAGTGGTGATGGTGACCATGCCACCCCTTGGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CCA 72 bp | GAGGAATGGTCACCATCACCATTATGGGCCAAGGGGTaGCATGGTCACCATCACCACTATGGGCCAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: EEWSPSPLWAKG*HGHHHHYGPGR Trigger: CCTCCCTGGCCCATAGTGGTGATGGTGACCATGCCACCCCTTGGCCCATAATGGTGATGGTGACCATTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CCA 72 bp | ATGGTCACCATCACCATTATGGGCCAAGGGGTGGCATaGTCACCATCACCACTATGGGCCAGGGAGGTCGTA | + |
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Preference number: 3 (lower is better) Translates to: MVTITIMGQGVA*SPSPLWAREVV Trigger: TACGACCTCCCTGGCCCATAGTGGTGATGGTGACCATGCCACCCCTTGGCCCATAATGGTGATGGTGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGGGCAGGGAGTGACTGGAGACATAGCCAACAAGGGTAGCACCAAACGGAAGATCGTGCAAAAGTGCTaGGGTGCCAGGTGCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: VGQGVTGDIANKGSTKRKIVQKC*GARCQG Trigger: TCCTTGGCACCTGGCACCCAAGCACTTTTGCACGAT...CTTCCGTTTGGTGCTACCCTTGTTGGCTATGTCTCCAGTCACTCCCTGCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR CCA 72 bp | TGTGTGAAGGAGCAAGGTAAGAGGACCTCAGCAGGATaGCAGGCTTATGGTCCTGGTAGGCCAACCCAACTC | + |
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Preference number: 3 (lower is better) Translates to: CVKEQGKRTSAG*QAYGPGRPTQL Trigger: GAGTTGGGTTGGCCTACCAGGACCATAAGCCTGCCATCCTGCTGAGGTCCTCTTACCTTGCTCCTTCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | GTGCAGGCTACCATGAGAGTTAATACAGGCTCAGTATaGCTCCAACTTGGGAGGACTGGTAGCTGCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VQATMRVNTGSV*LQLGRTGSCWA Trigger: AGCCCAGCAGCTACCAGTCCTCCCAAGTTGGAGGCATACTGAGCCTGTATTAACTCTCATGGTAGCCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTCAACCCCAGTCCTTCCCCAGCTTCAGAGAAAGAACGGAGAACATAAGGAAGCCTCCAGGAACAGGTaGGCCCACAGTCTTGCTATG | + |
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Preference number: 3 (lower is better) Translates to: LSTPVLPQLQRKNGEHKEASRNR*AHSLAM Trigger: CATAGCAAGACTGTGGGCCAACCTGTTCCTGGAGGC...TTCCTTATGTTCTCCGTTCTTTCTCTGAAGCTGGGGAAGGACTGGGGTTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR GCA 72 bp | TGTAACTTGGACTTTGTGCTAGGCCTGCGCAGCCTCTaGTTCAGACCCTGCAGGGTTAGAAGTGTGATCACA | + |
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Preference number: 3 (lower is better) Translates to: CNLDFVLGLRSL*FRPCRVRSVIT Trigger: TGTGATCACACTTCTAACCCTGCAGGGTCTGAAGCAGAGGCTGCGCAGGCCTAGCACAAAGTCCAAGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| 3UTR-3UTR CAA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATGGTGGCCGATGTCTGTaGAGGGCATCGTGCAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ALQGSSRIWERNGHHHHYGGRCL*RASCKS Trigger: ACTTTTGCACGATGCCCTCAACAGACATCGGCCACC...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| 3UTR CCA 72 bp | ACCACTATGGGCCAGGGAGGTCGTATGGCATGTCTGTaGACATTTTGCCAGGAACTGCTGTATAAAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TTMGQGGRMACL*TFCQELLYKRD Trigger: GTCCCTTTTATACAGCAGTTCCTGGCAAAATGTCCACAGACATGCCATACGACCTCCCTGGCCCATAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| 3UTR TCA 72 bp | CCATCTCATGGACCCCTACATTCTAGATATTTGTCTTaGAAAGCTGGGCAGAAACACCATCAAAACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSHGPLHSRYLS*KAGQKHHQNRK Trigger: TTTCCTGTTTTGATGGTGTTTCTGCCCAGCTTTTCAAGACAAATATCTAGAATGTAGGGGTCCATGAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | GGGACCAGTGAAACAGTTGCCCGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGGGGGGCCCAGGGTGGTaGAGCCAGGGGTTCGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSETVAREGGFQCLPSQGGPGW*SQGFAG Trigger: CCCGGCGAACCCCTGGCTTCACCACCCTGGGCCCCC...CTGTGATGGGAGGCACTGGAAGCCGCCTTCGCGGGCAACTGTTTCACTGGTCCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGTGCGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCTCTCCTGGGGAGACCTaGACCTCCTCCGGAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCARKPHPVAAGSPSPGET*TSSGRG Trigger: ACCCCTTCCGGAGGAGGTCCAGGTCTCCCCAGGAGA...GGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GGGACCAGTGAAACAGTTGCCCGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGAGGCGCTGCTGTCCCTaGTGGTCCCTCCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTSETVAREGGFQCLPSQRRCCP*WSLQPG Trigger: