Pregenerated sensors for RAP1GDS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028149Ensembl transcript IDs: ENSMUST00000029796.11, ENSMUST00000098574.9, ENSMUST00000196106.5, ENSMUST00000196280.5, ENSMUST00000200396.2
Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAACTGGGATGGCTAGATTCCTGAGGGCACTTAGTGCGGCGTGCTaGACCGTCACGTTCCCGTCTTCTACGTGTCTGTCCAGCAAATCC | + |
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Preference number: 1 (lower is better) Translates to: TTGMARFLRALSAAC*TVTFPSSTCLSSKS Trigger: GGATTTGCTGGACAGACACGTAGAAGACGGGAACGTGACGGTGCAGCACGCCGCACTAAGTGCCCTCAGGAATCTAGCCATCCCAGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | ACTCACTTGGTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATaGCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: THLVVVSGSDEHTTL*QEESLRRVLACSLG Trigger: TCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCACCAAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR GCA 90 bp | TTTACAACTGGGATGGCTAGATTCCTGAGGGCACTTAGTGCGGCGTaGTGCACCGTCACGTTCCCGTCTTCTACGTGTCTGTCCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: FTTGMARFLRALSAA*CTVTFPSSTCLSSK Trigger: TTTGCTGGACAGACACGTAGAAGACGGGAACGTGACGGTGCAGCACGCCGCACTAAGTGCCCTCAGGAATCTAGCCATCCCAGTTGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | CTGAGCACTTGCGAGATCCTTCTCAGCGGGACCCAGTTCCAAGGCTaGTATCAGTGCCAGGGCGACAAGAGCTTCATTCTGCATGATTAC | + |
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Preference number: 1 (lower is better) Translates to: LSTCEILLSGTQFQG*YQCQGDKSFILHDY Trigger: GTAATCATGCAGAATGAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGTCCCGCTGAGAAGGATCTCGCAAGTGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR CCA 90 bp | CTGGCAAAATTTGCAATGGCTAATGCCCCAGCCAGCTGCAGCTGGTaGTTATTCGATGGGATCCAGGAGAGCACCCTTTGGAACACACTG | + |
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Preference number: 1 (lower is better) Translates to: LAKFAMANAPASCSW*LFDGIQESTLWNTL Trigger: CAGTGTGTTCCAAAGGGTGCTCTCCTGGATCCCATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | TGCGAGATCCTTCTCAGCGGGACCCAGTTCCAAGGCTGCTATCAGTaGCAGGGCGACAAGAGCTTCATTCTGCATGATTACATGTTCACT | + |
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Preference number: 1 (lower is better) Translates to: CEILLSGTQFQGCYQ*QGDKSFILHDYMFT Trigger: AGTGAACATGTAATCATGCAGAATGAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGTCCCGCTGAGAAGGATCTCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR CCA 90 bp | TTCCTGGCAAAATTTGCAATGGCTAATGCCCCAGCCAGCTGCAGCTaGTGGTTATTCGATGGGATCCAGGAGAGCACCCTTTGGAACACA | + |
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Preference number: 1 (lower is better) Translates to: FLAKFAMANAPASCS*WLFDGIQESTLWNT Trigger: TGTGTTCCAAAGGGTGCTCTCCTGGATCCCATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | TTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTCTTTaGGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LVAVTSTLHYAKKSL*GESWLAAWEIIVVL Trigger: GAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR CCA 90 bp | ACGAGCACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTaGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: TSTLHYAKKSLCGES*LAAWEIIVVLSGKV Trigger: CACTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR TCA 90 bp | ACTCAAGTTCTGCTAAATTCCCGAACGCAACGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGTGAATGCCCAGTAGCTTCACTAAGG | + |
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Preference number: 1 (lower is better) Translates to: TQVLLNSRTQRDTSR*VLHCGSECPVASLR Trigger: CCTTAGTGAAGCTACTGGGCATTCACTGCCACAATGCAGCACTCACCGAGATGTGTCTCGTTGCGTTCGGGAATTTAGCAGAACTTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR TCA 90 bp | ATGAGGGCAGAGAGCAGTCTGTTTGATTCGCCCATCACGCCGGCATaGTCTTTGGCTTCACACCATTCAACCAAACGCTCTACCAGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: MRAESSLFDSPITPA*SLASHHSTKRSTSL Trigger: TAAACTGGTAGAGCGTTTGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGGCGAATCAAACAGACTGCTCTCTGCCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR CCA 90 bp | TTAAGCTCGGCAACGTCGTCCTCTTTGTTGCTATCCACCTTCTGTTaGACGATCTCTAGGAGACACTCTACCAAACCTGCTTCAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: LSSATSSSLLLSTFC*TISRRHSTKPASTS Trigger: GCTGGTTGAAGCAGGTTTGGTAGAGTGTCTCCTAGAGATCGTCCAACAGAAGGTGGATAGCAACAAAGAGGACGACGTTGCCGAGCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR TCA 90 bp | CATTCTCATTGCTATAGTTCATCAGCATGCCACAAAAGACAGTCATaGGCTTCTCACTGGCGGGATCTGTCCTACCGCACAGCGACCTTA | + |
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Preference number: 1 (lower is better) Translates to: HSHCYSSSACHKRQS*ASHWRDLSYRTATL Trigger: TAAGGTCGCTGTGCGGTAGGACAGATCCCGCCAGTGAGAAGCTCATGACTGTCTTTTGTGGCATGCTGATGAACTATAGCAATGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | GTGGTTCTCAGTGGGAAAGTGGAGGTGAAGAACTCTAACAATGACTaGTATGAGGCCATCTGCAGAATGTACTGGACTGGCTACTATGGC | + |
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Preference number: 1 (lower is better) Translates to: VVLSGKVEVKNSNND*YEAICRMYWTGYYG Trigger: GCCATAGTAGCCAGTCCAGTACATTCTGCAGATGGCCTCATAGCAGTCATTGTTAGAGTTCTTCACCTCCACTTTCCCACTGAGAACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR GCA 90 bp | AGTTCCAAGGCTGCTATCAGTGCCAGGGCGACAAGAGCTTCATTCTaGATGATTACATGTTCACTAGTTGCCATGGTAACCAGGTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: SSKAAISARATRASF*MITCSLVAMVTRCL Trigger: CAAGCACCTGGTTACCATGGCAACTAGTGAACATGTAATCATGCAGAATGAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | TTTTGGTTTAAAAGTAGAGCTGGCTCAGCAGTCAGGAGTACATACTaGTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAA | + |
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Preference number: 1 (lower is better) Translates to: FWFKSRAGSAVRSTY*SYETEGLSVVPRTQ Trigger: TTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTCCTGACTGCTGAGCCAGCTCTACTTTTAAACCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
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| 3UTR TCA 90 bp | CTTATCCAGCCCAGGAGAAAGACAATAAAGCACTCATTTCTCCAGTaGGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCA | + |
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Preference number: 1 (lower is better) Translates to: LIQPRRKTIKHSFLQ*ASTGAHHSSLIWTS Trigger: TGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAGTGCTTTATTGTCTTTCTCCTGGGCTGGATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR GCA 90 bp | CACTTCTGCCCTCATGGCTATCGTAGCATATGTTTCCTAATGCCCTaGCCGTTTGAAGCAGCACTTCCTGGTCTTTGCTATTTAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: HFCPHGYRSICFLMP*PFEAALPGLCYLTA Trigger: AGCTGTTAAATAGCAAAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATTAGGAAACATATGCTACGATAGCCATGAGGGCAGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | GGTGGTTATTCGATGGGATCCAGGAGAGCACCCTTTGGAACACACTaGCTTTTCCTCCTTCAAAAAGTTTCTGCATGGACTCATCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: GGYSMGSRRAPFGTH*LFLLQKVSAWTHLQ Trigger: TTGGAGATGAGTCCATGCAGAAACTTTTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGGGTGCTCTCCTGGATCCCATCGAATAACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | CAGGGCGACAAGAGCTTCATTCTGCATGATTACATGTTCACTAGTTaGCATGGTAACCAGGTGCTTGATGCCACCACTCTGTACAATGGT | + |
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Preference number: 1 (lower is better) Translates to: QGDKSFILHDYMFTS*HGNQVLDATTLYNG Trigger: ACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCAACTAGTGAACATGTAATCATGCAGAATGAAGCTCTTGTCGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTaGCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: WNQEPQEGLLCCLAN*LYSSEKGETVGKEG Trigger: TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR GCA 90 bp | CCCAGGACCCAAATTTGGCAGCTCAAAACTGCCTATGATTATGGCTaGAGTTATCTGATACTCCATTCTGCCCCCTGTATCCTCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: PRTQIWQLKTAYDYG*SYLILHSAPCILFQ Trigger: TTGAAAGAGGATACAGGGGGCAGAATGGAGTATCAGATAACTGCAGCCATAATCATAGGCAGTTTTGAGCTGCCAAATTTGGGTCCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
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| 3UTR CCA 90 bp | CTACCATATGAATACAATTTCCATCGTTCCTGGCAAAATTTGCAATaGCTAATGCCCCAGCCAGCTGCAGCTGGTGGTTATTCGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: LPYEYNFHRSWQNLQ*LMPQPAAAGGYSMG Trigger: TCCCATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCAGGAACGATGGAAATTGTATTCATATGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR CCA 90 bp | TCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAAATTTaGCAGCTCAAAACTGCCTATGATTATGGCTGCAGTTATCTGATA | + |
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Preference number: 1 (lower is better) Translates to: SYETEGLSVVPRTQI*QLKTAYDYGCSYLI Trigger: TATCAGATAACTGCAGCCATAATCATAGGCAGTTTTGAGCTGCCAAATTTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
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| 3UTR GCA 90 bp | CAATGGTACTCAAAAATTAGTAGGACTAACTACGTTAACACCACATaGATCAGACTGCAGAGCAAGGAGGCTAGCAAAGACTCAGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: QWYSKISRTNYVNTT*IRLQSKEASKDSEG Trigger: TCCCTCTGAGTCTTTGCTAGCCTCCTTGCTCTGCAGTCTGATGCATGTGGTGTTAACGTAGTTAGTCCTACTAATTTTTGAGTACCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
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| 3UTR TCA 90 bp | GCACCGTCACGTTCCCGTCTTCTACGTGTCTGTCCAGCAAATCCATaGGTTTTTCTACAATCCCATTGTCTACCATATGAATACAATTTC | + |
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Preference number: 1 (lower is better) Translates to: APSRSRLLRVCPANP*VFLQSHCLPYEYNF Trigger: GAAATTGTATTCATATGGTAGACAATGGGATTGTAGAAAAACTCATGGATTTGCTGGACAGACACGTAGAAGACGGGAACGTGACGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | CACCATTCAACCAAACGCTCTACCAGTTTAGCATTCTTTCCCAGTTaGTCAGCAGCTTCTGCTTGTGCATCTATTAACATTCTTAGCGTT | + |
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Preference number: 1 (lower is better) Translates to: HHSTKRSTSLAFFPS*SAASACASINILSV Trigger: AACGCTAAGAATGTTAATAGATGCACAAGCAGAAGCTGCTGAGCAACTGGGAAAGAATGCTAAACTGGTAGAGCGTTTGGTTGAATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR TCA 90 bp | GCTTGTGCATCTATTAACATTCTTAGCGTTCCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGATTTAAGGAATTTCAAAACCGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ACASINILSVPRSLN*TGGISDLRNFKTVS Trigger: GGAGACGGTTTTGAAATTCCTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGCTAAGAATGTTAATAGATGCACAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR GCA 90 bp | TCATTCTGCATGATTACATGTTCACTAGTTGCCATGGTAACCAGGTaGTTGATGCCACCACTCTGTACAATGGTTTTAATTACATCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SFCMITCSLVAMVTR*LMPPLCTMVLITSF Trigger: AAAAGATGTAATTAAAACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCAACTAGTGAACATGTAATCATGCAGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR TCA 90 bp | TTTGTTTCTAGTTTACCAGTACATTATTATGTAGCTTACTGCATGTaGGGAGCAAGTCAGCATGGAGTACCAAGTTTACATCATCATAGG | + |
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Preference number: 1 (lower is better) Translates to: FVSSLPVHYYVAYCM*GASQHGVPSLHHHR Trigger: CCTATGATGATGTAAACTTGGTACTCCATGCTGACTTGCTCCTCACATGCAGTAAGCTACATAATAATGTACTGGTAAACTAGAAACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR CCA 90 bp | ACTTACCAACACCATAGACTGAAACTGAGAGAAAAGTCTAGACAATaGTACTCAAAAATTAGTAGGACTAACTACGTTAACACCACATGC | + |
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Preference number: 1 (lower is better) Translates to: TYQHHRLKLREKSRQ*YSKISRTNYVNTTC Trigger: GCATGTGGTGTTAACGTAGTTAGTCCTACTAATTTTTGAGTACCATTGTCTAGACTTTTCTCTCAGTTTCAGTCTATGGTGTTGGTAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
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| 3UTR TCA 90 bp | TCCAGCAAATCCATGAGTTTTTCTACAATCCCATTGTCTACCATATaGATACAATTTCCATCGTTCCTGGCAAAATTTGCAATGGCTAAT | + |
