RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEF3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022469

Ensembl transcript IDs: ENSMUST00000126854.9, ENSMUST00000128775.9, ENSMUST00000129223.9, ENSMUST00000134371.4, ENSMUST00000134885.3, ENSMUST00000135080.2, ENSMUST00000146620.2, ENSMUST00000149419.9, ENSMUST00000175894.8, ENSMUST00000177352.8

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTaGCCTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAG +
Preference number: 1 (lower is better)
Translates to: QGLESALWRALPSCG*PLDLLVAQALASSE
Trigger: CTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR GCA 90 bp GGGCCACCCATCGGCCAACTAGCCGCAGGATCTGCTGCCTCTTGTTaGAGATGTAGGTGCTGTGCTCCTGCTCGCTGCCTCCAGCAGGGT +
Preference number: 1 (lower is better)
Translates to: GPPIGQLAAGSAASC*RCRCCAPARCLQQG
Trigger: ACCCTGCTGGAGGCAGCGAGCAGGAGCACAGCACCTACATCTGCAACAAGAGGCAGCAGATCCTGCGGCTAGTTGGCCGATGGGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp AGGCCGTCACCGGCAGGTGCAGGGTCAGCACTGAGTGGTCAGGTCTaGAGATGTCGTAGGGGACTTTGTCCCCAACTCGGATGGCACCCG +
Preference number: 1 (lower is better)
Translates to: RPSPAGAGSALSGQV*RCRRGLCPQLGWHP
Trigger: CGGGTGCCATCCGAGTTGGGGACAAAGTCCCCTACGACATCTGCAGACCTGACCACTCAGTGCTGACCCTGCACCTGCCGGTGACGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp GGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTaGTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: GPLGCTGSGFLGESA*SSQSFLMVPAPGRG
Trigger: GCCTCTCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp ACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTaGTCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGG +
Preference number: 1 (lower is better)
Translates to: TDVQMRRRPGGRALY*SRVLYLPALLPTAW
Trigger: CCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR TCA 90 bp GTTCCAGCTCCCGGGAGAGGCGGGACAGTTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTGGACTCC +
Preference number: 1 (lower is better)
Translates to: VPAPGRGGTVPAGCQ*PSAAGHKPRCWLDS
Trigger: GGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCGCCTCTCCCGGGAGCTGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp GGCCAACTAGCCGCAGGATCTGCTGCCTCTTGTTGCAGATGTAGGTaGTGTGCTCCTGCTCGCTGCCTCCAGCAGGGTCTGCTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: GQLAAGSAASCCRCR*CAPARCLQQGLLAP
Trigger: TGGAGCCAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACAGCACCTACATCTGCAACAAGAGGCAGCAGATCCTGCGGCTAGTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp CACCAACACCTGTCCCTTGGTCCAGTGGTCCTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGAGGCCGTCACCGGCAGGTGCAGGGT +
Preference number: 1 (lower is better)
Translates to: HQHLSLGPVVLMGQS*HHFSHRGRHRQVQG
Trigger: ACCCTGCACCTGCCGGTGACGGCCTCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAGGACCACTGGACCAAGGGACAGGTGTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAG +
Preference number: 1 (lower is better)
Translates to: LWTSWLHRLWLPRRE*LLQPVLPHGSSSRE
Trigger: CTCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp TCATCCAGCAACACTTGGCAGATGCCCACGGCTTGGCTCCGTGAGTaGACCCCAAGCCCCAGAGCCAAGATCCCATCCACTAGCTCCCGG +
Preference number: 1 (lower is better)
Translates to: SSSNTWQMPTAWLRE*TPSPRAKIPSTSSR
Trigger: CCGGGAGCTAGTGGATGGGATCTTGGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGCCGTGGGCATCTGCCAAGTGTTGCTGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CCA 90 bp CAAAGGGCACCCTCATCCAGCAACACTTGGCAGATGCCCACGGCTTaGCTCCGTGAGTGGACCCCAAGCCCCAGAGCCAAGATCCCATCC +
Preference number: 1 (lower is better)
Translates to: QRAPSSSNTWQMPTA*LREWTPSPRAKIPS
Trigger: GGATGGGATCTTGGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGCCGTGGGCATCTGCCAAGTGTTGCTGGATGAGGGTGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CCA 90 bp AGGTCTGAGAGTTTCTGGAGGAAGCTGGTGGCCACGGGATCCGAGTaGAGCATCGGGCTATACAGGGCCACCCATCGGCCAACTAGCCGC +
Preference number: 1 (lower is better)
Translates to: RSESFWRKLVATGSE*SIGLYRATHRPTSR
Trigger: GCGGCTAGTTGGCCGATGGGTGGCCCTGTATAGCCCGATGCTCCACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp TCAGCTCATGCACTTCCTGTGGGTCGACAACAAAGAGCCGCTCGTTaGGCCCCAGGGATGTGGCCACACCACGGGCATCTGGCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: SAHALPVGRQQRAAR*APGMWPHHGHLAAS
Trigger: GCTTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp TGCTCCTTGAGGTGGGCTGCCAGCTTGATGAACTTCCTGAGTAGCTaGGCCCGGGAGCCAGGAACAGGGCAGAGACAGAGCTCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: CSLRWAASLMNFLSS*AREPGTGQRQSSVA
Trigger: GGCCACAGAGCTCTGTCTCTGCCCTGTTCCTGGCTCCCGGGCTCAGCTACTCAGGAAGTTCATCAAGCTGGCAGCCCACCTCAAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp TCTGCTGCCTCTTGTTGCAGATGTAGGTGCTGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTGGCTCCACGTGGAAGTGGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: SAASCCRCRCCAPAR*LQQGLLAPRGSGAG
Trigger: TCCTGCACCACTTCCACGTGGAGCCAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACAGCACCTACATCTGCAACAAGAGGCAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp CCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTGGACTCCGGGTaGTCAGGGACTGCTCAGAACACGTGGAGATCCTTGATCCCTGGC +
Preference number: 1 (lower is better)
Translates to: PSAAGHKPRCWLDSG*SGTAQNTWRSLIPG
Trigger: GCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp TGCAGCAGCTCTTCAAAGATCAGGTCCAGTTCTTCATCCGTACGCTaGCCTGGGGGCTTCCGGAGCGCCACGGTGAGTAGGGCATCAGGC +
Preference number: 1 (lower is better)
Translates to: CSSSSKIRSSSSSVR*PGGFRSATVSRASG
Trigger: GCCTGATGCCCTACTCACCGTGGCGCTCCGGAAGCCCCCAGGTCAGCGTACGGATGAAGAACTGGACCTGATCTTTGAAGAGCTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CCA 90 bp CAGCATCTCAGAAGAACCCAGAGTGGGGCCCAGCTGCTCAGGGTGTaGGGTCAGCTCATGCACTTCCTGTGGGTCGACAACAAAGAGCCG +
Preference number: 1 (lower is better)
Translates to: QHLRRTQSGAQLLRV*GQLMHFLWVDNKEP
Trigger: CGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAGCTGACCCCACACCCTGAGCAGCTGGGCCCCACTCTGGGTTCTTCTGAGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp TGGATCAGCTCCACCTGGTGGATCCTGTTGAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCCAGGTCCTTGGCGCTCACTAGGTCC +
Preference number: 1 (lower is better)
Translates to: WISSTWWILLKRFQS*SVSWPARSLALTRS
Trigger: GGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGGAGCTGATCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp GTACACTCGGTGGTTCCAGGAAGGGTCCAGCAACCTTTCCAGGGCTaGGTACAGCTTCCGTACTTTATGGGGCAGGCGCTCCCAGGTGTG +
Preference number: 1 (lower is better)
Translates to: VHSVVPGRVQQPFQG*VQLPYFMGQALPGV
Trigger: CACACCTGGGAGCGCCTGCCCCATAAAGTACGGAAGCTGTACTCAGCCCTGGAAAGGTTGCTGGACCCTTCCTGGAACCACCGAGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp GAATTGACCTTCACCAACACCTGTCCCTTGGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACTTCTCTCACCGAGGCCGTCACCGGC +
Preference number: 1 (lower is better)
Translates to: ELTFTNTCPLVQWSS*AKAAITSLTEAVTG
Trigger: GCCGGTGACGGCCTCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAGGACCACTGGACCAAGGGACAGGTGTTGGTGAAGGTCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp CGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTGATCCCTaGCTGTCCTCGTGGATGTGGGACACTCGGCTTCTGAGTGGTGAT +
Preference number: 1 (lower is better)
Translates to: RVLRDCSEHVEILDP*LSSWMWDTRLLSGD
Trigger: ATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp TCCTTGATCCCTGGCTGTCCTCGTGGATGTGGGACACTCGGCTTCTaGGTGGTGATAGAGGCGCGGTACTGTGACTTCGGCAGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: SLIPGCPRGCGTLGF*VVIEARYCDFGSGE
Trigger: TTCACCACTGCCGAAGTCACAGTACCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp ACCTGGTGGATCCTGTTGAAGAGGTTCCAGTCATGGTCGGTCAGCTaGCCTGCCAGGTCCTTGGCGCTCACTAGGTCCAGCATCTCAGAA +
Preference number: 1 (lower is better)
Translates to: TWWILLKRFQSWSVS*PARSLALTRSSISE
Trigger: TTCTGAGATGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp ATGACAGGAGGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTaGTTCCAGGAAGGGTCCAGCAACCTTTCCAGGGCTGAGTACAGC +
Preference number: 1 (lower is better)
Translates to: MTGGESLVRANRYTR*FQEGSSNLSRAEYS
Trigger: GCTGTACTCAGCCCTGGAAAGGTTGCTGGACCCTTCCTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp GACTGCTCAGAACACGTGGAGATCCTTGATCCCTGGCTGTCCTCGTaGATGTGGGACACTCGGCTTCTGAGTGGTGATAGAGGCGCGGTA +
Preference number: 1 (lower is better)
Translates to: DCSEHVEILDPWLSS*MWDTRLLSGDRGAV
Trigger: TACCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp GTTGTCAATGACCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCT +
Preference number: 1 (lower is better)
Translates to: VVNDLQLLDISPGAG*TPGAQGLLRTRGDP
Trigger: AGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTaGAGAGAAAAGCAGAACTCTCCACCCTCTCCCAGGCAAGGCCCC +
Preference number: 1 (lower is better)
Translates to: LGNSPAYTQLFISDV*REKQNSPPSPRQGP
Trigger: GGGGCCTTGCCTGGGAGAGGGTGGAGAGTTCTGCTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR TCA 90 bp CCTGCTTGTCCACACGCAGAAAGTGACAGTTATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTGCGTCGTTCACCAGAGCCAGCTGTC +
Preference number: 1 (lower is better)
Translates to: PACPHAESDSYFLEG*WWLPEVRRSPEPAV
Trigger: GACAGCTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACCATCATCCTTCGAGAAAATAACTGTCACTTTCTGCGTGTGGACAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp CACACGCAGAAAGTGACAGTTATTTTCTCGAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCACCAGAGCCAGCTGTCCAAAGTCATC +
Preference number: 1 (lower is better)
Translates to: HTQKVTVIFSKDDGG*PRCVVHQSQLSKVI
Trigger: GATGACTTTGGACAGCTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACCATCATCCTTCGAGAAAATAACTGTCACTTTCTGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp TACGTTCCCACAGCCATTTTCCAACCTGTGGTGTCGCCGTCTCTCTaGATACTGTTCCCTCAGCAAGTTGCTAAGTCGGGCATCTCTGCT +
Preference number: 1 (lower is better)
Translates to: YVPTAIFQPVVSPSL*ILFPQQVAKSGISA
Trigger: AGCAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACAGTATCCAGAGAGACGGCGACACCACAGGTTGGAAAATGGCTGTGGGAACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 90 bp TCCTTGATGATGCGGTTGAAGTCCTGCTTGTCCACACGCAGAAAGTaGCAGTTATTTTCTCGAAGGATGATGGTGGCTGCCCGAGGTGCG +
Preference number: 1 (lower is better)
Translates to: SLMMRLKSCLSTRRK*QLFSRRMMVAARGA
Trigger: CGCACCTCGGGCAGCCACCATCATCCTTCGAGAAAATAACTGTCACTTTCTGCGTGTGGACAAGCAGGACTTCAACCGCATCATCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 90 bp AGTTCCCGCTTCACCGAGTTAGAAAGGTGTGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATCAGGTCCAGTTCTTCATCCGTACGC +
Preference number: 1 (lower is better)
Translates to: SSRFTELERCATALI*SSSSKIRSSSSSVR
Trigger: GCGTACGGATGAAGAACTGGACCTGATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCTTTCTAACTCGGTGAAGCGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CCA 90 bp ATCATCCGCATCTTCTCAAAGTTGATGAGGTTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAGGTCACGTCTTTGAGCAGCAGGGGC +
Preference number: 1 (lower is better)
Translates to: IIRIFSKLMRFSTSV*FPSWMKVTSLSSRG
Trigger: GCCCCTGCTGCTCAAAGACGTGACCTTCATCCATGAGGGGAACCACACACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 90 bp CCACACACCCAGGCGGTAGAACACACACGTATCTTTGTTAATTTATaGAAACAATACAACTCCTCTGAGACCACCGCTCTAGGCAACAGC +
Preference number: 1 (lower is better)
Translates to: PHTQAVEHTRIFVNL*KQYNSSETTALGNS
Trigger: GCTGTTGCCTAGAGCGGTGGTCTCAGAGGAGTTGTATTGTTTCCATAAATTAACAAAGATACGTGTGTGTTCTACCGCCTGGGTGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
3UTR-3UTR CCA 90 bp GCGCATGAAGCGCTCCAGGTTCGCGGTGGTGACATCCCGCAGGTGCTGGGGGCCCTGCCCAGCTGTGGCTaGCCTCTGGACCTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: AHEALQVRGGDIPQVLGALPSCG*PLDLLV
Trigger: AACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAG...GGCCCCCAGCACCTGCGGGATGTCACCACCGCGAACCTGGAGCGCTTCATGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp GCGCATGAAGCGCTCCAGGTTCGCGGTGGTGACATCCCGCAGGTGCTGGGGGCCAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCAC +
Preference number: 2 (lower is better)
Translates to: AHEALQVRGGDIPQVLGAKDDGG*PRCVVH
Trigger: GTGAACGACGCACCTCGGGCAGCCACCATCATCCTT...GGCCCCCAGCACCTGCGGGATGTCACCACCGCGAACCTGGAGCGCTTCATGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCACTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPLPRRE*LLQPVL
Trigger: AAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAG...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp AGCATCGGGCTATACAGGGCCACCCATCGGCCAACTAGCCGCAGGATCTGCTGCCTCTGTGGAGAGCCCTaGCCAGCTGTGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SIGLYRATHRPTSRRICCLCGEP*PAVAGL
Trigger: GAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAG...GCAGCAGATCCTGCGGCTAGTTGGCCGATGGGTGGCCCTGTATAGCCCGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp GCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAGAGGCGGGACAGTTCCCGCTGCCACGGGCATCTGGCTaGAAGCCAACGACATCACCG +
Preference number: 2 (lower is better)
Translates to: ASPSSWFQLPGEAGQFPLPRASG*KPTTSP
Trigger: CGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGG...CAGCGGGAACTGTCCCGCCTCTCCCGGGAGCTGGAACCATGAGGAAGGACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGGCCTCTGGACCTCTTaGTTGCACAGGCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPGLWTS*LHRLWL
Trigger: AAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCC...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTTCTGGACCTCTTGGTTaGACAGGCTCTGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: AHSRALSPLCGEPCPAVASGPLG*TGSGFL
Trigger: GAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCTCTGTGGAGAGCCCTaGCCAGCTGTGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYLCGEP*PAVAGL
Trigger: GAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp GACAACAAAGAGCCGCTCGTTGAGCCCCAGGGATGTGGCCACACCACGGGCATCTGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: DNKEPLVEPQGCGHTTGICAPAR*LQQGLL
Trigger: CAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACA...GATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CCCTGGCTGTCCTCGTGGATGTGGGACACTCGGCTTCTGAGTGGTGATAGAGGCGGTGGCTGCCCGAGGTaGGTCGTTCACCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PWLSSWMWDTRLLSGDRGGGCPR*VVHQSQ
Trigger: CTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACC...GCCTCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp TGCTGGCTGGACTCCGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTGGTCGGTCAGCTGGCCTaGCAGGTCCTTGGCGCTCAC +
Preference number: 2 (lower is better)
Translates to: CWLDSGCSGTAQNTWRSLVGQLA*QVLGAH
Trigger: GTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGAC...CAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGAGCCCTGCCCAGCTGTaGCTGGCCTCTGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPESPAQL*LASGPL
Trigger: AAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCT...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR TCA 90 bp CCCTGGCTGTCCTCGTGGATGTGGGACACTCGGCTTCTGAGTGGTGATAGAGGCCAAAGAGCCGCTCGTTaGGCCCCAGGGATGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PWLSSWMWDTRLLSGDRGQRAAR*APGMWP
Trigger: TGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTG...GCCTCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTGTGGAGAGCCCTaGCCAGCTGTGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRALCGEP*PAVAGL
Trigger: GAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAG...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACAACTGCCCCGACACTaGCCACTCCAGGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTQLPRH*PLQGLE
Trigger: CTCAAGGCCCTGGAGTGGGCAGTGTCGGGGCAGTTG...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp TCCAGCAACCTTTCCAGGGCTGAGTACAGCTTCCGTACTTTATGGGGCAGGCGCCCGTATACCGGTTCCTaGCTGGGGTCGGGGGACGGG +
Preference number: 2 (lower is better)
Translates to: SSNLSRAEYSFRTLWGRRPYTGS*LGSGDG
Trigger: CCCGTCCCCCGACCCCAGGCAGGAACCGGTATACGG...GCGCCTGCCCCATAAAGTACGGAAGCTGTACTCAGCCCTGGAAAGGTTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp TGCTGGCTGGACTCCGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTGGTGGCCACCCAGTACTaGAGCTCGTTGAAGCGGCGC +
Preference number: 2 (lower is better)
Translates to: CWLDSGCSGTAQNTWRSLVATQY*SSLKRR
Trigger: GCGCCGCTTCAACGAGCTGCAGTACTGGGTGGCCAC...CAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTAGCCCTGCCCAGCTGTaGCTGGCCTCTGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCSPAQL*LASGPL
Trigger: AAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCT...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp GGTGACATCCCGCAGGTGCTGGGGGCCCAGTACATAATGGATCAGCTCCACCTGAGCCCTGCCCAGCTGTaGCTGGCCTCTGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: GDIPQVLGAQYIMDQLHLSPAQL*LASGPL
Trigger: AAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCT...CAGGTGGAGCTGATCCATTATGTACTGGGCCCCCAGCACCTGCGGGATGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAAGCCCTGCCCAGCTGTaGCTGGCCTCTGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTSPAQL*LASGPL
Trigger: AAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCT...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp CCGGCAGGTGCAGGGTCAGCACTGAGTGGTCAGGTCTGCAGATGTCGTAGGGGACTTGAGTCCGCTCTGTaGAGAGCCCTGCCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: PAGAGSALSGQVCRCRRGLESAL*RALPSC
Trigger: ACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAG...TCCCCTACGACATCTGCAGACCTGACCACTCAGTGCTGACCCTGCACCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp GGTGTGGGCCAGCCGGCTGATGGCCGAGTTGCTGAGGCCAAACATGACCGCAAACTCCCTCGTGCAACGTaGTCACCAGCCCCTTGCCAT +
Preference number: 2 (lower is better)
Translates to: GVGQPADGRVAEAKHDRKLPRAT*SPAPCH
Trigger: ATGGCAAGGGGCTGGTGACCACGTTGCACGAGGGAG...TTTGCGGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCGGCTGGCCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp GTCAGCTCATGCACTTCCTGTGGGTCGACAACAAAGAGCCGCTCGTaGAGCCCCAGGGATGTGGCCACACCACGGGCATCTGGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: VSSCTSCGSTTKSRS*SPRDVATPRASGCK
Trigger: CTTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCAACTGCCCCGACACTaGCCACTCCAGGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRAQLPRH*PLQGLE
Trigger: CTCAAGGCCCTGGAGTGGGCAGTGTCGGGGCAGTTG...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCAACTGCCCCGACACTaGCCACTCCAGGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGQLPRH*PLQGLE
Trigger: CTCAAGGCCCTGGAGTGGGCAGTGTCGGGGCAGTTG...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGCTGTGGCTGGCCTCTaGACCTCTTGGTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHAVAGL*TSWLHR
Trigger: CCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACGCTGTGGCTGGCCTCTaGACCTCTTGGTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYAVAGL*TSWLHR
Trigger: CCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGC...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGAGCCCTGCCCAGCTGTaGCTGGCCTCTGGACCTCTT +
Preference number: 2 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMSPAQL*LASGPL
Trigger: AAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp GAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAGAGGCGGGTACCCTTGTCCCCCTaGCTGAACAACACAGTTCCT +
