Pregenerated sensors for RANGAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022391Ensembl transcript IDs: ENSMUST00000052374.13, ENSMUST00000170134.9, ENSMUST00000171115.3, ENSMUST00000230302.2, ENSMUST00000230726.2
Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTaGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGCAGGG | + |
Preference number: 1 (lower is better) Translates to: QDPLPSSGQNIQWRC*PSSVHPRPSVTGAG Trigger: CCCTGCCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR GCA 90 bp | AGACAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATaGTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGCA | + |
Preference number: 1 (lower is better) Translates to: RQDPLPSSGQNIQWR*WPSSVHPRPSVTGA Trigger: TGCCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR CCA 90 bp | GGTGGGACAGGAAGGCAGGGCAGACAGGACAGCCAACGGGGCCTATaGCTAAGTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCT | + |
Preference number: 1 (lower is better) Translates to: GGTGRQGRQDSQRGL*LSWPKFNNKAAFYP Trigger: AGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCCCTGCCTTCCTGTCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR CCA 90 bp | CAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCTaGTCAAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCC | + |
Preference number: 1 (lower is better) Translates to: QRTNMTQETRPSPFL*SKYPMEMLAELSPS Trigger: GGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR-3UTR GCA 90 bp | GTTCAGGCATTAGGGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGGGGATTAAAGGCATGTaGCACCACGCCCGGCTGAGT | + |
Preference number: 2 (lower is better) Translates to: VQALGDLPFPPQEKNRAGGIKGM*HHARLS Trigger: ACTCAGCCGGGCGTGGTGGCACATGCCTTTAATCCC...CCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCCCTAATGCCTGAAC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | CTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTGAATTCCCCAGGCTTTaGTGGGACAGGAAGGCAGGG | + |
Preference number: 2 (lower is better) Translates to: LPFPPQEKNRAGPAKVLFEFPRL*WDRKAG Trigger: CCCTGCCTTCCTGTCCCACCAAAGCCTGGGGAATTC...AAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR CAA 90 bp | TGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTaGGTGGGACAGGAAGGCAGGGCAGACAGGACAGCCAACGGGGCC | + |
Preference number: 2 (lower is better) Translates to: CYLGTVDTAHRIPQA*VGQEGRADRTANGA Trigger: GGCCCCGTTGGCTGTCCTGTCTGCCCTGCCTTCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR-3UTR CCA 90 bp | CACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGGGAAGTCACTTCCCCAGGCTTTGGTaGGACAGGAAGGCAGGGCAG | + |
Preference number: 2 (lower is better) Translates to: HTTQREVGGGQAATSGSHFPRLW*DRKAGQ Trigger: CTGCCCTGCCTTCCTGTCCCACCAAAGCCTGGGGAA...GTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | CACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGGGAAGTCACCAGCTCCCACTCCCCTaGCTGCTCCTCCAAGTCACA | + |
Preference number: 2 (lower is better) Translates to: HTTQREVGGGQAATSGSHQLPLP*LLLQVT Trigger: TGTGACTTGGAGGAGCAGCCAGGGGAGTGGGAGCTG...GTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | GTTCAGGCATTAGGGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCTCCTCCAAGTCACATaGTTAAGGGCAGAGGTTTTT | + |
Preference number: 2 (lower is better) Translates to: VQALGDLPFPPQEKNRAGLLQVT*LRAEVF Trigger: AAAAACCTCTGCCCTTAACCATGTGACTTGGAGGAG...CCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCCCTAATGCCTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | GAGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCAAGACCCTCAGTCACTaGGGCAGGGCGAGGGACAAG | + |
Preference number: 2 (lower is better) Translates to: EHLLPGSIPITHSCLRKPKTLSH*GRARDK Trigger: CTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTT...GGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACAAAGACCCTCAGTCACTaGGGCAGGGCGAGGGACAAG | + |
Preference number: 2 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTKTLSH*GRARDK Trigger: CTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTT...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR-3UTR CCA 90 bp | CCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCAAGACCCTCAGTCACTaGGGCAGGGCGAGGGACAAG | + |
Preference number: 2 (lower is better) Translates to: PTQYQRTNMTQETRPSPFKTLSH*GRARDK Trigger: CTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTT...GAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR-3UTR CCA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGAATCAATTCCCCACAGTaGACTTGGGTTAGTCCAGCA | + |
Preference number: 2 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGINSPQ*TWVSPA Trigger: TGCTGGACTAACCCAAGTCCACTGTGGGGAATTGAT...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR-3UTR CCA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTGGAGAAGAACAGGGCTaGGCCAGCCAAGGTGCTTTT | + |
Preference number: 2 (lower is better) Translates to: SISYPAPSLLHTPVLENPGEEQG*ASQGAF Trigger: AAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCC...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | GAGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCCCCTCTCCCTTCCTCTaGTCAAAATATCCAATGGAG | + |
Preference number: 2 (lower is better) Translates to: EHLLPGSIPITHSCLRKPPSPFL*SKYPME Trigger: CTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGG...GGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR-3UTR CCA 90 bp | CCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATGACACAGGACCCTCTCCCTTCCTCTaGTCAAAATATCCAATGGAG | + |
Preference number: 2 (lower is better) Translates to: PTHTHQTNTVSKDQYDTGPSPFL*SKYPME Trigger: CTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGG...TCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR GCA 72 bp | CTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTaGTTTTTCCACCTGGTCCTAGAGCCAGGTTACCCC | + |
Preference number: 3 (lower is better) Translates to: LPRRRTGLGQPR*FFHLVLEPGYP Trigger: GGGGTAACCTGGCTCTAGGACCAGGTGGAAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR GCA 72 bp | CCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATaGTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTC | + |
Preference number: 3 (lower is better) Translates to: PLPSSGQNIQWR*WPSSVHPRPSV Trigger: GACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR CCA 72 bp | CTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTaGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACT | + |
Preference number: 3 (lower is better) Translates to: LPSSGQNIQWRC*PSSVHPRPSVT Trigger: AGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR CCA 72 bp | GGAAGGCAGGGCAGACAGGACAGCCAACGGGGCCTATaGCTAAGTTGGCCTAAGTTTAATAACAAAGCAGCT | + |
Preference number: 3 (lower is better) Translates to: GRQGRQDSQRGL*LSWPKFNNKAA Trigger: AGCTGCTTTGTTATTAAACTTAGGCCAACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCCCTGCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR-3UTR CAA 90 bp | TCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCAGAGAAGAATTCCCCAGGCTTaGGTGGGACAGGAAGGCAGG | + |
Preference number: 3 (lower is better) Translates to: SYPAPSLLHTPVLENPQRRIPQA*VGQEGR Trigger: CCTGCCTTCCTGTCCCACCAAAGCCTGGGGAATTCT...TCTCTGAGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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3UTR TCA 72 bp | TCCCCACAGTGGACTTGGGTTAGTCCAGCAGGGAGATaGAGATCTGCAATCCAGACAGGAAGTACATACCCA | + |
Preference number: 3 (lower is better) Translates to: SPQWTWVSPAGR*RSAIQTGSTYP Trigger: TGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTGCTGGACTAACCCAAGTCCACTGTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR CCA 72 bp | AATATGACACAGGAGACAAGACCCTCTCCCTTCCTCTaGTCAAAATATCCAATGGAGATGCTGGCCGAGCTC | + |
