Pregenerated sensors for RANGRF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032892Ensembl transcript IDs: ENSMUST00000038644.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | AGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTaGGTCCCCGAGTCCTCAGTAGCACGTTGTGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: REEAERNSPSQN*VPESSVARCVS Trigger: TGAGACACAACGTGCTACTGAGGACTCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCGCAGCCGCTTCGCCCTaGACGTGGGCCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MFTSREEAERNSPSQNWVAAASP*TWACSS Trigger: GGAGCTGCAGGCCCACGTGCAGGGCGAAGCGGCTGC...GACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR TCA 90 bp | TACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCCGAAGCAAAAGATCAGTCTaGTACTGGGGCAGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YIQGRSRKKLPLSELGPRSKRSV*YWGSRS Trigger: GCTGCGGCTGCCCCAGTATCAGACTGATCTTTTGCT...TCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCGCTTCGCCCTGCACGTaGGCCTGCAGCTCCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GSVLCLHPGKKQKETPPLASPCT*ACSSRS Trigger: ACTTCTGGAGCTGCAGGCCCACGTGCAGGGCGAAGC...GAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACACTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR TCA 90 bp | TGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCAGCCGCAGCAAGGCCTaGTGCAGTGTGACATCCTTT | + |
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Preference number: 4 (lower is better) Translates to: CLHPGKKQKETPPLRTGSSRSKA*CSVTSF Trigger: AAAGGATGTCACACTGCATCAGGCCTTGCTGCGGCT...GGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCTGCACAGATAGCACGTaGACAGCCCTAGCCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSVLCLHPGKKQKETPPLCTDST*TALAPC Trigger: GCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCA...GAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAAAGGGACCAGGCATCCTaGCAGCAGCCTCTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VSYVYIQGRSRKKLPLSERDQAS*QQPLRD Trigger: ATCCCTGAGAGGCTGCTGTCAGGATGCCTGGTCCCT...TTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR TCA 90 bp | TGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCAGGCCTGATGCAGTGTaGCATCCTTTGCTACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLHPGKKQKETPPLRTGSRPDAV*HPLLPA Trigger: AGCAGGTAGCAAAGGATGTCACACTGCATCAGGCCT...GGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | CCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCCGAGTCCTACATCCTTTGCTACCTaGTGGTTTTCTTTAGCTACC | + |
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Preference number: 4 (lower is better) Translates to: PGKKQKETPPLRTGSPSPTSFAT*WFSLAT Trigger: GGTAGCTAAAGAAAACCAGCAGGTAGCAAAGGATGT...AGGACTCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | TGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCTCCAAACAGAGAGGCTaGACAGATAGCACGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: CLHPGKKQKETPPLRTGSSKQRG*TDSTCT Trigger: TGTGCACGTGCTATCTGTGCAGCCTCTCTGTTTGGA...GGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | TACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCCGATTTTCTTTAGCTACCTaGTGCTTGCCAGAAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: YIQGRSRKKLPLSELGPRFSLAT*CLPERD Trigger: GTCCCTTTCTGGCAAGCAGCAGGTAGCTAAAGAAAA...TCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAACTTCTTGGTTGTCTaGCACCGGTCGGAGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: GSVLCLHPGKKQKETPPLNFLVV*HRSEVT Trigger: AGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTT...GAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACACTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CCA 90 bp | TTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCCTCCTTTGCTACCTGCTaGTTTTCTTTAGCTACCTGC | + |
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Preference number: 4 (lower is better) Translates to: FTSREEAERNSPSQNWVPSFATC*FSLATC Trigger: GCAGGTAGCTAAAGAAAACCAGCAGGTAGCAAAGGA...GGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR TCA 90 bp | TTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGGCTCCAGAAGTTCTATaGTCAGACTCTGGTCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LCLHPGKKQKETPPLRTGAPEVL*SDSGRS Trigger: TGACCGACCAGAGTCTGATCATAGAACTTCTGGAGC...CCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | GAAGTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCATCTTTAGCTACCTGCTaGTTGCCAGAAAGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: EVSYVYIQGRSRKKLPLSSLATC*LPERDQ Trigger: CTGGTCCCTTTCTGGCAAGCAGCAGGTAGCTAAAGA...TGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR GCA 90 bp | TGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCAGTGTGACATCCTTTaGTACCTGCTGGTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: CLHPGKKQKETPPLRTGSQCDIL*YLLVFF Trigger: AAAGAAAACCAGCAGGTAGCAAAGGATGTCACACTG...GGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCGGGGACCAAAGAGGTTaGGATCATGAAGAGTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GSVLCLHPGKKQKETPPLGDQRG*DHEESN Trigger: GTTTGACTCTTCATGATCCCAACCTCTTTGGTCCCC...GAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACACTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAATGGTCGGTCACAGGATaGCAGAAAACTTCTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: VSYVYIQGRSRKKLPLSEWSVTG*QKTSWL Trigger: CAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCA...TTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS GCA 90 bp | AAACAGAGAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTaGACCCGGCCAACGTCCTCAAAATGGTACCGCGCAGCCGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: KQRGCTDSTCTALAP*TRPTSSKWYRAAAS Trigger: CGAAGCGGCTGCGCGGTACCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS GCA 90 bp | ACCCGGCCAACGTCCTCAAAATGGTACCGCGCAGCCGCTTCGCCCTaGACGTGGGCCTGCAGCTCCAGAAGTTCTATGATCAGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TRPTSSKWYRAAASP*TWACSSRSSMIRLW Trigger: CCAGAGTCTGATCATAGAACTTCTGGAGCTGCAGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTACCATTTTGAGGACGTTGGCCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS GCA 90 bp | CTCAGGGATAAGTTCTCCAAACAGAGAGGCTGCACAGATAGCACGTaGACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGG | + |
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Preference number: 5 (lower is better) Translates to: LRDKFSKQRGCTDST*TALAPCTRPTSSKW Trigger: CCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTTGGAGAACTTATCCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CCA 90 bp | CAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTTGGTTGTCTaGCACCGGTCGGAGGTCACTCACATCAATGGCCCCTGTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: QTLVGHRMAENFLVV*HRSEVTHINGPCRE Trigger: CTCCCTACAGGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CCA 90 bp | TCTATGATCAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTTaGTTGTCTGGCACCGGTCGGAGGTCACTCACATCAATGGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: SMIRLWSVTGWQKTS*LSGTGRRSLTSMAP Trigger: AGGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CCA 90 bp | TGCAGCTCCAGAAGTTCTATGATCAGACTCTGGTCGGTCACAGGATaGCAGAAAACTTCTTGGTTGTCTGGCACCGGTCGGAGGTCACTC | + |
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Preference number: 5 (lower is better) Translates to: CSSRSSMIRLWSVTG*QKTSWLSGTGRRSL Trigger: GAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCATAGAACTTCTGGAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS TCA 90 bp | ACTAGTTACCAGCTGTTCAAAGTTACTCAGGCTCCAAGGTGGACATaGCAGATTTTCAGGGCCAAGAGACCTGCTGTGACACGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSYQLFKVTQAPRWT*QIFRAKRPAVTRGL Trigger: CAGCCCCCGTGTCACAGCAGGTCTCTTGGCCCTGAAAATCTGTCATGTCCACCTTGGAGCCTGAGTAACTTTGAACAGCTGGTAACTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CAA 90 bp | ATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCTTAGCTACCTGCTGCTaGCCAGAAAGGGACCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: MFTSREEAERNSPSQNWVLATCC*PERDQA Trigger: TGCCTGGTCCCTTTCTGGCAAGCAGCAGGTAGCTAA...GACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CAA 90 bp | CTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGCAGAAAACTTCTTGGTaGTCTGGCACCGGTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LMFTSREEAERNSPSQNWQKTSW*SGTGRR Trigger: CCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTG...CCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAAATGGCAGAAAACTTCTaGGTTGTCTGGCACCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: VSYVYIQGRSRKKLPLSEMAENF*VVWHRS Trigger: CGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCAT...TTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS GCA 72 bp | ACGTCCTCAAAATGGTACCGCGCAGCCGCTTCGCCCTaGACGTGGGCCTGCAGCTCCAGAAGTTCTATGATC | + |
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Preference number: 6 (lower is better) Translates to: TSSKWYRAAASP*TWACSSRSSMI Trigger: GATCATAGAACTTCTGGAGCTGCAGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTACCATTTTGAGGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS GCA 72 bp | CAGCCTCTCAGGGATAAGTTCTCCAAACAGAGAGGCTaGACAGATAGCACGTGCACAGCCCTAGCCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QPLRDKFSKQRG*TDSTCTALAPC Trigger: GCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTTGGAGAACTTATCCCTGAGAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CCA 72 bp | GTCGGTCACAGGATGGCAGAAAACTTCTTGGTTGTCTaGCACCGGTCGGAGGTCACTCACATCAATGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VGHRMAENFLVV*HRSEVTHINGP Trigger: GGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CAA 72 bp | CAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTaGGTTGTCTGGCACCGGTCGGAGGTCACTCACATC | + |
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Preference number: 6 (lower is better) Translates to: QTLVGHRMAENF*VVWHRSEVTHI Trigger: GATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CAA 72 bp | CTCTGGTCGGTCACAGGATGGCAGAAAACTTCTTGGTaGTCTGGCACCGGTCGGAGGTCACTCACATCAATG | + |
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Preference number: 6 (lower is better) Translates to: LWSVTGWQKTSW*SGTGRRSLTSM Trigger: CATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CAA 90 bp | ATGATCAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTTGGTaGTCTGGCACCGGTCGGAGGTCACTCACATCAATGGCCCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: MIRLWSVTGWQKTSW*SGTGRRSLTSMAPV Trigger: TACAGGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CAA 90 bp | TTCTATGATCAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTaGGTTGTCTGGCACCGGTCGGAGGTCACTCACATCAATGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: FYDQTLVGHRMAENF*VVWHRSEVTHINGP Trigger: GGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCATAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CCA 72 bp | AGAAGTTCTATGATCAGACTCTGGTCGGTCACAGGATaGCAGAAAACTTCTTGGTTGTCTGGCACCGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSSMIRLWSVTG*QKTSWLSGTGR Trigger: CCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCATAGAACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS CCA 72 bp | TGGGCCTGCAGCTCCAGAAGTTCTATGATCAGACTCTaGTCGGTCACAGGATGGCAGAAAACTTCTTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: WACSSRSSMIRL*SVTGWQKTSWL Trigger: CAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCATAGAACTTCTGGAGCTGCAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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| CDS TCA 72 bp | CAGCTGTTCAAAGTTACTCAGGCTCCAAGGTGGACATaGCAGATTTTCAGGGCCAAGAGACCTGCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: QLFKVTQAPRWT*QIFRAKRPAVT Trigger: TGTCACAGCAGGTCTCTTGGCCCTGAAAATCTGTCATGTCCACCTTGGAGCCTGAGTAACTTTGAACAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038644.5 |
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