Preference number: 2 (lower is better)
Translates to: ECLLQPVLPHGSSSRERRVPLSP*LNNTVP
Trigger: AGGAACTGTGTTGTTCAGCCAGGGGGACAAGGGTAC...CCGCCTCTCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TCGGAGAGAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGACCAACACCTGTCCCTTaGTCCAGTGGTCCTCATGGG +
Preference number: 2 (lower is better)
Translates to: SERVPAPASPSSWFQLPGPTPVP*SSGPHG
Trigger: CCCATGAGGACCACTGGACCAAGGGACAGGTGTTGG...TCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR TCA 90 bp GAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAGAGGCGGCCCTTTCCTTGGCCGTaGACAAAGATCTCCATAGCT +
Preference number: 2 (lower is better)
Translates to: ECLLQPVLPHGSSSRERRPFPWP*TKISIA
Trigger: AGCTATGGAGATCTTTGTTCACGGCCAAGGAAAGGG...CCGCCTCTCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp ACCAGAGCCAGCTGTCCAAAGTCATCTCCCTCGTGCAACGTGGTCACCAGCCCCCTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: TRASCPKSSPSCNVVTSPLPRRE*LLQPVL
Trigger: AAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAG...GGGGCTGGTGACCACGTTGCACGAGGGAGATGACTTTGGACAGCTGGCTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCTGGACCTCTTGGTTaGACAGGCTCTGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPESGPLG*TGSGFL
Trigger: GAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp GGTGACATCCCGCAGGTGCTGGGGGCCCAGTACATAATGGATCAGCTCCACCTGTCCACGTGGAAGTGGTaGAGGAGGGCAGTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: GDIPQVLGAQYIMDQLHLSTWKW*RRAVKS
Trigger: GCTCTTCACTGCCCTCCTGCACCACTTCCACGTGGA...CAGGTGGAGCTGATCCATTATGTACTGGGCCCCCAGCACCTGCGGGATGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp GCGCATGAAGCGCTCCAGGTTCGCGGTGGTGACATCCCGCAGGTGCTGGGGGCCGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: AHEALQVRGGDIPQVLGAELRPL*RVLPVS
Trigger: TGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTC...GGCCCCCAGCACCTGCGGGATGTCACCACCGCGAACCTGGAGCGCTTCATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCTGTGGCTGGCCTCTaGACCTCTTGGTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMAVAGL*TSWLHR
Trigger: CCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGCCCAGCTGTGGCTaGCCTCTGGACCTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: MQMYRRADAQKARWEGSLLPSCG*PLDLLV
Trigger: AACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAG...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp TGCTGGCTGGACTCCGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTGGTTTCTGGAGGAAGCTaGTGGCCACGGGATCCGAGT +
Preference number: 2 (lower is better)
Translates to: CWLDSGCSGTAQNTWRSLVSGGS*WPRDPS
Trigger: ACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAAC...CAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TCGGAGAGAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACT +
Preference number: 2 (lower is better)
Translates to: SERVPAPASPSSWFQLPGVQWSS*AKAAIT
Trigger: AGTGATGGCAGCTTTGGCCCATGAGGACCACTGGAC...TCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TCGGAGAGAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGACTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: SERVPAPASPSSWFQLPGLSSWM*DTRLLS
Trigger: ACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAG...TCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp TTGAAGAGGTTCCAGTCATGGTCGGTCAGCTGGCCTGCCAGGTCCTaGGCGCTCACTAGGTCCAGCATCTCAGAAGAACCCAGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: LKRFQSWSVSWPARS*ALTRSSISEEPRVG
Trigger: CCCCACTCTGGGTTCTTCTGAGATGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRALPRRE*LLQPVL
Trigger: AAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAG...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCTCTGGACCTCTTGGTTaGACAGGCTCTGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTSGPLG*TGSGFL
Trigger: GAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACTCTGGACCTCTTGGTTaGACAGGCTCTGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYSGPLG*TGSGFL
Trigger: GAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCACTCTGTGGAGAGCCCTaGCCAGCTGTGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPLCGEP*PAVAGL
Trigger: GAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAG...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACAACTGCCCCGACACTaGCCACTCCAGGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKQLPRH*PLQGLE
Trigger: CTCAAGGCCCTGGAGTGGGCAGTGTCGGGGCAGTTG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp GACAACAAAGAGCCGCTCGTTGAGCCCCAGGGATGTGGCCACACCACGGGCATCCTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGA +
Preference number: 2 (lower is better)
Translates to: DNKEPLVEPQGCGHTTGILMGQS*HHFSHR
Trigger: TCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAG...GATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGGCCTCTGGACCTCTTaGTTGCACAGGCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPGLWTS*LHRLWL
Trigger: AAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAGGCCTCTGGACCTCTTaGTTGCACAGGCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASGLWTS*LHRLWL
Trigger: AAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCC...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp TGTGGCCACACCACGGGCATCTGGCTGCAAGCCAACGACATCACCGGCAGAATTGGCCTCTGGACCTCTTaGTTGCACAGGCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: CGHTTGIWLQANDITGRIGLWTS*LHRLWL
Trigger: AAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCC...AATTCTGCCGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp ATGCACTTCCTGTGGGTCGACAACAAAGAGCCGCTCGTTGAGCCCCAGGGATGTGCTGTGGCTGGCCTCTaGACCTCTTGGTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: MHFLWVDNKEPLVEPQGCAVAGL*TSWLHR
Trigger: CCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGC...ACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTCGACCCACAGGAAGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp GAGGGCCATAGCCTCAACAAGCTCCTCTTCCACATCTTGAGTTCCTGTAGGCTCGCTTGGCTCCGTGAGTaGACCCCAAGCCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: EGHSLNKLLFHILSSCRLAWLRE*TPSPRA
Trigger: GGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGC...GAGCCTACAGGAACTCAAGATGTGGAAGAGGAGCTTGTTGAGGCTATGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR-3UTR CCA 90 bp GTCAGCTGGCCTGCCAGGTCCTTGGCGCTCACTAGGTCCAGCATCTCAGAAGAACACACCACGGGCATCTaGCTGCAAGCCAACGACATC +
Preference number: 2 (lower is better)
Translates to: VSWPARSLALTRSSISEEHTTGI*LQANDI
Trigger: GATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTG...TTCTTCTGAGATGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TGCTGGCTGGACTCCGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTGAGAGACAGAGCTCTGTaGCCACCCAGTACTGCAGCT +
Preference number: 2 (lower is better)
Translates to: CWLDSGCSGTAQNTWRSLRDRAL*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACAGAGCTCTGTCTCT...CAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp CTGGGACAGGAGGGCCATAGCCTCAACAAGCTCCTCTTCCACATCTaGAGTTCCTGTAGGCTCGGGCTCCGGTCCAGGGAACCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: LGQEGHSLNKLLFHI*SSCRLGLRSREPVE
Trigger: TTCTACAGGTTCCCTGGACCGGAGCCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGAGCTTGTTGAGGCTATGGCCCTCCTGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR-3UTR TCA 90 bp ATGTGGCCACACCACGGGCATCTGGCTGCAAGCCAACGACATCACCGGCAGAATGGTGTGCCACCGCCTTaGTATGCAGCAGCTCTTCAA +
Preference number: 2 (lower is better)
Translates to: MWPHHGHLAASQRHHRQNGVPPP*YAAALQ
Trigger: TTGAAGAGCTGCTGCATATCAAGGCGGTGGCACACC...ATTCTGCCGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTGGCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR TCA 90 bp TGCTGGCTGGACTCCGGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTGTATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTG +
Preference number: 2 (lower is better)
Translates to: CWLDSGCSGTAQNTWRSLYFLEG*WWLPEV
Trigger: CACCTCGGGCAGCCACCATCATCCTTCGAGAAAATA...CAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGCCCAGCTGTGGCTaGCCTCTGGACCTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKLPSCG*PLDLLV
Trigger: AACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGCTTGAGTCCGCTCTGTaGAGAGCCCTGCCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: TALGNSPAYTQLFISDVWLESAL*RALPSC
Trigger: ACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAG...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTTGAGTCCGCTCTGTaGAGAGCCCTGCCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKLESAL*RALPSC
Trigger: ACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp GTCAGCTGGCCTGCCAGGTCCTTGGCGCTCACTAGGTCCAGCATCTCAGAAGAAAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACG +
Preference number: 2 (lower is better)
Translates to: VSWPARSLALTRSSISEERSESF*RKLVAT
Trigger: CGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...TTCTTCTGAGATGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp CCCTCGTGCAACGTGGTCACCAGCCCCTTGCCATGGGTCACCACATaGACAGATCCCTTCCAGATAATGTACCACGAGGTACCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: PSCNVVTSPLPWVTT*TDPFQIMYHEVPLS
Trigger: GGACAAGGGTACCTCGTGGTACATTATCTGGAAGGGATCTGTCAATGTGGTGACCCATGGCAAGGGGCTGGTGACCACGTTGCACGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR TCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCCTTTCCTTGGCCGTaGACAAAGATCTCCATAGCT +
Preference number: 2 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYPFPWP*TKISIA
Trigger: AGCTATGGAGATCTTTGTTCACGGCCAAGGAAAGGG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp ATGACAGGAGGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTGGTTCCAGTCTGGACCTCTTGGTTaGACAGGCTCTGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: MTGGESLVRANRYTRWFQSGPLG*TGSGFL
Trigger: GAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA...CTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGCTGTGGCTGGCCTCTaGACCTCTTGGTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPAVAGL*TSWLHR
Trigger: CCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGC...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGCTGCCCAGCTGTGGCTaGCCTCTGGACCTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVLPSCG*PLDLLV
Trigger: AACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAG...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR CAA 90 bp CCAACGACATCACCGGCAGAATTGACCTTCACCAACACCTGTCCCTaGGTCCAGTGGTCCTCATGGGCCAAAGCTGCCATCACTTCTCTC +
Preference number: 2 (lower is better)
Translates to: PTTSPAELTFTNTCP*VQWSSWAKAAITSL
Trigger: GAGAGAAGTGATGGCAGCTTTGGCCCATGAGGACCACTGGACCAAGGGACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGTCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR TCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGCCCTTTCCTTGGCCGTaGACAAAGATCTCCATAGCT +
Preference number: 2 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMPFPWP*TKISIA
Trigger: AGCTATGGAGATCTTTGTTCACGGCCAAGGAAAGGG...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR TCA 90 bp ATGACAGGAGGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTGGTTCCAGTCTGCTCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: MTGGESLVRANRYTRWFQSAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGAGCAGA...CTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTCTGTGGAGAGCCCTaGCCAGCTGTGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTNCADVSSLCGEP*PAVAGL
Trigger: GAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAG...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGCTTGAGTCCGCTCTGTaGAGAGCCCTGCCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: GNSPAYTQLFISDVWREKLESAL*RALPSC
Trigger: ACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAG...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR-3UTR CCA 90 bp ATGACAGGAGGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTGGTTCCAGGGCATGAAGACACTGTaGGTCAGCAGGAAGTCACTG +
Preference number: 2 (lower is better)
Translates to: MTGGESLVRANRYTRWFQGMKTL*VSRKSL
Trigger: CAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC...CTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp TTCCCGCTTCACCGAGTTAGAAAGGTGTGCCACCGCCTTGATATGCAGCAGCTCAGGGCAGTGAAGAGCTaGGTGCTGGGCATGAAGACA +
Preference number: 2 (lower is better)
Translates to: FPLHRVRKVCHRLDMQQLRAVKS*VLGMKT
Trigger: TGTCTTCATGCCCAGCACCCAGCTCTTCACTGCCCT...GAGCTGCTGCATATCAAGGCGGTGGCACACCTTTCTAACTCGGTGAAGCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp AACCTGTGGTGTCGCCGTCTCTCTGGATACTGTTCCCTCAGCAAGTaGCTAAGTCGGGCATCTCTGCTCACCAGGTCTGAGAGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: NLWCRRLSGYCSLSK*LSRASLLTRSESFW
Trigger: CCAGAAACTCTCAGACCTGGTGAGCAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACAGTATCCAGAGAGACGGCGACACCACAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAACTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKLPRRE*LLQPVL
Trigger: AAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAG...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGTCTGGACCTCTTGGTTaGACAGGCTCTGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVSGPLG*TGSGFL
Trigger: GAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp ATGACAGGAGGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTGGTTCCAGTCTGCTGCCTCTTGTTaGAGATGTAGGTGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: MTGGESLVRANRYTRWFQSAASC*RCRCCA
Trigger: AGCACAGCACCTACATCTGCAACAAGAGGCAGCAGA...CTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGGGCCTCTGGACCTCTTaGTTGCACAGGCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: GNSPAYTQLFISDVWREKGLWTS*LHRLWL
Trigger: AAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCC...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR-3UTR CCA 90 bp GCTCTGGCCATCATCCGCATCTTCTCAAAGTTGATGAGGTTCTCTACCAGTGTGTCTGCTGGCTCCACGTaGAAGTGGTGCAGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: ALAIIRIFSKLMRFSTSVSAGST*KWCRRA
Trigger: TGCCCTCCTGCACCACTTCCACGTGGAGCCAGCAGA...CACACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCGGATGATGGCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp TTGAGTTCCTGTAGGCTCGGGCTCCGGTCCAGGGAACCTGTAGAATaGGGCATCTCGGTCCTGGAAGGTCCAGTCATGTTTTACATGACA +
Preference number: 2 (lower is better)
Translates to: LSSCRLGLRSREPVE*GISVLEGPVMFYMT
Trigger: TGTCATGTAAAACATGACTGGACCTTCCAGGACCGAGATGCCCAATTCTACAGGTTCCCTGGACCGGAGCCCGAGCCTACAGGAACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CAA 90 bp CTGATGGCCGAGTTGCTGAGGCCAAACATGACCGCAAAGAAAGAGTaGAGGTTCTTCTGCTCCTTGAGGTGGGCTGCCAGCTTGATGAAC +
Preference number: 2 (lower is better)
Translates to: LMAELLRPNMTAKKE*RFFCSLRWAASLMN
Trigger: GTTCATCAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGTCATGTTTGGCCTCAGCAACTCGGCCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR TCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACCCTTTCCTTGGCCGTaGACAAAGATCTCCATAGCT +
Preference number: 2 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKPFPWP*TKISIA
Trigger: AGCTATGGAGATCTTTGTTCACGGCCAAGGAAAGGG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAACAGTCGTACAGACTTaGAAACATGCAGATGTACAG +
Preference number: 2 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTTVVQT*KHADVQ
Trigger: CTGTACATCTGCATGTTTGCAAGTCTGTACGACTGT...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp ACGACATCACCGGCAGAATTGACCTTCACCAACACCTGTCCCTTGGTCCAGTGGGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATC +
Preference number: 2 (lower is better)
Translates to: TTSPAELTFTNTCPLVQWATALI*SSSSKI
Trigger: GATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGC...CCACTGGACCAAGGGACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 90 bp GCAGCTAGTTCCCGCTTCACCGAGTTAGAAAGGTGTGCCACCGCCTaGATATGCAGCAGCTCTTCAAAGATCAGGTCCAGTTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: AASSRFTELERCATA*ICSSSSKIRSSSSS
Trigger: GGATGAAGAACTGGACCTGATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCTTTCTAACTCGGTGAAGCGGGAACTAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCACCCTTTCCTTGGCCGTaGACAAAGATCTCCATAGCT +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPPFPWP*TKISIA
Trigger: AGCTATGGAGATCTTTGTTCACGGCCAAGGAAAGGG...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTNCADVSSLPRRE*LLQPVL
Trigger: AAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAG...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCACAGTCGTACAGACTTaGAAACATGCAGATGTACAG +
Preference number: 2 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPTVVQT*KHADVQ
Trigger: CTGTACATCTGCATGTTTGCAAGTCTGTACGACTGT...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
3UTR-3UTR GCA 90 bp AAAGAAAGAGTTGAGGTTCTTCTGCTCCTTGAGGTGGGCTGCCAGCTTGATGAAAAGTCATCTCCCTCGTaGAACGTGGTCACCAGCCCC +
Preference number: 2 (lower is better)
Translates to: KERVEVLLLLEVGCQLDEKSSPS*NVVTSP
Trigger: GGGGCTGGTGACCACGTTGCACGAGGGAGATGACTT...TTCATCAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCTCAACTCTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR GCA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGACAGACTTGCAAACATaGAGATGTACAGACGTGCAG +
Preference number: 2 (lower is better)
Translates to: TALGNSPAYTQLFISDVWTDLQT*RCTDVQ
Trigger: CTGCACGTCTGTACATCTGCATGTTTGCAAGTCTGT...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR-3UTR GCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAACAGACTTGCAAACATaGAGATGTACAGACGTGCAG +
Preference number: 2 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKTDLQT*RCTDVQ
Trigger: CTGCACGTCTGTACATCTGCATGTTTGCAAGTCTGT...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR GCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAACACACACACAAACTGTaGAGATGTGAGCTCACTGGC +
Preference number: 2 (lower is better)
Translates to: LGNSPAYTQLFISDVWREHTHKL*RCELTG
Trigger: GCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTG...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR-3UTR GCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAACAGTCGTACAGACTTaGAAACATGCAGATGTACAG +
Preference number: 2 (lower is better)
Translates to: LGNSPAYTQLFISDVWRETVVQT*KHADVQ
Trigger: CTGTACATCTGCATGTTTGCAAGTCTGTACGACTGT...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCAACAGACTTGCAAACATaGAGATGTACAGACGTGCAG +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTNCADVSSTDLQT*RCTDVQ
Trigger: CTGCACGTCTGTACATCTGCATGTTTGCAAGTCTGT...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR-3UTR CAA 90 bp GACAACAAAGAGCCGCTCGTTGAGCCCCAGGGATGTGGCCACACCACGGGCATCTGGCACCCGCGCTGCTaGGGAGGGGTTCCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: DNKEPLVEPQGCGHTTGIWHPRC*GGVPPG
Trigger: ACCAGGAGGAACCCCTCCCAAGCAGCGCGGGTGCCA...GATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GAGCCCTGCCCAGCTGTGGCTGGCCTCTGGACCTCTTaGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGC +
Preference number: 3 (lower is better)
Translates to: EPCPAVAGLWTS*LHRLWLPRREC
Trigger: GCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR CCA 72 bp GAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTaGCCTCTGGACCTCTTGGTTGCACAGGCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: ESALWRALPSCG*PLDLLVAQALA