Preference number: 3 (lower is better) Translates to: NMTQETRPSPFL*SKYPMEMLAEL Trigger: GAGCTCGGCCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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3UTR CCA 72 bp | GGCAGACAGGACAGCCAACGGGGCCTATGGCTAAGTTaGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCT | + |
Preference number: 3 (lower is better) Translates to: GRQDSQRGLWLS*PKFNNKAAFYP Trigger: AGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTCCCCTGACCCTCTCTaGGGAGGCTCTTCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCSPDPL*GGSSSS Trigger: GGAAGAGGAAGAGCCTCCGCAGAGAGGGTCAGGGGA...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCAGGTGGAGAGGTCTGTaGGAGTCGGGGAGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCRWRGL*ESGRTA Trigger: TGCTGTCCTCCCCGACTCCCACAGACCTCTCCACCT...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCGCTTGCCTTGGGCACTaGACTTGCGGTGACACTCAG | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCACLGH*TCGDTQ Trigger: CTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGC...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTCCTGCCTCACCACGTaGTTCAACACCATCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCSCLTT*FNTIRG Trigger: CCCCCTGATGGTGTTGAACCACGTGGTGAGGCAGGA...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCGGAATGACAGGAAGGTaGAGAGGTCTGTGGGAGTCG | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCGMTGR*RGLWES Trigger: CGACTCCCACAGACCTCTCCACCTTCCTGTCATTCC...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | TCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGAGCAGGCTGGGCTCTTaGGGAGGGCCTCGAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: SNGDAGRAQSIQDPQSLGSRLGS*GGPRSL Trigger: GAGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCT...CCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTCGGAGGTATCAGTCTaGTGGACTATCAGCACCGAG | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCSEVSV*WTISTE Trigger: CTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGA...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR GCA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCGGGCTTTGTCACAAATaGCAAGAGCAGGGGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCGLCHK*QEQGCK Trigger: CTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCC...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | GAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGCAGGGCGGCTTGCCTTGGGCACTaGACTTGCGGTGACACTCAG | + |
Preference number: 4 (lower is better) Translates to: EMLAELSPSKTLSHWGRAACLGH*TCGDTQ Trigger: CTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGC...CGCCCTGCCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTCTCTGGGGAGGGGAATaGCAGGAAGGTGGAGAGGTC | + |
Preference number: 4 (lower is better) Translates to: LPFPPQEKNRAGPAKVLFLWGGE*QEGGEV Trigger: GACCTCTCCACCTTCCTGTCATTCCCCTCCCCAGAG...AAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAACTAAGGCCTTGGCGATaGCTCTGGCCGCTTCCACGC | + |
Preference number: 4 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKLRPWR*LWPLPR Trigger: GCGTGGAAGCGGCCAGAGTCATCGCCAAGGCCTTAG...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | TCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGAGGTGGAGAGGTCTGTaGGAGTCGGGGAGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: SNGDAGRAQSIQDPQSLGRWRGL*ESGRTA Trigger: TGCTGTCCTCCCCGACTCCCACAGACCTCTCCACCT...CCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTCTTGGGCACTGGACTTaGGGTGACACTCAGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: LPFPPQEKNRAGPAKVLFLGHWT*GDTQSE Trigger: CTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAG...AAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | GAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTCCACCTGGTCCTAGAGCCCTTCTGCCAGTGCAGTaGCTCCGTCATTCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: EKNRAGPAKVLFPPGPRALLPVQ*LRHSPG Trigger: GCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAG...GGCTCTAGGACCAGGTGGAAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | CTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTGTCTGCAGCAGATTGTaGCGGGCAAAGGAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: LPFPPQEKNRAGPAKVLFVCSRL*RAKEQV Trigger: AACCTGCTCCTTTGCCCGCCACAATCTGCTGCAGAC...AAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | GTTCAGGCATTAGGGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCCCACCCTTCTCAGTaGAGGTGTTGTCATTTAGGT | + |
Preference number: 4 (lower is better) Translates to: VQALGDLPFPPQEKNRAGPHPSQ*RCCHLG Trigger: ACCTAAATGACAACACCTTCACTGAGAAGGGTGGGG...CCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCCCTAATGCCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAACTCCCTCATCATCACTaGGGGATGCCAGCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKLPHHH*GMPAPW Trigger: CCAAGGTGCTGGCATCCCTCAGTGATGATGAGGGAG...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGACTCTGGGGAGGGGAATaGCAGGAAGGTGGAGAGGTC | + |
Preference number: 4 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGLWGGE*QEGGEV Trigger: GACCTCTCCACCTTCCTGTCATTCCCCTCCCCAGAG...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | TATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGTCAGGGCCAGGGGCTTaGCTTGGGCACTGGACTTGC | + |
Preference number: 4 (lower is better) Translates to: YLGTVDTAHRIPQALVGQSGPGA*LGHWTC Trigger: GCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGA...CTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | GTTCAGGCATTAGGGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGAAAAGCTTCTGCCAGTaGAGTGGCTCCGTCATTCTC | + |
Preference number: 4 (lower is better) Translates to: VQALGDLPFPPQEKNRAGKSFCQ*SGSVIL Trigger: GAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTT...CCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCCCTAATGCCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR GCA 90 bp | TCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGGATCCCAAAAGCTTCTaGCAGTGCAGTGGCTCCGTC | + |
Preference number: 4 (lower is better) Translates to: SNGDAGRAQSIQDPQSLGDPKSF*QCSGSV Trigger: GACGGAGCCACTGCACTGGCAGAAGCTTTTGGGATC...CCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGGGAAGTCACTTGATGGCAAAGGCCTaGGCCAGGGCTGTGACACCA | + |
Preference number: 4 (lower is better) Translates to: HTTQREVGGGQAATSGSHLMAKA*ARAVTP Trigger: TGGTGTCACAGCCCTGGCCCAGGCCTTTGCCATCAA...GTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAATCAGCTCCTTTAGCTTaGGCAGGCCACCACGGACAG | + |
Preference number: 4 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKSAPLA*AGHHGQ Trigger: CTGTCCGTGGTGGCCTGCCCAAGCTAAAGGAGCTGA...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTTTCTACCCTTCCCCTAGGCATCAATTCCCCACAGTGGACTTGGGTTAGTCCACTAAGGCCTTGGCGATaGCTCTGGCCGCTTCCACGC | + |
Preference number: 4 (lower is better) Translates to: LSTLPLGINSPQWTWVSPLRPWR*LWPLPR Trigger: GCGTGGAAGCGGCCAGAGTCATCGCCAAGGCCTTAG...TGGACTAACCCAAGTCCACTGTGGGGAATTGATGCCTAGGGGAAGGGTAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | GAGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCAGCAGGCTGGGCTCTTaGGGAGGGCCTCGAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: EHLLPGSIPITHSCLRKPSRLGS*GGPRSL Trigger: GAGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCT...GGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | AGGAGACAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTGGAGCAGGCTGGGCTCTTaGGGAGGGCCTCGAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: RRQDPLPSSGQNIQWRCWSRLGS*GGPRSL Trigger: GAGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCT...CCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | TCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGCACCTTCAGGAAGGCTaGAACAACCTTCTCTGGGTC | + |