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Preference number: 1 (lower is better) Translates to: SSKSMSFSTIPLSTI*IQFPSFLAKFAMAN Trigger: ATTAGCCATTGCAAATTTTGCCAGGAACGATGGAAATTGTATTCATATGGTAGACAATGGGATTGTAGAAAAACTCATGGATTTGCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCTGGGCGGAGCTGGGATaGGCCTGGTGCCAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: AQALTTVPLFGHQRELSVWAELG*AWCQQG Trigger: GCCCTGCTGGCACCAGGCTCATCCCAGCTCCGCCCA...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACAGAAGAAGCAGCTGGATaGAGAACAGTGGAGTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: SSPSLPSTPVTELSLPQTEEAAG*RTVEWA Trigger: CGCCCACTCCACTGTTCTCCATCCAGCTGCTTCTTC...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGTGGAGTGGGCGGAGCTaGGATGAGCCTGGTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TLHYAKKSLCGESWLAAWWSGRS*DEPGAS Trigger: GCTGGCACCAGGCTCATCCCAGCTCCGCCCACTCCA...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACATGCTATGAGGCCATCTaGAGAATGTACTGGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: SSPSLPSTPVTELSLPQTCYEAI*RMYWTG Trigger: GCCAGTCCAGTACATTCTGCAGATGGCCTCATAGCA...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGGGGGAGGAAGGAGCTaGTCCCTCTCAGCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LISPVSKHRRSPQFPYLDGGGRS*SLSAAP Trigger: AGGGGCTGCTGAGAGGGACCAGCTCCTTCCTCCCCC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCATGGGCGGAGCTGGGATaGGCCTGGTGCCAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LTTVPLFGHQRELSVRFSWAELG*AWCQQG Trigger: GCCCTGCTGGCACCAGGCTCATCCCAGCTCCGCCCA...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCACTCAACCTTGGGTGTaGGGAGGAAGGCGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: AQALTTVPLFGHQRELSVTQPWV*GGRRVT Trigger: TGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGT...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGACAGTCATGAGCTTCTCACTGGCGGGATCTGTCCTACCGCACAGCGACCTAATGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KDSHELLTGGICPTAQRPNALPV*SSTSWS Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATT...AGGTCGCTGTGCGGTAGGACAGATCCCGCCAGTGAGAAGCTCATGACTGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR CAA 90 bp | GAAGCCTTACCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATaGTACTTGATCTCCGGGGCACTTCTCTCATCTGCTAGCAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: EALPDPMRAQIRTME*YLISGALLSSASSR Trigger: CCGACTGCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGGTAAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACACAGAAGATTAATGAGTaGGCAGCCATACAGGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SSPSLPSTPVTELSLPQTQKINE*AAIQAF Trigger: AAAAGCCTGTATGGCTGCTCACTCATTAATCTTCTG...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCGGCGAGTCCTGGCTTaGAGCCTGGGAGATTATTGT | + |
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Preference number: 2 (lower is better) Translates to: AQALTTVPLFGHQRELSVRRVLA*SLGDYC Trigger: ACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACAAGGAGCAAGTCAGCATaGAGTACCAAGTTTACATCA | + |
|
Preference number: 2 (lower is better) Translates to: SSPSLPSTPVTELSLPQTRSKSA*STKFTS Trigger: TGATGTAAACTTGGTACTCCATGCTGACTTGCTCCT...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTCTGGACTGGCTACTATaGCTTTTAAAACCGGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AGLNLGCEEEGGSQGIPILDWLL*LLKPAF Trigger: GAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAG...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTCCTGGGAGATTATTGTaGTTCTCAGTGGGAAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIPGRLL*FSVGKW Trigger: CCACTTTCCCACTGAGAACCACAATAATCTCCCAGG...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTACACGCATGCACAAGTaGTGTAGTAGAGAATGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AGLNLGCEEEGGSQGIPITRMHK*CSREWS Trigger: ACTCCATTCTCTACTACATCACTTGTGCATGCGTGT...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 90 bp | TCTCATCTGCTAGCAGTCGGTGTAAGATCTGAACAAGCTGAGCACTaGCGAGATCCTTCTCAGCGGGACCCAGTTCCAAGGCTGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: SHLLAVGVRSEQAEH*RDPSQRDPVPRLLS Trigger: TGATAGCAGCCTTGGAACTGGGTCCCGCTGAGAAGGATCTCGCAAGTGCTCAGCTTGTTCAGATCTTACACCGACTGCTAGCAGATGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR CAA 90 bp | TTACCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATTGTACTaGATCTCCGGGGCACTTCTCTCATCTGCTAGCAGTCGGTGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPDPMRAQIRTMELY*ISGALLSSASSRCK Trigger: CTTACACCGACTGCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR TCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGATGGGCGGAGCTGGGATaGGCCTGGTGCCAGCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LWVETCSDSHVHINYGFRWAELG*AWCQQG Trigger: GCCCTGCTGGCACCAGGCTCATCCCAGCTCCGCCCA...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTATCTGCAGAATGTACTaGACTGGCTACTATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIICRMY*TGYYGF Trigger: AAAGCCATAGTAGCCAGTCCAGTACATTCTGCAGAT...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR CAA 90 bp | GTTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTCTTaGCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSGSDEHTTLCQEES*RRVLACSLGDYCGS Trigger: AGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCAGAAGATTAATGAGTaGGCAGCCATACAGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AASPGLQPGRLLWFSVGKQKINE*AAIQAF Trigger: AAAAGCCTGTATGGCTGCTCACTCATTAATCTTCTG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTACCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATTGTACTTGATCCCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: ALPDPMRAQIRTMELYLIPRSLN*TGGISD Trigger: ATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGG...GATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGGTAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACATGGAGTGGGCGGAGCTaGGATGAGCCTGGTGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IWTVLCNISPLIQPRRKTWSGRS*DEPGAS Trigger: GCTGGCACCAGGCTCATCCCAGCTCCGCCCACTCCA...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGATCTGCAGAATGTACTaGACTGGCTACTATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AASPGLQPGRLLWFSVGKICRMY*TGYYGF Trigger: AAAGCCATAGTAGCCAGTCCAGTACATTCTGCAGAT...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGACACGCATGCACAAGTaGTGTAGTAGAGAATGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLHYAKKSLCGESWLAAWTRMHK*CSREWS Trigger: ACTCCATTCTCTACTACATCACTTGTGCATGCGTGT...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGCTTTAGAGACATGCTaGCAATGCTGGCTAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LISPVSKHRRSPQFPYLDALETC*QCWLAD Trigger: ATCAGCTAGCCAGCATTGTCAGCATGTCTCTAAAGC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGCCAAGAAGAGTCTTTaGGGCGAGTCCTGGCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTTVPLFGHQRELSVRFSAKKSL*GESWLA Trigger: TGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGC...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCGAGCACACTACATTATaGCAAGAAGAGTCTTTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: AQALTTVPLFGHQRELSVEHTTL*QEESLR Trigger: CCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTC...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | CGTCACGTTCCCGTCTTCTACGTGTCTGTCCAGCAAATCCATGAGTTTTTCTACACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RHVPVFYVSVQQIHEFFYTCLVN*TSALMA Trigger: AGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGT...GTAGAAAAACTCATGGATTTGCTGGACAGACACGTAGAAGACGGGAACGTGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATCAGGACCATGGAATTGTACTTGATCTCCGGGGCACTTCTCTCATCTGCCGTCGTCCTCTTTGTTaGTATCCACCTTCTGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ADQDHGIVLDLRGTSLICRRPLC*YPPSVG Trigger: TCCAACAGAAGGTGGATAGCAACAAAGAGGACGACG...GCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTTGATTTACTGTGTCGGATGAGGGCAGAGAGCAGTCTGTTTGATTCGCCCAATGCCCCAGCCAGCTaGAGCTGGTGGTTATTCGAT | + |
|
Preference number: 2 (lower is better) Translates to: SFDLLCRMRAESSLFDSPNAPAS*SWWLFD Trigger: ATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATT...GGGCGAATCAAACAGACTGCTCTCTGCCCTCATCCGACACAGTAAATCAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTCTGTTTGATTCGCCCATCACGCCGGCATGATCTTTGGCTTCACACCATTGCATTCTTTCCCAGTTaGTCAGCAGCTTCTGCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: AVCLIRPSRRHDLWLHTIAFFPS*SAASAC Trigger: ACAAGCAGAAGCTGCTGAGCAACTGGGAAAGAATGC...AATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGGCGAATCAAACAGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTGAAGAAGCAGCTGGATaGAGAACAGTGGAGTGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: TGLATMAFKTGLPLFRQAEEAAG*RTVEWA Trigger: CGCCCACTCCACTGTTCTCCATCCAGCTGCTTCTTC...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTGGAAGGAAGGAATATTaGACCTATTCAAGTTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIGRKEY*TYSSLG Trigger: ACCTAAACTTGAATAGGTCCAATATTCCTTCCTTCC...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGGGGGGAGGAAGGAGCTaGTCCCTCTCAGCAGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TVLCNISPLIQPRRKTIKGGGRS*SLSAAP Trigger: AGGGGCTGCTGAGAGGGACCAGCTCCTTCCTCCCCC...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGAGACACTCTACCAAACCTGCTTCAACCAGCTGCAGCTTAATAGCATCATGTGCACCACCTGCTTaGTCAACTGCACTTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SRRHSTKPASTSCSLIASCAPPA*STALLP Trigger: GGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACA...TGATGCTATTAAGCTGCAGCTGGTTGAAGCAGGTTTGGTAGAGTGTCTCCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGACCATGGAATTGTACTTGATCTCCGGGGCACTTCTCTCATCTGCTAGCCGCCGGCATGATCTTTaGCTTCACACCATTCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: IRTMELYLISGALLSSASRRHDL*LHTIQP Trigger: TGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCG...GCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR CAA 90 bp | ATGAGGTCAGAAGCAGTTTTAAGCTCGGCAACGTCGTCCTCTTTGTaGCTATCCACCTTCTGTTGGACGATCTCTAGGAGACACTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: MRSEAVLSSATSSSL*LSTFCWTISRRHST Trigger: GGTAGAGTGTCTCCTAGAGATCGTCCAACAGAAGGTGGATAGCAACAAAGAGGACGACGTTGCCGAGCTTAAAACTGCTTCTGACCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAGCACTTCCTGGTCTTTaGTATTTAACAGCTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: EYILLLRDRGTECGSQDPALPGL*YLTAVP Trigger: TGGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGC...TGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR CCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCAGAATGTACTGGACTaGCTACTATGGCTTTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AASPGLQPGRLLWFSVGKQNVLD*LLWLLK Trigger: TTTTAAAAGCCATAGTAGCCAGTCCAGTACATTCTG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTGTAGCTTACTGCATGTaGGGAGCAAGTCAGCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: TGLATMAFKTGLPLFRQAVAYCM*GASQHG Trigger: TCCATGCTGACTTGCTCCTCACATGCAGTAAGCTAC...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCGCTTTAGAGACATGCTaGCAATGCTGGCTAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFALETC*QCWLAD Trigger: ATCAGCTAGCCAGCATTGTCAGCATGTCTCTAAAGC...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | GACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAACGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: DSEGHYTGTEKSFYQEMERDTSR*VLHCGS Trigger: ACTGCCACAATGCAGCACTCACCGAGATGTGTCTCG...TTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| 3UTR-3UTR GCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGTGTTGCTTGGCAAACTaGCTATATAGTTCAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AASPGLQPGRLLWFSVGKCCLAN*LYSSEK Trigger: TTTTTCTGAACTATATAGGCAGTTTGCCAAGCAACA...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTGAAGAAGCAGCTGGATaGAGAACAGTGGAGTGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SVKSKVRFRERRDTGISCEEAAG*RTVEWA Trigger: CGCCCACTCCACTGTTCTCCATCCAGCTGCTTCTTC...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR-3UTR TCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAGCCATACAGGCTTTTTaGTCGCTGTGCTTCCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IWTVLCNISPLIQPRRKTAIQAF*SLCFPS Trigger: GCTGGGGAAGCACAGCGATCAAAAAGCCTGTATGGC...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTTGATTTACTGTGTCGGATGAGGGCAGAGAGCAGTCTGTTTGATTCGCCCGTCAATTACAATCTGTaGACCACCTGCTTGGTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFDLLCRMRAESSLFDSPVNYNL*TTCLVN Trigger: GTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC...GGGCGAATCAAACAGACTGCTCTCTGCCCTCATCCGACACAGTAAATCAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGGACCATGGAATTGTACTTGATCTCCGGGGCACTTCTCTCATCTGCTAGCCCCTTTGGAACACACTaGCTTTTCCTCCTTCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IRTMELYLISGALLSSASPFGTH*LFLLQK Trigger: TTTTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGGG...GCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGGCAAGATCCAAAGTaGTTCAGTATGCCAGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFRQDPK*FSMPGF Trigger: AAACCCTGGCATACTGAACCACTTTGGATCTTGCCT...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGTGGGAAAGTGGAGGTaGAGAACTCTAACAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: LTTVPLFGHQRELSVRFSVGKWR*RTLTMT Trigger: AGTCATTGTTAGAGTTCTTCACCTCCACTTTCCCAC...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | TGCCATGGTAACCAGGTGCTTGATGCCACCACTCTGTACAATGGTTTTAATTACTCAAAACCGTCTCCGTaGCACCAGCTGATAACATCT | + |
|