Trigger: AGCCAGAGCCTGTGCAACCAAGAGGTCCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR CCA 72 bp TGCTCGCTGCCTCCAGCAGGGTCTGCTGGCTCCACGTaGAAGTGGTGCAGGAGGGCAGTGAAGAGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: CSLPPAGSAGST*KWCRRAVKSWV
Trigger: CACCCAGCTCTTCACTGCCCTCCTGCACCACTTCCACGTGGAGCCAGCAGACCCTGCTGGAGGCAGCGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134371.4
ENSMUST00000175894.8
3UTR CCA 72 bp TCGGAGAGAGTGCCTGCTCCAGCCAGTCCTTCCTCATaGTTCCAGCTCCCGGGAGAGGCGGGACAGTTCCCG +
Preference number: 3 (lower is better)
Translates to: SERVPAPASPSS*FQLPGEAGQFP
Trigger: CGGGAACTGTCCCGCCTCTCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp CCCTCATCCAGCAACACTTGGCAGATGCCCACGGCTTaGCTCCGTGAGTGGACCCCAAGCCCCAGAGCCAAG +
Preference number: 3 (lower is better)
Translates to: PSSSNTWQMPTA*LREWTPSPRAK
Trigger: CTTGGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGCCGTGGGCATCTGCCAAGTGTTGCTGGATGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR-3UTR CAA 90 bp AGCCGCTCGTTGAGCCCCAGGGATGTGGCCACACCACGGGCATCTGGCTGCAAGCTCTGGACCTCTTGGTaGCACAGGCTCTGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: SRSLSPRDVATPRASGCKLWTSW*HRLWLP
Trigger: AGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG...CTTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CAA 90 bp GCGCATGAAGCGCTCCAGGTTCGCGGTGGTGACATCCCGCAGGTGCTGGGGGCCACCTGGTGGATCCTGTaGAAGAGGTTCCAGTCATGG +
Preference number: 3 (lower is better)
Translates to: AHEALQVRGGDIPQVLGATWWIL*KRFQSW
Trigger: CCATGACTGGAACCTCTTCAACAGGATCCACCAGGT...GGCCCCCAGCACCTGCGGGATGTCACCACCGCGAACCTGGAGCGCTTCATGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp CAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTaGTCCAGAGTCCTGTACCTCCCAGCTCTCCTACCC +
Preference number: 3 (lower is better)
Translates to: QMRRRPGGRALY*SRVLYLPALLP
Trigger: GGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR TCA 72 bp CACCGAGGCCGTCACCGGCAGGTGCAGGGTCAGCACTaGGTGGTCAGGTCTGCAGATGTCGTAGGGGACTTT +
Preference number: 3 (lower is better)
Translates to: HRGRHRQVQGQH*VVRSADVVGDF
Trigger: AAAGTCCCCTACGACATCTGCAGACCTGACCACTCAGTGCTGACCCTGCACCTGCCGGTGACGGCCTCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp CCCGGGAGAGGCGGGACAGTTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACATAAGCCCAGGTGCTGG +
Preference number: 3 (lower is better)
Translates to: PGRGGTVPAGCQ*PSAAGHKPRCW
Trigger: CCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCGCCTCTCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp GACAAAGGGCACCCTCATCCAGCAACACTTGGCAGATaGCCACGGCTTGGCTCCGTGAGTGGACCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: DKGHPHPATLGR*PRLGSVSGPQA
Trigger: GGCTTGGGGTCCACTCACGGAGCCAAGCCGTGGGCATCTGCCAAGTGTTGCTGGATGAGGGTGCCCTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR GCA 72 bp GCCGCAGGATCTGCTGCCTCTTGTTGCAGATGTAGGTaGTGTGCTCCTGCTCGCTGCCTCCAGCAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: AAGSAASCCRCR*CAPARCLQQGL
Trigger: CAGACCCTGCTGGAGGCAGCGAGCAGGAGCACAGCACCTACATCTGCAACAAGAGGCAGCAGATCCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp GCCATCACTTCTCTCACCGAGGCCGTCACCGGCAGGTaGAGGGTCAGCACTGAGTGGTCAGGTCTGCAGATG +
Preference number: 3 (lower is better)
Translates to: AITSLTEAVTGR*RVSTEWSGLQM
Trigger: CATCTGCAGACCTGACCACTCAGTGCTGACCCTGCACCTGCCGGTGACGGCCTCGGTGAGAGAAGTGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp CTGTCCCTTGGTCCAGTGGTCCTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGAGGCCGTCACCGGCAG +
Preference number: 3 (lower is better)
Translates to: LSLGPVVLMGQS*HHFSHRGRHRQ
Trigger: CTGCCGGTGACGGCCTCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAGGACCACTGGACCAAGGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp GGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTaGTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: GCTGSGFLGESA*SSQSFLMVPAP
Trigger: GGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp AGTTTCTGGAGGAAGCTGGTGGCCACGGGATCCGAGTaGAGCATCGGGCTATACAGGGCCACCCATCGGCCA +
Preference number: 3 (lower is better)
Translates to: SFWRKLVATGSE*SIGLYRATHRP
Trigger: TGGCCGATGGGTGGCCCTGTATAGCCCGATGCTCCACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GACTTTGTCCCCAACTCGGATGGCACCCGCGCTGCTTaGGAGGGGTTCCTCCTGGTTAGGGAGCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: DFVPNSDGTRAA*EGFLLVREPNR
Trigger: CCTGTTTGGCTCCCTAACCAGGAGGAACCCCTCCCAAGCAGCGCGGGTGCCATCCGAGTTGGGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp CCTGGCTGTCCTCGTGGATGTGGGACACTCGGCTTCTaGGTGGTGATAGAGGCGCGGTACTGTGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: PGCPRGCGTLGF*VVIEARYCDFG
Trigger: GCCGAAGTCACAGTACCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp CCGGCAGGTGCAGGGTCAGCACTGAGTGGTCAGGTCTaGAGATGTCGTAGGGGACTTTGTCCCCAACTCGGA +
Preference number: 3 (lower is better)
Translates to: PAGAGSALSGQV*RCRRGLCPQLG
Trigger: TCCGAGTTGGGGACAAAGTCCCCTACGACATCTGCAGACCTGACCACTCAGTGCTGACCCTGCACCTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp AGCCCCAGGGATGTGGCCACACCACGGGCATCTGGCTaGAAGCCAACGACATCACCGGCAGAATTGACCTTC +
Preference number: 3 (lower is better)
Translates to: SPRDVATPRASG*KPTTSPAELTF
Trigger: GAAGGTCAATTCTGCCGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GTTGAGCCCCAGGGATGTGGCCACACCACGGGCATCTaGCTGCAAGCCAACGACATCACCGGCAGAATTGAC +
Preference number: 3 (lower is better)
Translates to: VEPQGCGHTTGI*LQANDITGRID
Trigger: GTCAATTCTGCCGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp CTGCTCAGGGTGTGGGGTCAGCTCATGCACTTCCTGTaGGTCGACAACAAAGAGCCGCTCGTTGAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: LLRVWGQLMHFL*VDNKEPLVEPQ
Trigger: CTGGGGCTCAACGAGCGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAGCTGACCCCACACCCTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp TCCACCTGGTGGATCCTGTTGAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCCAGGTCCTTGGCGCTC +
Preference number: 3 (lower is better)
Translates to: STWWILLKRFQS*SVSWPARSLAL
Trigger: GAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GACCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGACTGCTCAGAACACGT +
Preference number: 3 (lower is better)
Translates to: DLQLLDISPGAG*TPGAQGLLRTR
Trigger: ACGTGTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CAA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCTCTGGACCTCTTGGTaGCACAGGCTCTGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYLWTSW*HRLWLP
Trigger: AGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CAA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGCTCTGGACCTCTTGGTaGCACAGGCTCTGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: YRRADAQKARWEGSLLIQLWTSW*HRLWLP
Trigger: AGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CAA 90 bp GGTGACATCCCGCAGGTGCTGGGGGCCCAGTACATAATGGATCAGCTCCACCTGTACCACGAGGTACCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 3 (lower is better)
Translates to: GDIPQVLGAQYIMDQLHLYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGTACCTCGTGGTA...CAGGTGGAGCTGATCCATTATGTACTGGGCCCCCAGCACCTGCGGGATGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CAA 90 bp AGCCGCTCGTTGAGCCCCAGGGATGTGGCCACACCACGGGCATCTGGCTGCAAGCCATGGGTCACCACATaGACAGATCCCTTCCAGATA +
Preference number: 3 (lower is better)
Translates to: SRSLSPRDVATPRASGCKPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAATGTGGTGACCCATGG...CTTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp GGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTTaGTCCCTGGCTGTCCTCGTGGATGTGGGACACTCG +
Preference number: 3 (lower is better)
Translates to: GAQGLLRTRGDP*SLAVLVDVGHS
Trigger: CGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp TTCACCAGAGCCAGCTGTCCAAAGTCATCTCCCTCGTaGAACGTGGTCACCAGCCCCTTGCCATGGGTCACC +
Preference number: 3 (lower is better)
Translates to: FTRASCPKSSPS*NVVTSPLPWVT
Trigger: GGTGACCCATGGCAAGGGGCTGGTGACCACGTTGCACGAGGGAGATGACTTTGGACAGCTGGCTCTGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp TCTTGTTGCAGATGTAGGTGCTGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTGGCTCCACGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: SCCRCRCCAPAR*LQQGLLAPRGS
Trigger: ACTTCCACGTGGAGCCAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACAGCACCTACATCTGCAACAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp TGGGAGGGGTTCCTCCTGGTTAGGGAGCCAAACAGGTaGATTCCGGGCCTTGGTCTGAGGAGATACGTTCCC +
Preference number: 3 (lower is better)
Translates to: WEGFLLVREPNR*IPGLGLRRYVP
Trigger: GGGAACGTATCTCCTCAGACCAAGGCCCGGAATGCACCTGTTTGGCTCCCTAACCAGGAGGAACCCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp TCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTaGCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: SWLHRLWLPRRE*LLQPVLPHGSS
Trigger: GCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp CTCTGCTCACCAGGTCTGAGAGTTTCTGGAGGAAGCTaGTGGCCACGGGATCCGAGTGGAGCATCGGGCTAT +
Preference number: 3 (lower is better)
Translates to: LCSPGLRVSGGS*WPRDPSGASGY
Trigger: ATAGCCCGATGCTCCACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCTGGTGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp TCCAGTCATGGTCGGTCAGCTGGCCTGCCAGGTCCTTaGCGCTCACTAGGTCCAGCATCTCAGAAGAACCCA +
Preference number: 3 (lower is better)
Translates to: SSHGRSAGLPGP*RSLGPASQKNP
Trigger: TGGGTTCTTCTGAGATGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp ATCCTGTTGAAGAGGTTCCAGTCATGGTCGGTCAGCTaGCCTGCCAGGTCCTTGGCGCTCACTAGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: ILLKRFQSWSVS*PARSLALTRSS
Trigger: GCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTaGTTCCAGGAAGGGTCCAGCAACCTTTCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: GESLVRANRYTR*FQEGSSNLSRA
Trigger: AGCCCTGGAAAGGTTGCTGGACCCTTCCTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GTGGAGATCCTTGATCCCTGGCTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGTGGTGATAGAGGCGCG +
Preference number: 3 (lower is better)
Translates to: VEILDPWLSSWM*DTRLLSGDRGA
Trigger: CGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CAA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCACTCTGGACCTCTTGGTaGCACAGGCTCTGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASLWTSW*HRLWLP
Trigger: AGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000175894.8
ENSMUST00000177352.8
3UTR-3UTR CAA 90 bp TCGGAGAGAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGATGTTCCCTCAGCAAGTaGCTAAGTCGGGCATCTCTG +
Preference number: 3 (lower is better)
Translates to: SERVPAPASPSSWFQLPGCSLSK*LSRASL
Trigger: CAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACA...TCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCTCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp TCTTCAAAGATCAGGTCCAGTTCTTCATCCGTACGCTaGCCTGGGGGCTTCCGGAGCGCCACGGTGAGTAGG +
Preference number: 3 (lower is better)
Translates to: SSKIRSSSSSVR*PGGFRSATVSR
Trigger: CCTACTCACCGTGGCGCTCCGGAAGCCCCCAGGTCAGCGTACGGATGAAGAACTGGACCTGATCTTTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CCA 72 bp GTGGGTCAGCAGGAAGTCACTGAGGAACGTCTCTGTTaGGCAGGGTTAGGGTTGGGAAGGGATTTCAGCCCG +
Preference number: 3 (lower is better)
Translates to: VGQQEVTEERLC*AGLGLGRDFSP
Trigger: CGGGCTGAAATCCCTTCCCAACCCTAACCCTGCCCAACAGAGACGTTCCTCAGTGACTTCCTGCTGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134371.4
3UTR CCA 72 bp TGCTCACCAGGTCTGAGAGTTTCTGGAGGAAGCTGGTaGCCACGGGATCCGAGTGGAGCATCGGGCTATACA +
Preference number: 3 (lower is better)
Translates to: CSPGLRVSGGSW*PRDPSGASGYT
Trigger: TGTATAGCCCGATGCTCCACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCTGGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp TTCACCAACACCTGTCCCTTGGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACTTCTCTCACCGAGGCC +
Preference number: 3 (lower is better)
Translates to: FTNTCPLVQWSS*AKAAITSLTEA
Trigger: GGCCTCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAGGACCACTGGACCAAGGGACAGGTGTTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp AGGGACTGCTCAGAACACGTGGAGATCCTTGATCCCTaGCTGTCCTCGTGGATGTGGGACACTCGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RDCSEHVEILDP*LSSWMWDTRLL
Trigger: CAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp GTCGTACAGACTTGCAAACATGCAGATGTACAGACGTaGAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: VVQTCKHADVQT*RCAEGPVGGLS
Trigger: AGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTGCAAGTCTGTACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR-3UTR CAA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCCTCTGGACCTCTTGGTaGCACAGGCTCTGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: THTHTHTHKLCRCELTGPLWTSW*HRLWLP
Trigger: AGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR TCA 72 bp CATCTGGCTGCAAGCCAACGACATCACCGGCAGAATTaGCCTTCACCAACACCTGTCCCTTGGTCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: HLAASQRHHRQN*PSPTPVPWSSG
Trigger: ACCACTGGACCAAGGGACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGTCGTTGGCTTGCAGCCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp GGTACCCTTGTCCCCCTGGCTGAACAACACAGTTCCTaGCTTGCTGTGTGGTTCAAAGAGCAGAACAGCAGC +
Preference number: 3 (lower is better)
Translates to: GTLVPLAEQHSS*LAVWFKEQNSS
Trigger: GCTGCTGTTCTGCTCTTTGAACCACACAGCAAGGCAGGAACTGTGTTGTTCAGCCAGGGGGACAAGGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp GAACACGTGGAGATCCTTGATCCCTGGCTGTCCTCGTaGATGTGGGACACTCGGCTTCTGAGTGGTGATAGA +
Preference number: 3 (lower is better)
Translates to: EHVEILDPWLSS*MWDTRLLSGDR
Trigger: TCTATCACCACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp CCACACGCAGAAAGTGACAGTTATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTGCGTCGTTCACCAGAG +
Preference number: 3 (lower is better)
Translates to: PHAESDSYFLEG*WWLPEVRRSPE
Trigger: CTCTGGTGAACGACGCACCTCGGGCAGCCACCATCATCCTTCGAGAAAATAACTGTCACTTTCTGCGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp AGCAGGAAGTCACTGAGGAACGTCTCTGTTGGGTCATaGGCACTGGAATCCGGTCTCATAGCCTCCAACAGC +
Preference number: 3 (lower is better)
Translates to: SRKSLRNVSVGS*ALESGLIASNS
Trigger: GCTGTTGGAGGCTATGAGACCGGATTCCAGTGCTCATGACCCAACAGAGACGTTCCTCAGTGACTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp TTAGGGAGCCAAACAGGTGCATTCCGGGCCTTGGTCTaGGGAGATACGTTCCCACAGCCATTTTCCAACCTG +
Preference number: 3 (lower is better)
Translates to: LGSQTGAFRALV*GDTFPQPFSNL
Trigger: CAGGTTGGAAAATGGCTGTGGGAACGTATCTCCTCAGACCAAGGCCCGGAATGCACCTGTTTGGCTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp GTACATAATGGATCAGCTCCACCTGGTGGATCCTGTTaGAGAGGTTCCAGTCATGGTCGGTCAGCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: VHNGSAPPGGSC*RGSSHGRSAGL
Trigger: CAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGGAGCTGATCCATTATGTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp GTTATTTTCTCGAAGGATGATGGTGGCTGCCCGAGGTaGGTCGTTCACCAGAGCCAGCTGTCCAAAGTCATC +
Preference number: 3 (lower is better)
Translates to: VIFSKDDGGCPR*VVHQSQLSKVI
Trigger: GATGACTTTGGACAGCTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACCATCATCCTTCGAGAAAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp AAAGTGACAGTTATTTTCTCGAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCACCAGAGCCAGCTGTCC +
Preference number: 3 (lower is better)
Translates to: KVTVIFSKDDGG*PRCVVHQSQLS
Trigger: GGACAGCTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACCATCATCCTTCGAGAAAATAACTGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp ACAGCCATTTTCCAACCTGTGGTGTCGCCGTCTCTCTaGATACTGTTCCCTCAGCAAGTTGCTAAGTCGGGC +
Preference number: 3 (lower is better)
Translates to: TAIFQPVVSPSL*ILFPQQVAKSG
Trigger: GCCCGACTTAGCAACTTGCTGAGGGAACAGTATCCAGAGAGACGGCGACACCACAGGTTGGAAAATGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR TCA 72 bp GCATCTCGGTCCTGGAAGGTCCAGTCATGTTTTACATaGCAAAGGGCACCCTCATCCAGCAACACTTGGCAG +
Preference number: 3 (lower is better)
Translates to: ASRSWKVQSCFT*QRAPSSSNTWQ
Trigger: CTGCCAAGTGTTGCTGGATGAGGGTGCCCTTTGTCATGTAAAACATGACTGGACCTTCCAGGACCGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CCA 72 bp TTGATGAGGTTCTCTACCAGTGTGTGGTTCCCCTCATaGATGAAGGTCACGTCTTTGAGCAGCAGGGGCATG +
Preference number: 3 (lower is better)
Translates to: LMRFSTSVWFPS*MKVTSLSSRGM
Trigger: CATGCCCCTGCTGCTCAAAGACGTGACCTTCATCCATGAGGGGAACCACACACTGGTAGAGAACCTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR-3UTR CAA 90 bp GCCACCGCCTTGATATGCAGCAGCTCTTCAAAGATCAGGTCCAGTTCTTCATCCAGGGAACCTGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: ATALICSSSSKIRSSSSSREPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACAGGTTCCCT...GGATGAAGAACTGGACCTGATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR-3UTR CAA 90 bp TTTGCCGTGTTCTTCCAGTCTCATGGTTTTTGCTTCCACATCCTTGATGATGCGGTGGTCACCAGCCCCTaGCCATGGGTCACCACATTG +
Preference number: 3 (lower is better)
Translates to: FAVFFQSHGFCFHILDDAVVTSP*PWVTTL
Trigger: CAATGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...CGCATCATCAAGGATGTGGAAGCAAAAACCATGAGACTGGAAGAACACGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp CTGGATGGTACAGCTGCACGTACAGTCGTACAGACTTaGAAACATGCAGATGTACAGACGTGCAGATGCGCA +
Preference number: 3 (lower is better)
Translates to: LDGTAARTVVQT*KHADVQTCRCA
Trigger: TGCGCATCTGCACGTCTGTACATCTGCATGTTTGCAAGTCTGTACGACTGTACGTGCAGCTGTACCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR GCA 72 bp CCAAACATGACCGCAAAGAAAGAGTTGAGGTTCTTCTaGTCCTTGAGGTGGGCTGCCAGCTTGATGAACTTC +
Preference number: 3 (lower is better)
Translates to: PNMTAKKELRFF*SLRWAASLMNF
Trigger: GAAGTTCATCAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGTCATGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp TTCACCGAGTTAGAAAGGTGTGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATCAGGTCCAGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: FTELERCATALI*SSSSKIRSSSS
Trigger: TGAAGAACTGGACCTGATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCTTTCTAACTCGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR GCA 72 bp GACCACTTTGCCGTGTTCTTCCAGTCTCATGGTTTTTaGTTCCACATCCTTGATGATGCGGTTGAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: DHFAVFFQSHGF*FHILDDAVEVL
Trigger: CAGGACTTCAACCGCATCATCAAGGATGTGGAAGCAAAAACCATGAGACTGGAAGAACACGGCAAAGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR GCA 72 bp CACCCTGAGAGGTTCTCTCCAGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCATGGTTTTTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: HPERFSPELRPL*RVLPVSWFLLP
Trigger: TGGAAGCAAAAACCATGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTCTGGAGAGAACCTCTCAGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp ATCTTCTCAAAGTTGATGAGGTTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAGGTCACGTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: IFSKLMRFSTSV*FPSWMKVTSLS
Trigger: GCTCAAAGACGTGACCTTCATCCATGAGGGGAACCACACACTGGTAGAGAACCTCATCAACTTTGAGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CCA 72 bp CAGGCGGTAGAACACACACGTATCTTTGTTAATTTATaGAAACAATACAACTCCTCTGAGACCACCGCTCTA +
Preference number: 3 (lower is better)
Translates to: QAVEHTRIFVNL*KQYNSSETTAL