Preference number: 4 (lower is better) Translates to: SNGDAGRAQSIQDPQSLGHLQEG*NNLLWV Trigger: GACCCAGAGAAGGTTGTTTCAGCCTTCCTGAAGGTG...CCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGAACCACGGACAGCATCTaGGATGGCAACGGCACCCTT | + |
Preference number: 4 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGTTDSI*DGNGTL Trigger: AAGGGTGCCGTTGCCATCGCAGATGCTGTCCGTGGT...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | GAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTCCACCTGGTCCTAGAGCCGGGTCTCTGCCAGTTTaGCAATGTCTTCAGAGGCCA | + |
Preference number: 4 (lower is better) Translates to: EKNRAGPAKVLFPPGPRAGSLPV*QCLQRP Trigger: TGGCCTCTGAAGACATTGCCAAACTGGCAGAGACCC...GGCTCTAGGACCAGGTGGAAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | CTTTCTACCCTTCCCCTAGGCATCAATTCCCCACAGTGGACTTGGGTTAGTCCAGGACAGCACGGGAGCTaGCTCCCCACTGTTAGGGTC | + |
Preference number: 4 (lower is better) Translates to: LSTLPLGINSPQWTWVSPGQHGS*LPTVRV Trigger: GACCCTAACAGTGGGGAGCCAGCTCCCGTGCTGTCC...TGGACTAACCCAAGTCCACTGTGGGGAATTGATGCCTAGGGGAAGGGTAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGTCAGCACCGAGACCTTaGGACCCAGACGCAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGSAPRP*DPDAAA Trigger: AGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGA...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAAGTCTGCAGCAGATTGTaGCGGGCAAAGGAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKVCSRL*RAKEQV Trigger: AACCTGCTCCTTTGCCCGCCACAATCTGCTGCAGAC...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGGCACTGGACTTGCGGTaGCACTCAGTCAGAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGALDLR*HSVRAA Trigger: AGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGC...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGACTTGGGCACTGGACTTaGGGTGACACTCAGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGLGHWT*GDTQSE Trigger: CTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAG...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CAGCCCAGACACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGAAAAGCTTCTGCCAGTaGAGTGGCTCCGTCATTCTC | + |
Preference number: 4 (lower is better) Translates to: QPRHTTQREVGGGQAATSKSFCQ*SGSVIL Trigger: GAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTT...CGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTGTCTGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR GCA 90 bp | CTCTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGTCCCCTGACCCTCTCTaGGGAGGCTCTTCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: LCYLGTVDTAHRIPQALVSPDPL*GGSSSS Trigger: GGAAGAGGAAGAGCCTCCGCAGAGAGGGTCAGGGGA...CACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGATGCCAAGAGCAGGGGTaGAAGGGCCTTGGGGAAATA | + |
Preference number: 4 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGCQEQG*KGLGEI Trigger: TATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCA...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGCTTCTGCCAGTGCAGTaGCTCCGTCATTCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGLLPVQ*LRHSPG Trigger: GCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAG...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGTTGATGGCAAAGGCCTaGGCCAGGGCTGTGACACCA | + |
Preference number: 4 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGLMAKA*ARAVTP Trigger: TGGTGTCACAGCCCTGGCCCAGGCCTTTGCCATCAA...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGGGAAGTCACTTGAGCAGACCCATGTaGATGAGCAGCCTGGTAAGG | + |
Preference number: 4 (lower is better) Translates to: HTTQREVGGGQAATSGSHLSRPM*MSSLVR Trigger: CCTTACCAGGCTGCTCATCCACATGGGTCTGCTCAA...GTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | CTTTCTACCCTTCCCCTAGGCATCAATTCCCCACAGTGGACTTGGGTTAGTCCACGAGGGCATTGCCATTaGGGTCCAGCTTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LSTLPLGINSPQWTWVSPRGHCH*GPASPA Trigger: AGCTGGAGAAGCTGGACCTCAATGGCAATGCCCTCG...TGGACTAACCCAAGTCCACTGTGGGGAATTGATGCCTAGGGGAAGGGTAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTCTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGCTGTCCATCACCTCCTaGAGCTGCTCACAGCCCTCT | + |
Preference number: 4 (lower is better) Translates to: LCYLGTVDTAHRIPQALVLSITS*SCSQPS Trigger: AGAGGGCTGTGAGCAGCTTCAGGAGGTGATGGACAG...CACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CAGCCCAGACACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGTTTAGCCAGGGTCTCTaGCAGTTTGGCAATGTCTTC | + |
Preference number: 4 (lower is better) Translates to: QPRHTTQREVGGGQAATSFSQGL*QFGNVF Trigger: GAAGACATTGCCAAACTGGCAGAGACCCTGGCTAAA...CGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTGTCTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR GCA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTTCAGGGCCAGGGGCTTaGCTTGGGCACTGGACTTGC | + |
Preference number: 4 (lower is better) Translates to: SISYPAPSLLHTPVLENPSGPGA*LGHWTC Trigger: GCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGA...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | CACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGGGAAGTCACAACATGTCACTCCAGTaGCATCGCTTCAGCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: HTTQREVGGGQAATSGSHNMSLQ*HRFSSD Trigger: GTCTGAGCTGAAGCGATGCCACTGGAGTGACATGTT...GTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | CTTTCTACCCTTCCCCTAGGCATCAATTCCCCACAGTGGACTTGGGTTAGTCCATTGATGGCAAAGGCCTaGGCCAGGGCTGTGACACCA | + |
Preference number: 4 (lower is better) Translates to: LSTLPLGINSPQWTWVSPLMAKA*ARAVTP Trigger: TGGTGTCACAGCCCTGGCCCAGGCCTTTGCCATCAA...TGGACTAACCCAAGTCCACTGTGGGGAATTGATGCCTAGGGGAAGGGTAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACGGACAGCACGGGAGCTaGCTCCCCACTGTTAGGGTC | + |
Preference number: 4 (lower is better) Translates to: REMKICNPDRKYIPTHTHGQHGS*LPTVRV Trigger: GACCCTAACAGTGGGGAGCCAGCTCCCGTGCTGTCC...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCATCAGCACCGAGACCTTaGGACCCAGACGCAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: KISNGDAGRAQSIQDPQSSAPRP*DPDAAA Trigger: AGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGA...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGCTAAGGCCTTGGCGATaGCTCTGGCCGCTTCCACGC | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRLRPWR*LWPLPR Trigger: GCGTGGAAGCGGCCAGAGTCATCGCCAAGGCCTTAG...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTCTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGACCGAAGCCTTCCTGTaGACATGTCACTCCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: LCYLGTVDTAHRIPQALVTEAFL*TCHSSG Trigger: GCCACTGGAGTGACATGTTCACAGGAAGGCTTCGGT...CACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGCTCGCAACAGGGGGTTaGTGGCAAAGGCCTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRLATGG*WQRPGP Trigger: TGGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAG...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CAAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTCGCAACAGGGGGTTaGTGGCAAAGGCCTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: QTNTVSKDQYDTGDKTLSLATGG*WQRPGP Trigger: TGGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAG...GGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | AGGAGACAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTGGCTGTCCATCACCTCCTaGAGCTGCTCACAGCCCTCT | + |