GCCTGGCTGGAGGGACCACCAGGGACAGCAGCGCCT...CTGTGATGGGAGGCACTGGAAGCCGCCTTCGCGGGCAACTGTTTCACTGGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | GGGACCAGTGAAACAGTTGCCCGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGACCCGGTTCAGAAGATaGTCTGGCCGCTCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTSETVAREGGFQCLPSQTRFRR*SGRSGA Trigger: CGCCCCCGAGCGGCCAGAGCATCTTCTGAACCGGGT...CTGTGATGGGAGGCACTGGAAGCCGCCTTCGCGGGCAACTGTTTCACTGGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGTGCGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCGGTCTGCAGGTGATGTaGGGATGCCTCCATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCARKPHPVAAGSPGLQVM*GCLHVQ Trigger: CTGGACATGGAGGCATCCCCACATCACCTGCAGACC...GGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| 3UTR CAA 72 bp | TGGCCGATGTCTGTTGAGGGCATCGTGCAAAAGTGCTaGGGTGCCAGGTGCCAAGGACCGAGGCGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WPMSVEGIVQKC*GARCQGPRRGQ Trigger: CTGCCCCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTGCCAAGGACCGAGGCGGGGGCGCACGTACGCCTTaGTCTGCAGGTGATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRASCKSAWVPGAKDRGGGARTP*SAGDVG Trigger: CCCCACATCACCTGCAGACCAAGGCGTACGTGCGCC...CCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | GAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGAGCTCGCCCCGCCAGCTaGGACGTCTGCTTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETSPSSCREPLQPLSSGGARPAS*DVCFFK Trigger: TTTGAAGAAGCAGACGTCTCAGCTGGCGGGGCGAGC...TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGTAAGAGGACCTCAGCAGGATGGCAGGCTTATGGTCCTGGTAGGCCAACAGCCCGGGCTCGGTTaGGGGCTCTCGGAGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVRGPQQDGRLMVLVGQQPGLG*GLSEES Trigger: GCTTTCCTCCGAGAGCCCCCAACCGAGCCCGGGCTG...TTGGCCTACCAGGACCATAAGCCTGCCATCCTGCTGAGGTCCTCTTACCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGTGCGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCGAGAGCTCAAAGAGGTaGTTCTGGTTGTCGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCARKPHPVAAGSPESSKR*FWLSMT Trigger: GGTCATCGACAACCAGAACCACCTCTTTGAGCTCTC...GGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | GTGAAACAGTTGCCCGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGCTGTGATAAGAGCGGCTTAACCTaGTTGCTGGGCGGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKQLPAKAASSASHHSCDKSGLT*LLGGWL Trigger: GAGCCAGCCGCCCAGCAAGCAGGTTAAGCCGCTCTT...ATCACAGCTGTGATGGGAGGCACTGGAAGCCGCCTTCGCGGGCAACTGTTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | TACCACTGCGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCCAGAGGCAGCTTATCAGGCTCCACCCGGTaGATCTCTGTGTCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YHCVPPSIRQRQGPRGSLSGSTR*ISVSPG Trigger: CCCAGGAGACACAGAGATCCACCGGGTGGAGCCTGA...TAAGCTGCCTCTGGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGATCGATGACCTGGAACTaGCGCACGTACGCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETSPSSCREPLQPLSSGGSMTWN*RTYALV Trigger: GACCAAGGCGTACGTGCGCCAGTTCCAGGTCATCGA...TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| 3UTR CAA 72 bp | CCCTTGCCCAGAGAGGCCAGCCACCAGGAGCGTAGCTaGTGTGTGAAGGAGCAAGGTAAGAGGACCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPREASHQERS*CVKEQGKRTSA Trigger: TGCTGAGGTCCTCTTACCTTGCTCCTTCACACACAAGCTACGCTCCTGGTGGCTGGCCTCTCTGGGCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| 3UTR CAA 72 bp | TACGTCCTGCCTCCAGGAACAGGTTGGCCCACAGTCTaGCTATGTAGGACAGCAGGTGGGGTTGGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YVLPPGTGWPTV*LCRTAGGVGQG Trigger: TCCCTGCCCAACCCCACCTGCTGTCCTACATAGCAAGACTGTGGGCCAACCTGTTCCTGGAGGCAGGACGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGTGCGAGGCTGTGCCAGGAAACCTCACCCAGTAGCTGCCGGGAGCCCCCACTTTCTCGGCCACTaGATGCAGCTTCTCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCARKPHPVAAGSPHFLGH*MQLLNI Trigger: AATATTGAGAAGCTGCATTCAGTGGCCGAGAAAGTG...GGGGCTCCCGGCAGCTACTGGGTGAGGTTTCCTGGCACAGCCTCGCACCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | GTGAAACAGTTGCCCGCGAAGGCGGCTTCCAGTGCCTCCCATCACAGCTGTGATATCGGAGCCCCTGAATaGCACTCGGGTCTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VKQLPAKAASSASHHSCDIGAPE*HSGLQT Trigger: TGTCTGCAGACCCGAGTGGCATTCAGGGGCTCCGAT...ATCACAGCTGTGATGGGAGGCACTGGAAGCCGCCTTCGCGGGCAACTGTTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTGCCAAGGACCGAGGCGGGAAGGACAGCAGGTCCTaGTTCTGCTTGCAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRASCKSAWVPGAKDRGGKDSRS*FCLQMA Trigger: AGCCATCTGCAAGCAGAACCAGGACCTGCTGTCCTT...CCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGAAGCTAACAACTCCCTCCTTAGCAGTGAGAAACCCCTCAAAGCAGAGAGGCGAGACACGCTCTaGCGCCGCTGCAGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QKEANNSLLSSEKPLKAERRDTL*RRCSGR Trigger: GCGGCCACTGCAGCGGCGTCAGAGCGTGTCTCGCCT...CTCTGCTTTGAGGGGTTTCTCACTGCTAAGGAGGGAGTTGTTAGCTTCCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | TACCACTGCGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCCAGAGGCAGCTTAGAGCCCAGAATGTCTTaGACTGATGCCGAGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YHCVPPSIRQRQGPRGSLEPRMS*TDAERR Trigger: TCGCCTCTCGGCATCAGTGCAAGACATTCTGGGCTC...TAAGCTGCCTCTGGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCAACCCCAGTCCTTCCCCAGCTTCAGAGAAAGAACGGAGAACATAAGGAACGCTGCTGTCCCTGGTaGTCCCTCCAGCCAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTPVLPQLQRKNGEHKERCCPW*SLQPGA Trigger: AGCGCCTGGCTGGAGGGACCACCAGGGACAGCAGCG...TTCCTTATGTTCTCCGTTCTTTCTCTGAAGCTGGGGAAGGACTGGGGTTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCGATGTCTGTTGAGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTGCCAAAACGCAGTCCTCCGTTaGCTGGAGGAGGACCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPMSVEGIVQKCLGARCQNAVLR*LEEDLL Trigger: GAGAAGGTCCTCCTCCAGCCAACGGAGGACTGCGTT...TTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| 3UTR CAA 72 bp | AGGAAACGCCTCCAGGGAGAAGGTGGCCGATGTCTGTaGAGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRLQGEGGRCL*RASCKSAWVPG Trigger: ACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAACAGACATCGGCCACCTTCTCCCTGGAGGCGTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | GCTAGCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATCAGTGGCCACCCAGTaGGTGACCTCGCTGCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: ASIAGKQQNLGEEWSPSPSVATQ*VTSLQR Trigger: GCGTTGCAGCGAGGTCACTCACTGGGTGGCCACTGA...TGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGTAAGAGGACCTCAGCAGGATGGCAGGCTTATGGTCCTGGTAGGCCAAGGAAGGTCAGGTCTTTaGGGATCAGGGGCACGAACG | + |
|
Preference number: 4 (lower is better) Translates to: SKVRGPQQDGRLMVLVGQGRSGL*GSGART Trigger: CGTTCGTGCCCCTGATCCTCAAAGACCTGACCTTCC...TTGGCCTACCAGGACCATAAGCCTGCCATCCTGCTGAGGTCCTCTTACCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCAGGGAGTGACTGGAGACATAGCCAACAAGGGTAGCACCAAACGGAAGACCTCGCTGCAACGCTaGAGCAGCAACTCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGQGVTGDIANKGSTKRKTSLQR*SSNSRL Trigger: CAACCTGGAGTTGCTGCTGCAGCGTTGCAGCGAGGT...CTTCCGTTTGGTGCTACCCTTGTTGGCTATGTCTCCAGTCACTCCCTGCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGTAAGAGGACCTCAGCAGGATGGCAGGCTTATGGTCCTGGTAGGCCAAGATCTCTGTGTCTCCTaGGGAGACCTGGACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVRGPQQDGRLMVLVGQDLCVS*GDLDLL Trigger: GAGGAGGTCCAGGTCTCCCCAGGAGACACAGAGATC...TTGGCCTACCAGGACCATAAGCCTGCCATCCTGCTGAGGTCCTCTTACCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATGTTCAGAAGATGCTCTaGCCGCTCGGGGGCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYVQKML*PLGGAQ Trigger: CTGGGCGCCCCCGAGCGGCCAGAGCATCTTCTGAAC...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | TACCACTGCGTCCCACCCAGTATAAGGCAGAGGCAGGGTCCCAGAGGCAGCTTAAGTTCCTTGATAATGTaGCCGGCCCCTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHCVPPSIRQRQGPRGSLSSLIM*PAPSSS Trigger: AGAGGAAGAAGGGGCCGGCCACATTATCAAGGAACT...TAAGCTGCCTCTGGGACCCTGCCTCTGCCTTATACTGGGTGGGACGCAGTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATTGGCCACCCAGTGAGTaGCCTCGCTGCAACGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYWPPSE*PRCNAA Trigger: TGCAGCGTTGCAGCGAGGTCACTCACTGGGTGGCCA...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | AGCCACCAGGAGCGTAGCTTGTGTGTGAAGGAGCAAGGTAAGAGGACCTCAGCACATTGTCCAGCCCCATaGCCACAGCATAGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SHQERSLCVKEQGKRTSAHCPAP*PQHRRT Trigger: TGTCCTTCTATGCTGTGGTCATGGGGCTGGACAATG...TGCTGAGGTCCTCTTACCTTGCTCCTTCACACACAAGCTACGCTCCTGGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | AGCCACCAGGAGCGTAGCTTGTGTGTGAAGGAGCAAGGTAAGAGGACCTCAGCAAATGCCACTCGGGTCTaGAGACAGGAATCTATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHQERSLCVKEQGKRTSANATRV*RQESIR Trigger: CCGGATAGATTCCTGTCTGCAGACCCGAGTGGCATT...TGCTGAGGTCCTCTTACCTTGCTCCTTCACACACAAGCTACGCTCCTGGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | GCTAGCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCAAGCAGGTCCTGGTTCTaGTTGCAGATGGCTGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: ASIAGKQQNLGEEWSPSPSRSWF*LQMAAI Trigger: GATCGCAGCCATCTGCAAGCAGAACCAGGACCTGCT...TGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATCTCTCGGAGGAAAGCTaGGAGCAGCAGGCGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYLSEES*EQQARH Trigger: GTGTCTCGCCTGCTGCTCCCAGCTTTCCTCCGAGAG...