Trigger: TAGAGCGGTGGTCTCAGAGGAGTTGTATTGTTTCCATAAATTAACAAAGATACGTGTGTGTTCTACCGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR GCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGGGAGACCTCCCACCTaGGGTGCCCCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPGRPPT*GAPTAG
Trigger: TCCAGCTGTGGGGGCACCGCAGGTGGGAGGTCTCCC...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS-3UTR CCA 90 bp AGAGTGCCTGCTCCAGCCAGTCCTTCCTCATGGTTCCAGCTCCCGGGAGAGGCGGGCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RVPAPASPSSWFQLPGEAGQRSP*MQLGRR
Trigger: CCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGCC...CGCCTCTCCCGGGAGCTGGAACCATGAGGAAGGACTGGCTGGAGCAGGCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR GCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGGGTGGCTGCCCGAGGTaGGTCGTTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWGGCPR*VVHQSQ
Trigger: CTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACC...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGGTCCCTGGATGCAGCTaGGGCGCCGGTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWVPGCS*GAGART
Trigger: TGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGAC...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTATACCGGTTCCTGCCTaGGGTCGGGGGACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVAIPVPA*GRGTGR
Trigger: CCTTCCCGTCCCCCGACCCCAGGCAGGAACCGGTAT...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAATACCGGTTCCTGCCTaGGGTCGGGGGACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPIPVPA*GRGTGR
Trigger: CCTTCCCGTCCCCCGACCCCAGGCAGGAACCGGTAT...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVASPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGACAGCTGGGCCCACCTaGCAGTGGTTCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWTAGPT*QWFSPG
Trigger: GCCAGGTGAGAACCACTGGCAGGTGGGCCCAGCTGT...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS-3UTR GCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTACAGCTGGGCCCACCTaGCAGTGGTTCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVATAGPT*QWFSPG
Trigger: GCCAGGTGAGAACCACTGGCAGGTGGGCCCAGCTGT...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS-3UTR GCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGGTGGCCACCCAGTACTaGAGCTCGTTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWVATQY*SSLKRR
Trigger: GCGCCGCTTCAACGAGCTGCAGTACTGGGTGGCCAC...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTTGGCTGGACTCCGGGTaGTCAGGGACTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVAWLDSG*SGTAQN
Trigger: GTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTGTCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCVQRSP*MQLGRR
Trigger: CCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGAC...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCATCTGCTGGCTCCACGTaGAAGTGGTGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPSAGST*KWCRRA
Trigger: TGCCCTCCTGCACCACTTCCACGTGGAGCCAGCAGA...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTGGGAGACCTCCCACCTaGGGTGCCCCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCGRPPT*GAPTAG
Trigger: TCCAGCTGTGGGGGCACCGCAGGTGGGAGGTCTCCC...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGCCGTATACCGGTTCCTaGCTGGGGTCGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQPYTGS*LGSGDG
Trigger: CCCGTCCCCCGACCCCAGGCAGGAACCGGTATACGG...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCGTATACCGGTTCCTaGCTGGGGTCGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYPYTGS*LGSGDG
Trigger: CCCGTCCCCCGACCCCAGGCAGGAACCGGTATACGG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGGTCGGTCAGCTGGCCTaGCAGGTCCTTGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEVGQLA*QVLGAH
Trigger: GTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGAC...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCAAGTGCCTGGGACAACACTGGAGCCCATCTGAGCAACCGCTAGCCTCCCTGCGGTGCCCCCACAGCTaGACTCTCCACCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKCLGQHWSPSEQPLASLRCPHS*TLHHSW
Trigger: CCAGCTGTGGTGGAGAGTCCAGCTGTGGGGGCACCG...CAGGGAGGCTAGCGGTTGCTCAGATGGGCTCCAGTGTTGTCCCAGGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGTTTCTGGAGGAAGCTaGTGGCCACGGGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVAVSGGS*WPRDPS
Trigger: ACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAAC...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCACCAACACCTGTCCCTTaGTCCAGTGGTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPPTPVP*SSGPHG
Trigger: CCCATGAGGACCACTGGACCAAGGGACAGGTGTTGG...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPKRFQS*SVSWPA
Trigger: GGCAGGCCAGCTGACCGACCATGACTGGAACCTCTT...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVAPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACACCTCCCACCTGCGGTaGCCCCACAGCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYTSHLR*PHSWTL
Trigger: GAGAGTCCAGCTGTGGGGGCACCGCAGGTGGGAGGT...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCACCGTATACCGGTTCCTaGCTGGGGTCGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASPYTGS*LGSGDG
Trigger: CCCGTCCCCCGACCCCAGGCAGGAACCGGTATACGG...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTTGTTGCAGATGTAGGTaGTGTGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVACCRCR*CAPARC
Trigger: GCAGCGAGCAGGAGCACAGCACCTACATCTGCAACA...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGTGTGGGGTCAGCTCATaGACTTCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWCGVSS*TSCGST
Trigger: TGTCGACCCACAGGAAGTGCATGAGCTGACCCCACA...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCGTCGGTCAGCTGGCCTaGCAGGTCCTTGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSVGQLA*QVLGAH
Trigger: GTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGAC...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGTCGGTCAGCTGGCCTaGCAGGTCCTTGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHVGQLA*QVLGAH
Trigger: GTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGTCCCTGGATGCAGCTaGGGCGCCGGTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHVPGCS*GAGART
Trigger: TGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGTGACATCCCGCAGGTGCTGGGGGCCCAGTACATAATGGATCAGCTCCACCTGGTCCCTGGATGCAGCTaGGGCGCCGGTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: GDIPQVLGAQYIMDQLHLVPGCS*GAGART
Trigger: TGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGAC...CAGGTGGAGCTGATCCATTATGTACTGGGCCCCCAGCACCTGCGGGATGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR CCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCGTCCCTGGATGCAGCTaGGGCGCCGGTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTVPGCS*GAGART
Trigger: TGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGAC...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAGCTTGGCTCCGTGAGTaGACCCCAAGCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTAWLRE*TPSPRA
Trigger: GGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGC...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTGCTTGGCTCCGTGAGTaGACCCCAAGCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCAWLRE*TPSPRA
Trigger: GGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGC...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTATACCGGTTCCTGCCTaGGGTCGGGGGACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCIPVPA*GRGTGR
Trigger: CCTTCCCGTCCCCCGACCCCAGGCAGGAACCGGTAT...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWRSESF*RKLVAT
Trigger: CGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTCGGGACAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVARDSSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCG...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTTCTGCTCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AHSRALSPLCGEPCPAVASAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGAGCAGA...AGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACCAAAGAGCCGCTCGTTaGGCCCCAGGGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHQRAAR*APGMWP
Trigger: TGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCAAAGAGCCGCTCGTTaGGCCCCAGGGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSQRAAR*APGMWP
Trigger: TGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAGGGACACTCGGCTTCTaGGTGGTGATAGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTGTLGF*VVIEAR
Trigger: CCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCC...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGGGGACACTCGGCTTCTaGGTGGTGATAGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQGTLGF*VVIEAR
Trigger: CCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCC...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TTCTCGAAGGATGATGGTGGCTGCCCGAGGTGCGTCGTTCACCAGAGCCAGCTGACAGCTGGGCCCACCTaGCAGTGGTTCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: FSKDDGGCPRCVVHQSQLTAGPT*QWFSPG
Trigger: GCCAGGTGAGAACCACTGGCAGGTGGGCCCAGCTGT...CAGCTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACCATCATCCTTCGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR GCA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCGGTGGCTGCCCGAGGTaGGTCGTTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPGGCPR*VVHQSQ
Trigger: CTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACC...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR GCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGGTGGCTGCCCGAGGTaGGTCGTTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPGGCPR*VVHQSQ
Trigger: CTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGTCGGTCAGCTGGCCTaGCAGGTCCTTGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMVGQLA*QVLGAH
Trigger: GTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGAC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGTGGCCACCCAGTACTaGAGCTCGTTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHVATQY*SSLKRR
Trigger: GCGCCGCTTCAACGAGCTGCAGTACTGGGTGGCCAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAGTGGCCACCCAGTACTaGAGCTCGTTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTVATQY*SSLKRR
Trigger: GCGCCGCTTCAACGAGCTGCAGTACTGGGTGGCCAC...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCTCGCTGGGACAGGAGGGCCATAGCCTCAACAAGCTCCTCTTCCACATCTTGGTCCCTGGATGCAGCTaGGGCGCCGGTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: PSLGQEGHSLNKLLFHILVPGCS*GAGART
Trigger: TGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGAC...CAAGATGTGGAAGAGGAGCTTGTTGAGGCTATGGCCCTCCTGTCCCAGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR CCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDVQRSP*MQLGRR
Trigger: CCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGAC...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGCTTGGCTCCGTGAGTaGACCCCAAGCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPAWLRE*TPSPRA
Trigger: GGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGGCCTGCCAGGTCCTTaGCGCTCACTAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHGLPGP*RSLGPA
Trigger: TGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACGGCCTGCCAGGTCCTTaGCGCTCACTAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYGLPGP*RSLGPA
Trigger: TGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCC...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCTGGGGTGCCAGACATaGCCGTATACCGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTLGCQT*PYTGSC
Trigger: GCAGGAACCGGTATACGGTCATGTCTGGCACCCCAG...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACCTGGGGTGCCAGACATaGCCGTATACCGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHLGCQT*PYTGSC
Trigger: GCAGGAACCGGTATACGGTCATGTCTGGCACCCCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCTGGGGTGCCAGACATaGCCGTATACCGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYLGCQT*PYTGSC
Trigger: GCAGGAACCGGTATACGGTCATGTCTGGCACCCCAG...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCAAAGAGCCGCTCGTTaGGCCCCAGGGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRAQRAAR*APGMWP
Trigger: TGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTG...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGGGACACTCGGCTTCTaGGTGGTGATAGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPGTLGF*VVIEAR
Trigger: CCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTAGGGACACTCGGCTTCTaGGTGGTGATAGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLGTLGF*VVIEAR
Trigger: CCGCGCCTCTATCACCACTCAGAAGCCGAGTGTCCC...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCATGAAGACACTGTGGGTCAGCAGGAAGTCACTGAGGAACGTCTCTGTTGGGGGGAGACCTCCCACCTaGGGTGCCCCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GMKTLWVSRKSLRNVSVGGRPPT*GAPTAG
Trigger: TCCAGCTGTGGGGGCACCGCAGGTGGGAGGTCTCCC...CCCAACAGAGACGTTCCTCAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR GCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGCCTGCCTTGTGCACATaGTCTGTGGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQPALCT*SVVACS
Trigger: GGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGG...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEKDDGG*PRCVVH
Trigger: GTGAACGACGCACCTCGGGCAGCCACCATCATCCTT...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCATGAAGACACTGTGGGTCAGCAGGAAGTCACTGAGGAACGTCTCTGTTGGGCCGTATACCGGTTCCTaGCTGGGGTCGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GMKTLWVSRKSLRNVSVGPYTGS*LGSGDG
Trigger: CCCGTCCCCCGACCCCAGGCAGGAACCGGTATACGG...CCCAACAGAGACGTTCCTCAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134371.4
CDS-3UTR GCA 90 bp CCCAAGTGCCTGGGACAACACTGGAGCCCATCTGAGCAACCGCTAGCCTCCCTGTCCACGTGGAAGTGGTaGAGGAGGGCAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PKCLGQHWSPSEQPLASLSTWKW*RRAVKS
Trigger: GCTCTTCACTGCCCTCCTGCACCACTTCCACGTGGA...CAGGGAGGCTAGCGGTTGCTCAGATGGGCTCCAGTGTTGTCCCAGGCACTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR GCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCTGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGCAPAR*LQQGLL
Trigger: CAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACA...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCATGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPCAPAR*LQQGLL
Trigger: CAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACA...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGGCATCTGGCTaGAAGCCAACGACATCACCG +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYPRASG*KPTTSP
Trigger: CGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCCACGGGCATCTGGCTaGAAGCCAACGACATCACCG +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTPRASG*KPTTSP
Trigger: CGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGG...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTCCACGGGCATCTGGCTaGAAGCCAACGACATCACCG +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCPRASG*KPTTSP
Trigger: CGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGG...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTGGCTGGACTCCGGGTaGTCAGGGACTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSWLDSG*SGTAQN
Trigger: GTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACTGGCTGGACTCCGGGTaGTCAGGGACTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYWLDSG*SGTAQN
Trigger: GTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAACTCTCCACCACAGCTaGGCCCACCTGCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTTLHHS*AHLPVV
Trigger: AACCACTGGCAGGTGGGCCCAGCTGTGGTGGAGAGT...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GGTGACATCCCGCAGGTGCTGGGGGCCCAGTACATAATGGATCAGCTCCACCTGACTCTCCACCACAGCTaGGCCCACCTGCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GDIPQVLGAQYIMDQLHLTLHHS*AHLPVV
Trigger: AACCACTGGCAGGTGGGCCCAGCTGTGGTGGAGAGT...CAGGTGGAGCTGATCCATTATGTACTGGGCCCCCAGCACCTGCGGGATGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR CCA 90 bp TCCTCTGAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCGCTTGGCTCCGTGAGTaGACCCCAAGCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSETTALGNSPAYTQLFIAWLRE*TPSPRA
Trigger: GGCTCTGGGGCTTGGGGTCCACTCACGGAGCCAAGC...GATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCTCCCTCGTGCAACGTaGTCACCAGCCCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYLPRAT*SPAPCH
Trigger: ATGGCAAGGGGCTGGTGACCACGTTGCACGAGGGAG...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCTCCCTCGTGCAACGTaGTCACCAGCCCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSLPRAT*SPAPCH
Trigger: ATGGCAAGGGGCTGGTGACCACGTTGCACGAGGGAG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGTCAGCAGGAAGTCACTGAGGAACGTCTCTGTTGGGCAGGGTTAGGGTTGGGAATACCGGTTCCTGCCTaGGGTCGGGGGACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQQEVTEERLCWAGLGLGIPVPA*GRGTGR
Trigger: CCTTCCCGTCCCCCGACCCCAGGCAGGAACCGGTAT...TCCCAACCCTAACCCTGCCCAACAGAGACGTTCCTCAGTGACTTCCTGCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134371.4
CDS-3UTR CCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGAGGAACGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPEERLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACGTTCCTC...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGGAGGAACGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWEERLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACGTTCCTC...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCGGCTCCACGTGGAAGTaGTGCAGGAGGGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSGSTWK*CRRAVK
Trigger: CTTCACTGCCCTCCTGCACCACTTCCACGTGGAGCC...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGTCTGCTGGCTCCACGTaGAAGTGGTGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQSAGST*KWCRRA
Trigger: TGCCCTCCTGCACCACTTCCACGTGGAGCCAGCAGA...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTCTGCTGGCTCCACGTaGAAGTGGTGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYSAGST*KWCRRA
Trigger: TGCCCTCCTGCACCACTTCCACGTGGAGCCAGCAGA...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCATCATGGTCGGTCAGCTaGCCTGCCAGGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASSWSVS*PARSLA
Trigger: CGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGA...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTTCATGGTCGGTCAGCTaGCCTGCCAGGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRASWSVS*PARSLA
Trigger: CGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGA...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGATCAGCTCCACCTGGTaGATCCTGTTGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWISSTW*ILLKRF
Trigger: GAACCTCTTCAACAGGATCCACCAGGTGGAGCTGAT...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR CAA 72 bp TGCACTTCCTGTGGGTCGACAACAAAGAGCCGCTCGTaGAGCCCCAGGGATGTGGCCACACCACGGGCATCT +
Preference number: 4 (lower is better)
Translates to: CTSCGSTTKSRS*SPRDVATPRAS
Trigger: AGATGCCCGTGGTGTGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTGTTGTCGACCCACAGGAAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR TCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCCTTGTCCCCCTGGCTaGACAACACAGTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSPCPPG*TTQFLP
Trigger: AGGCAGGAACTGTGTTGTTCAGCCAGGGGGACAAGG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACCTTGTCCCCCTGGCTaGACAACACAGTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTPCPPG*TTQFLP