Preference number: 4 (lower is better) Translates to: RRQDPLPSSGQNIQWRCWLSITS*SCSQPS Trigger: AGAGGGCTGTGAGCAGCTTCAGGAGGTGATGGACAG...CCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACTCTGGGGAGGGGAATaGCAGGAAGGTGGAGAGGTC | + |
Preference number: 4 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTLWGGE*QEGGEV Trigger: GACCTCTCCACCTTCCTGTCATTCCCCTCCCCAGAG...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGTCAGGGCCAGGGGCTTaGCTTGGGCACTGGACTTGC | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRSGPGA*LGHWTC Trigger: GCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGA...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACTCCCCTGACCCTCTCTaGGGAGGCTCTTCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: REMKICNPDRKYIPTHTHSPDPL*GGSSSS Trigger: GGAAGAGGAAGAGCCTCCGCAGAGAGGGTCAGGGGA...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCATCAGCTCCTTTAGCTTaGGCAGGCCACCACGGACAG | + |
Preference number: 4 (lower is better) Translates to: KISNGDAGRAQSIQDPQSSAPLA*AGHHGQ Trigger: CTGTCCGTGGTGGCCTGCCCAAGCTAAAGGAGCTGA...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAGGACAGCACGGGAGCTaGCTCCCCACTGTTAGGGTC | + |
Preference number: 4 (lower is better) Translates to: QEVHTHTHTPNQHSIKGPGQHGS*LPTVRV Trigger: GACCCTAACAGTGGGGAGCCAGCTCCCGTGCTGTCC...TGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACAAGGTGGAGAGGTCTGTaGGAGTCGGGGAGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTRWRGL*ESGRTA Trigger: TGCTGTCCTCCCCGACTCCCACAGACCTCTCCACCT...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCGAGGGCATTGCCATTaGGGTCCAGCTTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: SISYPAPSLLHTPVLENPRGHCH*GPASPA Trigger: AGCTGGAGAAGCTGGACCTCAATGGCAATGCCCTCG...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACTGTCCATCACCTCCTaGAGCTGCTCACAGCCCTCT | + |
Preference number: 4 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTLSITS*SCSQPS Trigger: AGAGGGCTGTGAGCAGCTTCAGGAGGTGATGGACAG...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCCCTCATCATCACTaGGGGATGCCAGCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: PTQYQRTNMTQETRPSPFLPHHH*GMPAPW Trigger: CCAAGGTGCTGGCATCCCTCAGTGATGATGAGGGAG...GAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGAAAAGCTTCTGCCAGTaGAGTGGCTCCGTCATTCTC | + |
Preference number: 4 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGKSFCQ*SGSVIL Trigger: GAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTT...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACCGTTCTGTGGCATATaGACCTCTTCCAGAGTCCCG | + |
Preference number: 4 (lower is better) Translates to: KISNGDAGRAQSIQDPQSPFCGI*TSSRVP Trigger: CGGGACTCTGGAAGAGGTGCATATGCCACAGAACGG...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AGGAGACAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTGGCCGTTCTGTGGCATATaGACCTCTTCCAGAGTCCCG | + |
Preference number: 4 (lower is better) Translates to: RRQDPLPSSGQNIQWRCWPFCGI*TSSRVP Trigger: CGGGACTCTGGAAGAGGTGCATATGCCACAGAACGG...CCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGAATCATCACTGAGGGATaGCAGCACCTTGGCCATATT | + |
Preference number: 4 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGIITEG*QHLGHI Trigger: AATATGGCCAAGGTGCTGGCATCCCTCAGTGATGAT...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCGCTTGCCTTGGGCACTaGACTTGCGGTGACACTCAG | + |
Preference number: 4 (lower is better) Translates to: TQYQRTNMTQETRPSPFLACLGH*TCGDTQ Trigger: CTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGC...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTCAGCACCGAGACCTTaGGACCCAGACGCAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: KPTQYQRTNMTQETRPSPSAPRP*DPDAAA Trigger: AGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGA...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTTCCTGCCTCACCACGTaGTTCAACACCATCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: SISYPAPSLLHTPVLENPSCLTT*FNTIRG Trigger: CCCCCTGATGGTGTTGAACCACGTGGTGAGGCAGGA...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACTCCTGCCTCACCACGTaGTTCAACACCATCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: REMKICNPDRKYIPTHTHSCLTT*FNTIRG Trigger: CCCCCTGATGGTGTTGAACCACGTGGTGAGGCAGGA...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | TGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATTCCTCGCAACAGGGGGTTaGTGGCAAAGGCCTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: WPKFNNKAAFYPSPRHQFLATGG*WQRPGP Trigger: TGGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAG...GAATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGGGCAGTCTCCAAAATTaGTCACTTCCACTTGTCGCA | + |
Preference number: 4 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGGSLQN*SLPLVA Trigger: TGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCC...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCCGAGGGCATTGCCATTaGGGTCCAGCTTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: KPTQYQRTNMTQETRPSPRGHCH*GPASPA Trigger: AGCTGGAGAAGCTGGACCTCAATGGCAATGCCCTCG...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCCAGTTCCACCAGCTGTaGTCCTGCAGTGATGAGTCC | + |
Preference number: 4 (lower is better) Translates to: TQYQRTNMTQETRPSPFLQFHQL*SCSDES Trigger: GGACTCATCACTGCAGGAGCACAGCTGGTGGAACTG...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | GAGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCACACTCAGTCAGAGCTaGTGCCAGAATCTTGCCACC | + |
Preference number: 4 (lower is better) Translates to: EHLLPGSIPITHSCLRKPTLSQS*CQNLAT Trigger: GGTGGCAAGATTCTGGCAGCAGCTCTGACTGAGTGT...GGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR GCA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACCTTGGGCACTGGACTTaGGGTGACACTCAGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: REMKICNPDRKYIPTHTHLGHWT*GDTQSE Trigger: CTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAG...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCCGTTCTGTGGCATATaGACCTCTTCCAGAGTCCCG | + |
Preference number: 4 (lower is better) Translates to: SISYPAPSLLHTPVLENPPFCGI*TSSRVP Trigger: CGGGACTCTGGAAGAGGTGCATATGCCACAGAACGG...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR GCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCACGGACAGCATCTaGGATGGCAACGGCACCCTT | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRTTDSI*DGNGTL Trigger: AAGGGTGCCGTTGCCATCGCAGATGCTGTCCGTGGT...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AGGAGACAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTGGTCGGAGGTATCAGTCTaGTGGACTATCAGCACCGAG | + |
Preference number: 4 (lower is better) Translates to: RRQDPLPSSGQNIQWRCWSEVSV*WTISTE Trigger: CTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGA...CCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACATGCCAAGAGCAGGGGTaGAAGGGCCTTGGGGAAATA | + |
Preference number: 4 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTCQEQG*KGLGEI Trigger: TATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCA...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCCTTCTGCCAGTGCAGTaGCTCCGTCATTCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: KPTQYQRTNMTQETRPSPLLPVQ*LRHSPG Trigger: GCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAG...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | TCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCAGAGAGGAATGACAGGAAGGTaGAGAGGTCTGTGGGAGTCG | + |
Preference number: 4 (lower is better) Translates to: SYPAPSLLHTPVLENPQRGMTGR*RGLWES Trigger: CGACTCCCACAGACCTCTCCACCTTCCTGTCATTCC...TCTCTGAGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCGGAATGACAGGAAGGTaGAGAGGTCTGTGGGAGTCG | + |