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCAACCCCAGTCCTTCCCCAGCTTCAGAGAAAGAACGGAGAACATAAGGAATGGTTGTCGATGACCTaGAACTGGCGCACGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTPVLPQLQRKNGEHKEWLSMT*NWRTYA Trigger: GGCGTACGTGCGCCAGTTCCAGGTCATCGACAACCA...TTCCTTATGTTCTCCGTTCTTTCTCTGAAGCTGGGGAAGGACTGGGGTTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | TGTGACACTCTCCCTACATTATCAGATGCACTCCTGCATCCTAAAAGGGGACATAGAGCAAGGCAGGCTTaGTTCCGACCCAGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDTLPTLSDALLHPKRGHRARQA*FRPSPS Trigger: AGAGGGGCTGGGTCGGAAGCAAGCCTGCCTTGCTCT...ATGTCCCCTTTTAGGATGCAGGAGTGCATCTGATAATGTAGGGAGAGTGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATCAGGTGATGTGGGGATaGCTCCATGTCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYQVMWG*LHVQAE Trigger: CTCTGCCTGGACATGGAGGCATCCCCACATCACCTG...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGTAAGAGGACCTCAGCAGGATGGCAGGCTTATGGTCCTGGTAGGCCAAGGCAGGAAGAGGGAATaGGTAAGAACAATGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKVRGPQQDGRLMVLVGQGRKRE*VRTMSS Trigger: TGACGACATTGTTCTTACCCATTCCCTCTTCCTGCC...TTGGCCTACCAGGACCATAAGCCTGCCATCCTGCTGAGGTCCTCTTACCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GCTAGCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATGCTTGCTGGGCGGCTaGCTCTCTTCTGGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASIAGKQQNLGEEWSPSPCLLGG*LSSGIF Trigger: AAAGATTCCAGAAGAGAGCCAGCCGCCCAGCAAGCA...TGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATACTGTCTCCACCAGCTaGTGTAGCCTCAGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYTVSTS*CSLSVS Trigger: GGACACACTGAGGCTACACCAGCTGGTGGAGACAGT...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCAACCCCAGTCCTTCCCCAGCTTCAGAGAAAGAACGGAGAACATAAGGAAAGAGGCGACTGCGTATaGTCACGTAAGAGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTPVLPQLQRKNGEHKERGDCV*SRKSGQ Trigger: CTGACCACTCTTACGTGACCATACGCAGTCGCCTCT...TTCCTTATGTTCTCCGTTCTTTCTCTGAAGCTGGGGAAGGACTGGGGTTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | TGTGACACTCTCCCTACATTATCAGATGCACTCCTGCATCCTAAAAGGGGACATCAGTCCTCCGTTGGCTaGAGGAGGACCTTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CDTLPTLSDALLHPKRGHQSSVG*RRTFSP Trigger: TGGAGAGAAGGTCCTCCTCCAGCCAACGGAGGACTG...ATGTCCCCTTTTAGGATGCAGGAGTGCATCTGATAATGTAGGGAGAGTGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | TTATCAGATGCACTCCTGCATCCTAAAAGGGGACATGTACATTGTACATCACACGCCTTGGTCTGCAGGTaGTGTGGGGATGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSDALLHPKRGHVHCTSHALVCR*CGDASM Trigger: CATGGAGGCATCCCCACATCACCTGCAGACCAAGGC...GTGTGATGTACAATGTACATGTCCCCTTTTAGGATGCAGGAGTGCATCTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATGTACAGGCAAATAGGTaGCTGTTGATACCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYVQANR*LLIPSV Trigger: CACGCTGGGTATCAACAGCCACCTATTTGCCTGTAC...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATACCCTCCACATTCCTTaGCTGAACAAAGTACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYTLHIP*LNKVLV Trigger: CACCAGTACTTTGTTCAGTCAAGGAATGTGGAGGGT...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGAAGCTAACAACTCCCTCCTTAGCAGTGAGAAACCCCTCAAAGCAGAGTACGGAACAGGTTCTTaGATTTCCCTGGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKEANNSLLSSEKPLKAEYGTGS*ISLAAS Trigger: AGAAGCTGCCAGGGAAATTCAAGAACCTGTTCCGTA...CTCTGCTTTGAGGGGTTTCTCACTGCTAAGGAGGGAGTTGTTAGCTTCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CCA 90 bp | GCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATTATTCAAAGAGGTGGTTCTaGTTGTCGATGACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSSRIWERNGHHHHYSKRWF*LSMTWN Trigger: GTTCCAGGTCATCGACAACCAGAACCACCTCTTTGA...ATAATGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGAAGCTAACAACTCCCTCCTTAGCAGTGAGAAACCCCTCAAAGCAGAGCTGCTTGCAGATGGCTaGGATCTTGATGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKEANNSLLSSEKPLKAELLADG*DLDELL Trigger: AAGAAGTTCATCAAGATCGCAGCCATCTGCAAGCAG...CTCTGCTTTGAGGGGTTTCTCACTGCTAAGGAGGGAGTTGTTAGCTTCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 90 bp | GGGGGCTCTCGGAGGAAAGCTGGGAGCAGCAGGCGAGACACGCTCTaGCGCCGCTGCAGTGGCCGCAGTCCCCCGGCCGGACCGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSRRKAGSSRRDTL*RRCSGRSPPAGPPP Trigger: GGGCGGCGGTCCGGCCGGGGGACTGCGGCCACTGCAGCGGCGTCAGAGCGTGTCTCGCCTGCTGCTCCCAGCTTTCCTCCGAGAGCCCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 90 bp | GGGCGGCTCCAGCCCGGGCTCGGTTGGGGGCTCTCGGAGGAAAGCTaGGAGCAGCAGGCGAGACACGCTCTGACGCCGCTGCAGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLQPGLGWGLSEES*EQQARHALTPLQWP Trigger: CGGCCACTGCAGCGGCGTCAGAGCGTGTCTCGCCTGCTGCTCCCAGCTTTCCTCCGAGAGCCCCCAACCGAGCCCGGGCTGGAGCCGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 90 bp | CTCTCCCCCTTCCTCCTCAACGGGCGGCTCCAGCCCGGGCTCGGTTaGGGGCTCTCGGAGGAAAGCTGGGAGCAGCAGGCGAGACACGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPFLLNGRLQPGLG*GLSEESWEQQARHA Trigger: AGCGTGTCTCGCCTGCTGCTCCCAGCTTTCCTCCGAGAGCCCCCAACCGAGCCCGGGCTGGAGCCGCCCGTTGAGGAGGAAGGGGGAGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 90 bp | TTGTCGATGACCTGGAACTGGCGCACGTACGCCTTGGTCTGCAGGTaGTGTGGGGATGCCTCCATGTCCAGGCAGAGGGGCCGGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSMTWNWRTYALVCR*CGDASMSRQRGRLR Trigger: CCGGAGCCGGCCCCTCTGCCTGGACATGGAGGCATCCCCACATCACCTGCAGACCAAGGCGTACGTGCGCCAGTTCCAGGTCATCGACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | GAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGAGAGAGCAAGGCAGGCTaGCTTCCGACCCAGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETSPSSCREPLQPLSSGGESKAG*LPTQPL Trigger: GAGGGGCTGGGTCGGAAGCAAGCCTGCCTTGCTCTC...TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 90 bp | GATGACCTGGAACTGGCGCACGTACGCCTTGGTCTGCAGGTGATGTaGGGATGCCTCCATGTCCAGGCAGAGGGGCCGGCTCCGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: DDLELAHVRLGLQVM*GCLHVQAEGPAPVF Trigger: AAATACCGGAGCCGGCCCCTCTGCCTGGACATGGAGGCATCCCCACATCACCTGCAGACCAAGGCGTACGTGCGCCAGTTCCAGGTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCACCAGCCCGGGCTCGGTaGGGGGCTCTCGGAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASIAGKQQNLGEEWSPSPPARAR*GALGGK Trigger: CTTTCCTCCGAGAGCCCCCAACCGAGCCCGGGCTGG...TGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGCATCGTGCAAAAGTGCTTGGGTGCCAGGTGCCAAGGACCGAGGCGGGAGGAAGGTCAGGTCTTaGAGGATCAGGGGCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRASCKSAWVPGAKDRGGRKVRS*RIRGTN Trigger: GTTCGTGCCCCTGATCCTCAAAGACCTGACCTTCCT...CCCGCCTCGGTCCTTGGCACCTGGCACCCAAGCACTTTTGCACGATGCCCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 90 bp | ACAAGGATGAGGGCATCCTCGCGCTCCGCAGGCTCCTCCGAGTACTaGAGCTTCTCTGTCACAGAGCCCAGAATGTCTTGCACTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRMRASSRSAGSSEY*SFSVTEPRMSCTDA Trigger: GGCATCAGTGCAAGACATTCTGGGCTCTGTGACAGAGAAGCTGCAGTACTCGGAGGAGCCTGCGGAGCGCGAGGATGCCCTCATCCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | GAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGAAGGTCCTGGTTCTGCTaGCAGATGGCTGCGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ETSPSSCREPLQPLSSGGRSWFC*QMAAIL Trigger: CAAGATCGCAGCCATCTGCAAGCAGAACCAGGACCT...TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 90 bp | ACTCGGCAGAAAATCTCATCGGAGCCCCTGAATGCCACTCGGGTCTaGAGACAGGAATCTATCCGGCGGAAGTGTCGGAAGAGCGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TRQKISSEPLNATRV*RQESIRRKCRKSGL Trigger: TAAGCCGCTCTTCCGACACTTCCGCCGGATAGATTCCTGTCTGCAGACCCGAGTGGCATTCAGGGGCTCCGATGAGATTTTCTGCCGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 90 bp | GTCAGGCATGTAGACTCGGCAGAAAATCTCATCGGAGCCCCTGAATaGCACTCGGGTCTGCAGACAGGAATCTATCCGGCGGAAGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRHVDSAENLIGAPE*HSGLQTGIYPAEVS Trigger: CGACACTTCCGCCGGATAGATTCCTGTCTGCAGACCCGAGTGGCATTCAGGGGCTCCGATGAGATTTTCTGCCGAGTCTACATGCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 90 bp | GAACAATGTCGTCAAGAAGAATATCTGAGGCGCTGCTGTCCCTGGTaGTCCCTCCAGCCAGGCGCTCCAGAACCCGGTTCAGAAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQCRQEEYLRRCCPW*SLQPGAPEPGSEDA Trigger: AGCATCTTCTGAACCGGGTTCTGGAGCGCCTGGCTGGAGGGACCACCAGGGACAGCAGCGCCTCAGATATTCTTCTTGACGACATTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 90 bp | CGAGTACTGCAGCTTCTCTGTCACAGAGCCCAGAATGTCTTGCACTaGTGCCGAGAGGCGACTGCGTATGGTCACGTAAGAGTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVLQLLCHRAQNVLH*CREATAYGHVRVVR Trigger: CCTGACCACTCTTACGTGACCATACGCAGTCGCCTCTCGGCATCAGTGCAAGACATTCTGGGCTCTGTGACAGAGAAGCTGCAGTACTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 