Trigger: AGGCAGGAACTGTGTTGTTCAGCCAGGGGGACAAGG...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACAACTTCCTGAGTAGCTaGGCCCGGGAGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYNFLSS*AREPGT
Trigger: TGTTCCTGGCTCCCGGGCTCAGCTACTCAGGAAGTT...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACAACTTCCTGAGTAGCTaGGCCCGGGAGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYNFLSS*AREPGT
Trigger: TGTTCCTGGCTCCCGGGCTCAGCTACTCAGGAAGTT...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCGAGGGGAGAGCTTGGTaGGAGCCAATCGGTACACTC +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSEGRAW*EPIGTL
Trigger: GAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTC...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACACACGTGGAGATCCTTaGTCCCTGGCTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYTRGDP*SLAVLV
Trigger: CACGAGGACAGCCAGGGATCAAGGATCTCCACGTGT...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGGGGAGACCTCCCACCTaGGGTGCCCCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVGRPPT*GAPTAG
Trigger: TCCAGCTGTGGGGGCACCGCAGGTGGGAGGTCTCCC...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCACCTGCCTTGTGCACATaGTCTGTGGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASPALCT*SVVACS
Trigger: GGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGG...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTGCCAAGAGATGGCGGTaGAGGAGCTTCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRAAKRWR*RSFPAL
Trigger: CAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGC...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACAAGTCATCTCCCTCGTaGAACGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHKSSPS*NVVTSP
Trigger: GGGGCTGGTGACCACGTTGCACGAGGGAGATGACTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGGTGGCTGCCCGAGGTaGGTCGTTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKGGCPR*VVHQSQ
Trigger: CTGGCTCTGGTGAACGACGCACCTCGGGCAGCCACC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSKDDGG*PRCVVH
Trigger: GTGAACGACGCACCTCGGGCAGCCACCATCATCCTT...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHKDDGG*PRCVVH
Trigger: GTGAACGACGCACCTCGGGCAGCCACCATCATCCTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGTCCACGTGGAAGTGGTaGAGGAGGGCAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQSTWKW*RRAVKS
Trigger: GCTCTTCACTGCCCTCCTGCACCACTTCCACGTGGA...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCTCCACGTGGAAGTGGTaGAGGAGGGCAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLSTWKW*RRAVKS
Trigger: GCTCTTCACTGCCCTCCTGCACCACTTCCACGTGGA...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACAGGGAGCCAAACAGGTaGATTCCGGGCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHREPNR*IPGLGL
Trigger: CAGACCAAGGCCCGGAATGCACCTGTTTGGCTCCCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGGGAGCCAAACAGGTaGATTCCGGGCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQREPNR*IPGLGL
Trigger: CAGACCAAGGCCCGGAATGCACCTGTTTGGCTCCCT...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAAGGGAGCCAAACAGGTaGATTCCGGGCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTREPNR*IPGLGL
Trigger: CAGACCAAGGCCCGGAATGCACCTGTTTGGCTCCCT...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACCACGGGCATCTGGCTaGAAGCCAACGACATCACCG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPPRASG*KPTTSP
Trigger: CGGTGATGTCGTTGGCTTGCAGCCAGATGCCCGTGG...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCATGGCTGGACTCCGGGTaGTCAGGGACTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPWLDSG*SGTAQN
Trigger: GTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGGTCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKVQRSP*MQLGRR
Trigger: CCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGAC...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAGTCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: LGNSPAYTQLFISDVWREVQRSP*MQLGRR
Trigger: CCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGAC...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCTCGCTGTTGGTAAGTaGTGTCCAGCGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSLAVGK*CPAESL
Trigger: CAGGGACTCCGCTGGACACCACTTACCAACAGCGAG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGCTCGCTGTTGGTAAGTaGTGTCCAGCGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQLAVGK*CPAESL
Trigger: CAGGGACTCCGCTGGACACCACTTACCAACAGCGAG...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGGCTCCACGTGGAAGTaGTGCAGGAGGGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMGSTWK*CRRAVK
Trigger: CTTCACTGCCCTCCTGCACCACTTCCACGTGGAGCC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCGTTTCTGGAGGAAGCTaGTGGCCACGGGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTVSGGS*WPRDPS
Trigger: ACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAAC...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGGTTTCTGGAGGAAGCTaGTGGCCACGGGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQVSGGS*WPRDPS
Trigger: ACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAAC...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEVQWSS*AKAAIT
Trigger: AGTGATGGCAGCTTTGGCCCATGAGGACCACTGGAC...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCACACCACGGGCATCTaGCTGCAAGCCAACGACATC +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYHTTGI*LQANDI
Trigger: GATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTG...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACCACGGGCATCTaGCTGCAAGCCAACGACATC +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTHTTGI*LQANDI
Trigger: GATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTG...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCAGCTGCTCAGGGTGTaGGGTCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYQLLRV*GQLMHF
Trigger: GAAGTGCATGAGCTGACCCCACACCCTGAGCAGCTG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCTCTGAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCGGCCTGCCAGGTCCTTaGCGCTCACTAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSETTALGNSPAYTQLFIGLPGP*RSLGPA
Trigger: TGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCC...GATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQKRFQS*SVSWPA
Trigger: GGCAGGCCAGCTGACCGACCATGACTGGAACCTCTT...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCAAGTGCCTGGGACAACACTGGAGCCCATCTGAGCAACCGCTAGCCTCCCTGCTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKCLGQHWSPSEQPLASLLSSWM*DTRLLS
Trigger: ACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAG...CAGGGAGGCTAGCGGTTGCTCAGATGGGCTCCAGTGTTGTCCCAGGCACTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGAGGTGCTCCTGCACCTaGTGGATCCTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPERCSCT*WILLKR
Trigger: CCTCTTCAACAGGATCCACCAGGTGCAGGAGCACCT...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129223.9
3UTR CAA 72 bp TTCCAGTCATGGTCGGTCAGCTGGCCTGCCAGGTCCTaGGCGCTCACTAGGTCCAGCATCTCAGAAGAACCC +
Preference number: 4 (lower is better)
Translates to: FQSWSVSWPARS*ALTRSSISEEP
Trigger: GGGTTCTTCTGAGATGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 72 bp GGGTGCTCAGGGACTGCTCAGAACACGTGGAGATCCTaGATCCCTGGCTGTCCTCGTGGATGTGGGACACTC +
Preference number: 4 (lower is better)
Translates to: GCSGTAQNTWRS*IPGCPRGCGTL
Trigger: GAGTGTCCCACATCCACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGTCCCTGAGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR TCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACTCCTCTTCCACATCTTaGGTTCCTGTAGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHSSSTS*VPVGSG
Trigger: GCCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGTCCTCTTCCACATCTTaGGTTCCTGTAGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQSSSTS*VPVGSG
Trigger: GCCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGA...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGGGTGTGCCACCGCCTTaGTATGCAGCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQGVPPP*YAAALQ
Trigger: TTGAAGAGCTGCTGCATATCAAGGCGGTGGCACACC...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCTTGTCCCCCTGGCTaGACAACACAGTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLPCPPG*TTQFLP
Trigger: AGGCAGGAACTGTGTTGTTCAGCCAGGGGGACAAGG...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCGTCTCTGTTGGGTCATaGGCACTGGAATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTVSVGS*ALESGL
Trigger: GAGACCGGATTCCAGTGCTCATGACCCAACAGAGAC...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCTGCTCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPESAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGAGCAGA...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGAACTTCCTGAGTAGCTaGGCCCGGGAGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMNFLSS*AREPGT
Trigger: TGTTCCTGGCTCCCGGGCTCAGCTACTCAGGAAGTT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAAACTTCCTGAGTAGCTaGGCCCGGGAGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPNFLSS*AREPGT
Trigger: TGTTCCTGGCTCCCGGGCTCAGCTACTCAGGAAGTT...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTAGAGGGGAGAGCTTGGTaGGAGCCAATCGGTACACTC +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLEGRAW*EPIGTL
Trigger: GAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTC...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGAGGGGAGAGCTTGGTaGGAGCCAATCGGTACACTC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMEGRAW*EPIGTL
Trigger: GAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTACACGTGGAGATCCTTaGTCCCTGGCTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRATRGDP*SLAVLV
Trigger: CACGAGGACAGCCAGGGATCAAGGATCTCCACGTGT...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCAGCTTCCCTGCCTTGTaGACATGCTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGSFPAL*TCSVVA
Trigger: GGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCT...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAAGCTTCCCTGCCTTGTaGACATGCTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASSFPAL*TCSVVA
Trigger: GGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCT...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTAAGTCATCTCCCTCGTaGAACGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRAKSSPS*NVVTSP
Trigger: GGGGCTGGTGACCACGTTGCACGAGGGAGATGACTT...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGAAGTCATCTCCCTCGTaGAACGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMKSSPS*NVVTSP
Trigger: GGGGCTGGTGACCACGTTGCACGAGGGAGATGACTT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPELRPL*RVLPVS
Trigger: TGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTC...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGCCGTATACCGGTTCCTaGCTGGGGTCGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKPYTGS*LGSGDG
Trigger: CCCGTCCCCCGACCCCAGGCAGGAACCGGTATACGG...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTTCCACGTGGAAGTGGTaGAGGAGGGCAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRASTWKW*RRAVKS
Trigger: GCTCTTCACTGCCCTCCTGCACCACTTCCACGTGGA...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGTTGCAGATGTAGGTaGTGTGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYCCRCR*CAPARC
Trigger: GCAGCGAGCAGGAGCACAGCACCTACATCTGCAACA...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACATGTTGCAGATGTAGGTaGTGTGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTCCRCR*CAPARC
Trigger: GCAGCGAGCAGGAGCACAGCACCTACATCTGCAACA...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTGTTGCAGATGTAGGTaGTGTGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSCCRCR*CAPARC
Trigger: GCAGCGAGCAGGAGCACAGCACCTACATCTGCAACA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAAGGGAGCCAAACAGGTaGATTCCGGGCCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPREPNR*IPGLGL
Trigger: CAGACCAAGGCCCGGAATGCACCTGTTTGGCTCCCT...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTTGTGGGGTCAGCTCATaGACTTCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCCGVSS*TSCGST
Trigger: TGTCGACCCACAGGAAGTGCATGAGCTGACCCCACA...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACATGTGGGGTCAGCTCATaGACTTCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTCGVSS*TSCGST
Trigger: TGTCGACCCACAGGAAGTGCATGAGCTGACCCCACA...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGTGGCCACCCAGTACTaGAGCTCGTTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKVATQY*SSLKRR
Trigger: GCGCCGCTTCAACGAGCTGCAGTACTGGGTGGCCAC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACTCGCTGTTGGTAAGTaGTGTCCAGCGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPLAVGK*CPAESL
Trigger: CAGGGACTCCGCTGGACACCACTTACCAACAGCGAG...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCACATGCTCTGTGGTaGCCTGCTCCAGACTCACTC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMAHALW*PAPDSL
Trigger: GAGTGAGTCTGGAGCAGGCCACCACAGAGCATGTGC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp AGTTCCTGTAGGCTCGGGCTCCGGTCCAGGGAACCTGTAGAATTGGGCATCTCGGCACATGCTCTGTGGTaGCCTGCTCCAGACTCACTC +
Preference number: 4 (lower is better)
Translates to: SSCRLGLRSREPVELGISAHALW*PAPDSL
Trigger: GAGTGAGTCTGGAGCAGGCCACCACAGAGCATGTGC...CGAGATGCCCAATTCTACAGGTTCCCTGGACCGGAGCCCGAGCCTACAGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR CCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGATACCGGTTCCTGCCTaGGGTCGGGGGACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVIPVPA*GRGTGR
Trigger: CCTTCCCGTCCCCCGACCCCAGGCAGGAACCGGTAT...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCAGGGCAGTGAAGAGCTaGGTGCTGGGCATGAAGACA +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTRAVKS*VLGMKT
Trigger: TGTCTTCATGCCCAGCACCCAGCTCTTCACTGCCCT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSRSESF*RKLVAT
Trigger: CGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQRSESF*RKLVAT
Trigger: CGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTTGTCCCTTGGTCCAGTaGTCCTCATGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCCPLVQ*SSWAKA
Trigger: AGCTTTGGCCCATGAGGACCACTGGACCAAGGGACA...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTGTCCCTTGGTCCAGTaGTCCTCATGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSCPLVQ*SSWAKA
Trigger: AGCTTTGGCCCATGAGGACCACTGGACCAAGGGACA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCCAACACCTGTCCCTTaGTCCAGTGGTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRAPTPVP*SSGPHG
Trigger: CCCATGAGGACCACTGGACCAAGGGACAGGTGTTGG...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCACACCACGGGCATCTaGCTGCAAGCCAACGACATC +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGHTTGI*LQANDI
Trigger: GATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTG...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGCAGCTGCTCAGGGTGTaGGGTCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMQLLRV*GQLMHF
Trigger: GAAGTGCATGAGCTGACCCCACACCCTGAGCAGCTG...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGGCCTGCCAGGTCCTTaGCGCTCACTAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKGLPGP*RSLGPA
Trigger: TGCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAATCATGGTCGGTCAGCTaGCCTGCCAGGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKSWSVS*PARSLA
Trigger: CGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGA...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASKRFQS*SVSWPA
Trigger: GGCAGGCCAGCTGACCGACCATGACTGGAACCTCTT...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCAGAGACAGAGCTCTGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTRDRAL*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACAGAGCTCTGTCTCT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSLSSWM*DTRLLS
Trigger: ACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACGGGACAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTRDSSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCG...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCATCCTCTTCCACATCTTaGGTTCCTGTAGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPSSSTS*VPVGSG
Trigger: GCCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGA...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGTCTCTGTTGGGTCATaGGCACTGGAATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMVSVGS*ALESGL
Trigger: GAGACCGGATTCCAGTGCTCATGACCCAACAGAGAC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGCAAAGAGCCGCTCGTTaGGCCCCAGGGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVQRAAR*APGMWP
Trigger: TGGCCACATCCCTGGGGCTCAACGAGCGGCTCTTTG...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp TCCTCTGAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCACACGTGGAGATCCTTaGTCCCTGGCTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: SSETTALGNSPAYTQLFITRGDP*SLAVLV
Trigger: CACGAGGACAGCCAGGGATCAAGGATCTCCACGTGT...GATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR TCA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRAPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCACCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGCTCTGTGGTGGCCTaGTCCAGACTCACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYCSVVA*SRLTLK
Trigger: TTTCAGAGTGAGTCTGGAGCAGGCCACCACAGAGCA...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTTGCTCTGTGGTGGCCTaGTCCAGACTCACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCCSVVA*SRLTLK
Trigger: TTTCAGAGTGAGTCTGGAGCAGGCCACCACAGAGCA...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGCCAAGAGATGGCGGTaGAGGAGCTTCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKAKRWR*RSFPAL
Trigger: CAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGTGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVCAPAR*LQQGLL
Trigger: CAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACA...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCTGCTGCCTCTTGTTaGAGATGTAGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPESAASC*RCRCCA
Trigger: AGCACAGCACCTACATCTGCAACAAGAGGCAGCAGA...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCACTAGCCGCAGGATCTaGTGCCTCTTGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTTSRRI*CLLLQM
Trigger: CATCTGCAACAAGAGGCAGCAGATCCTGCGGCTAGT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGA +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYLMGQS*HHFSHR
Trigger: TCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAG...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTATGTGGGGTCAGCTCATaGACTTCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLCGVSS*TSCGST
Trigger: TGTCGACCCACAGGAAGTGCATGAGCTGACCCCACA...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGGTCCCTGGATGCAGCTaGGGCGCCGGTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKVPGCS*GAGART
Trigger: TGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGAC...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GAAGGTCCAGTCATGTTTTACATGACAAAGGGCACCCTCATCCAGCAACACTTGGTCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: EGPVMFYMTKGTLIQQHLVQRSP*MQLGRR