Preference number: 4 (lower is better) Translates to: TQYQRTNMTQETRPSPFLGMTGR*RGLWES Trigger: CGACTCCCACAGACCTCTCCACCTTCCTGTCATTCC...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | GAGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTTGAGCAGACCCATGTaGATGAGCAGCCTGGTAAGG | + |
Preference number: 4 (lower is better) Translates to: EHLLPGSIPITHSCLRKPLSRPM*MSSLVR Trigger: CCTTACCAGGCTGCTCATCCACATGGGTCTGCTCAA...GGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CCA 90 bp | CCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCGTCTGCAGCAGATTGTaGCGGGCAAAGGAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: PTQYQRTNMTQETRPSPFVCSRL*RAKEQV Trigger: AACCTGCTCCTTTGCCCGCCACAATCTGCTGCAGAC...GAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CTTTCTACCCTTCCCCTAGGCATCAATTCCCCACAGTGGACTTGGGTTAGTCCAGGCAGTCTCCAAAATTaGTCACTTCCACTTGTCGCA | + |
Preference number: 4 (lower is better) Translates to: LSTLPLGINSPQWTWVSPGSLQN*SLPLVA Trigger: TGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCC...TGGACTAACCCAAGTCCACTGTGGGGAATTGATGCCTAGGGGAAGGGTAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAGATCCCAAAAGCTTCTaGCAGTGCAGTGGCTCCGTC | + |
Preference number: 4 (lower is better) Translates to: QEVHTHTHTPNQHSIKGPDPKSF*QCSGSV Trigger: GACGGAGCCACTGCACTGGCAGAAGCTTTTGGGATC...TGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CTCTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGATCATCACTGAGGGATaGCAGCACCTTGGCCATATT | + |
Preference number: 4 (lower is better) Translates to: LCYLGTVDTAHRIPQALVIITEG*QHLGHI Trigger: AATATGGCCAAGGTGCTGGCATCCCTCAGTGATGAT...CACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATGCACTGGACTTGCGGTaGCACTCAGTCAGAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: VGLSLITKQLSTLPLGINALDLR*HSVRAA Trigger: AGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGC...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | TGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATTCGCACTGGACTTGCGGTaGCACTCAGTCAGAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: WPKFNNKAAFYPSPRHQFALDLR*HSVRAA Trigger: AGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGC...GAATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | TCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCAGAGACCCCACCCTTCTCAGTaGAGGTGTTGTCATTTAGGT | + |
Preference number: 4 (lower is better) Translates to: SYPAPSLLHTPVLENPQRPHPSQ*RCCHLG Trigger: ACCTAAATGACAACACCTTCACTGAGAAGGGTGGGG...TCTCTGAGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACCCCACCCTTCTCAGTaGAGGTGTTGTCATTTAGGT | + |
Preference number: 4 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTPHPSQ*RCCHLG Trigger: ACCTAAATGACAACACCTTCACTGAGAAGGGTGGGG...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGCACCTTCAGGAAGGCTaGAACAACCTTCTCTGGGTC | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRHLQEG*NNLLWV Trigger: GACCCAGAGAAGGTTGTTTCAGCCTTCCTGAAGGTG...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATACCACGGACAGCATCTaGGATGGCAACGGCACCCTT | + |
Preference number: 4 (lower is better) Translates to: VGLSLITKQLSTLPLGINTTDSI*DGNGTL Trigger: AAGGGTGCCGTTGCCATCGCAGATGCTGTCCGTGGT...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGGGGCTTTGTCACAAATaGCAAGAGCAGGGGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRGLCHK*QEQGCK Trigger: CTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCC...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCGGGTCTCTGCCAGTTTaGCAATGTCTTCAGAGGCCA | + |
Preference number: 4 (lower is better) Translates to: KPTQYQRTNMTQETRPSPGSLPV*QCLQRP Trigger: TGGCCTCTGAAGACATTGCCAAACTGGCAGAGACCC...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATGACACAGGAGGGTCTCTGCCAGTTTaGCAATGTCTTCAGAGGCCA | + |
Preference number: 4 (lower is better) Translates to: PTHTHQTNTVSKDQYDTGGSLPV*QCLQRP Trigger: TGGCCTCTGAAGACATTGCCAAACTGGCAGAGACCC...TCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | TGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATTCTCAGCTCCTTTAGCTTaGGCAGGCCACCACGGACAG | + |
Preference number: 4 (lower is better) Translates to: WPKFNNKAAFYPSPRHQFSAPLA*AGHHGQ Trigger: CTGTCCGTGGTGGCCTGCCCAAGCTAAAGGAGCTGA...GAATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | CAAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCTTGAGCAGACCCATGTaGATGAGCAGCCTGGTAAGG | + |
Preference number: 4 (lower is better) Translates to: QTNTVSKDQYDTGDKTLSLSRPM*MSSLVR Trigger: CCTTACCAGGCTGCTCATCCACATGGGTCTGCTCAA...GGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATACCGAAGCCTTCCTGTaGACATGTCACTCCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: VGLSLITKQLSTLPLGINTEAFL*TCHSSG Trigger: GCCACTGGAGTGACATGTTCACAGGAAGGCTTCGGT...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | AAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATCTCCCTCATCATCACTaGGGGATGCCAGCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: KYIPTHTHQTNTVSKDQYLPHHH*GMPAPW Trigger: CCAAGGTGCTGGCATCCCTCAGTGATGATGAGGGAG...ATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATCAGTTCCACCAGCTGTaGTCCTGCAGTGATGAGTCC | + |
Preference number: 4 (lower is better) Translates to: VGLSLITKQLSTLPLGINQFHQL*SCSDES Trigger: GGACTCATCACTGCAGGAGCACAGCTGGTGGAACTG...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACATCATCACTGAGGGATaGCAGCACCTTGGCCATATT | + |
Preference number: 4 (lower is better) Translates to: REMKICNPDRKYIPTHTHIITEG*QHLGHI Trigger: AATATGGCCAAGGTGCTGGCATCCCTCAGTGATGAT...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CCA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCAACATGTCACTCCAGTaGCATCGCTTCAGCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: KPTQYQRTNMTQETRPSPNMSLQ*HRFSSD Trigger: GTCTGAGCTGAAGCGATGCCACTGGAGTGACATGTT...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR TCA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGGGCAGTCTCCAAAATTaGTCACTTCCACTTGTCGCA | + |
Preference number: 4 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRGSLQN*SLPLVA Trigger: TGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCC...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | CCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATGACACAGGATTTAGCCAGGGTCTCTaGCAGTTTGGCAATGTCTTC | + |
Preference number: 4 (lower is better) Translates to: PTHTHQTNTVSKDQYDTGFSQGL*QFGNVF Trigger: GAAGACATTGCCAAACTGGCAGAGACCCTGGCTAAA...TCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATTGCCAAGAGCAGGGGTaGAAGGGCCTTGGGGAAATA | + |
Preference number: 4 (lower is better) Translates to: KYIPTHTHQTNTVSKDQYCQEQG*KGLGEI Trigger: TATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCA...ATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | TGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATTCGGGCTTTGTCACAAATaGCAAGAGCAGGGGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: WPKFNNKAAFYPSPRHQFGLCHK*QEQGCK Trigger: CTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCC...GAATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR GCA 90 bp | AAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATTCGGAGGTATCAGTCTaGTGGACTATCAGCACCGAG | + |
Preference number: 4 (lower is better) Translates to: KYIPTHTHQTNTVSKDQYSEVSV*WTISTE Trigger: CTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGA...ATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 90 bp | GTTAGGGTCCAGGATCTTCCTCGAGGGTGTAGCCGGCTCCTCCCCTaGCCCTCTCTGCGGAGGCTCTTCCTCTTCCTCCTGCTCCTCCTC | + |
Preference number: 5 (lower is better) Translates to: VRVQDLPRGCSRLLP*PSLRRLFLFLLLLL Trigger: GAGGAGGAGCAGGAGGAAGAGGAAGAGCCTCCGCAGAGAGGGTCAGGGGAGGAGCCGGCTACACCCTCGAGGAAGATCCTGGACCCTAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTTTTAAGCAGGCTGGGCTCTaGAGGAGGGCCTCGAAGCCT | + |