Preference number: 2 (lower is better) Translates to: CHGNQVLDATTLYNGFNYSKPSP*HQLITS Trigger: AGATGTTATCAGCTGGTGTCACGGAGACGGTTTTGA...GTAATTAAAACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGGTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTGAAGGTTTGCTGTGTTaGTTGGCAAACTGCCTATAT | + |
|
Preference number: 2 (lower is better) Translates to: TWWWLVAVTSTLHYAKKSEGLLC*LANCLY Trigger: ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTC...ACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCACCAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGGTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTAACTCTAACAATGACTaGTATGAGGCCATCTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TWWWLVAVTSTLHYAKKSNSNND*YEAICR Trigger: TCTGCAGATGGCCTCATAGCAGTCATTGTTAGAGTT...ACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCACCAAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGGCCAAGAAGAGTCTTTaGGGCGAGTCCTGGCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TVLCNISPLIQPRRKTIKAKKSL*GESWLA Trigger: TGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGC...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGAGCACACTACATTATaGCAAGAAGAGTCTTTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LTTVPLFGHQRELSVRFSEHTTL*QEESLR Trigger: CCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTC...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCATCTGCAGAATGTACTaGACTGGCTACTATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFICRMY*TGYYGF Trigger: AAAGCCATAGTAGCCAGTCCAGTACATTCTGCAGAT...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGACCATGGAATTGTACTTGATCTCCGGGGCACTTCTCTCATCTGCTAGCCACAGCGACCTTAAATaGTCAATTACAATCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IRTMELYLISGALLSSASHSDLK*SITICA Trigger: TGCACAGATTGTAATTGACCATTTAAGGTCGCTGTG...GCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR TCA 90 bp | ACAGATGTATCATTCTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAACACAAAAGACAGTCATaGGCTTCTCACTGGCGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TDVSFWGVCVSSTLPFQQHKRQS*ASHWRD Trigger: ATCCCGCCAGTGAGAAGCTCATGACTGTCTTTTGTG...TTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAGAATGATACATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTAGCCTCAGGAAGGTTTaGTGTGTTGCTTGGCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: SVKSKVRFRERRDTGISCSLRKV*CVAWQT Trigger: AGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCT...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 90 bp | CTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGAATATaGGACCTATTCAAGTTTAGGTGGTACAGGCCTGACGTTGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LYSSEKGETVGKEGI*DLFKFRWYRPDVGR Trigger: TCTGCCAACGTCAGGCCTGTACCACCTAAACTTGAATAGGTCCAATATTCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAAAAACACTCAGGAAACTAATAAGCTGGGCCTaGAGGGAATCATTCTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: LGCVCVFNITLSTKTLRKLISWA*RESFSL Trigger: CAATGAGAATGATTCCCTTCAGGCCCAGCTTATTAG...TTTCCTGAGTGTTTTTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACACTGGACTGGCTACTATaGCTTTTAAAACCGGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IWTVLCNISPLIQPRRKTLDWLL*LLKPAF Trigger: GAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAG...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACACCTGGGAGATTATTGTaGTTCTCAGTGGGAAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: IWTVLCNISPLIQPRRKTPGRLL*FSVGKW Trigger: CCACTTTCCCACTGAGAACCACAATAATCTCCCAGG...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACTCCATTCTGCCCCCTGTATCCTCTTTCAAACAAATTGCTTCTTCTTTTTACTGGTGGTTATTCGATaGGATCCAGGAGAGCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: ILHSAPCILFQTNCFFFLLVVIR*DPGEHP Trigger: AGGGTGCTCTCCTGGATCCCATCGAATAACCACCAG...TAAAAAGAAGAAGCAATTTGTTTGAAAGAGGATACAGGGGGCAGAATGGAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTAGGAGCAAGTCAGCATaGAGTACCAAGTTTACATCA | + |
|
Preference number: 2 (lower is better) Translates to: SVKSKVRFRERRDTGISCRSKSA*STKFTS Trigger: TGATGTAAACTTGGTACTCCATGCTGACTTGCTCCT...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTAACCAGGTGCTTGATGCCACCACTCTGTACAATGGTTTTAATTACATCTCCTTCAAAAAGTTTCTaGATGGACTCATCTCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: MVTRCLMPPLCTMVLITSPSKSF*MDSSPS Trigger: GCTTGGAGATGAGTCCATGCAGAAACTTTTTGAAGG...AGATGTAATTAAAACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGGAAGGTTTGCTGTGTTaGTTGGCAAACTGCCTATAT | + |
|
Preference number: 2 (lower is better) Translates to: TVLCNISPLIQPRRKTIKEGLLC*LANCLY Trigger: ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTC...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTCAGAATGTACTGGACTaGCTACTATGGCTTTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVKSKVRFRERRDTGISCQNVLD*LLWLLK Trigger: TTTTAAAAGCCATAGTAGCCAGTCCAGTACATTCTG...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGGGAAGGAAGGAATATTaGACCTATTCAAGTTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TVLCNISPLIQPRRKTIKGRKEY*TYSSLG Trigger: ACCTAAACTTGAATAGGTCCAATATTCCTTCCTTCC...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGTGTTGCTTGGCAAACTaGCTATATAGTTCAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVLCNISPLIQPRRKTIKCCLAN*LYSSEK Trigger: TTTTTCTGAACTATATAGGCAGTTTGCCAAGCAACA...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CCA 72 bp | GAGATACAGGTATCTCCTGTCGGGGGAGGAAGGAGCTaGTCCCTCTCAGCAGCCCCTCACTGCCCTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: EIQVSPVGGGRS*SLSAAPHCPPL Trigger: GAGTGGAGGGCAGTGAGGGGCTGCTGAGAGGGACCAGCTCCTTCCTCCCCCGACAGGAGATACCTGTATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | GGGATGGCTAGATTCCTGAGGGCACTTAGTGCGGCGTaGTGCACCGTCACGTTCCCGTCTTCTACGTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GMARFLRALSAA*CTVTFPSSTCL Trigger: CAGACACGTAGAAGACGGGAACGTGACGGTGCAGCACGCCGCACTAAGTGCCCTCAGGAATCTAGCCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | ATGGCTAGATTCCTGAGGGCACTTAGTGCGGCGTGCTaGACCGTCACGTTCCCGTCTTCTACGTGTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: MARFLRALSAAC*TVTFPSSTCLS Trigger: GGACAGACACGTAGAAGACGGGAACGTGACGGTGCAGCACGCCGCACTAAGTGCCCTCAGGAATCTAGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | TGCGAGATCCTTCTCAGCGGGACCCAGTTCCAAGGCTaGTATCAGTGCCAGGGCGACAAGAGCTTCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CEILLSGTQFQG*YQCQGDKSFIL Trigger: CAGAATGAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGTCCCGCTGAGAAGGATCTCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACCAGCAGGACTCAACCTaGGGTGTGAGGAGGAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LISPVSKHRRSPQFPYLDQQDST*GVRRKA Trigger: CGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGCTG...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CCA 72 bp | TTTGCAATGGCTAATGCCCCAGCCAGCTGCAGCTGGTaGTTATTCGATGGGATCCAGGAGAGCACCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FAMANAPASCSW*LFDGIQESTLW Trigger: CCAAAGGGTGCTCTCCTGGATCCCATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATTAGCCATTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | GTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATaGCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VVVSGSDEHTTL*QEESLRRVLAC Trigger: GCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR TCA 72 bp | CTGCTAAATTCCCGAACGCAACGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGTGAATGCCCAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLNSRTQRDTSR*VLHCGSECPVA Trigger: AGCTACTGGGCATTCACTGCCACAATGCAGCACTCACCGAGATGTGTCTCGTTGCGTTCGGGAATTTAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR TCA 72 bp | TTTACTGTGTCGGATGAGGGCAGAGAGCAGTCTGTTTaGTTCGCCCATCACGCCGGCATGATCTTTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTVSDEGREQSV*FAHHAGMIFGF Trigger: GAAGCCAAAGATCATGCCGGCGTGATGGGCGAATCAAACAGACTGCTCTCTGCCCTCATCCGACACAGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR CCA 72 bp | CTGGCGGGATCTGTCCTACCGCACAGCGACCTTAAATaGTCAATTACAATCTGTGCACCACCTGCTTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAGSVLPHSDLK*SITICAPPAWS Trigger: TGACCAAGCAGGTGGTGCACAGATTGTAATTGACCATTTAAGGTCGCTGTGCGGTAGGACAGATCCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR CCA 72 bp | AAATTTGCAATGGCTAATGCCCCAGCCAGCTGCAGCTaGTGGTTATTCGATGGGATCCAGGAGAGCACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KFAMANAPASCS*WLFDGIQESTL Trigger: AAGGGTGCTCTCCTGGATCCCATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATTAGCCATTGCAAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTGGGAAGGAAGGAATATaGGACCTATTCAAGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIGKEGI*DLFKFR Trigger: CCTAAACTTGAATAGGTCCAATATTCCTTCCTTCCC...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGAGCCTCAGGAAGGTTaGCTGTGTTGCTTGGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LISPVSKHRRSPQFPYLDEPQEG*LCCLAN Trigger: GTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGCTCTAAGAACTCACTaGGTGGTGGTTAGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LISPVSKHRRSPQFPYLDALRTH*VVVSGS Trigger: ACTGCCACTAACCACCACCAAGTGAGTTCTTAGAGC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAGATCAGGACCATGGAATTGTACTTGATCTCCGGGGCACTTCTCTCATCTGCATGGTAACCAGGTGCTaGATGCCACCACTCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: ADQDHGIVLDLRGTSLICMVTRC*MPPLCT Trigger: TGTACAGAGTGGTGGCATCAAGCACCTGGTTACCAT...GCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR TCA 72 bp | TCTTTGCTTTATTTACAACTGGGATGGCTAGATTCCTaGGGGCACTTAGTGCGGCGTGCTGCACCGTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLYLQLGWLDS*GHLVRRAAPSR Trigger: ACGTGACGGTGCAGCACGCCGCACTAAGTGCCCTCAGGAATCTAGCCATCCCAGTTGTAAATAAAGCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR TCA 72 bp | GAGAGCAGTCTGTTTGATTCGCCCATCACGCCGGCATaGTCTTTGGCTTCACACCATTCAACCAAACGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ESSLFDSPITPA*SLASHHSTKRS Trigger: AGAGCGTTTGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGGCGAATCAAACAGACTGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR TCA 72 bp | TCAGGAGTACATACTGCTCTTACGAGACAGAGGGACTaGGTGTGGTTCCCAGGACCCAAATTTGGCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGVHTALTRQRD*VWFPGPKFGSS Trigger: TGAGCTGCCAAATTTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| 3UTR GCA 72 bp | GTGACGAGCACACTACATTATGCCAAGAAGAGTCTTTaGGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATT | + |
|
Preference number: 3 (lower is better) Translates to: VTSTLHYAKKSL*GESWLAAWEII Trigger: AATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGTGCTCGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | AAAAGTAGAGCTGGCTCAGCAGTCAGGAGTACATACTaGTCTTACGAGACAGAGGGACTGAGTGTGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KSRAGSAVRSTY*SYETEGLSVVP Trigger: GGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTCCTGACTGCTGAGCCAGCTCTACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGCCATACAGGCTTTTaGATCGCTGTGCTTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFSHTGF*IAVLPQ Trigger: CTGGGGAAGCACAGCGATCAAAAAGCCTGTATGGCT...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTGCGGCGAGTCCTGGCTaGCAGCCTGGGAGATTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SVKSKVRFRERRDTGISCAASPG*QPGRLL Trigger: CAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR TCA 72 bp | TGCTATAGTTCATCAGCATGCCACAAAAGACAGTCATaGGCTTCTCACTGGCGGGATCTGTCCTACCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: CYSSSACHKRQS*ASHWRDLSYRT Trigger: TGTGCGGTAGGACAGATCCCGCCAGTGAGAAGCTCATGACTGTCTTTTGTGGCATGCTGATGAACTATAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | GTAGGACTAACTACGTTAACACCACATGCATCAGACTaGAGAGCAAGGAGGCTAGCAAAGACTCAGAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VGLTTLTPHASD*RARRLAKTQRD Trigger: GTCCCTCTGAGTCTTTGCTAGCCTCCTTGCTCTGCAGTCTGATGCATGTGGTGTTAACGTAGTTAGTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| 3UTR CCA 72 bp | CTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTaGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LHYAKKSLCGES*LAAWEIIVVLS Trigger: ACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CCA 72 bp | GCAACGTCGTCCTCTTTGTTGCTATCCACCTTCTGTTaGACGATCTCTAGGAGACACTCTACCAAACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATSSSLLLSTFC*TISRRHSTKPA Trigger: AGCAGGTTTGGTAGAGTGTCTCCTAGAGATCGTCCAACAGAAGGTGGATAGCAACAAAGAGGACGACGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGGTCCTGCTGCATTCTTaGTTTCTAGTTTACCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLHYAKKSLCGESWLAAWVLLHS*FLVYQY Trigger: GTACTGGTAAACTAGAAACAAAGAATGCAGCAGGAC...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCGGGAAGGAAGGAATATaGGACCTATTCAAGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AQALTTVPLFGHQRELSVGKEGI*DLFKFR Trigger: CCTAAACTTGAATAGGTCCAATATTCCTTCCTTCCC...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTCTGTTTGATTCGCCCATCACGCCGGCATGATCTTTGGCTTCACACCATTAGCACTTCCTGGTCTTaGCTATTTAACAGCTGTACC | + |