Trigger: CCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGAC...CAAGTGTTGCTGGATGAGGGTGCCCTTTGTCATGTAAAACATGACTGGACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTGTACCCTTGTCCCCCTaGCTGAACAACACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCVPLSP*LNNTVP
Trigger: AGGAACTGTGTTGTTCAGCCAGGGGGACAAGGGTAC...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAGTACCCTTGTCCCCCTaGCTGAACAACACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTVPLSP*LNNTVP
Trigger: AGGAACTGTGTTGTTCAGCCAGGGGGACAAGGGTAC...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASRSESF*RKLVAT
Trigger: CGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMVQWSS*AKAAIT
Trigger: AGTGATGGCAGCTTTGGCCCATGAGGACCACTGGAC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCTGTCCCTTGGTCCAGTaGTCCTCATGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGCPLVQ*SSWAKA
Trigger: AGCTTTGGCCCATGAGGACCACTGGACCAAGGGACA...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCTCATGCACTTCCTGTaGGTCGACAACAAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSLMHFL*VDNKEP
Trigger: CGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTTGGATCAGCTCCACCTaGTGGATCCTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCWISST*WILLKR
Trigger: CCTCTTCAACAGGATCCACCAGGTGGAGCTGATCCA...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTGGATCAGCTCCACCTaGTGGATCCTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSWISST*WILLKR
Trigger: CCTCTTCAACAGGATCCACCAGGTGGAGCTGATCCA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGAGAGACAGAGCTCTGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMRDRAL*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACAGAGCTCTGTCTCT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCACTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASLSSWM*DTRLLS
Trigger: ACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAG...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCACTGCTCAGAACACGTaGAGATCCTTGATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSTAQNT*RSLIPG
Trigger: GCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGT...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCACTGCTCAGAACACGTaGAGATCCTTGATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTTAQNT*RSLIPG
Trigger: GCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
3UTR CAA 72 bp GAGGGCCATAGCCTCAACAAGCTCCTCTTCCACATCTaGAGTTCCTGTAGGCTCGGGCTCCGGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EGHSLNKLLFHI*SSCRLGLRSRE
Trigger: TTCCCTGGACCGGAGCCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGAGCTTGTTGAGGCTATGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR TCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCATATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASYFLEG*WWLPEV
Trigger: CACCTCGGGCAGCCACCATCATCCTTCGAGAAAATA...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CTGGGCATGAAGACACTGTGGGTCAGCAGGAAGTCACTGAGGAACGTCTCTGTTCTGGGGTGCCAGACATaGCCGTATACCGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGMKTLWVSRKSLRNVSVLGCQT*PYTGSC
Trigger: GCAGGAACCGGTATACGGTCATGTCTGGCACCCCAG...AACAGAGACGTTCCTCAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134371.4
CDS-3UTR TCA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGACACGTGGAGATCCTTaGTCCCTGGCTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: TALGNSPAYTQLFISDVWTRGDP*SLAVLV
Trigger: CACGAGGACAGCCAGGGATCAAGGATCTCCACGTGT...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAACAGCTGGGCCCACCTaGCAGTGGTTCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LGNSPAYTQLFISDVWRETAGPT*QWFSPG
Trigger: GCCAGGTGAGAACCACTGGCAGGTGGGCCCAGCTGT...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp GGCCATAGCCTCAACAAGCTCCTCTTCCACATCTTGAGTTCCTGTAGGCTCGGGAGCTTCCCTGCCTTGTaGACATGCTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHSLNKLLFHILSSCRLGSFPAL*TCSVVA
Trigger: GGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCT...CCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGAGCTTGTTGAGGCTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR GCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGCCAAGAGATGGCGGTaGAGGAGCTTCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPAKRWR*RSFPAL
Trigger: CAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGC...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCGCCAAGAGATGGCGGTaGAGGAGCTTCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPAKRWR*RSFPAL
Trigger: CAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGC...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHATALI*SSSSKI
Trigger: GATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGTCTGCTGCCTCTTGTTaGAGATGTAGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: YRRADAQKARWEGSLLIQSAASC*RCRCCA
Trigger: AGCACAGCACCTACATCTGCAACAAGAGGCAGCAGA...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGACTAGCCGCAGGATCTaGTGCCTCTTGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMTSRRI*CLLLQM
Trigger: CATCTGCAACAAGAGGCAGCAGATCCTGCGGCTAGT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGGTGGCCACCCAGTACTaGAGCTCGTTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKVATQY*SSLKRR
Trigger: GCGCCGCTTCAACGAGCTGCAGTACTGGGTGGCCAC...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCACTCTCCACCACAGCTaGGCCCACCTGCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPTLHHS*AHLPVV
Trigger: AACCACTGGCAGGTGGGCCCAGCTGTGGTGGAGAGT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GGCCATAGCCTCAACAAGCTCCTCTTCCACATCTTGAGTTCCTGTAGGCTCGGGCTCGCTGTTGGTAAGTaGTGTCCAGCGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GHSLNKLLFHILSSCRLGLAVGK*CPAESL
Trigger: CAGGGACTCCGCTGGACACCACTTACCAACAGCGAG...CCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGAGCTTGTTGAGGCTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR CCA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGGGCATCTCGGTCCTaGAAGGTCCAGTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYWASRS*KVQSCF
Trigger: AAAACATGACTGGACCTTCCAGGACCGAGATGCCCA...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGTACCCTTGTCCCCCTaGCTGAACAACACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPVPLSP*LNNTVP
Trigger: AGGAACTGTGTTGTTCAGCCAGGGGGACAAGGGTAC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCCTCCCTCGTGCAACGTaGTCACCAGCCCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPLPRAT*SPAPCH
Trigger: ATGGCAAGGGGCTGGTGACCACGTTGCACGAGGGAG...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGGCATGAAGACACTGTaGGTCAGCAGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPGMKTL*VSRKSL
Trigger: CAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAGGCATGAAGACACTGTaGGTCAGCAGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASGMKTL*VSRKSL
Trigger: CAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGGCTCCACGTGGAAGTaGTGCAGGAGGGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPGSTWK*CRRAVK
Trigger: CTTCACTGCCCTCCTGCACCACTTCCACGTGGAGCC...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACCAACACCTGTCCCTTaGTCCAGTGGTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKPTPVP*SSGPHG
Trigger: CCCATGAGGACCACTGGACCAAGGGACAGGTGTTGG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATCACACCACGGGCATCTaGCTGCAAGCCAACGACATC +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDHTTGI*LQANDI
Trigger: GATGTCGTTGGCTTGCAGCCAGATGCCCGTGGTGTG...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACTCATGCACTTCCTGTaGGTCGACAACAAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPLMHFL*VDNKEP
Trigger: CGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAG...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAATCATGGTCGGTCAGCTaGCCTGCCAGGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LGNSPAYTQLFISDVWRESWSVS*PARSLA
Trigger: CGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGA...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACATCAGCTCCACCTGGTaGATCCTGTTGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHISSTW*ILLKRF
Trigger: GAACCTCTTCAACAGGATCCACCAGGTGGAGCTGAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAATCAGCTCCACCTGGTaGATCCTGTTGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTISSTW*ILLKRF
Trigger: GAACCTCTTCAACAGGATCCACCAGGTGGAGCTGAT...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCATGGATCAGCTCCACCTaGTGGATCCTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASWISST*WILLKR
Trigger: CCTCTTCAACAGGATCCACCAGGTGGAGCTGATCCA...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEFSTSV*FPSWMK
Trigger: CTTCATCCATGAGGGGAACCACACACTGGTAGAGAA...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCACTGCTCAGAACACGTaGAGATCCTTGATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGTAQNT*RSLIPG
Trigger: GCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGT...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCATGCTCCTGCACCTGGTaGATCCTGTTGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASCSCTW*ILLKRF
Trigger: GAACCTCTTCAACAGGATCCACCAGGTGCAGGAGCA...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129223.9
3UTR CAA 72 bp TGTAGGCTCGGGCTCCGGTCCAGGGAACCTGTAGAATaGGGCATCTCGGTCCTGGAAGGTCCAGTCATGTTT +
Preference number: 4 (lower is better)
Translates to: CRLGLRSREPVE*GISVLEGPVMF
Trigger: AAACATGACTGGACCTTCCAGGACCGAGATGCCCAATTCTACAGGTTCCCTGGACCGGAGCCCGAGCCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
3UTR CAA 72 bp TCACCGGCAGAATTGACCTTCACCAACACCTGTCCCTaGGTCCAGTGGTCCTCATGGGCCAAAGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: SPAELTFTNTCP*VQWSSWAKAAI
Trigger: GATGGCAGCTTTGGCCCATGAGGACCACTGGACCAAGGGACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 72 bp GCATCTGGCTGCAAGCCAACGACATCACCGGCAGAATaGACCTTCACCAACACCTGTCCCTTGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ASGCKPTTSPAE*TFTNTCPLVQW
Trigger: CCACTGGACCAAGGGACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGTCGTTGGCTTGCAGCCAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR TCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAATCCTCTTCCACATCTTaGGTTCCTGTAGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKSSSTS*VPVGSG
Trigger: GCCCGAGCCTACAGGAACTCAAGATGTGGAAGAGGA...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGTCTCTGTTGGGTCATaGGCACTGGAATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKVSVGS*ALESGL
Trigger: GAGACCGGATTCCAGTGCTCATGACCCAACAGAGAC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGGAGGGGAGAGCTTGGTaGGAGCCAATCGGTACACTC +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVEGRAW*EPIGTL
Trigger: GAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTC...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR TCA 90 bp GGCATGAAGACACTGTGGGTCAGCAGGAAGTCACTGAGGAACGTCTCTGTTGGGTCACCTGTTGGGTCATaGGCACTGGAATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GMKTLWVSRKSLRNVSVGSPVGS*ALESGL
Trigger: GAGACCGGATTCCAGTGCTCATGACCCAACAGGTGA...CCCAACAGAGACGTTCCTCAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134371.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGCTTCCCTGCCTTGTaGACATGCTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPSFPAL*TCSVVA
Trigger: GGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASATALI*SSSSKI
Trigger: GATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGC...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPATALI*SSSSKI
Trigger: GATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGC...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCATGCGGTTGAAGTCCTaGTTGTCCACACGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGMRLKS*LSTRRK
Trigger: CTTTCTGCGTGTGGACAAGCAGGACTTCAACCGCAT...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGATGCGGTTGAAGTCCTaGTTGTCCACACGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMMRLKS*LSTRRK
Trigger: CTTTCTGCGTGTGGACAAGCAGGACTTCAACCGCAT...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCTCTGCTGCCTCTTGTTaGAGATGTAGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGSAASC*RCRCCA
Trigger: AGCACAGCACCTACATCTGCAACAAGAGGCAGCAGA...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAATGGCTGGACTCCGGGTaGTCAGGGACTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKWLDSG*SGTAQN
Trigger: GTTCTGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGACTCTCCACCACAGCTaGGCCCACCTGCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKTLHHS*AHLPVV
Trigger: AACCACTGGCAGGTGGGCCCAGCTGTGGTGGAGAGT...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGCTCGCTGTTGGTAAGTaGTGTCCAGCGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVLAVGK*CPAESL
Trigger: CAGGGACTCCGCTGGACACCACTTACCAACAGCGAG...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCGCACATGCTCTGTGGTaGCCTGCTCCAGACTCACTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPAHALW*PAPDSL
Trigger: GAGTGAGTCTGGAGCAGGCCACCACAGAGCATGTGC...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTATGGGCATCTCGGTCCTaGAAGGTCCAGTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLWASRS*KVQSCF
Trigger: AAAACATGACTGGACCTTCCAGGACCGAGATGCCCA...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGTGGGCATCTCGGTCCTaGAAGGTCCAGTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMWASRS*KVQSCF
Trigger: AAAACATGACTGGACCTTCCAGGACCGAGATGCCCA...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGAGGAACGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: GSLLIQSPVPPSSPTHGMEERLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACGTTCCTC...CATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAGGCTCCACGTGGAAGTaGTGCAGGAGGGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKGSTWK*CRRAVK
Trigger: CTTCACTGCCCTCCTGCACCACTTCCACGTGGAGCC...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCCCAACACCTGTCCCTTaGTCCAGTGGTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPPTPVP*SSGPHG
Trigger: CCCATGAGGACCACTGGACCAAGGGACAGGTGTTGG...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SGPLGCTGSGFLGESACSFSTSV*FPSWMK
Trigger: CTTCATCCATGAGGGGAACCACACACTGGTAGAGAA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATTATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDYFLEG*WWLPEV
Trigger: CACCTCGGGCAGCCACCATCATCCTTCGAGAAAATA...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR TCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGACACGTGGAGATCCTTaGTCCCTGGCTGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKTRGDP*SLAVLV
Trigger: CACGAGGACAGCCAGGGATCAAGGATCTCCACGTGT...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATTGCTCTGTGGTGGCCTaGTCCAGACTCACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDCSVVA*SRLTLK
Trigger: TTTCAGAGTGAGTCTGGAGCAGGCCACCACAGAGCA...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CATGTTTTACATGACAAAGGGCACCCTCATCCAGCAACACTTGGCAGATGCCCACCTGCCTTGTGCACATaGTCTGTGGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HVLHDKGHPHPATLGRCPPALCT*SVVACS
Trigger: GGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGG...TGGGCATCTGCCAAGTGTTGCTGGATGAGGGTGCCCTTTGTCATGTAAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR GCA 90 bp CATGTTTTACATGACAAAGGGCACCCTCATCCAGCAACACTTGGCAGATGCCCAGCCAAGAGATGGCGGTaGAGGAGCTTCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HVLHDKGHPHPATLGRCPAKRWR*RSFPAL
Trigger: CAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGC...TGGGCATCTGCCAAGTGTTGCTGGATGAGGGTGCCCTTTGTCATGTAAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR GCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAAAGTCATCTCCCTCGTaGAACGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKKSSPS*NVVTSP
Trigger: GGGGCTGGTGACCACGTTGCACGAGGGAGATGACTT...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAAAGGATGATGGTGGCTaGCCGAGGTGCGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKKDDGG*PRCVVH
Trigger: GTGAACGACGCACCTCGGGCAGCCACCATCATCCTT...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYELRPL*RVLPVS
Trigger: TGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTC...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCATGTGCTCCTGCTCGCTaGCTCCAGCAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSCAPAR*LQQGLL
Trigger: CAGCAGACCCTGCTGGAGGCAGCGAGCAGGAGCACA...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATACTAGCCGCAGGATCTaGTGCCTCTTGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDTSRRI*CLLLQM
Trigger: CATCTGCAACAAGAGGCAGCAGATCCTGCGGCTAGT...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATCTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGA +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDLMGQS*HHFSHR
Trigger: TCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAG...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGA +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKLMGQS*HHFSHR
Trigger: TCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGTACCCTTGTCCCCCTaGCTGAACAACACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKVPLSP*LNNTVP
Trigger: AGGAACTGTGTTGTTCAGCCAGGGGGACAAGGGTAC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGGGCATGAAGACACTGTaGGTCAGCAGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: TALGNSPAYTQLFISDVWGMKTL*VSRKSL
Trigger: CAGTGACTTCCTGCTGACCCACAGTGTCTTCATGCC...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGGGCAGTGAAGAGCTaGGTGCTGGGCATGAAGACA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPRAVKS*VLGMKT
Trigger: TGTCTTCATGCCCAGCACCCAGCTCTTCACTGCCCT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAGTTTCTGGAGGAAGCTaGTGGCCACGGGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKVSGGS*WPRDPS
Trigger: ACTCGGATCCCGTGGCCACCAGCTTCCTCCAGAAAC...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAACAGCTGCTCAGGGTGTaGGGTCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKQLLRV*GQLMHF
Trigger: GAAGTGCATGAGCTGACCCCACACCCTGAGCAGCTG...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGAGAGACAGAGCTCTGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVRDRAL*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACAGAGCTCTGTCTCT...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTATTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAG +
Preference number: 4 (lower is better)
Translates to: MQMYRRADAQKARWEGSLFSTSV*FPSWMK
Trigger: CTTCATCCATGAGGGGAACCACACACTGGTAGAGAA...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCACTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPLSSWM*DTRLLS
Trigger: ACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAG...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGCTGTCCTCGTGGATGTaGGACACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVLSSWM*DTRLLS
Trigger: ACTCAGAAGCCGAGTGTCCCACATCCACGAGGACAG...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGCGGGACAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVRDSSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCG...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR CAA 72 bp GAGTTGCTGAGGCCAAACATGACCGCAAAGAAAGAGTaGAGGTTCTTCTGCTCCTTGAGGTGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ELLRPNMTAKKE*RFFCSLRWAAS
Trigger: GCTGGCAGCCCACCTCAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGTCATGTTTGGCCTCAGCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