Preference number: 5 (lower is better) Translates to: LPFPPQEKNRAGPAKVLFKQAGL*RRASKP Trigger: AGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCTT...AAAAAGCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS GCA 90 bp | CCAGGCGATTTCTGCCAGCCACAAACACCTTCAGGGCCAGGGGCTTaGCTTGGGCACTGGACTTGCGGTGACACTCAGTCAGAGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: PGDFCQPQTPSGPGA*LGHWTCGDTQSELL Trigger: CAGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGAAGGTGTTTGTGGCTGGCAGAAATCGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS-3UTR CAA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCAGGCTGGGTATGGCCTaGATCTTGTCTTCACTCTTG | + |
Preference number: 5 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCRLGMA*ILSSLL Trigger: CAAGAGTGAAGACAAGATCAAGGCCATACCCAGCCT...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS GCA 90 bp | GCTCTTGAGGAGGGCCTCGAAGCCTCGCACTCCATCGGGTCCAAATaGGTTGTCACTGAGGTCCAGTTCCACCAGCTGTGCTCCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: ALEEGLEASHSIGSK*VVTEVQFHQLCSCS Trigger: ACTGCAGGAGCACAGCTGGTGGAACTGGACCTCAGTGACAACGCATTTGGACCCGATGGAGTGCGAGGCTTCGAGGCCCTCCTCAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CCA 90 bp | CTGGGTCGGAGGTATCAGTCTGCTGGACTATCAGCACCGAGACCTTaGGACCCAGACGCAGCAGCTTCTCTGGGGAGGGGAATGACAGGA | + |
Preference number: 5 (lower is better) Translates to: LGRRYQSAGLSAPRP*DPDAAASLGRGMTG Trigger: TCCTGTCATTCCCCTCCCCAGAGAAGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 90 bp | GCAGCAGATTGTGGCGGGCAAAGGAGCAGGTTTCCAGCGCGCCATTaGGCTTTGTCACAAATGCCAAGAGCAGGGGTGCAAGGGCCTTGG | + |
Preference number: 5 (lower is better) Translates to: AADCGGQRSRFPARH*ALSQMPRAGVQGPW Trigger: CCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCCCGCCACAATCTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GGTGGGACAGGAAGGCAGGGCAGACAGGACAGCCAACGGGGCCTATGGCTAAGTAGGGTCTCTGCCAGTTaGGCAATGTCTTCAGAGGCC | + |
Preference number: 5 (lower is better) Translates to: GGTGRQGRQDSQRGLWLSRVSAS*AMSSEA Trigger: GGCCTCTGAAGACATTGCCAAACTGGCAGAGACCCT...ACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCCCTGCCTTCCTGTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GGTGGGACAGGAAGGCAGGGCAGACAGGACAGCCAACGGGGCCTATGGCTAAGTTTCTTCTCTAAGGCCTaGGCGATGACTCTGGCCGCT | + |
Preference number: 5 (lower is better) Translates to: GGTGRQGRQDSQRGLWLSFFSKA*AMTLAA Trigger: AGCGGCCAGAGTCATCGCCAAGGCCTTAGAGAAGAA...ACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCCCTGCCTTCCTGTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAAACTCGCAACAGGGGGTaGATGGCAAAGGCCTGGGCC | + |
Preference number: 5 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKTRNRG*MAKAWA Trigger: GGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAGT...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCCTGGTAAGGAAGGTGTaGGAATTGAAAGAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCLVRKV*ELKEEQ Trigger: CTGCTCCTCTTTCAATTCCAACACCTTCCTTACCAG...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS GCA 90 bp | GGCAAAGGAGCAGGTTTCCAGCGCGCCATTGGGCTTTGTCACAAATaGCAAGAGCAGGGGTGCAAGGGCCTTGGGGAAATAGTCCTGCCT | + |
Preference number: 5 (lower is better) Translates to: GKGAGFQRAIGLCHK*QEQGCKGLGEIVLP Trigger: AGGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 90 bp | AGGGGGTTGATGGCAAAGGCCTGGGCCAGGGCTGTGACACCAGGATaGTTAATTCCGTTCTGTGGCATATGCACCTCTTCCAGAGTCCCG | + |
Preference number: 5 (lower is better) Translates to: RGLMAKAWARAVTPG*LIPFCGICTSSRVP Trigger: CGGGACTCTGGAAGAGGTGCATATGCCACAGAACGGAATTAACCATCCTGGTGTCACAGCCCTGGCCCAGGCCTTTGCCATCAACCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS-3UTR CAA 90 bp | GAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGCAGGGCGCCACAGTTGTTAAGCTaGAGTTCCTGTAGGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: EMLAELSPSKTLSHWGRAPQLLS*SSCRVK Trigger: CTTCACCCTACAGGAACTCAAGCTTAACAACTGTGG...CGCCCTGCCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGCAGGGCGATGCCCATGCCACAGTaGTTAAGCTTGAGTTCCTGT | + |
Preference number: 5 (lower is better) Translates to: EMLAELSPSKTLSHWGRAMPMPQ*LSLSSC Trigger: ACAGGAACTCAAGCTTAACAACTGTGGCATGGGCAT...CGCCCTGCCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 90 bp | TTCAGGAAGGCTGAAACAACCTTCTCTGGGTCGGAGGTATCAGTCTaGTGGACTATCAGCACCGAGACCTTGGGACCCAGACGCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: FRKAETTFSGSEVSV*WTISTETLGPRRSS Trigger: GCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGACCCAGAGAAGGTTGTTTCAGCCTTCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 90 bp | TTCCAGCGCGCCATTGGGCTTTGTCACAAATGCCAAGAGCAGGGGTaGAAGGGCCTTGGGGAAATAGTCCTGCCTCACCACGTGGTTCAA | + |
Preference number: 5 (lower is better) Translates to: FQRAIGLCHKCQEQG*KGLGEIVLPHHVVQ Trigger: TTGAACCACGTGGTGAGGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 90 bp | AGGAAGGCTGAAACAACCTTCTCTGGGTCGGAGGTATCAGTCTGCTaGACTATCAGCACCGAGACCTTGGGACCCAGACGCAGCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: RKAETTFSGSEVSVC*TISTETLGPRRSSF Trigger: GAAGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGACCCAGAGAAGGTTGTTTCAGCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CTCTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGCTGCTGCCAGAATCTaGCCACCCCCGATGCCCATG | + |
Preference number: 5 (lower is better) Translates to: LCYLGTVDTAHRIPQALVAAARI*PPPMPM Trigger: CATGGGCATCGGGGGTGGCAAGATTCTGGCAGCAGC...CACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CTTTCTACCCTTCCCCTAGGCATCAATTCCCCACAGTGGACTTGGGTTAGTCCAGCTGCTGCCAGAATCTaGCCACCCCCGATGCCCATG | + |
Preference number: 5 (lower is better) Translates to: LSTLPLGINSPQWTWVSPAAARI*PPPMPM Trigger: CATGGGCATCGGGGGTGGCAAGATTCTGGCAGCAGC...TGGACTAACCCAAGTCCACTGTGGGGAATTGATGCCTAGGGGAAGGGTAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GGGACCTGCCCTTCCCTCCCCAGGAGAAGAACAGGGCTGGGCCAGCCAAGGTGCTTCTCAGTGAAGGTGTaGTCATTTAGGTTGATGACT | + |
Preference number: 5 (lower is better) Translates to: GTCPSLPRRRTGLGQPRCFSVKV*SFRLMT Trigger: AGTCATCAACCTAAATGACAACACCTTCACTGAGAA...GCACCTTGGCTGGCCCAGCCCTGTTCTTCTCCTGGGGAGGGAAGGGCAGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGTTCTCCAGCTCAGCCTaGTCGGCCACAGCCTCAGCA | + |
Preference number: 5 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGFSSSA*SATASA Trigger: TGCTGAGGCTGTGGCCGACAAGGCTGAGCTGGAGAA...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAAGTTTCCAGCGCGCCATaGGGCTTTGTCACAAATGCC | + |
Preference number: 5 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKVSSAP*GFVTNA Trigger: GGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAAC...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 90 bp | CCTTGTCGGCCACAGCCTCAGCAACAACCAGGGCAGCATCTCTCTTaGTTTCGCAGAACGACAGATTCAGCTCCTTTAGCTTGGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: PCRPQPQQQPGQHLS*FRRTTDSAPLAWAG Trigger: GCCTGCCCAAGCTAAAGGAGCTGAATCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCTGGTTGTTGCTGAGGCTGTGGCCGACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 90 bp | TGGCATATGCACCTCTTCCAGAGTCCCGATGATCCCAAAAGCTTCTaGCAGTGCAGTGGCTCCGTCATTCTCCAGGCGATTTCTGCCAGC | + |
Preference number: 5 (lower is better) Translates to: WHMHLFQSPDDPKSF*QCSGSVILQAISAS Trigger: GCTGGCAGAAATCGCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTTGGGATCATCGGGACTCTGGAAGAGGTGCATATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CCA 90 bp | GGCCTGGGCCAGGGCTGTGACACCAGGATGGTTAATTCCGTTCTGTaGCATATGCACCTCTTCCAGAGTCCCGATGATCCCAAAAGCTTC | + |