|
Preference number: 3 (lower is better) Translates to: AVCLIRPSRRHDLWLHTISTSWS*LFNSCT Trigger: GGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGCT...AATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGGCGAATCAAACAGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | TCTAGGAGACACTCTACCAAACCTGCTTCAACCAGCTaGAGCTTAATAGCATCATTCTCTGCCAATGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRRHSTKPASTS*SLIASFSANGA Trigger: AGCGCCATTGGCAGAGAATGATGCTATTAAGCTGCAGCTGGTTGAAGCAGGTTTGGTAGAGTGTCTCCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACATAGCAGTTCTTCCATaGGTACTGGAACATTACACG | + |
|
Preference number: 3 (lower is better) Translates to: LISPVSKHRRSPQFPYLDIAVLP*VLEHYT Trigger: CGTGTAATGTTCCAGTACCAATGGAAGAACTGCTAT...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGGGAAGGAAGGAATATaGGACCTATTCAAGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LISPVSKHRRSPQFPYLDGKEGI*DLFKFR Trigger: CCTAAACTTGAATAGGTCCAATATTCCTTCCTTCCC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCGGAAGGTTTGCTGTGTaGCTTGGCAAACTGCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFGRFAV*LGKLPI Trigger: TATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCC...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | GTCAATTACAATCTGTGCACCACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCTATCGTAGCATATGTT | + |
|
Preference number: 3 (lower is better) Translates to: VNYNLCTTCLVN*TSALMAIVAYV Trigger: AACATATGCTACGATAGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR CCA 72 bp | GAATACAATTTCCATCGTTCCTGGCAAAATTTGCAATaGCTAATGCCCCAGCCAGCTGCAGCTGGTGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: EYNFHRSWQNLQ*LMPQPAAAGGY Trigger: ATAACCACCAGCTGCAGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCAGGAACGATGGAAATTGTATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATATAGCAGTTCTTCCATaGGTACTGGAACATTACACG | + |
|
Preference number: 3 (lower is better) Translates to: WNQEPQEGLLCCLANCLYIAVLP*VLEHYT Trigger: CGTGTAATGTTCCAGTACCAATGGAAGAACTGCTAT...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATGTCCTGCTGCATTCTTaGTTTCTAGTTTACCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: WNQEPQEGLLCCLANCLYVLLHS*FLVYQY Trigger: GTACTGGTAAACTAGAAACAAAGAATGCAGCAGGAC...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAGAGCCTCAGGAAGGTTaGCTGTGTTGCTTGGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IWTVLCNISPLIQPRRKTEPQEG*LCCLAN Trigger: GTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTC...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR TCA 72 bp | TACGCTCCACTCACATTAAAATCCATGTTTCAGCACTaGGCCCCTGTACCACTGTCGCTTAAAGATGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: YAPLTLKSMFQH*APVPLSLKDGI Trigger: GATTCCATCTTTAAGCGACAGTGGTACAGGGGCTCAGTGCTGAAACATGGATTTTAATGTGAGTGGAGCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR TCA 72 bp | CACCGAACAAACATCAAGGACGCTTTAGAGACATGCTaGCAATGCTGGCTAGCTGATGGAAGTTCTAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: HRTNIKDALETC*QCWLADGSSRC Trigger: ACATCTAGAACTTCCATCAGCTAGCCAGCATTGTCAGCATGTCTCTAAAGCGTCCTTGATGTTTGTTCGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | AAGAGCTTCATTCTGCATGATTACATGTTCACTAGTTaGCATGGTAACCAGGTGCTTGATGCCACCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSFILHDYMFTS*HGNQVLDATTL Trigger: CAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCAACTAGTGAACATGTAATCATGCAGAATGAAGCTCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | AGATGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTaGTTGGCAAACTGCCTATATAGTTCAGAAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RWNQEPQEGLLC*LANCLYSSEKG Trigger: TCCTTTTTCTGAACTATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | CAAATTTGGCAGCTCAAAACTGCCTATGATTATGGCTaGAGTTATCTGATACTCCATTCTGCCCCCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: QIWQLKTAYDYG*SYLILHSAPCI Trigger: GATACAGGGGGCAGAATGGAGTATCAGATAACTGCAGCCATAATCATAGGCAGTTTTGAGCTGCCAAATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| 3UTR CCA 72 bp | GGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTaGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GIRSLRKVCCVA*QTAYIVQKKEK Trigger: TTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR-3UTR CAA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAGGAAGGTTTGCTGTGTaGCTTGGCAAACTGCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: IWTVLCNISPLIQPRRKTGRFAV*LGKLPI Trigger: TATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCC...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | ACCAAACGCTCTACCAGTTTAGCATTCTTTCCCAGTTaGTCAGCAGCTTCTGCTTGTGCATCTATTAACATT | + |
|
Preference number: 3 (lower is better) Translates to: TKRSTSLAFFPS*SAASACASINI Trigger: AATGTTAATAGATGCACAAGCAGAAGCTGCTGAGCAACTGGGAAAGAATGCTAAACTGGTAGAGCGTTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR GCA 72 bp | TCAAAAATTAGTAGGACTAACTACGTTAACACCACATaGATCAGACTGCAGAGCAAGGAGGCTAGCAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKISRTNYVNTT*IRLQSKEASKD Trigger: GTCTTTGCTAGCCTCCTTGCTCTGCAGTCTGATGCATGTGGTGTTAACGTAGTTAGTCCTACTAATTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGGGAAGGTTTGCTGTGTaGCTTGGCAAACTGCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: TVLCNISPLIQPRRKTIKGRFAV*LGKLPI Trigger: TATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCC...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | AGCAGTTCTTCCATTGGTACTGGAACATTACACGCATaGACAAGTGATGTAGTAGAGAATGGAGTTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSSIGTGTLHA*TSDVVENGVEE Trigger: TTCTTCAACTCCATTCTCTACTACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CCA 72 bp | ACAAATCGGAATCTAAAGTACAGGCAAGATCCAAAGTaGTTCAGTATGCCAGGGTTTCTTTTAACTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TNRNLKYRQDPK*FSMPGFLLTPS Trigger: GGAAGGAGTTAAAAGAAACCCTGGCATACTGAACCACTTTGGATCTTGCCTGTACTTTAGATTCCGATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR GCA 72 bp | ATGATTACATGTTCACTAGTTGCCATGGTAACCAGGTaGTTGATGCCACCACTCTGTACAATGGTTTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: MITCSLVAMVTR*LMPPLCTMVLI Trigger: AATTAAAACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCAACTAGTGAACATGTAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR TCA 72 bp | AGTTTACCAGTACATTATTATGTAGCTTACTGCATGTaGGGAGCAAGTCAGCATGGAGTACCAAGTTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: SLPVHYYVAYCM*GASQHGVPSLH Trigger: ATGTAAACTTGGTACTCCATGCTGACTTGCTCCTCACATGCAGTAAGCTACATAATAATGTACTGGTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR TCA 72 bp | TCTATTAACATTCTTAGCGTTCCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGATTTAAGGAATTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SINILSVPRSLN*TGGISDLRNFK Trigger: TTTGAAATTCCTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGCTAAGAATGTTAATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR TCA 72 bp | TCCATGAGTTTTTCTACAATCCCATTGTCTACCATATaGATACAATTTCCATCGTTCCTGGCAAAATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SMSFSTIPLSTI*IQFPSFLAKFA Trigger: TGCAAATTTTGCCAGGAACGATGGAAATTGTATTCATATGGTAGACAATGGGATTGTAGAAAAACTCATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| 3UTR CCA 72 bp | CACCATAGACTGAAACTGAGAGAAAAGTCTAGACAATaGTACTCAAAAATTAGTAGGACTAACTACGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: HHRLKLREKSRQ*YSKISRTNYVN Trigger: GTTAACGTAGTTAGTCCTACTAATTTTTGAGTACCATTGTCTAGACTTTTCTCTCAGTTTCAGTCTATGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| 3UTR CAA 72 bp | AGCTCAGCCTCCCTCAGACATCAGCAGGACTCAACCTaGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSASLRHQQDST*GVRRKAGHRES Trigger: GGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGCTGATGTCTGAGGGAGGCTGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCAATTTACTGTGTCGGATaGGGGCAGAGAGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPIYCVG*GQRAVC Trigger: ACAGACTGCTCTCTGCCCTCATCCGACACAGTAAAT...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCACACAAAAGACAGTCATaGGCTTCTCACTGGCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPHKRQS*ASHWRD Trigger: ATCCCGCCAGTGAGAAGCTCATGACTGTCTTTTGTG...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCAGCATTCTTTCCCAGTTaGTCAGCAGCTTCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPAFFPS*SAASAC Trigger: ACAAGCAGAAGCTGCTGAGCAACTGGGAAAGAATGC...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCACTAATAAGCTGGGCCTaGAGGGAATCATTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPLISWA*RESFSL Trigger: CAATGAGAATGATTCCCTTCAGGCCCAGCTTATTAG...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCACCTGCTTCAACCAGCTaGAGCTTAATAGCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPPASTS*SLIASF Trigger: GAATGATGCTATTAAGCTGCAGCTGGTTGAAGCAGG...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | CTAATGCCCCAGCCAGCTGCAGCTGGTGGTTATTCGATGGGATCCAGGAGAGCATGGCTACTTCTGCTATaGTGTCGGCTACTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMPQPAAAGGYSMGSRRAWLLLL*CRLLWL Trigger: CAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCA...TGCTCTCCTGGATCCCATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR TCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTTCAAAACCGTCTCCGTaGCACCAGCTGATAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLNLGCEEEGGSQGIPISKPSP*HQLITS Trigger: AGATGTTATCAGCTGGTGTCACGGAGACGGTTTTGA...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGCCCATCACGCCGGCATaGTCTTTGGCTTCACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLHYAKKSLCGESWLAAWPITPA*SLASHH Trigger: ATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGG...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGATTTACTGTGTCGGATaGGGGCAGAGAGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AASPGLQPGRLLWFSVGKIYCVG*GQRAVC Trigger: ACAGACTGCTCTCTGCCCTCATCCGACACAGTAAAT...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAAATTTGCGGCTACTTTGGCTGTaGAGGAGGCCTGTGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLRDRGTECGSQDPNLRLLWL*RRPVAS Trigger: TGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCG...CAAATTTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCACCTTCAAAAAGTTTCTaGATGGACTCATCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPPSKSF*MDSSPS Trigger: GCTTGGAGATGAGTCCATGCAGAAACTTTTTGAAGG...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCGCCAGCTGCAGCTGGTaGTTATTCGATGGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVASCSW*LFDGIQ Trigger: CTGGATCCCATCGAATAACCACCAGCTGCAGCTGGC...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTTGGCAAAATTTGCAATaGCTAATGCCCCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIWQNLQ*LMPQPA Trigger: AGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCA...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCGCCGGCATGATCTTTaGCTTCACACCATTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AASPGLQPGRLLWFSVGKRRHDL*LHTIQP Trigger: TGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGTGTGCACCACCTGCTTaGTCAACTGCACTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHYAKKSLCGESWLAAWCAPPA*STALLP Trigger: GGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACA...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | CCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATaGTACTTGATCTCCGGGGCACTTCTCTCATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDPMRAQIRTME*YLISGALLSSA Trigger: AGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCAGCTGTACCAGTGGTaGAATCAATCCAGCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AASPGLQPGRLLWFSVGKQLYQW*NQSSIY Trigger: GTAGATGCTGGATTGATTTCACCACTGGTACAGCTG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACATGTCCAGCAAATCCATaGGTTTTTCTACAATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSLPSTPVTELSLPQTCPANP*VFLQSH Trigger: ATGGGATTGTAGAAAAACTCATGGATTTGCTGGACA...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCGCGTTCCCAGGAGTTTaGACTGAACTGGGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVAFPGV*TELGAF Trigger: AAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGC...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTCCTGCTTCAACCAGCTaGAGCTTAATAGCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIPASTS*SLIASF Trigger: GAATGATGCTATTAAGCTGCAGCTGGTTGAAGCAGG...