90 bp | AACTCGTGCACACATCGGAAGAGCTCCCAGTGGAAAGCAGTCAGGTaGTTGGCCACATCTTCAGGCTCCACCCGGTGGATCTCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSCTHRKSSQWKAVR*LATSSGSTRWISVS Trigger: AGACACAGAGATCCACCGGGTGGAGCCTGAAGATGTGGCCAATCACCTGACTGCTTTCCACTGGGAGCTCTTCCGATGTGTGCACGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 90 bp | AGACAGGAATCTATCCGGCGGAAGTGTCGGAAGAGCGGCTTAACCTaGTTGCTGGGCGGCTGGCTCTCTTCTGGAATCTTTAGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RQESIRRKCRKSGLT*LLGGWLSSGIFSST Trigger: AGTGGAGCTAAAGATTCCAGAAGAGAGCCAGCCGCCCAGCAAGCAGGTTAAGCCGCTCTTCCGACACTTCCGCCGGATAGATTCCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 90 bp | CTGTCACAGAGCCCAGAATGTCTTGCACTGATGCCGAGAGGCGACTaGGTATGGTCACGTAAGAGTGGTCAGGCATGTAGACTCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSQSPECLALMPRGD*VWSRKSGQACRLGR Trigger: TCTGCCGAGTCTACATGCCTGACCACTCTTACGTGACCATACGCAGTCGCCTCTCGGCATCAGTGCAAGACATTCTGGGCTCTGTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 90 bp | TGGCTGTTGATACCCAGCGTGGTGAAAACGCAGTCCTCCGTTGGCTaGAGGAGGACCTTCTCTCCAGAGGAAGCAACAGCTACAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WLLIPSVVKTQSSVG*RRTFSPEEATATRM Trigger: CATCCTTGTAGCTGTTGCTTCCTCTGGAGAGAAGGTCCTCCTCCAGCCAACGGAGGACTGCGTTTTCACCACGCTGGGTATCAACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTCAAGGTCAAGGGAGGCTCAGACAAGTTAAGAACTCACAGGAGGCTAAGCAGCTGTACACGCTaGCCCGGGGCCTCACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDVKVKGGSDKLRTHRRLSSCTR*PGASQS Trigger: GCTCTGTGAGGCCCCGGGCAAGCGTGTACAGCTGCT...TAGCCTCCTGTGAGTTCTTAACTTGTCTGAGCCTCCCTTGACCTTGACATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | GAAACCTCACCCAGTAGCTGCCGGGAGCCCCTGCAACCCCTTAGTAGTGGAGGATTACGGAACAGGTTCTaGAATTTCCCTGGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETSPSSCREPLQPLSSGGLRNRF*NFPGSF Trigger: GAAGCTGCCAGGGAAATTCAAGAACCTGTTCCGTAA...TCCTCCACTACTAAGGGGTTGCAGGGGCTCCCGGCAGCTACTGGGTGAGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCTTAGTAGTGGAGGAAGTGACAGGAGAGGTAATAAAGGCCCTGTCAAAGCGGCTGACAGCCGCATaGTCCAGCCCCATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: NPLVVEEVTGEVIKALSKRLTAA*SSPMTT Trigger: TGTGGTCATGGGGCTGGACAATGCGGCTGTCAGCCG...CTTTGACAGGGCCTTTATTACCTCTCCTGTCACTTCCTCCACTACTAAGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 90 bp | CAGAGCCCAGAATGTCTTGCACTGATGCCGAGAGGCGACTGCGTATaGTCACGTAAGAGTGGTCAGGCATGTAGACTCGGCAGAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPECLALMPRGDCV*SRKSGQACRLGRKS Trigger: AGATTTTCTGCCGAGTCTACATGCCTGACCACTCTTACGTGACCATACGCAGTCGCCTCTCGGCATCAGTGCAAGACATTCTGGGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 90 bp | GGGCCGGCTCCGGTATTTTCGGATTGTCCTCACTTTCTCGGCCACTaGATGCAGCTTCTCAATATTCACCAGACCATCTACGAGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPAPVFSDCPHFLGH*MQLLNIHQTIYEGL Trigger: AAGACCCTCGTAGATGGTCTGGTGAATATTGAGAAGCTGCATTCAGTGGCCGAGAAAGTGAGGACAATCCGAAAATACCGGAGCCGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCAAAGAGGTGGTTCTGGTaGTCGATGACCTGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASIAGKQQNLGEEWSPSPKRWFW*SMTWNW Trigger: CCAGTTCCAGGTCATCGACAACCAGAACCACCTCTT...TGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 90 bp | CGGCTCCGGTATTTTCGGATTGTCCTCACTTTCTCGGCCACTGAATaGAGCTTCTCAATATTCACCAGACCATCTACGAGGGTCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLRYFRIVLTFSATE*SFSIFTRPSTRVLL Trigger: GAGCAAGACCCTCGTAGATGGTCTGGTGAATATTGAGAAGCTGCATTCAGTGGCCGAGAAAGTGAGGACAATCCGAAAATACCGGAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCTCTCTTCTCCCCAGGTAATGAGGAGCTATCTGCCCTAGGTACTGAGACCCTCTTGCAGAAGTCCTaGGTAGGTATCCAGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLFSPGNEELSALGTETLLQKS*VGIQEM Trigger: CATTTCCTGGATACCTACCAAGGACTTCTGCAAGAG...GGTCTCAGTACCTAGGGCAGATAGCTCCTCATTACCTGGGGAGAAGAGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGCATTGCAGGGAAGCAGCAGAATTTGGGAGAGGAATGGTCACCATCACCATCCGGTATTTTCGGATaGTCCTCACTTTCTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASIAGKQQNLGEEWSPSPSGIFG*SSLSRP Trigger: TGGCCGAGAAAGTGAGGACAATCCGAAAATACCGGA...TGGTGATGGTGACCATTCCTCTCCCAAATTCTGCTGCTTCCCTGCAATGCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCTTAGTAGTGGAGGAAGTGACAGGAGAGGTAATAAAGGCCCTGTCAAAGAGTAGATACAGTTCCTaGATAATGTGGCCGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NPLVVEEVTGEVIKALSKSRYSS*IMWPAP Trigger: AGGGGCCGGCCACATTATCAAGGAACTGTATCTACT...CTTTGACAGGGCCTTTATTACCTCTCCTGTCACTTCCTCCACTACTAAGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | TTATCAGATGCACTCCTGCATCCTAAAAGGGGACATGTACATTGTACATCACACGGCCCCTTCTTCCTCTaGCAGAAGTCCTTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSDALLHPKRGHVHCTSHGPFFL*QKSLVG Trigger: ACCTACCAAGGACTTCTGCAAGAGGAAGAAGGGGCC...GTGTGATGTACAATGTACATGTCCCCTTTTAGGATGCAGGAGTGCATCTGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCTTAGTAGTGGAGGAAGTGACAGGAGAGGTAATAAAGGCCCTGTCAAAGCAGATGGCTGCGATCTaGATGAACTTCTTAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NPLVVEEVTGEVIKALSKQMAAI*MNFLSS Trigger: GCTGCTTAAGAAGTTCATCAAGATCGCAGCCATCTG...CTTTGACAGGGCCTTTATTACCTCTCCTGTCACTTCCTCCACTACTAAGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 72 bp | CGGAGGAAAGCTGGGAGCAGCAGGCGAGACACGCTCTaGCGCCGCTGCAGTGGCCGCAGTCCCCCGGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRKAGSSRRDTL*RRCSGRSPPAG Trigger: TCCGGCCGGGGGACTGCGGCCACTGCAGCGGCGTCAGAGCGTGTCTCGCCTGCTGCTCCCAGCTTTCCTCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CAA 90 bp | GCTCTCCCCCTTCCTCCTCAACGGGCGGCTCCAGCCCGGGCTCGGTaGGGGGCTCTCGGAGGAAAGCTGGGAGCAGCAGGCGAGACACGC | + |
|
Preference number: 6 (lower is better) Translates to: ALPLPPQRAAPARAR*GALGGKLGAAGETR Trigger: GCGTGTCTCGCCTGCTGCTCCCAGCTTTCCTCCGAGAGCCCCCAACCGAGCCCGGGCTGGAGCCGCCCGTTGAGGAGGAAGGGGGAGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 72 bp | GCGCACGTACGCCTTGGTCTGCAGGTGATGTGGGGATaGCTCCATGTCCAGGCAGAGGGGCCGGCTCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AHVRLGLQVMWG*LHVQAEGPAPV Trigger: TACCGGAGCCGGCCCCTCTGCCTGGACATGGAGGCATCCCCACATCACCTGCAGACCAAGGCGTACGTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CCA 72 bp | GAACTGGCGCACGTACGCCTTGGTCTGCAGGTGATGTaGGGATGCCTCCATGTCCAGGCAGAGGGGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ELAHVRLGLQVM*GCLHVQAEGPA Trigger: AGCCGGCCCCTCTGCCTGGACATGGAGGCATCCCCACATCACCTGCAGACCAAGGCGTACGTGCGCCAGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 72 bp | CCGCCGGGACCTCCAGTCACCGCTCGCCCCGCCAGCTaGGACGTCTGCTTCTTCAAAAATTTCTCCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGPPVTARPAS*DVCFFKNFSSG Trigger: GCCACTGGAGAAATTTTTGAAGAAGCAGACGTCTCAGCTGGCGGGGCGAGCGGTGACTGGAGGTCCCGGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 72 bp | CCTCACAGAGCAGCACCTCAGTGGCCACCCAGTGAGTaGCCTCGCTGCAACGCTGCAGCAGCAACTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PHRAAPQWPPSE*PRCNAAAATPG Trigger: ACCTGGAGTTGCTGCTGCAGCGTTGCAGCGAGGTCACTCACTGGGTGGCCACTGAGGTGCTGCTCTGTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 72 bp | AGGGCATCCTCGCGCTCCGCAGGCTCCTCCGAGTACTaGAGCTTCTCTGTCACAGAGCCCAGAATGTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RASSRSAGSSEY*SFSVTEPRMSC Trigger: GCAAGACATTCTGGGCTCTGTGACAGAGAAGCTGCAGTACTCGGAGGAGCCTGCGGAGCGCGAGGATGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CAA 72 bp | ATCCGGCGGAAGTGTCGGAAGAGCGGCTTAACCTGCTaGCTGGGCGGCTGGCTCTCTTCTGGAATCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRRKCRKSGLTC*LGGWLSSGIFS Trigger: GCTAAAGATTCCAGAAGAGAGCCAGCCGCCCAGCAAGCAGGTTAAGCCGCTCTTCCGACACTTCCGCCGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS CAA 90 bp | CAGGAATCTATCCGGCGGAAGTGTCGGAAGAGCGGCTTAACCTGCTaGCTGGGCGGCTGGCTCTCTTCTGGAATCTTTAGCTCCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QESIRRKCRKSGLTC*LGGWLSSGIFSSTV Trigger: GACAGTGGAGCTAAAGATTCCAGAAGAGAGCCAGCCGCCCAGCAAGCAGGTTAAGCCGCTCTTCCGACACTTCCGCCGGATAGATTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS TCA 72 bp | ACACATCGGAAGAGCTCCCAGTGGAAAGCAGTCAGGTaGTTGGCCACATCTTCAGGCTCCACCCGGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: THRKSSQWKAVR*LATSSGSTRWI Trigger: GATCCACCGGGTGGAGCCTGAAGATGTGGCCAATCACCTGACTGCTTTCCACTGGGAGCTCTTCCGATGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 72 bp | TCTATCCGGCGGAAGTGTCGGAAGAGCGGCTTAACCTaGTTGCTGGGCGGCTGGCTCTCTTCTGGAATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SIRRKCRKSGLT*LLGGWLSSGIF Trigger: AAAGATTCCAGAAGAGAGCCAGCCGCCCAGCAAGCAGGTTAAGCCGCTCTTCCGACACTTCCGCCGGATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
||