Preference number: 5 (lower is better) Translates to: GLGQGCDTRMVNSVL*HMHLFQSPDDPKSF Trigger: GAAGCTTTTGGGATCATCGGGACTCTGGAAGAGGTGCATATGCCACAGAACGGAATTAACCATCCTGGTGTCACAGCCCTGGCCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CCA 90 bp | CATTGGGCTTTGTCACAAATGCCAAGAGCAGGGGTGCAAGGGCCTTaGGGAAATAGTCCTGCCTCACCACGTGGTTCAACACCATCAGGG | + |
Preference number: 5 (lower is better) Translates to: HWALSQMPRAGVQGP*GNSPASPRGSTPSG Trigger: CCCTGATGGTGTTGAACCACGTGGTGAGGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGATTCTTCTCTAAGGCCTaGGCGATGACTCTGGCCGCT | + |
Preference number: 5 (lower is better) Translates to: FRHGGHSTQNSPGFGGTGFFSKA*AMTLAA Trigger: AGCGGCCAGAGTCATCGCCAAGGCCTTAGAGAAGAA...TCCTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCACTGGGGGTGTTGTCATTTAGGTaGATGACTCGCAACAGGGGG | + |
Preference number: 5 (lower is better) Translates to: SNGDAGRAQSIQDPQSLGVLSFR*MTRNRG Trigger: CCCCCTGTTGCGAGTCATCAACCTAAATGACAACAC...CCCCAGTGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 90 bp | ATGCACCTCTTCCAGAGTCCCGATGATCCCAAAAGCTTCTGCCAGTaGAGTGGCTCCGTCATTCTCCAGGCGATTTCTGCCAGCCACAAA | + |
Preference number: 5 (lower is better) Translates to: MHLFQSPDDPKSFCQ*SGSVILQAISASHK Trigger: TTTGTGGCTGGCAGAAATCGCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTTGGGATCATCGGGACTCTGGAAGAGGTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CCA 90 bp | TCATTTAGGTTGATGACTCGCAACAGGGGGTTGATGGCAAAGGCCTaGGCCAGGGCTGTGACACCAGGATGGTTAATTCCGTTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: SFRLMTRNRGLMAKA*ARAVTPGWLIPFCG Trigger: GCCACAGAACGGAATTAACCATCCTGGTGTCACAGCCCTGGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAGTCATCAACCTAAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS-3UTR CAA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCATCCACGCCCACCGTGTaGCCCTCCAATCGTAGAGCT | + |
Preference number: 5 (lower is better) Translates to: KISNGDAGRAQSIQDPQSSTPTV*PSNRRA Trigger: AGCTCTACGATTGGAGGGCAACACGGTGGGCGTGGA...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGTTCTTCTCTAAGGCCTaGGCGATGACTCTGGCCGCT | + |
Preference number: 5 (lower is better) Translates to: YLGTVDTAHRIPQALVGQFFSKA*AMTLAA Trigger: AGCGGCCAGAGTCATCGCCAAGGCCTTAGAGAAGAA...CTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCAGAGAAAGCAGGCTGGGCTCTaGAGGAGGGCCTCGAAGCCT | + |
Preference number: 5 (lower is better) Translates to: SYPAPSLLHTPVLENPQRKQAGL*RRASKP Trigger: AGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCTT...TCTCTGAGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | CAGCCCAGACACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGCCACAGTTGTTAAGCTaGAGTTCCTGTAGGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: QPRHTTQREVGGGQAATSPQLLS*SSCRVK Trigger: CTTCACCCTACAGGAACTCAAGCTTAACAACTGTGG...CGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTGTCTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTACTCGCAACAGGGGGTaGATGGCAAAGGCCTGGGCC | + |
Preference number: 5 (lower is better) Translates to: SISYPAPSLLHTPVLENPTRNRG*MAKAWA Trigger: GGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAGT...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | CAAGACCCTCAGTCACTGGGGCAGGGCGAGGGACAAGAAGCAGCTGCCTTTAAAGTGTTGTCATTTAGGTaGATGACTCGCAACAGGGGG | + |
Preference number: 5 (lower is better) Translates to: QDPQSLGQGEGQEAAAFKVLSFR*MTRNRG Trigger: CCCCCTGTTGCGAGTCATCAACCTAAATGACAACAC...TTTAAAGGCAGCTGCTTCTTGTCCCTCGCCCTGCCCCAGTGACTGAGGGTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGTCTTCTCCGAGGGCATaGCCATTGAGGTCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGSSPRA*PLRSSF Trigger: GAAGCTGGACCTCAATGGCAATGCCCTCGGAGAAGA...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGACAGGTTTCCAGCGCGCCATaGGGCTTTGTCACAAATGCC | + |
Preference number: 5 (lower is better) Translates to: YLGTVDTAHRIPQALVGQVSSAP*GFVTNA Trigger: GGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAAC...CTGTCCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCAAGCGTCTGCAGCAGATaGTGGCGGGCAAAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: KISNGDAGRAQSIQDPQSSVCSR*WRAKEQ Trigger: CTGCTCCTTTGCCCGCCACAATCTGCTGCAGACGCT...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 90 bp | CATCGATGGCATCCAGCACTGCGGTCTTTACTGAGGCGTCATCCCTaGACACAGATGCCACCTTCAGGAAGGCTGAAACAACCTTCTCTG | + |
Preference number: 5 (lower is better) Translates to: HRWHPALRSLLRRHP*TQMPPSGRLKQPSL Trigger: CAGAGAAGGTTGTTTCAGCCTTCCTGAAGGTGGCATCTGTGTTCAGGGATGACGCCTCAGTAAAGACCGCAGTGCTGGATGCCATCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 90 bp | GCCAGGGCTGTGACACCAGGATGGTTAATTCCGTTCTGTGGCATATaGACCTCTTCCAGAGTCCCGATGATCCCAAAAGCTTCTGCCAGT | + |
Preference number: 5 (lower is better) Translates to: ARAVTPGWLIPFCGI*TSSRVPMIPKASAS Trigger: ACTGGCAGAAGCTTTTGGGATCATCGGGACTCTGGAAGAGGTGCATATGCCACAGAACGGAATTAACCATCCTGGTGTCACAGCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS-3UTR CAA 90 bp | CACACAACACAACGGGAAGTAGGAGGTGGCCAAGCAGCCACTTCGGGAAGTCACCCACAGTTGTTAAGCTaGAGTTCCTGTAGGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: HTTQREVGGGQAATSGSHPQLLS*SSCRVK Trigger: CTTCACCCTACAGGAACTCAAGCTTAACAACTGTGG...GTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTGTTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | CCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATGACACAGGAGCTGCTGCCAGAATCTaGCCACCCCCGATGCCCATG | + |
Preference number: 5 (lower is better) Translates to: PTHTHQTNTVSKDQYDTGAAARI*PPPMPM Trigger: CATGGGCATCGGGGGTGGCAAGATTCTGGCAGCAGC...TCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTAGCGTCTGCAGCAGATaGTGGCGGGCAAAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: SISYPAPSLLHTPVLENPSVCSR*WRAKEQ Trigger: CTGCTCCTTTGCCCGCCACAATCTGCTGCAGACGCT...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACAAGCGTCTGCAGCAGATaGTGGCGGGCAAAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTSVCSR*WRAKEQ Trigger: CTGCTCCTTTGCCCGCCACAATCTGCTGCAGACGCT...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 90 bp | CTAGTGAGATCAGAGCTGGTGGGATCTCAGACCGAAGCCTTCCTGTaGACATGTCACTCCAGTGGCATCGCTTCAGCTCAGACTTCTTCT | + |
Preference number: 5 (lower is better) Translates to: LVRSELVGSQTEAFL*TCHSSGIASAQTSS Trigger: AGAAGAAGTCTGAGCTGAAGCGATGCCACTGGAGTGACATGTTCACAGGAAGGCTTCGGTCTGAGATCCCACCAGCTCTGATCTCACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS-3UTR CAA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTCCACGCCCACCGTGTaGCCCTCCAATCGTAGAGCT | + |
Preference number: 5 (lower is better) Translates to: KPTQYQRTNMTQETRPSPSTPTV*PSNRRA Trigger: AGCTCTACGATTGGAGGGCAACACGGTGGGCGTGGA...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGAGGGCAGCATCTCTCTaGATTTCGCAGAACGACAGA | + |
Preference number: 5 (lower is better) Translates to: LLFRHGGHSTQNSPGFGGRAASL*ISQNDR Trigger: TCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCT...CCCACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCAAGGGATGCCAGCACCTaGGCCATATTGAAGCTGTCC | + |
Preference number: 5 (lower is better) Translates to: KISNGDAGRAQSIQDPQSRDAST*AILKLS Trigger: GGACAGCTTCAATATGGCCAAGGTGCTGGCATCCCT...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTCAGAGAAGGGTCTCTGCCAGTTaGGCAATGTCTTCAGAGGCC | + |
Preference number: 5 (lower is better) Translates to: SYPAPSLLHTPVLENPQRRVSAS*AMSSEA Trigger: GGCCTCTGAAGACATTGCCAAACTGGCAGAGACCCT...TCTCTGAGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACAGGGTCTCTGCCAGTTaGGCAATGTCTTCAGAGGCC | + |
Preference number: 5 (lower is better) Translates to: REMKICNPDRKYIPTHTHRVSAS*AMSSEA Trigger: GGCCTCTGAAGACATTGCCAAACTGGCAGAGACCCT...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATAAGCAGGCTGGGCTCTaGAGGAGGGCCTCGAAGCCT | + |