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCGTCGTCCTCTTTGTTaGTATCCACCTTCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AASPGLQPGRLLWFSVGKRRPLC*YPPSVG Trigger: TCCAACAGAAGGTGGATAGCAACAAAGAGGACGACG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAATGCCCCAGCCAGCTaGAGCTGGTGGTTATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVNAPAS*SWWLFD Trigger: ATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATT...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GAGTACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAAATGCCCCAGCCAGCTaGAGCTGGTGGTTATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: EYILLLRDRGTECGSQDPNAPAS*SWWLFD Trigger: ATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATT...TGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCAGAGTTTGAACTGAACTaGGGGCATTTCAGATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSWMENSGVGGAGMSLVPEFELN*GHFRFK Trigger: CTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTC...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACACATGACTTCGAAGTTTaGAGACAACATCTAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSLPSTPVTELSLPQTHDFEV*RQHLER Trigger: CCTTTCTAGATGTTGTCTCCAAACTTCGAAGTCATG...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | CCCATGAGAGCGCAGATCAGGACCATGGAATTGTACTaGATCTCCGGGGCACTTCTCTCATCTGCTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PMRAQIRTMELY*ISGALLSSASS Trigger: ACTGCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCATTTACTGTGTCGGATaGGGGCAGAGAGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVIYCVG*GQRAVC Trigger: ACAGACTGCTCTCTGCCCTCATCCGACACAGTAAAT...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCACAAAAGACAGTCATaGGCTTCTCACTGGCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVHKRQS*ASHWRD Trigger: ATCCCGCCAGTGAGAAGCTCATGACTGTCTTTTGTG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTGCACTTCCTGGTCTTTaGTATTTAACAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIALPGL*YLTAVP Trigger: TGGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGC...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATAATGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WNQEPQEGLLCCLANCLYNALPV*SSTSWS Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATT...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACTTGGTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTAATGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWWWLVAVTSTLHYAKKSNALPV*SSTSWS Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATT...ACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCACCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATCGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WNQEPQEGLLCCLANCLYRDTSR*VLHCGS Trigger: ACTGCCACAATGCAGCACTCACCGAGATGTGTCTCG...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCTCAAAACCGTCTCCGTaGCACCAGCTGATAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVSKPSP*HQLITS Trigger: AGATGTTATCAGCTGGTGTCACGGAGACGGTTTTGA...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGTCAAAACCGTCTCCGTaGCACCAGCTGATAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TLHYAKKSLCGESWLAAWSKPSP*HQLITS Trigger: AGATGTTATCAGCTGGTGTCACGGAGACGGTTTTGA...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCCCCATCACGCCGGCATaGTCTTTGGCTTCACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFPITPA*SLASHH Trigger: ATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGG...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGTACATGTTCACTAGTTaGCATGGTAACCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AASPGLQPGRLLWFSVGKYMFTS*HGNQVL Trigger: AAGCACCTGGTTACCATGGCAACTAGTGAACATGTA...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATGCCAGCTGCAGCTGGTaGTTATTCGATGGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WNQEPQEGLLCCLANCLYASCSW*LFDGIQ Trigger: CTGGATCCCATCGAATAACCACCAGCTGCAGCTGGC...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCTGGCAAAATTTGCAATaGCTAATGCCCCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVWQNLQ*LMPQPA Trigger: AGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCA...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR CAA 72 bp | ATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTaGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IMPRRVFAASPG*QPGRLLWFSVG Trigger: TCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| 3UTR CAA 72 bp | GTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTaGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSKHRRSPQFPY*DIRGNCQSGFH Trigger: GTGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTAATGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQANALPV*SSTSWS Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATT...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR TCA 90 bp | AAAGTAGAGCTGGCTCAGCAGTCAGGAGTACATACTGCTCTTACGAGACAGAGGATTTACTGTGTCGGATaGGGGCAGAGAGCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVELAQQSGVHTALTRQRIYCVG*GQRAVC Trigger: ACAGACTGCTCTCTGCCCTCATCCGACACAGTAAAT...CCTCTGTCTCGTAAGAGCAGTATGTACTCCTGACTGCTGAGCCAGCTCTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
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| CDS-3UTR TCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCTAATAAGCTGGGCCTaGAGGGAATCATTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVLISWA*RESFSL Trigger: CAATGAGAATGATTCCCTTCAGGCCCAGCTTATTAG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTCGGCTACTTTGGCTGTaGAGGAGGCCTGTGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCRLLWL*RRPVAS Trigger: TGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCG...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGACGGCTACTTTGGCTGTaGAGGAGGCCTGTGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRGTLHWDRKVILPRNGRLLWL*RRPVAS Trigger: TGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCG...TCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTATTTTTGGCTACTTCTaGTATGATGTCGGCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIIFGYF*YDVGYF Trigger: AAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAAT...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTCAAGGCTGCTATCAGTaGCAGGGCGACAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQAQGCYQ*QGDKSF Trigger: GAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTG...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCGGTCAACTGCACTTCTaGCCTCATGGCTATCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFGQLHF*PHGYRS Trigger: GCTACGATAGCCATGAGGGCAGAAGTGCAGTTGACC...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTGCCAGCTGCAGCTGGTaGTTATTCGATGGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQAASCSW*LFDGIQ Trigger: CTGGATCCCATCGAATAACCACCAGCTGCAGCTGGC...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCTGGCTACTTCTGCTATaGTGTCGGCTACTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFWLLLL*CRLLWL Trigger: CAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCA...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAAATCAGCTGTACCAGTGGTaGAATCAATCCAGCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YILLLRDRGTECGSQDPNQLYQW*NQSSIY Trigger: GTAGATGCTGGATTGATTTCACCACTGGTACAGCTG...ATTTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCCGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVRDTSR*VLHCGS Trigger: ACTGCCACAATGCAGCACTCACCGAGATGTGTCTCG...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCCATTGTCTACCATATaGATACAATTTCCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AASPGLQPGRLLWFSVGKPLSTI*IQFPSF Trigger: GAACGATGGAAATTGTATTCATATGGTAGACAATGG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGCGTTCCCAGGAGTTTaGACTGAACTGGGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTTVPLFGHQRELSVRFSAFPGV*TELGAF Trigger: AAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGC...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCAGCATCCTTCCAGACTaGCCTCTGTCCTGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVSILPD*PLSCQQ Trigger: CTGCTGACAGGACAGAGGGCAGTCTGGAAGGATGCT...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTACGGCTACTTTGGCTGTaGAGGAGGCCTGTGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVRLLWL*RRPVAS Trigger: TGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCG...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GAGTACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCACCTTCAAAAAGTTTCTaGATGGACTCATCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EYILLLRDRGTECGSQDPPSKSF*MDSSPS Trigger: GCTTGGAGATGAGTCCATGCAGAAACTTTTTGAAGG...TGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | GAGTACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCATACATGTTCACTAGTTaGCATGGTAACCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EYILLLRDRGTECGSQDPYMFTS*HGNQVL Trigger: AAGCACCTGGTTACCATGGCAACTAGTGAACATGTA...TGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTACCCAGTTCCAAGGCTaGTATCAGTGCCAGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCTQFQG*YQCQGD Trigger: GTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGT...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGAACCCAGTTCCAAGGCTaGTATCAGTGCCAGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGTQFQG*YQCQGD Trigger: GTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGT...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTGGTCAACTGCACTTCTaGCCTCATGGCTATCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQAGQLHF*PHGYRS Trigger: GCTACGATAGCCATGAGGGCAGAAGTGCAGTTGACC...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGTCAATTACAATCTGTaGACCACCTGCTTGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LISPVSKHRRSPQFPYLDVNYNL*TTCLVN Trigger: GTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | TACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAAATTGGCAAAATTTGCAATaGCTAATGCCCCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YILLLRDRGTECGSQDPNWQNLQ*LMPQPA Trigger: AGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCA...ATTTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAAAAACACTCAGGAAAAATGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGCVCVFNITLSTKTLRKNALPV*SSTSWS Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATT...TTTCCTGAGTGTTTTTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTCGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCRDTSR*VLHCGS Trigger: ACTGCCACAATGCAGCACTCACCGAGATGTGTCTCG...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GAGTACATACTGCTCTTACGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCATGTCCAGCAAATCCATaGGTTTTTCTACAATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EYILLLRDRGTECGSQDPCPANP*VFLQSH Trigger: ATGGGATTGTAGAAAAACTCATGGATTTGCTGGACA...TGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGACCCATCACGCCGGCATaGTCTTTGGCTTCACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGPITPA*SLASHH Trigger: ATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGG...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCAAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAACCCATCACGCCGGCATaGTCTTTGGCTTCACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKTQRDITLGQKSHSTKKPITPA*SLASHH Trigger: ATGGTGTGAAGCCAAAGATCATGCCGGCGTGATGGG...TTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTAGCATCCTTCCAGACTaGCCTCTGTCCTGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCSILPD*PLSCQQ Trigger: CTGCTGACAGGACAGAGGGCAGTCTGGAAGGATGCT...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGACGGCTACTTTGGCTGTaGAGGAGGCCTGTGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRRLLWL*RRPVAS Trigger: TGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCG...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCGCCATGGTAACCAGGTaGTTGATGCCACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVAMVTR*LMPPLC Trigger: ACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGC...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGACAAGGCTGCTATCAGTaGCAGGGCGACAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGQGCYQ*QGDKSF Trigger: GAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTG...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTAACCCAGTTCCAAGGCTaGTATCAGTGCCAGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVTQFQG*YQCQGD Trigger: GTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGT...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGACCCAGTTCCAAGGCTaGTATCAGTGCCAGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KDSEGHYTGTEKSFYQEMTQFQG*YQCQGD Trigger: GTCGCCCTGGCACTGATAGCAGCCTTGGAACTGGGT...CATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGGCCAGCTGCAGCTGGTaGTTATTCGATGGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRDITLGQKSHSTKKWKASCSW*LFDGIQ Trigger: CTGGATCCCATCGAATAACCACCAGCTGCAGCTGGC...CTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCGAGTTTGAACTGAACTaGGGGCATTTCAGATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVEFELN*GHFRFK Trigger: CTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTC...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCACGCCGGCATGATCTTTaGCTTCACACCATTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTTVPLFGHQRELSVRFSRRHDL*LHTIQP Trigger: TGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCG...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCATGACTTCGAAGTTTaGAGACAACATCTAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVHDFEV*RQHLER Trigger: CCTTTCTAGATGTTGTCTCCAAACTTCGAAGTCATG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTTGTGCACCACCTGCTTaGTCAACTGCACTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCCAPPA*STALLP Trigger: GGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACA...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCACAGCGACCTTAAATaGTCAATTACAATCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQALTTVPLFGHQRELSVHSDLK*SITICA Trigger: TGCACAGATTGTAATTGACCATTTAAGGTCGCTGTG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTACGAGACACATCTCGGTaGGTGCTGCATTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVRDTSR*VLHCGS Trigger: ACTGCCACAATGCAGCACTCACCGAGATGTGTCTCG...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCGTTCCCAGGAGTTTaGACTGAACTGGGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DSEGHYTGTEKSFYQEMEAFPGV*TELGAF Trigger: AAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGC...TTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTTAATAGCATCATTCTCTGCCAATGGCGCTAGAACTTCAAAAATCATCAGCATCCTTCCAGACTaGCCTCTGTCCTGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLIASFSANGARTSKIISILPD*PLSCQQ Trigger: CTGCTGACAGGACAGAGGGCAGTCTGGAAGGATGCT...GATGATTTTTGAAGTTCTAGCGCCATTGGCAGAGAATGATGCTATTAAGCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR GCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCCCTGCTTCAACCAGCTaGAGCTTAATAGCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFPASTS*SLIASF Trigger: GAATGATGCTATTAAGCTGCAGCTGGTTGAAGCAGG...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCACGTCGTCCTCTTTGTTaGTATCCACCTTCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTTVPLFGHQRELSVRFSRRPLC*YPPSVG Trigger: TCCAACAGAAGGTGGATAGCAACAAAGAGGACGACG...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGCATTCTTTCCCAGTTaGTCAGCAGCTTCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTVPLFGHQRELSVRFSAFFPS*SAASAC Trigger: ACAAGCAGAAGCTGCTGAGCAACTGGGAAAGAATGC...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTGCCATGGTAACCAGGTaGTTGATGCCACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCAMVTR*LMPPLC Trigger: ACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGC...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGCAAGGCTGCTATCAGTaGCAGGGCGACAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDSEGHYTGTEKSFYQEMQGCYQ*QGDKSF Trigger: GAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTG...CATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCCGCCGGCATGATCTTTaGCTTCACACCATTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVRRHDL*LHTIQP Trigger: TGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCG...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTGTAAGCGAGGCCTGTTaGGCAACACTTTTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQAVSEAC*ATLLFS Trigger: TGAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTAC...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | CTGGTGGTTATTCGATGGGATCCAGGAGAGCACCCTTaGGAACACACTGCCTTTTCCTCCTTCAAAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVVIRWDPGEHP*EHTAFSSFKKF Trigger: AAACTTTTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGGGTGCTCTCCTGGATCCCATCGAATAACCACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGATGGCTACTTCTGCTATaGTGTCGGCTACTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGWLLLL*CRLLWL Trigger: CAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCA...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | GCAAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGCTACTTCTGCTATaGTGTCGGCTACTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKTQRDITLGQKSHSTKKWLLLL*CRLLWL Trigger: CAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCA...TTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGACCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGPRSLN*TGGISD Trigger: ATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGG...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGACCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLRGTLHWDRKVILPRNGPRSLN*TGGISD Trigger: ATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGG...TCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTAGCGTTCCCAGGAGTTTaGACTGAACTGGGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVAFPGV*TELGAF Trigger: AAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGC...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGAAGCATCCTTCCAGACTaGCCTCTGTCCTGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRSILPD*PLSCQQ Trigger: CTGCTGACAGGACAGAGGGCAGTCTGGAAGGATGCT...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCCCTTCAAAAAGTTTCTaGATGGACTCATCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFPSKSF*MDSSPS Trigger: GCTTGGAGATGAGTCCATGCAGAAACTTTTTGAAGG...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ACTTGGTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTCCCTTTGGAACACACTaGCTTTTCCTCCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TWWWLVAVTSTLHYAKKSPFGTH*LFLLQK Trigger: TTTTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGGG...ACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCACCAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCCCCTTTGGAACACACTaGCTTTTCCTCCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFPFGTH*LFLLQK Trigger: TTTTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGGG...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAAATGCCCCAGCCAGCTaGAGCTGGTGGTTATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IWTVLCNISPLIQPRRKTNAPAS*SWWLFD Trigger: ATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATT...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGAATGCCCCAGCCAGCTaGAGCTGGTGGTTATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQNAPAS*SWWLFD Trigger: ATCGAATAACCACCAGCTGCAGCTGGCTGGGGCATT...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCGCATTCTTTCCCAGTTaGTCAGCAGCTTCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVAFFPS*SAASAC Trigger: ACAAGCAGAAGCTGCTGAGCAACTGGGAAAGAATGC...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAGCCATGGTAACCAGGTaGTTGATGCCACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWTVLCNISPLIQPRRKTAMVTR*LMPPLC Trigger: ACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGC...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTGCCATGGTAACCAGGTaGTTGATGCCACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGAMVTR*LMPPLC Trigger: ACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGC...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCTACATGTTCACTAGTTaGCATGGTAACCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHHSSLIWTSEGTVSQVFYMFTS*HGNQVL Trigger: AAGCACCTGGTTACCATGGCAACTAGTGAACATGTA...GAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGACAAGGCTGCTATCAGTaGCAGGGCGACAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRQGCYQ*QGDKSF Trigger: GAAGCTCTTGTCGCCCTGGCACTGATAGCAGCCTTG...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTAACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVTCLVN*TSALMA Trigger: AGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGT...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGGTTTTCAGTCAATTACAATCTGTaGACCACCTGCTTGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVPLFGHQRELSVRFSVNYNL*TTCLVN Trigger: GTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC...TGAAAACCTGACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGCTGGTGGTTATTCGATaGGATCCAGGAGAGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQLVVIR*DPGEHP Trigger: AGGGTGCTCTCCTGGATCCCATCGAATAACCACCAG...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGACAGCTGTACCAGTGGTaGAATCAATCCAGCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGQLYQW*NQSSIY Trigger: GTAGATGCTGGATTGATTTCACCACTGGTACAGCTG...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACACCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IWTVLCNISPLIQPRRKTPRSLN*TGGISD Trigger: ATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGG...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTCGTCGTCCTCTTTGTTaGTATCCACCTTCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCRRPLC*YPPSVG Trigger: TCCAACAGAAGGTGGATAGCAACAAAGAGGACGACG...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ACCAACATACAGATGTATCATTCTGGGGTGTGTGTGTGTCTTCAACATTACCCTCGTCGTCCTCTTTGTTaGTATCCACCTTCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNIQMYHSGVCVCLQHYPRRPLC*YPPSVG Trigger: TCCAACAGAAGGTGGATAGCAACAAAGAGGACGACG...AGGGTAATGTTGAAGACACACACACACCCCAGAATGATACATCTGTATGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGAACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRTCLVN*TSALMA Trigger: AGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGT...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTCGCCGGCATGATCTTTaGCTTCACACCATTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGRRHDL*LHTIQP Trigger: TGGTTGAATGGTGTGAAGCCAAAGATCATGCCGGCG...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGAGTAAGCGAGGCCTGTTaGGCAACACTTTTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LANCLYSSEKGETVGKEGVSEAC*ATLLFS Trigger: TGAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTAC...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATCACAGCGACCTTAAATaGTCAATTACAATCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WNQEPQEGLLCCLANCLYHSDLK*SITICA Trigger: TGCACAGATTGTAATTGACCATTTAAGGTCGCTGTG...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | TCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGAATATaGGACCTATTCAAGTTTAGGTGGTACAGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEKGETVGKEGI*DLFKFRWYRPD Trigger: GTCAGGCCTGTACCACCTAAACTTGAATAGGTCCAATATTCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGTGGCTACTTCTGCTATaGTGTCGGCTACTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVLCNISPLIQPRRKTIKWLLLL*CRLLWL Trigger: CAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCA...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTCAGCTGTACCAGTGGTaGAATCAATCCAGCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGQLYQW*NQSSIY Trigger: GTAGATGCTGGATTGATTTCACCACTGGTACAGCTG...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATCCATTGTCTACCATATaGATACAATTTCCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WNQEPQEGLLCCLANCLYPLSTI*IQFPSF Trigger: GAACGATGGAAATTGTATTCATATGGTAGACAATGG...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTTGTCCAGCAAATCCATaGGTTTTTCTACAATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQACPANP*VFLQSH Trigger: ATGGGATTGTAGAAAAACTCATGGATTTGCTGGACA...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AACATACAGATGTATCATTCTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCTCAAAACCGTCTCCGTaGCACCAGCTGATAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: NIQMYHSGVCVCLQHYPFSKPSP*HQLITS Trigger: AGATGTTATCAGCTGGTGTCACGGAGACGGTTTTGA...GAAAGGGTAATGTTGAAGACACACACACACCCCAGAATGATACATCTGTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR TCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGACCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRPRSLN*TGGISD Trigger: ATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGG...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACATGGCAAAATTTGCAATaGCTAATGCCCCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWTVLCNISPLIQPRRKTWQNLQ*LMPQPA Trigger: AGCTGGCTGGGGCATTAGCCATTGCAAATTTTGCCA...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTGAGTTTGAACTGAACTaGGGGCATTTCAGATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQAEFELN*GHFRFK Trigger: CTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTC...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTCCATTGTCTACCATATaGATACAATTTCCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQAPLSTI*IQFPSF Trigger: GAACGATGGAAATTGTATTCATATGGTAGACAATGG...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTGCACTTCCTGGTCTTTaGTATTTAACAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCALPGL*YLTAVP Trigger: TGGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGC...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAAAAACACTCAGGAAACCCTTTGGAACACACTaGCTTTTCCTCCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGCVCVFNITLSTKTLRKPFGTH*LFLLQK Trigger: TTTTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGGG...TTTCCTGAGTGTTTTTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGACTGGCTACTATGGCTTTTAAAACCGGCCTTCCTCTCTTTAGACAAGCTTCCAGCATCTACACATaGGATTCGCATAAATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TGLATMAFKTGLPLFRQASSIYT*DSHKFI Trigger: AATGAATTTATGCGAATCCCATGTGTAGATGCTGGA...AGCTTGTCTAAAGAGAGGAAGGCCGGTTTTAAAAGCCATAGTAGCCAGTCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGAGTAAGCGAGGCCTGTTaGGCAACACTTTTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRVSEAC*ATLLFS Trigger: TGAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTAC...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | AATCTTATTAGGCAGGTACCTATAGCAGTTCTTCCATaGGTACTGGAACATTACACGCATGCACAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NLIRQVPIAVLP*VLEHYTHAQVM Trigger: CATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATAGGTACCTGCCTAATAAGATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | TATCAGTGCCAGGGCGACAAGAGCTTCATTCTGCATGATTACATGTTCACTAGTATTTTTGGCTACTTCTaGTATGATGTCGGCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQCQGDKSFILHDYMFTSIFGYF*YDVGYF Trigger: AAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAAT...ACTAGTGAACATGTAATCATGCAGAATGAAGCTCTTGTCGCCCTGGCACTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGGCACTTCCTGGTCTTTaGTATTTAACAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQALPGL*YLTAVP Trigger: TGGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGC...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGCACTTCCTGGTCTTTaGTATTTAACAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLRGTLHWDRKVILPRNALPGL*YLTAVP Trigger: TGGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGC...ATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTACATGTTCACTAGTTaGCATGGTAACCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGYMFTS*HGNQVL Trigger: AAGCACCTGGTTACCATGGCAACTAGTGAACATGTA...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR TCA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTGTCCAGCAAATCCATaGGTTTTTCTACAATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGCPANP*VFLQSH Trigger: ATGGGATTGTAGAAAAACTCATGGATTTGCTGGACA...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ATACTCCATTCTGCCCCCTGTATCCTCTTTCAAACAAATTGCTTCTTCTTTTTACCTGCTTCAACCAGCTaGAGCTTAATAGCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILHSAPCILFQTNCFFFLPASTS*SLIASF Trigger: GAATGATGCTATTAAGCTGCAGCTGGTTGAAGCAGG...TAAAAAGAAGAAGCAATTTGTTTGAAAGAGGATACAGGGGGCAGAATGGAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGACCTTCAAAAAGTTTCTaGATGGACTCATCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWVETCSDSHVHINYGFRPSKSF*MDSSPS Trigger: GCTTGGAGATGAGTCCATGCAGAAACTTTTTGAAGG...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTTCCAGCATCTACACATaGGATTCGCATAAATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKVRFRERRDTGISCSSIYT*DSHKFI Trigger: AATGAATTTATGCGAATCCCATGTGTAGATGCTGGA...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | AAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAGTTTGAACTGAACTaGGGGCATTTCAGATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDSEGHYTGTEKSFYQEMEFELN*GHFRFK Trigger: CTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTC...CATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTACATGACTTCGAAGTTTaGAGACAACATCTAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVHDFEV*RQHLER Trigger: CCTTTCTAGATGTTGTCTCCAAACTTCGAAGTCATG...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | ATTACATGTTCACTAGTTGCCATGGTAACCAGGTGCTaGATGCCACCACTCTGTACAATGGTTTTAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: ITCSLVAMVTRC*MPPLCTMVLIT Trigger: TGTAATTAAAACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCAACTAGTGAACATGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATCCATTGTCTACCATATaGATACAATTTCCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLRGTLHWDRKVILPRNPLSTI*IQFPSF Trigger: GAACGATGGAAATTGTATTCATATGGTAGACAATGG...ATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGTTTTTCACTTGTTTCTaGATTATTCTGAGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQFFTCF*IILSQG Trigger: GCCTTGGCTCAGAATAATGCAGAAACAAGTGAAAAA...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATTTTTGGCTACTTCTaGTATGATGTCGGCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: IWTVLCNISPLIQPRRKTIFGYF*YDVGYF Trigger: AAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAAT...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGATTTTTGGCTACTTCTaGTATGATGTCGGCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQIFGYF*YDVGYF Trigger: AAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAAT...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATATTTTTGGCTACTTCTaGTATGATGTCGGCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRGTLHWDRKVILPRNIFGYF*YDVGYF Trigger: AAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAAT...ATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR CCA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTATCCAGCATCTACACATaGGATTCGCATAAATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSIGTGTLHACTSDVSSIYT*DSHKFI Trigger: AATGAATTTATGCGAATCCCATGTGTAGATGCTGGA...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| 3UTR CAA 72 bp | TCAGGTTTCCTCTTATGTCCAATTAGAATTAGCACATaGAAAGGGAGCATGAAAGATGAATCTCCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFLLCPIRIST*KGSMKDESPCF Trigger: AAAGCAGGGAGATTCATCTTTCATGCTCCCTTTCAATGTGCTAATTCTAATTGGACATAAGAGGAAACCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CCA 90 bp | ATACTCCATTCTGCCCCCTGTATCCTCTTTCAAACAAATTGCTTCTTCTTTTTATCCAGCATCTACACATaGGATTCGCATAAATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILHSAPCILFQTNCFFFLSSIYT*DSHKFI Trigger: AATGAATTTATGCGAATCCCATGTGTAGATGCTGGA...TAAAAAGAAGAAGCAATTTGTTTGAAAGAGGATACAGGGGGCAGAATGGAGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCCCTCACTGCCCTCCACTCCTGTAACGGAGCTCAGCCTCCCTCAGACAATGGTAACCAGGTGCTaGATGCCACCACTCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSLPSTPVTELSLPQTMVTRC*MPPLCT Trigger: TGTACAGAGTGGTGGCATCAAGCACCTGGTTACCAT...TGTCTGAGGGAGGCTGAGCTCCGTTACAGGAGTGGAGGGCAGTGAGGGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTGGATGGAGAACAGTGGAGTGGGCGGAGCTGGGATGAGCCTGGTGCCATGTAAGCGAGGCCTGTaGGGCAACACTTTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWMENSGVGGAGMSLVPCKRGL*GNTFVL Trigger: GAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTACA...TGGCACCAGGCTCATCCCAGCTCCGCCCACTCCACTGTTCTCCATCCAGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS TCA 90 bp | AGCTGTTGCGAGCAGAAACCTCACCATTTTTGGCTACTTCTGCTATaGTGTCGGCTACTTTGGCTGTGCAGGAGGCCTGTGGCGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SCCEQKPHHFWLLLL*CRLLWLCRRPVAST Trigger: TGTTGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTCTGCTCGCAACAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS GCA 90 bp | ACTGAAGCTGTTGCGAGCAGAAACCTCACCATTTTTGGCTACTTCTaGTATGATGTCGGCTACTTTGGCTGTGCAGGAGGCCTGTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TEAVASRNLTIFGYF*YDVGYFGCAGGLWR Trigger: ACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTCTGCTCGCAACAGCTTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR CAA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCGTTCCTGGCAAAATTaGCAATGGCTAATGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQALTTVPLFGHQRELSVRSWQN*QWLMPQ Trigger: CTGGGGCATTAGCCATTGCAAATTTTGCCAGGAACG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | ACTTGGTGGTGGTTAGTGGCAGTGACGAGCACACTACATTATGCCAAGAAGAGTCAGAGAGCAGTCTGTTaGATTCGCCCATCACGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TWWWLVAVTSTLHYAKKSQRAVC*IRPSRR Trigger: CCGGCGTGATGGGCGAATCAAACAGACTGCTCTCTG...ACTCTTCTTGGCATAATGTAGTGTGCTCGTCACTGCCACTAACCACCACCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | CGAGACAGAGGGACTGAGTGTGGTTCCCAGGACCCAAATTTGGCAGCTCAAAACACCATGGAATTGTACTaGATCTCCGGGGCACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RDRGTECGSQDPNLAAQNTMELY*ISGALL Trigger: GAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGT...GTTTTGAGCTGCCAAATTTGGGTCCTGGGAACCACACTCAGTCCCTCTGTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGATCAGGACCATGGAATaGTACTTGATCTCCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLHYAKKSLCGESWLAAWIRTME*YLISGA Trigger: TGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACCGTTCCTGGCAAAATTaGCAATGGCTAATGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LISPVSKHRRSPQFPYLDRSWQN*QWLMPQ Trigger: CTGGGGCATTAGCCATTGCAAATTTTGCCAGGAACG...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTCGCATAAATTCATTTTaGGCTACTTCTGCTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIRINSF*ATSAMM Trigger: CATCATAGCAGAAGTAGCCAAAAATGAATTTATGCG...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCAGCACTTCCTGGTCTTaGCTATTTAACAGCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: AQALTTVPLFGHQRELSVSTSWS*LFNSCT Trigger: GGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGCT...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTCAACCTTGGGTGTGAGGAGGAAGGCGGGTCACAGGGAATCCCGATTCAGCTGATAACATCTTaGCTTTATTTACAACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLNLGCEEEGGSQGIPIQLITS*LYLQLG Trigger: TCCCAGTTGTAAATAAAGCAAAGATGTTATCAGCTG...AATCGGGATTCCCTGTGACCCGCCTTCCTCCTCACACCCAAGGTTGAGTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS GCA 90 bp | GGGCCTGAAGGGAATGGCTATCGTAGCATATGTTTCCTAATGCCCTaGCCGTTTGAAGCAGCACTTCCTGGTCTTTGCTATTTAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPEGNGYRSICFLMP*PFEAALPGLCYLTA Trigger: AGCTGTTAAATAGCAAAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATTAGGAAACATATGCTACGATAGCCATTCCCTTCAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029796.11 ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | ACACTACATTATGCCAAGAAGAGTCTTTGCGGCGAGTCCTGGCTTGCAGCCTGGGTGGCGTCAACAGATTaGCAAACAACTGAAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: TLHYAKKSLCGESWLAAWVASTD*QTTEEF Trigger: GAATTCTTCAGTTGTTTGCAAATCTGTTGACGCCAC...CCAGGCTGCAAGCCAGGACTCGCCGCAAAGACTCTTCTTGGCATAATGTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | TGCCATGGTAACCAGGTGCTTGATGCCACCACTCTGTACAATGGTTTTAATTACATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHGNQVLDATTLYNGFNYMMSAT*AVQEAC Trigger: ACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCAT...GTAATTAAAACCATTGTACAGAGTGGTGGCATCAAGCACCTGGTTACCATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
||
| CDS-3UTR CAA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVMMSAT*AVQEAC Trigger: ACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCAT...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCGAGTCCTGGCTTGCAGCCTGGGAGATTATTGTGGTTCTCAGTGGGAAAGCAGCTGATAACATCTTaGCTTTATTTACAACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AASPGLQPGRLLWFSVGKQLITS*LYLQLG Trigger: TCCCAGTTGTAAATAAAGCAAAGATGTTATCAGCTG...CTTTCCCACTGAGAACCACAATAATCTCCCAGGCTGCAAGCCAGGACTCGCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATATGGTAACCAGGTGCTaGATGCCACCACTCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: WNQEPQEGLLCCLANCLYMVTRC*MPPLCT Trigger: TGTACAGAGTGGTGGCATCAAGCACCTGGTTACCAT...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | TGGAATCAGGAGCCTCAGGAAGGTTTGCTGTGTTGCTTGGCAAACTGCCTATATATCAGGACCATGGAATaGTACTTGATCTCCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WNQEPQEGLLCCLANCLYIRTME*YLISGA Trigger: TGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT...ATATAGGCAGTTTGCCAAGCAACACAGCAAACCTTCCTGAGGCTCCTGATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS CCA 90 bp | TACTTCTGCTATGATGTCGGCTACTTTGGCTGTGCAGGAGGCCTGTaGCGTCAACAGATTTGCAAACAACTGAAGAATTCCACTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFCYDVGYFGCAGGL*RQQICKQLKNSTSL Trigger: CAAGGAAGTGGAATTCTTCAGTTGTTTGCAAATCTGTTGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCATAGCAGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196106.5 ENSMUST00000196280.5 ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | CTCATTTCTCCAGTGAGCAAGCACAGGCGCTCACCACAGTTCCCTTATTTGGACGTGGCGTCAACAGATTaGCAAACAACTGAAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LISPVSKHRRSPQFPYLDVASTD*QTTEEF Trigger: GAATTCTTCAGTTGTTTGCAAATCTGTTGACGCCAC...GTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGGAGAAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVKSKVRFRERRDTGISCMMSAT*AVQEAC Trigger: ACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCAT...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGAATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LANCLYSSEKGETVGKEGMMSAT*AVQEAC Trigger: ACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCAT...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGCAGAGAGCAGTCTGTTaGATTCGCCCATCACGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQQRAVC*IRPSRR Trigger: CCGGCGTGATGGGCGAATCAAACAGACTGCTCTCTG...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTACAGAGAGCAGTCTGTTaGATTCGCCCATCACGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YSSSSIGTGTLHACTSDVQRAVC*IRPSRR Trigger: CCGGCGTGATGGGCGAATCAAACAGACTGCTCTCTG...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTACTGTGCACCACCTGCTaGGTCAACTGCACTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSSSSIGTGTLHACTSDVLCTTC*VNCTSA Trigger: GGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAG...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTCTGTGCACCACCTGCTaGGTCAACTGCACTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGLCTTC*VNCTSA Trigger: GGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAG...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS TCA 90 bp | CTCTGCTCTGTAAGCGAGGCCTGTTGGGCAACACTTTTGTTCTCATaGCTTCGAAGTTTGGAGACAACATCTAGAAAGGCCAAATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCSVSEACWATLLFS*LRSLETTSRKAKSC Trigger: ACAGGATTTGGCCTTTCTAGATGTTGTCTCCAAACTTCGAAGTCATGAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTACAGAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | AAAGTAGAGCTGGCTCAGCAGTCAGGAGTACATACTGCTCTTACGAGACAGAGGGTGGCGTCAACAGATTaGCAAACAACTGAAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: KVELAQQSGVHTALTRQRVASTD*QTTEEF Trigger: GAATTCTTCAGTTGTTTGCAAATCTGTTGACGCCAC...CCTCTGTCTCGTAAGAGCAGTATGTACTCCTGACTGCTGAGCCAGCTCTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQMMSAT*AVQEAC Trigger: ACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCAT...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | GAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGCAGTCCGTTCCTGGCAAAATTaGCAATGGCTAATGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGHYTGTEKSFYQEMEAVRSWQN*QWLMPQ Trigger: CTGGGGCATTAGCCATTGCAAATTTTGCCAGGAACG...GACTGCTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGGCGCTCACCACAGTTCCCTTATTTGGACATCAGAGGGAACTGTCAGTCCAGCTGATAACATCTTaGCTTTATTTACAACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQALTTVPLFGHQRELSVQLITS*LYLQLG Trigger: TCCCAGTTGTAAATAAAGCAAAGATGTTATCAGCTG...GACTGACAGTTCCCTCTGATGTCCAAATAAGGGAACTGTGGTGAGCGCCTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
||
| CDS-3UTR CAA 90 bp | ACTTACCAACACCATAGACTGAAACTGAGAGAAAAGTCTAGACAATGGTACTCACAGAGAGCAGTCTGTTaGATTCGCCCATCACGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TYQHHRLKLREKSRQWYSQRAVC*IRPSRR Trigger: CCGGCGTGATGGGCGAATCAAACAGACTGCTCTCTG...TGAGTACCATTGTCTAGACTTTTCTCTCAGTTTCAGTCTATGGTGTTGGTAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
||
| CDS GCA 90 bp | TGTTTCCTAATGCCCTGCCCGTTTGAAGCAGCACTTCCTGGTCTTTaGTATTTAACAGCTGTACCAGTGGTGAAATCAATCCAGCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: CFLMPCPFEAALPGL*YLTAVPVVKSIQHL Trigger: TAGATGCTGGATTGATTTCACCACTGGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCATTAGGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAAAAACACTCAGGAAAATGGTAACCAGGTGCTaGATGCCACCACTCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: LGCVCVFNITLSTKTLRKMVTRC*MPPLCT Trigger: TGTACAGAGTGGTGGCATCAAGCACCTGGTTACCAT...TTTCCTGAGTGTTTTTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | TTGGCAAACTGCCTATATAGTTCAGAAAAAGGAGAAACCGTAGGGAAGGAAGGAACCATGGAATTGTACTaGATCTCCGGGGCACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LANCLYSSEKGETVGKEGTMELY*ISGALL Trigger: GAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGT...TCCTTCCTTCCCTACGGTTTCTCCTTTTTCTGAACTATATAGGCAGTTTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAAAAGCAAAGTCCGATTTAGAGAACGCAGAGATACAGGTATCTCCTGTACCATGGAATTGTACTaGATCTCCGGGGCACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SVKSKVRFRERRDTGISCTMELY*ISGALL Trigger: GAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGT...ACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGCTTTTCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTACCATGGAATTGTACTaGATCTCCGGGGCACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGTMELY*ISGALL Trigger: GAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGT...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | AACAGTTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTATCAGGACCATGGAATaGTACTTGATCTCCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: NSYGWRLVLTVMFTLTMGIRTME*YLISGA Trigger: TGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT...ACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | AAAGACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGATCAGGACCATGGAATaGTACTTGATCTCCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: KDSEGHYTGTEKSFYQEMIRTME*YLISGA Trigger: TGCCCCGGAGATCAAGTACAATTCCATGGTCCTGAT...CATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACATGTAAGCGAGGCCTGTaGGGCAACACTTTTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: IWTVLCNISPLIQPRRKTCKRGL*GNTFVL Trigger: GAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTACA...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | GGGTTTCTTTTAACTCCTTCCTACGCTCCACTCACATTAAAATCCATGTTTCAGTGTAAGCGAGGCCTGTaGGGCAACACTTTTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GFLLTPSYAPLTLKSMFQCKRGL*GNTFVL Trigger: GAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTACA...CTGAAACATGGATTTTAATGTGAGTGGAGCGTAGGAAGGAGTTAAAAGAAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | ACTCAGAGGGACATTACACTGGGACAGAAAAGTCATTCTACCAAGAAATGGAAGAGCACTTCCTGGTCTTaGCTATTTAACAGCTGTACC | + |
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Preference number: 5 (lower is better) Translates to: TQRDITLGQKSHSTKKWKSTSWS*LFNSCT Trigger: GGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGCT...CTTCCATTTCTTGGTAGAATGACTTTTCTGTCCCAGTGTAATGTCCCTCTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGATGGTAACCAGGTGCTaGATGCCACCACTCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: TVLCNISPLIQPRRKTIKMVTRC*MPPLCT Trigger: TGTACAGAGTGGTGGCATCAAGCACCTGGTTACCAT...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | ATATGGACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAAGCACTTCCTGGTCTTaGCTATTTAACAGCTGTACC | + |
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Preference number: 5 (lower is better) Translates to: IWTVLCNISPLIQPRRKTSTSWS*LFNSCT Trigger: GGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGCT...TGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGTCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS TCA 90 bp | TCTTGTGCATCTATTAACATTCTTAGCGTTCCCAGGAGTTTGAACTaGACTGGGGGCATTTCAGATTTAAGGAATTTCAAAACCGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SCASINILSVPRSLN*TGGISDLRNFKTVS Trigger: GGAGACGGTTTTGAAATTCCTTAAATCTGAAATGCCCCCAGTTCAGTTCAAACTCCTGGGAACGCTAAGAATGTTAATAGATGCACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | TATAGCAGTTCTTCCATTGGTACTGGAACATTACACGCATGCACAAGTGATGTAGTGGCGTCAACAGATTaGCAAACAACTGAAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: YSSSSIGTGTLHACTSDVVASTD*QTTEEF Trigger: GAATTCTTCAGTTGTTTGCAAATCTGTTGACGCCAC...TACATCACTTGTGCATGCGTGTAATGTTCCAGTACCAATGGAAGAACTGCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | AACATACAGATGTATCATTCTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCGTGGCGTCAACAGATTaGCAAACAACTGAAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: NIQMYHSGVCVCLQHYPFVASTD*QTTEEF Trigger: GAATTCTTCAGTTGTTTGCAAATCTGTTGACGCCAC...GAAAGGGTAATGTTGAAGACACACACACACCCCAGAATGATACATCTGTATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196106.5 ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | TTATGGGTGGAGACTTGTTCTGACAGTCATGTTCACATTAACTATGGGTTTAGAAGCACTTCCTGGTCTTaGCTATTTAACAGCTGTACC | + |
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Preference number: 5 (lower is better) Translates to: LWVETCSDSHVHINYGFRSTSWS*LFNSCT Trigger: GGTACAGCTGTTAAATAGCAAAGACCAGGAAGTGCT...TCTAAACCCATAGTTAATGTGAACATGACTGTCAGAACAAGTCTCCACCCATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS-3UTR CAA 90 bp | ACAGATGTATCATTCTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAACGCATAAATTCATTTTaGGCTACTTCTGCTATGATG | + |
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Preference number: 5 (lower is better) Translates to: TDVSFWGVCVSSTLPFQQRINSF*ATSAMM Trigger: CATCATAGCAGAAGTAGCCAAAAATGAATTTATGCG...TTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAGAATGATACATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | ACAGATGTATCATTCTGGGGTGTGTGTGTGTCTTCAACATTACCCTTTCAACAACAGCTGATAACATCTTaGCTTTATTTACAACTGGGA | + |
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Preference number: 5 (lower is better) Translates to: TDVSFWGVCVSSTLPFQQQLITS*LYLQLG Trigger: TCCCAGTTGTAAATAAAGCAAAGATGTTATCAGCTG...TTGTTGAAAGGGTAATGTTGAAGACACACACACACCCCAGAATGATACATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200396.2 |
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| CDS-3UTR CAA 90 bp | ATACTCCATTCTGCCCCCTGTATCCTCTTTCAAACAAATTGCTTCTTCTTTTTAGAAACCTCACCATTTTaGGCTACTTCTGCTATGATG | + |
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Preference number: 5 (lower is better) Translates to: ILHSAPCILFQTNCFFFLETSPF*ATSAMM Trigger: CATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTC...TAAAAAGAAGAAGCAATTTGTTTGAAAGAGGATACAGGGGGCAGAATGGAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| CDS-3UTR CAA 90 bp | ACAGTATTATGCAACATTAGTCCACTTATCCAGCCCAGGAGAAAGACAATAAAGCGCATAAATTCATTTTaGGCTACTTCTGCTATGATG | + |
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Preference number: 5 (lower is better) Translates to: TVLCNISPLIQPRRKTIKRINSF*ATSAMM Trigger: CATCATAGCAGAAGTAGCCAAAAATGAATTTATGCG...CTTTATTGTCTTTCTCCTGGGCTGGATAAGTGGACTAATGTTGCATAATACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS CAA 72 bp | TCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATaGTACTTGATCTCCGGGGCACTTCTCTCATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SDPMRAQIRTME*YLISGALLSSA Trigger: AGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS CAA 90 bp | GATTCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATTGTACTaGATCTCCGGGGCACTTCTCTCATCTGCTAGCAGTCGGTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: DSDPMRAQIRTMELY*ISGALLSSASSRCK Trigger: CTTACACCGACTGCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS CAA 90 bp | TATAGAGATTCGGATCCCATGAGAGCGCAGATCAGGACCATGGAATaGTACTTGATCTCCGGGGCACTTCTCTCATCTGCTAGCAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: YRDSDPMRAQIRTME*YLISGALLSSASSR Trigger: CCGACTGCTAGCAGATGAGAGAAGTGCCCCGGAGATCAAGTACAATTCCATGGTCCTGATCTGCGCTCTCATGGGATCCGAATCTCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS CAA 90 bp | GAAACCTCACCATTTTTGGCTACTTCTGCTATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGTGGCGTCAACAGATTTGCAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: ETSPFLATSAMMSAT*AVQEACGVNRFANN Trigger: GTTGTTTGCAAATCTGTTGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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| CDS CAA 90 bp | CGCATAAATTCATTTTTGGCTACTTCTGCTATGATGTCGGCTACTTaGGCTGTGCAGGAGGCCTGTGGCGTCAACAGATTTGCAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: RINSFLATSAMMSAT*AVQEACGVNRFANN Trigger: GTTGTTTGCAAATCTGTTGACGCCACAGGCCTCCTGCACAGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAATGAATTTATGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 ENSMUST00000200396.2 |
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| CDS CAA 72 bp | TTCCACTGTAAGTCTCTGCTCTGTAAGCGAGGCCTGTaGGGCAACACTTTTGTTCTCATGACTTCGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FHCKSLLCKRGL*GNTFVLMTSKF Trigger: AAACTTCGAAGTCATGAGAACAAAAGTGTTGCCCAACAGGCCTCGCTTACAGAGCAGAGACTTACAGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029796.11 ENSMUST00000098574.9 ENSMUST00000196280.5 |
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| CDS CAA 72 bp | AAACTGAAGCTGTTGCGAGCAGAAACCTCACCATTTTaGGCTACTTCTGCTATGATGTCGGCTACTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KLKLLRAETSPF*ATSAMMSATLA Trigger: AGCCAAAGTAGCCGACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTCTGCTCGCAACAGCTTCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196106.5 |
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