| CDS GCA 72 bp | GTAGACTCGGCAGAAAATCTCATCGGAGCCCCTGAATaGCACTCGGGTCTGCAGACAGGAATCTATCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VDSAENLIGAPE*HSGLQTGIYPA Trigger: CGCCGGATAGATTCCTGTCTGCAGACCCGAGTGGCATTCAGGGGCTCCGATGAGATTTTCTGCCGAGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS CCA 72 bp | TGTCGGAAGAGCGGCTTAACCTGCTTGCTGGGCGGCTaGCTCTCTTCTGGAATCTTTAGCTCCACTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CRKSGLTCLLGG*LSSGIFSSTVS Trigger: GGAGACAGTGGAGCTAAAGATTCCAGAAGAGAGCCAGCCGCCCAGCAAGCAGGTTAAGCCGCTCTTCCGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS CCA 72 bp | GTTGATACCCAGCGTGGTGAAAACGCAGTCCTCCGTTaGCTGGAGGAGGACCTTCTCTCCAGAGGAAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: VDTQRGENAVLR*LEEDLLSRGSN Trigger: GTTGCTTCCTCTGGAGAGAAGGTCCTCCTCCAGCCAACGGAGGACTGCGTTTTCACCACGCTGGGTATCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS CAA 72 bp | TGTCCAGGCAGAGGGGCCGGCTCCGGTATTTTCGGATaGTCCTCACTTTCTCGGCCACTGAATGCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CPGRGAGSGIFG*SSLSRPLNAAS Trigger: AGAAGCTGCATTCAGTGGCCGAGAAAGTGAGGACAATCCGAAAATACCGGAGCCGGCCCCTCTGCCTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS TCA 72 bp | TGTAGGAGAGCTCAAAGAGGTGGTTCTGGTTGTCGATaGCCTGGAACTGGCGCACGTACGCCTTGGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CRRAQRGGSGCR*PGTGARTPWSA Trigger: TGCAGACCAAGGCGTACGTGCGCCAGTTCCAGGTCATCGACAACCAGAACCACCTCTTTGAGCTCTCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS GCA 72 bp | AAAATCTCATCGGAGCCCCTGAATGCCACTCGGGTCTaGAGACAGGAATCTATCCGGCGGAAGTGTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KISSEPLNATRV*RQESIRRKCRK Trigger: CTTCCGACACTTCCGCCGGATAGATTCCTGTCTGCAGACCCGAGTGGCATTCAGGGGCTCCGATGAGATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS CCA 72 bp | GAATGTCTTGCACTGATGCCGAGAGGCGACTGCGTATaGTCACGTAAGAGTGGTCAGGCATGTAGACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: ECLALMPRGDCV*SRKSGQACRLG Trigger: GCCGAGTCTACATGCCTGACCACTCTTACGTGACCATACGCAGTCGCCTCTCGGCATCAGTGCAAGACATTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS CAA 72 bp | GGGTCCGTCAAGCCCTCAAATTTACGGAACAGGTTCTaGAATTTCCCTGGCAGCTTCTCCCAGGTGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GSVKPSNLRNRF*NFPGSFSQVSR Trigger: GCGGCTCACCTGGGAGAAGCTGCCAGGGAAATTCAAGAACCTGTTCCGTAAATTTGAGGGCTTGACGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS TCA 72 bp | GCATGTAGACTCGGCAGAAAATCTCATCGGAGCCCCTaGATGCCACTCGGGTCTGCAGACAGGAATCTATCC | + |
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Preference number: 6 (lower is better) Translates to: ACRLGRKSHRSP*MPLGSADRNLS Trigger: GGATAGATTCCTGTCTGCAGACCCGAGTGGCATTCAGGGGCTCCGATGAGATTTTCTGCCGAGTCTACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS TCA 72 bp | CAGCTTCTCTGTCACAGAGCCCAGAATGTCTTGCACTaGTGCCGAGAGGCGACTGCGTATGGTCACGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: QLLCHRAQNVLH*CREATAYGHVR Trigger: TCTTACGTGACCATACGCAGTCGCCTCTCGGCATCAGTGCAAGACATTCTGGGCTCTGTGACAGAGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS GCA 72 bp | AGCCCAGAATGTCTTGCACTGATGCCGAGAGGCGACTaGGTATGGTCACGTAAGAGTGGTCAGGCATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SPECLALMPRGD*VWSRKSGQACR Trigger: TCTACATGCCTGACCACTCTTACGTGACCATACGCAGTCGCCTCTCGGCATCAGTGCAAGACATTCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS CAA 90 bp | ATGCCTCCATGTCCAGGCAGAGGGGCCGGCTCCGGTATTTTCGGATaGTCCTCACTTTCTCGGCCACTGAATGCAGCTTCTCAATATTCA | + |
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Preference number: 6 (lower is better) Translates to: MPPCPGRGAGSGIFG*SSLSRPLNAASQYS Trigger: TGAATATTGAGAAGCTGCATTCAGTGGCCGAGAAAGTGAGGACAATCCGAAAATACCGGAGCCGGCCCCTCTGCCTGGACATGGAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS TCA 72 bp | CCGGTATTTTCGGATTGTCCTCACTTTCTCGGCCACTaGATGCAGCTTCTCAATATTCACCAGACCATCTAC | + |
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Preference number: 6 (lower is better) Translates to: PVFSDCPHFLGH*MQLLNIHQTIY Trigger: GTAGATGGTCTGGTGAATATTGAGAAGCTGCATTCAGTGGCCGAGAAAGTGAGGACAATCCGAAAATACCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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| CDS GCA 72 bp | TATTTTCGGATTGTCCTCACTTTCTCGGCCACTGAATaGAGCTTCTCAATATTCACCAGACCATCTACGAGG | + |
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Preference number: 6 (lower is better) Translates to: YFRIVLTFSATE*SFSIFTRPSTR Trigger: CCTCGTAGATGGTCTGGTGAATATTGAGAAGCTGCATTCAGTGGCCGAGAAAGTGAGGACAATCCGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107479.3 |
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