3UTR CAA 72 bp CGCACCGCTCTGGCCATCATCCGCATCTTCTCAAAGTaGATGAGGTTCTCTACCAGTGTGTGGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RTALAIIRIFSK*MRFSTSVWFPS
Trigger: TGAGGGGAACCACACACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCGGATGATGGCCAGAGCGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR TCA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCATATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPYFLEG*WWLPEV
Trigger: CACCTCGGGCAGCCACCATCATCCTTCGAGAAAATA...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTCCTGCCTTGTGCACATaGTCTGTGGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTPALCT*SVVACS
Trigger: GGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGG...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGGCCACCGCCTTGATATaGAGCAGCTCTTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: TALGNSPAYTQLFISDVWATALI*SSSSKI
Trigger: GATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGC...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATATGCGGTTGAAGTCCTaGTTGTCCACACGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ETTALGNSPAYTQLFISDMRLKS*LSTRRK
Trigger: CTTTCTGCGTGTGGACAAGCAGGACTTCAACCGCAT...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR GCA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGELRPL*RVLPVS
Trigger: TGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTC...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCCTCATGGGCCAAAGCTaGCATCACTTCTCTCACCGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPLMGQS*HHFSHR
Trigger: TCGGTGAGAGAAGTGATGGCAGCTTTGGCCCATGAG...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCGATATAGTCGCAGATaGTATTTTCTGTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLRYSRR*YFLSRM
Trigger: CATCCGAGACAGAAAATACCATCTGCGACTATATCG...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCGATATAGTCGCAGATaGTATTTTCTGTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYRYSRR*YFLSRM
Trigger: CATCCGAGACAGAAAATACCATCTGCGACTATATCG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTCTCCCTCGTGCAACGTaGTCACCAGCCCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTLPRAT*SPAPCH
Trigger: ATGGCAAGGGGCTGGTGACCACGTTGCACGAGGGAG...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGAGGGCAGTGAAGAGCTaGGTGCTGGGCATGAAGACA +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKRAVKS*VLGMKT
Trigger: TGTCTTCATGCCCAGCACCCAGCTCTTCACTGCCCT...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAGGGCAGTGAAGAGCTaGGTGCTGGGCATGAAGACA +
Preference number: 4 (lower is better)
Translates to: LGNSPAYTQLFISDVWRERAVKS*VLGMKT
Trigger: TGTCTTCATGCCCAGCACCCAGCTCTTCACTGCCCT...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTTCTGCTGGCTCCACGTaGAAGTGGTGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTSAGST*KWCRRA
Trigger: TGCCCTCCTGCACCACTTCCACGTGGAGCCAGCAGA...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKVQWSS*AKAAIT
Trigger: AGTGATGGCAGCTTTGGCCCATGAGGACCACTGGAC...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAGTCCAGTGGTCCTCATaGGCCAAAGCTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: LGNSPAYTQLFISDVWREVQWSS*AKAAIT
Trigger: AGTGATGGCAGCTTTGGCCCATGAGGACCACTGGAC...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCCTCATGCACTTCCTGTaGGTCGACAACAAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPLMHFL*VDNKEP
Trigger: CGGCTCTTTGTTGTCGACCCACAGGAAGTGCATGAG...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAAGAGACAGAGCTCTGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKRDRAL*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACAGAGCTCTGTCTCT...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCACTGCTCAGAACACGTaGAGATCCTTGATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPTAQNT*RSLIPG
Trigger: GCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAACGGGACAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LGNSPAYTQLFISDVWRERDSSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCG...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGCGGGACAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKRDSSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTGTCCCG...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
3UTR CAA 72 bp TCCCGCTTCACCGAGTTAGAAAGGTGTGCCACCGCCTaGATATGCAGCAGCTCTTCAAAGATCAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SRFTELERCATA*ICSSSSKIRSS
Trigger: ACTGGACCTGATCTTTGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCTTTCTAACTCGGTGAAGCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000149419.9
ENSMUST00000175894.8
3UTR CAA 72 bp AACGTGGTCACCAGCCCCTTGCCATGGGTCACCACATaGACAGATCCCTTCCAGATAATGTACCACGAGGTA +
Preference number: 4 (lower is better)
Translates to: NVVTSPLPWVTT*TDPFQIMYHEV
Trigger: TACCTCGTGGTACATTATCTGGAAGGGATCTGTCAATGTGGTGACCCATGGCAAGGGGCTGGTGACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACCTTGTCCCCCTGGCTaGACAACACAGTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSPCPPG*TTQFLP
Trigger: AGGCAGGAACTGTGTTGTTCAGCCAGGGGGACAAGG...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGTCTGCTCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GNSPAYTQLFISDVWREKSAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGAGCAGA...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTAACTTCCTGAGTAGCTaGGCCCGGGAGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTNFLSS*AREPGT
Trigger: TGTTCCTGGCTCCCGGGCTCAGCTACTCAGGAAGTT...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCAGAGGGGAGAGCTTGGTaGGAGCCAATCGGTACACTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSEGRAW*EPIGTL
Trigger: GAGTGTACCGATTGGCTCTCACCAAGCTCTCCCCTC...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAATGCTCTGTGGTGGCCTaGTCCAGACTCACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKCSVVA*SRLTLK
Trigger: TTTCAGAGTGAGTCTGGAGCAGGCCACCACAGAGCA...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCAAGCTTCCCTGCCTTGTaGACATGCTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSSFPAL*TCSVVA
Trigger: GGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCT...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACTGTGATGCGGTTGAAGTCCTaGTTGTCCACACGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PRALSHTHTHTHTHTQTVMRLKS*LSTRRK
Trigger: CTTTCTGCGTGTGGACAAGCAGGACTTCAACCGCAT...CACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp CAGCAGGAAGTCACTGAGGAACGTCTCTGTTGGGCAGGGTTAGGGTTGGGAAGGGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QQEVTEERLCWAGLGLGRELRPL*RVLPVS
Trigger: TGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTC...CCTTCCCAACCCTAACCCTGCCCAACAGAGACGTTCCTCAGTGACTTCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134371.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCTCTGCTGCCTCTTGTTaGAGATGTAGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPSAASC*RCRCCA
Trigger: AGCACAGCACCTACATCTGCAACAAGAGGCAGCAGA...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGCACATGCTCTGTGGTaGCCTGCTCCAGACTCACTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTAHALW*PAPDSL
Trigger: GAGTGAGTCTGGAGCAGGCCACCACAGAGCATGTGC...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCCGATATAGTCGCAGATaGTATTTTCTGTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPRYSRR*YFLSRM
Trigger: CATCCGAGACAGAAAATACCATCTGCGACTATATCG...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCAAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSKRFQS*SVSWPA
Trigger: GGCAGGCCAGCTGACCGACCATGACTGGAACCTCTT...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCAGTCTCTGTTGGGTCATaGGCACTGGAATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSVSVGS*ALESGL
Trigger: GAGACCGGATTCCAGTGCTCATGACCCAACAGAGAC...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp GGTCCAGTCATGTTTTACATGACAAAGGGCACCCTCATCCAGCAACACTTGGCATGCTCTGTGGTGGCCTaGTCCAGACTCACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GPVMFYMTKGTLIQQHLACSVVA*SRLTLK
Trigger: TTTCAGAGTGAGTCTGGAGCAGGCCACCACAGAGCA...TGCCAAGTGTTGCTGGATGAGGGTGCCCTTTGTCATGTAAAACATGACTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR CCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAATGGGCATCTCGGTCCTaGAAGGTCCAGTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKWASRS*KVQSCF
Trigger: AAAACATGACTGGACCTTCCAGGACCGAGATGCCCA...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAGAGGAACGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKEERLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACGTTCCTC...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCATGTCCCTTGGTCCAGTaGTCCTCATGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSCPLVQ*SSWAKA
Trigger: AGCTTTGGCCCATGAGGACCACTGGACCAAGGGACA...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCTTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHKLCRCELTGPFSTSV*FPSWMK
Trigger: CTTCATCCATGAGGGGAACCACACACTGGTAGAGAA...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
3UTR CAA 72 bp ACTGGATGGTACAGCTGCACGTACAGTCGTACAGACTaGCAAACATGCAGATGTACAGACGTGCAGATGCGC +
Preference number: 4 (lower is better)
Translates to: TGWYSCTYSRTD*QTCRCTDVQMR
Trigger: GCGCATCTGCACGTCTGTACATCTGCATGTTTGCAAGTCTGTACGACTGTACGTGCAGCTGTACCATCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCATATTTTCTCGAAGGATaGTGGTGGCTGCCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSYFLEG*WWLPEV
Trigger: CACCTCGGGCAGCCACCATCATCCTTCGAGAAAATA...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTACTAGCCGCAGGATCTaGTGCCTCTTGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTTSRRI*CLLLQM
Trigger: CATCTGCAACAAGAGGCAGCAGATCCTGCGGCTAGT...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAACGATATAGTCGCAGATaGTATTTTCTGTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKRYSRR*YFLSRM
Trigger: CATCCGAGACAGAAAATACCATCTGCGACTATATCG...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTACTGCTCAGAACACGTaGAGATCCTTGATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTTAQNT*RSLIPG
Trigger: GCCAGGGATCAAGGATCTCCACGTGTTCTGAGCAGT...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTTTCTCTACCAGTGTGTaGTTCCCCTCATGGATGAAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHKLCRCELTFSTSV*FPSWMK
Trigger: CTTCATCCATGAGGGGAACCACACACTGGTAGAGAA...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCAGAACTAAGACCACTTTaGCGTGTTCTTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTNCADVSSELRPL*RVLPVS
Trigger: TGAGACTGGAAGAACACGGCAAAGTGGTCTTAGTTC...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CCA 90 bp CATGTTTTACATGACAAAGGGCACCCTCATCCAGCAACACTTGGCAGATGCCCACGATATAGTCGCAGATaGTATTTTCTGTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: HVLHDKGHPHPATLGRCPRYSRR*YFLSRM
Trigger: CATCCGAGACAGAAAATACCATCTGCGACTATATCG...TGGGCATCTGCCAAGTGTTGCTGGATGAGGGTGCCCTTTGTCATGTAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149419.9
CDS-3UTR CAA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGTGGCCTGCCAGGTCCTaGGCGCTCACTAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWWPARS*ALTRSS
Trigger: GCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCA...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCATGGCCTGCCAGGTCCTaGGCGCTCACTAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPWPARS*ALTRSS
Trigger: GCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCA...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGCAGTACTGCAGCTCGTaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAACGAGCTGCAGTACTG...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCACGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACC +
Preference number: 5 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPRLMAE*LRPNMT
Trigger: GGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACC +
Preference number: 5 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWRLMAE*LRPNMT
Trigger: GGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGGCACCCGCGCTGCTaGGGAGGGGTTCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYWHPRC*GGVPPG
Trigger: ACCAGGAGGAACCCCTCCCAAGCAGCGCGGGTGCCA...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAAGGTGTGCCACCGCCTaGATATGCAGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPRCATA*ICSSSS
Trigger: TGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCT...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTATGGCACCCGCGCTGCTaGGGAGGGGTTCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: MQMYRRADAQKARWEGSLWHPRC*GGVPPG
Trigger: ACCAGGAGGAACCCCTCCCAAGCAGCGCGGGTGCCA...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCTGGCACCCGCGCTGCTaGGGAGGGGTTCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGWHPRC*GGVPPG
Trigger: ACCAGGAGGAACCCCTCCCAAGCAGCGCGGGTGCCA...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCATGTTCCCTCAGCAAGTaGCTAAGTCGGGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPCSLSK*LSRASL
Trigger: CAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACA...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGCAGTACTGCAGCTCGTaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAACGAGCTGCAGTACTG...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCCGACACTGCCCACTCCAGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAATGAAGGTCACGTCTTaGAGCAGCAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PDTAHSRALSPLCGEPCPMKVTS*SSRGMK
Trigger: CTTCATGCCCCTGCTGCTCAAAGACGTGACCTTCAT...TGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCTGGAGTGGGCAGTGTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGATGAAGGTCACGTCTTaGAGCAGCAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWMKVTS*SSRGMK
Trigger: CTTCATGCCCCTGCTGCTCAAAGACGTGACCTTCAT...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS GCA 90 bp GAGGGTAGGGTACGTGGCCAAGAGATGGCGGTGCAGGAGCTTCCCTaGCTTGTGCACATGCTCTGTGGTGGCCTGCTCCAGACTCACTCT +
Preference number: 5 (lower is better)
Translates to: EGRVRGQEMAVQELP*LVHMLCGGLLQTHS
Trigger: AGAGTGAGTCTGGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGCCACGTACCCTACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000149419.9
ENSMUST00000177352.8
CDS CCA 90 bp AGGTGCTCCTGCACCTGGTGGATCCTGTTGAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCCAGGTCCTTGGCGCTCACTAGGTCC +
Preference number: 5 (lower is better)
Translates to: RCSCTWWILLKRFQS*SVSWPARSLALTRS
Trigger: GGACCTAGTGAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGCAGGAGCACCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGTCCTTGATGATGCGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWSLMMR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGCATCATCAAGGA...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCAGTACTGCAGCTCGTaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAACGAGCTGCAGTACTG...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACC +
Preference number: 5 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYRLMAE*LRPNMT
Trigger: GGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACC +
Preference number: 5 (lower is better)
Translates to: SGPLGCTGSGFLGESACSRLMAE*LRPNMT
Trigger: GGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACC +
Preference number: 5 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYRLMAE*LRPNMT
Trigger: GGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCTACCACGAGGTACCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGTACCTCGTGGTA...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCTACCACGAGGTACCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGTACCTCGTGGTA...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTACCACGAGGTACCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: SGPLGCTGSGFLGESACSYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGTACCTCGTGGTA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACAGGTTCTTCTGCTCCTaGAGGTGGGCTGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CRCTDVQMRRRPGGRALYRFFCS*RWAASL
Trigger: CAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCT...GTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCAGGTTCTTCTGCTCCTaGAGGTGGGCTGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLRFFCS*RWAASL
Trigger: CAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCT...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGGTTCTTCTGCTCCTaGAGGTGGGCTGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: YRRADAQKARWEGSLLIQRFFCS*RWAASL
Trigger: CAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCT...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACAGGTTCTTCTGCTCCTaGAGGTGGGCTGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYRFFCS*RWAASL
Trigger: CAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCT...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCACAGGAGGGGAGAGCTaGGTGAGAGCCAATCGGTAC +
Preference number: 5 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTTGGES*VRANRY
Trigger: GTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCCTCTTCAACACCATATaGAGCAGCGTGCCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: SGPLGCTGSGFLGESACSLFNTI*SSVPSG
Trigger: TCCGGAGGGCACGCTGCTCAATATGGTGTTGAAGAG...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS-3UTR CAA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTCTTCAACACCATATaGAGCAGCGTGCCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLLFNTI*SSVPSG
Trigger: TCCGGAGGGCACGCTGCTCAATATGGTGTTGAAGAG...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCATGGCCTGCCAGGTCCTaGGCGCTCACTAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPWPARS*ALTRSS
Trigger: GCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCA...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCCTCTGAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCCAGTACTGCAGCTCGTaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SSETTALGNSPAYTQLFIQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAACGAGCTGCAGTACTG...GATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCACAGGAGGGGAGAGCTaGGTGAGAGCCAATCGGTAC +
Preference number: 5 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPTGGES*VRANRY
Trigger: GTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGT...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CAA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAACAGGAGGGGAGAGCTaGGTGAGAGCCAATCGGTAC +
Preference number: 5 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASTGGES*VRANRY
Trigger: GTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGT...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAACAGGAGGGGAGAGCTaGGTGAGAGCCAATCGGTAC +
Preference number: 5 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPTGGES*VRANRY
Trigger: GTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGT...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp AGGGCCTTGAGTCCGCTCTGTGGAGAGCCCTGCCCAGCTGTGGCTGGCCTCTGGCGCATCTTCTCAAAGTaGATGAGGTTCTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: RALSPLCGEPCPAVAGLWRIFSK*MRFSTS
Trigger: ACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCG...CCAGAGGCCAGCCACAGCTGGGCAGGGCTCTCCACAGAGCGGACTCAAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGGACAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YRRADAQKARWEGSLLIQDSSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTC...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCAGGGAACCTGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLREPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACAGGTTCCCT...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTAAGGTGTGCCACCGCCTaGATATGCAGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MQMYRRADAQKARWEGSLRCATA*ICSSSS
Trigger: TGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCT...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGCCATGGGTCACCACATaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: QTCRCAEGPVGGLSTDPEPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAATGTGGTGACCCATGG...CTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAGTGGTCACCAGCCCCTaGCCATGGGTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKVVTSP*PWVTTL
Trigger: CAATGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGGTCACCAGCCCCTaGCCATGGGTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: ETTALGNSPAYTQLFISDVVTSP*PWVTTL
Trigger: CAATGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCACCTGGTGGATCCTGTaGAAGAGGTTCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTTWWIL*KRFQSW
Trigger: CCATGACTGGAACCTCTTCAACAGGATCCACCAGGT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACCTGGTGGATCCTGTaGAAGAGGTTCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHTWWIL*KRFQSW
Trigger: CCATGACTGGAACCTCTTCAACAGGATCCACCAGGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCCCAGGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACAATGAAGGTCACGTCTTaGAGCAGCAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: SQARPHPGLSHTHTHTHTMKVTS*SSRGMK
Trigger: CTTCATGCCCCTGCTGCTCAAAGACGTGACCTTCAT...TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACATGAAGGTCACGTCTTaGAGCAGCAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYMKVTS*SSRGMK
Trigger: CTTCATGCCCCTGCTGCTCAAAGACGTGACCTTCAT...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCAAACACGTGGAGATCCTaGATCCCTGGCTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: VGGLSTDPESCTSQLSYPNTWRS*IPGCPR
Trigger: ACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTT...TGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCCTCAAACACGTGGAGATCCTaGATCCCTGGCTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: LLIQSPVPPSSPTHGMASNTWRS*IPGCPR
Trigger: ACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTT...TGAGGCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCGACAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGDSSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTC...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CAAACATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTGACAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QTCRCTDVQMRRRPGGRADSSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTC...AGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCATGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCAGGGAACCTGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPREPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACAGGTTCCCT...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CAA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCAACACAGTTCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGAACTGTGTT...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCAACACAGTTCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LWTSWLHRLWLPRRECLLNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGAACTGTGTT...GAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCCATGGGTCACCACATaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAATGTGGTGACCCATGG...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGGTCACCAGCCCCTaGCCATGGGTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPVVTSP*PWVTTL
Trigger: CAATGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCTGGACCTCTTGGTTGCACAGGCTCTGGCTTCCTCGGAGAGAGTGCCTGCTCCTCCTTGATGATGCGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: SGPLGCTGSGFLGESACSSLMMR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGCATCATCAAGGA...GGAGCAGGCACTCTCTCCGAGGAAGCCAGAGCCTGTGCAACCAAGAGGTCCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCTGTTCCCTCAGCAAGTaGCTAAGTCGGGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPCSLSK*LSRASL
Trigger: CAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACA...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCATGGCACCCGCGCTGCTaGGGAGGGGTTCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTNCADVSSWHPRC*GGVPPG
Trigger: ACCAGGAGGAACCCCTCCCAAGCAGCGCGGGTGCCA...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACACATCACCGGCAGAATaGACCTTCACCAACACCTGT +
Preference number: 5 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYTSPAE*TFTNTC
Trigger: ACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGT...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GGCAAGGCCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACATCACCGGCAGAATaGACCTTCACCAACACCTGT +
Preference number: 5 (lower is better)
Translates to: GKAPPRALSHTHTHTHTHTSPAE*TFTNTC
Trigger: ACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGGCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCACCTGGTGGATCCTGTaGAAGAGGTTCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGTWWIL*KRFQSW
Trigger: CCATGACTGGAACCTCTTCAACAGGATCCACCAGGT...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGGTTCTTCTGCTCCTaGAGGTGGGCTGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TALGNSPAYTQLFISDVWRFFCS*RWAASL
Trigger: CAAGCTGGCAGCCCACCTCAAGGAGCAGAAGAACCT...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp CCCCACCCAGGGCTCTCTCACACACACACACACACACACACACACACACACAAAACAGGAGGGGAGAGCTaGGTGAGAGCCAATCGGTAC +
Preference number: 5 (lower is better)
Translates to: PHPGLSHTHTHTHTHTHKTGGES*VRANRY
Trigger: GTACCGATTGGCTCTCACCAAGCTCTCCCCTCCTGT...TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGCCCTGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TCCTCTGAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCAACACGTGGAGATCCTaGATCCCTGGCTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: SSETTALGNSPAYTQLFINTWRS*IPGCPR
Trigger: ACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTT...GATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp TTCCCGCTTCACCGAGTTAGAAAGGTGTGCCACCGCCTTGATATGCAGCAGCTCCTCTTCAACACCATATaGAGCAGCGTGCCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: FPLHRVRKVCHRLDMQQLLFNTI*SSVPSG
Trigger: TCCGGAGGGCACGCTGCTCAATATGGTGTTGAAGAG...GAGCTGCTGCATATCAAGGCGGTGGCACACCTTTCTAACTCGGTGAAGCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS-3UTR CAA 90 bp CTTTTCTGTACCCAGGGAGCAACCTCCTCCACCAGCTTTCCCAGCCACACACCCAACACAGTTCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LFCTQGATSSTSFPSHTPNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGAACTGTGTT...GGGTGTGTGGCTGGGAAAGCTGGTGGAGGAGGTTGCTCCCTGGGTACAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126854.9
CDS-3UTR CAA 90 bp ATGCAGATGTACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTAAACACAGTTCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: MQMYRRADAQKARWEGSLNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGAACTGTGTT...TAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTACATCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAGTGGTCACCAGCCCCTaGCCATGGGTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKVVTSP*PWVTTL
Trigger: CAATGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCACGGCATGGCTCCTTGATGATGCGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LSTDPESCTSQLSYPRHGSLMMR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGCATCATCAAGGA...GCCATGCCGTGGGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTTGGCCTGCCAGGTCCTaGGCGCTCACTAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHKLCRCELTWPARS*ALTRSS
Trigger: GCTGGACCTAGTGAGCGCCAAGGACCTGGCAGGCCA...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TACAGACGTGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGACCGCAAAGAAAGAGTaGAGGTTCTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: YRRADAQKARWEGSLLIQTAKKE*RFFCSL
Trigger: CAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGT...CTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCACGTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp TGCAGATGCGCAGAAGGCCCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCGCAAAGAAAGAGTaGAGGTTCTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CRCAEGPVGGLSTDPESCTAKKE*RFFCSL
Trigger: CAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGT...ACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGGGCCTTCTGCGCATCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGGTGTGCCACCGCCTaGATATGCAGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHKLCRCELTGPRCATA*ICSSSS
Trigger: TGAAGAGCTGCTGCATATCAAGGCGGTGGCACACCT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GAGACCACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATTGTTCCCTCAGCAAGTaGCTAAGTCGGGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: ETTALGNSPAYTQLFISDCSLSK*LSRASL
Trigger: CAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACA...ATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp CGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCCGCATCTTCTCAAAGTaGATGAGGTTCTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: RWEGSLLIQSPVPPSSPTRIFSK*MRFSTS
Trigger: ACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCG...GGTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CCGGTGGGAGGGCTCTCTACTGATCCAGAGTCCTGTACCTCCCAGCTCTCCTACCGCATCTTCTCAAAGTaGATGAGGTTCTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: PVGGLSTDPESCTSQLSYRIFSK*MRFSTS
Trigger: ACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCG...GTAGGAGAGCTGGGAGGTACAGGACTCTGGATCAGTAGAGAGCCCTCCCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000134885.3
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAACACGTGGAGATCCTaGATCCCTGGCTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: THTHTHTHKLCRCELTGPNTWRS*IPGCPR
Trigger: ACGAGGACAGCCAGGGATCAAGGATCTCCACGTGTT...GGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGCCATGGGTCACCACATaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: TALGNSPAYTQLFISDVWPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAATGTGGTGACCCATGG...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCATGTTCCCTCAGCAAGTaGCTAAGTCGGGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPCSLSK*LSRASL
Trigger: CAGAGATGCCCGACTTAGCAACTTGCTGAGGGAACA...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAACCTGGTGGATCCTGTaGAAGAGGTTCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTNCADVSSLAPTWWIL*KRFQSW
Trigger: CCATGACTGGAACCTCTTCAACAGGATCCACCAGGT...TGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp GGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAAAGGACAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GNSPAYTQLFISDVWREKDSSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTC...CTTTTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCATACCACGAGGTACCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTNCADVSSYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGTACCTCGTGGTA...TGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAAATGAAGGTCACGTCTTaGAGCAGCAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKMKVTS*SSRGMK
Trigger: CTTCATGCCCCTGCTGCTCAAAGACGTGACCTTCAT...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAACCATGGGTCACCACATaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: LGNSPAYTQLFISDVWREPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAATGTGGTGACCCATGG...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAACATCACCGGCAGAATaGACCTTCACCAACACCTGT +
Preference number: 5 (lower is better)
Translates to: LGNSPAYTQLFISDVWRETSPAE*TFTNTC
Trigger: ACAGGTGTTGGTGAAGGTCAATTCTGCCGGTGATGT...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp ACCGCTCTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGCGCATCTTCTCAAAGTaGATGAGGTTCTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: TALGNSPAYTQLFISDVWRIFSK*MRFSTS
Trigger: ACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCG...CCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAGAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGACAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHKLCRCELTDSSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTGTC...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CTAGGCAACAGCCCTGCCTACACCCAGCTGTTTATCTCAGATGTGTGGAGAGAAACCGCAAAGAAAGAGTaGAGGTTCTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGNSPAYTQLFISDVWRETAKKE*RFFCSL
Trigger: CAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGT...TTCTCTCCACACATCTGAGATAAACAGCTGGGTGTAGGCAGGGCTGTTGCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTTCCTTGATGATGCGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHKLCRCELTSLMMR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGCATCATCAAGGA...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp CACACACACACACACACAAACTGTGCAGATGTGAGCTCACTGGCCCCAGTGAAACGCATCTTCTCAAAGTaGATGAGGTTCTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: HTHTHTNCADVSSLAPVKRIFSK*MRFSTS
Trigger: ACTGGTAGAGAACCTCATCAACTTTGAGAAGATGCG...TTTCACTGGGGCCAGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACAAACTGTGCAGATGTGAGCTCACTACCGCAAAGAAAGAGTaGAGGTTCTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHKLCRCELTTAKKE*RFFCSL
Trigger: CAAGGAGCAGAAGAACCTCAACTCTTTCTTTGCGGT...AGTGAGCTCACATCTGCACAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000177352.8
CDS CCA 72 bp GTCCGGGAGACCTCCCACCTGCGGTGCCCCCACAGCTaGACTCTCCACCACAGCTGGGCCCACCTGCCAGTG +
Preference number: 6 (lower is better)
Translates to: VRETSHLRCPHS*TLHHSWAHLPV
Trigger: CACTGGCAGGTGGGCCCAGCTGTGGTGGAGAGTCCAGCTGTGGGGGCACCGCAGGTGGGAGGTCTCCCGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000135080.2
ENSMUST00000175894.8
CDS GCA 72 bp GTGCCCTCCGGAACCACGTCCGGGAGACCTCCCACCTaGGGTGCCCCCACAGCTGGACTCTCCACCACAGCT +
Preference number: 6 (lower is better)
Translates to: VPSGTTSGRPPT*GAPTAGLSTTA
Trigger: AGCTGTGGTGGAGAGTCCAGCTGTGGGGGCACCGCAGGTGGGAGGTCTCCCGGACGTGGTTCCGGAGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000135080.2
ENSMUST00000175894.8
CDS GCA 72 bp ATCCGTACGCTGACCTGGGCCAGCGGAGTCCCTGGATaGAGCTGGGGCGCCGGTGCTCGAACACTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: IRTLTWASGVPG*SWGAGARTLAG
Trigger: ACCAGCTAGTGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGCCCAGGTCAGCGTACGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175894.8
CDS CCA 72 bp TCCTCGCTGTTGGTAAGTGGTGTCCAGCGGAGTCCCTaGATGCAGCTGGGGCGCCGGTGCTCGAACACTAGC +
Preference number: 6 (lower is better)
Translates to: SSLLVSGVQRSP*MQLGRRCSNTS
Trigger: GCTAGTGTTCGAGCACCGGCGCCCCAGCTGCATCCAGGGACTCCGCTGGACACCACTTACCAACAGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000149419.9
ENSMUST00000177352.8
CDS CCA 72 bp GGGGAGAGCTTGGTGAGAGCCAATCGGTACACTCGGTaGTTCCAGGAAGGGTCCTCCCAGGTGTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GESLVRANRYTR*FQEGSSQVWAS
Trigger: GCTGGCCCACACCTGGGAGGACCCTTCCTGGAACCACCGAGTGTACCGATTGGCTCTCACCAAGCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128775.9
CDS GCA 72 bp GTACGTGGCCAAGAGATGGCGGTGCAGGAGCTTCCCTaGCTTGTGCACATGCTCTGTGGTGGCCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VRGQEMAVQELP*LVHMLCGGLLQ
Trigger: CTGGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGCCACGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000149419.9
ENSMUST00000177352.8
CDS TCA 72 bp AGCAGCGGGGACGGTGCATTCTCTTCAACACCATATTaGGCAGCGTGCCCTCCGGAACCACGTCCGGGAGAC +
Preference number: 6 (lower is better)
Translates to: SSGDGAFSSTPY*AACPPEPRPGD
Trigger: GTCTCCCGGACGTGGTTCCGGAGGGCACGCTGCTCAATATGGTGTTGAAGAGAATGCACCGTCCCCGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS TCA 72 bp CATCCCGCAGGTGCTCCTGCACCTGGTGGATCCTGTTaGAGAGGTTCCAGTCATGGTCGGTCAGCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: HPAGAPAPGGSC*RGSSHGRSAGL
Trigger: CAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGCAGGAGCACCTGCGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129223.9
CDS CCA 72 bp CTGTCTCGGATGAGGGTAGGGTACGTGGCCAAGAGATaGCGGTGCAGGAGCTTCCCTGCCTTGTGCACATGC +
Preference number: 6 (lower is better)
Translates to: LSRMRVGYVAKR*RCRSFPALCTC
Trigger: GCATGTGCACAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGCCACGTACCCTACCCTCATCCGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000149419.9
ENSMUST00000177352.8
CDS CCA 72 bp TGCACCTGGTGGATCCTGTTGAAGAGGTTCCAGTCATaGTCGGTCAGCTGGCCTGCCAGGTCCTTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: CTWWILLKRFQS*SVSWPARSLAL
Trigger: GAGCGCCAAGGACCTGGCAGGCCAGCTGACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129223.9
CDS CCA 72 bp GCGGTGGTGACATCCCGCAGGTGCTCCTGCACCTGGTaGATCCTGTTGAAGAGGTTCCAGTCATGGTCGGTC +
Preference number: 6 (lower is better)
Translates to: AVVTSRRCSCTW*ILLKRFQSWSV
Trigger: GACCGACCATGACTGGAACCTCTTCAACAGGATCCACCAGGTGCAGGAGCACCTGCGGGATGTCACCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129223.9
CDS CAA 72 bp CAGCAGCGGGGACGGTGCATTCTCTTCAACACCATATaGAGCAGCGTGCCCTCCGGAACCACGTCCGGGAGA +
Preference number: 6 (lower is better)
Translates to: QQRGRCILFNTI*SSVPSGTTSGR
Trigger: TCTCCCGGACGTGGTTCCGGAGGGCACGCTGCTCAATATGGTGTTGAAGAGAATGCACCGTCCCCGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000175894.8
CDS CAA 90 bp GTAGGGTACGTGGCCAAGAGATGGCGGTGCAGGAGCTTCCCTGCCTaGTGCACATGCTCTGTGGTGGCCTGCTCCAGACTCACTCTGAAA +
Preference number: 6 (lower is better)
Translates to: VGYVAKRWRCRSFPA*CTCSVVACSRLTLK
Trigger: TTTCAGAGTGAGTCTGGAGCAGGCCACCACAGAGCATGTGCACAAGGCAGGGAAGCTCCTGCACCGCCATCTCTTGGCCACGTACCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000149419.9
ENSMUST00000177352.8
CDS CAA 72 bp TCCAGACTCACTCTGAAATCCAGGGAGTCCTCGCTGTaGGTAAGTGGTGTCCAGCGGAGTCCCTGGATGCAG +
Preference number: 6 (lower is better)
Translates to: SRLTLKSRESSL*VSGVQRSPWMQ
Trigger: CTGCATCCAGGGACTCCGCTGGACACCACTTACCAACAGCGAGGACTCCCTGGATTTCAGAGTGAGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000149419.9
ENSMUST00000177352.8
CDS CCA 72 bp TCCCGGCCAGAGCAGCAATGCCGATATAGTCGCAGATaGTATTTTCTGTCTCGGATGAGGGTAGGGTACGTG +
Preference number: 6 (lower is better)
Translates to: SRPEQQCRYSRR*YFLSRMRVGYV
Trigger: CACGTACCCTACCCTCATCCGAGACAGAAAATACCATCTGCGACTATATCGGCATTGCTGCTCTGGCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000177352.8
CDS GCA 72 bp AAGATCCCATCCACTAGCTCCCGGCCAGAGCAGCAATaGCGATATAGTCGCAGATGGTATTTTCTGTCTCGG +
Preference number: 6 (lower is better)
Translates to: KIPSTSSRPEQQ*RYSRRWYFLSR
Trigger: CCGAGACAGAAAATACCATCTGCGACTATATCGGCATTGCTGCTCTGGCCGGGAGCTAGTGGATGGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000126854.9
ENSMUST00000128775.9
ENSMUST00000129223.9
ENSMUST00000146620.2
ENSMUST00000177352.8