Preference number: 5 (lower is better) Translates to: VGLSLITKQLSTLPLGINKQAGL*RRASKP Trigger: AGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCTT...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCTCTTCTCCGAGGGCATaGCCATTGAGGTCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: TQYQRTNMTQETRPSPFLSSPRA*PLRSSF Trigger: GAAGCTGGACCTCAATGGCAATGCCCTCGGAGAAGA...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCAAGCACCTTGGCCATATaGAAGCTGTCCATCACCTCC | + |
Preference number: 5 (lower is better) Translates to: KISNGDAGRAQSIQDPQSSTLAI*KLSITS Trigger: GGAGGTGATGGACAGCTTCAATATGGCCAAGGTGCT...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AGCATCTCTTACCCGGCTCCATCCCTATTACACACTCCTGTCTTAGAAAACCCTAGGGATGCCAGCACCTaGGCCATATTGAAGCTGTCC | + |
Preference number: 5 (lower is better) Translates to: SISYPAPSLLHTPVLENPRDAST*AILKLS Trigger: GGACAGCTTCAATATGGCCAAGGTGCTGGCATCCCT...AGGGTTTTCTAAGACAGGAGTGTGTAATAGGGATGGAGCCGGGTAAGAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 |
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CDS-3UTR CAA 90 bp | AGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACGTTTCCAGCGCGCCATaGGGCTTTGTCACAAATGCC | + |
Preference number: 5 (lower is better) Translates to: REMKICNPDRKYIPTHTHVSSAP*GFVTNA Trigger: GGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAAC...GTGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 90 bp | CTGGGTATGGCCTTGATCTTGTCTTCACTCTTGAGCAGACCCATGTaGATGAGCAGCCTGGTAAGGAAGGTGTTGGAATTGAAAGAGGAG | + |
Preference number: 5 (lower is better) Translates to: LGMALILSSLLSRPM*MSSLVRKVLELKEE Trigger: CTCCTCTTTCAATTCCAACACCTTCCTTACCAGGCTGCTCATCCACATGGGTCTGCTCAAGAGTGAAGACAAGATCAAGGCCATACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATACTCGCAACAGGGGGTaGATGGCAAAGGCCTGGGCC | + |
Preference number: 5 (lower is better) Translates to: KYIPTHTHQTNTVSKDQYTRNRG*MAKAWA Trigger: GGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAGT...ATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATTCTTCTCCAGCTCAGCCTaGTCGGCCACAGCCTCAGCA | + |
Preference number: 5 (lower is better) Translates to: WPKFNNKAAFYPSPRHQFFSSSA*SATASA Trigger: TGCTGAGGCTGTGGCCGACAAGGCTGAGCTGGAGAA...GAATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCATCTTCTCCGAGGGCATaGCCATTGAGGTCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: QEVHTHTHTPNQHSIKGPSSPRA*PLRSSF Trigger: GAAGCTGGACCTCAATGGCAATGCCCTCGGAGAAGA...TGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCAGGGATGCCAGCACCTaGGCCATATTGAAGCTGTCC | + |
Preference number: 5 (lower is better) Translates to: QTNTVSKDQYDTGDKTLSRDAST*AILKLS Trigger: GGACAGCTTCAATATGGCCAAGGTGCTGGCATCCCT...GGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CTCTGTTATTTAGGCACGGTGGACACAGCACACAGAATTCCCCAGGCTTTGGTGGGTATGGCCTTGATCTaGTCTTCACTCTTGAGCAGA | + |
Preference number: 5 (lower is better) Translates to: LCYLGTVDTAHRIPQALVGMALI*SSLLSR Trigger: TCTGCTCAAGAGTGAAGACAAGATCAAGGCCATACC...CACCAAAGCCTGGGGAATTCTGTGTGCTGTGTCCACCGTGCCTAAATAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AGGAGACAAGACCCTCTCCCTTCCTCTGGTCAAAATATCCAATGGAGATGCTGGAGGCTGGGTATGGCCTaGATCTTGTCTTCACTCTTG | + |
Preference number: 5 (lower is better) Translates to: RRQDPLPSSGQNIQWRCWRLGMA*ILSSLL Trigger: CAAGAGTGAAGACAAGATCAAGGCCATACCCAGCCT...CCAGCATCTCCATTGGATATTTTGACCAGAGGAAGGGAGAGGGTCTTGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCAATGCCCATGCCACAGTaGTTAAGCTTGAGTTCCTGT | + |
Preference number: 5 (lower is better) Translates to: KISNGDAGRAQSIQDPQSMPMPQ*LSLSSC Trigger: ACAGGAACTCAAGCTTAACAACTGTGGCATGGGCAT...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCGTGTTGTCATTTAGGTaGATGACTCGCAACAGGGGG | + |
Preference number: 5 (lower is better) Translates to: PTQYQRTNMTQETRPSPFVLSFR*MTRNRG Trigger: CCCCCTGTTGCGAGTCATCAACCTAAATGACAACAC...GAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCAGGGCAGCATCTCTCTaGATTTCGCAGAACGACAGA | + |
Preference number: 5 (lower is better) Translates to: PTQYQRTNMTQETRPSPFRAASL*ISQNDR Trigger: TCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCT...GAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAGACAGGAAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGAGCACCTTGGCCATATaGAAGCTGTCCATCACCTCC | + |
Preference number: 5 (lower is better) Translates to: QTGSTYPHTHTKPTQYQRSTLAI*KLSITS Trigger: GGAGGTGATGGACAGCTTCAATATGGCCAAGGTGCT...CCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTTCCTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCAGCACCTTGGCCATATaGAAGCTGTCCATCACCTCC | + |
Preference number: 5 (lower is better) Translates to: QTNTVSKDQYDTGDKTLSSTLAI*KLSITS Trigger: GGAGGTGATGGACAGCTTCAATATGGCCAAGGTGCT...GGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAAATATCCAATGGAGATGCTGGCCGAGCTCAGTCCATCCAAGACCCTCAGTCATTTAGTTTGAGACCCTaGCCCTTAAAACTCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: KISNGDAGRAQSIQDPQSFSLRP*PLKLSC Trigger: GCAGCTGAGTTTTAAGGGCAAGGGTCTCAAACTAAA...TGACTGAGGGTCTTGGATGGACTGAGCTCGGCCAGCATCTCCATTGGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCATGCCCATGCCACAGTaGTTAAGCTTGAGTTCCTGT | + |
Preference number: 5 (lower is better) Translates to: TQYQRTNMTQETRPSPFLMPMPQ*LSLSSC Trigger: ACAGGAACTCAAGCTTAACAACTGTGGCATGGGCAT...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | CAGGGAGATGAAGATCTGCAATCCAGACAGGAAGTACATACCCACACACACACACTGGTAAGGAAGGTGTaGGAATTGAAAGAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: QGDEDLQSRQEVHTHTHTLVRKV*ELKEEQ Trigger: CTGCTCCTCTTTCAATTCCAACACCTTCCTTACCAG...TGTGTGTGTGTGGGTATGTACTTCCTGTCTGGATTGCAGATCTTCATCTCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCTTTAGTTTGAGACCCTaGCCCTTAAAACTCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: TQYQRTNMTQETRPSPFLFSLRP*PLKLSC Trigger: GCAGCTGAGTTTTAAGGGCAAGGGTCTCAAACTAAA...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAACCAACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCGGTATGGCCTTGATCTaGTCTTCACTCTTGAGCAGA | + |
Preference number: 5 (lower is better) Translates to: KPTQYQRTNMTQETRPSPGMALI*SSLLSR Trigger: TCTGCTCAAGAGTGAAGACAAGATCAAGGCCATACC...GGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGTTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATAGGCTGGGTATGGCCTaGATCTTGTCTTCACTCTTG | + |
Preference number: 5 (lower is better) Translates to: VGLSLITKQLSTLPLGINRLGMA*ILSSLL Trigger: CAAGAGTGAAGACAAGATCAAGGCCATACCCAGCCT...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | ACACAGTATCAAAGGACCAATATGACACAGGAGACAAGACCCTCTCCCTTCCTCTTCTCAGTGAAGGTGTaGTCATTTAGGTTGATGACT | + |
Preference number: 5 (lower is better) Translates to: TQYQRTNMTQETRPSPFLFSVKV*SFRLMT Trigger: AGTCATCAACCTAAATGACAACACCTTCACTGAGAA...GAGGAAGGGAGAGGGTCTTGTCTCCTGTGTCATATTGGTCCTTTGATACTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATAGGGCAGCATCTCTCTaGATTTCGCAGAACGACAGA | + |
Preference number: 5 (lower is better) Translates to: KYIPTHTHQTNTVSKDQYRAASL*ISQNDR Trigger: TCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCT...ATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | GTTGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATCTGGTAAGGAAGGTGTaGGAATTGAAAGAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: VGLSLITKQLSTLPLGINLVRKV*ELKEEQ Trigger: CTGCTCCTCTTTCAATTCCAACACCTTCCTTACCAG...ATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | AAGTACATACCCACACACACACACCAAACCAACACAGTATCAAAGGACCAATATGGTATGGCCTTGATCTaGTCTTCACTCTTGAGCAGA | + |
Preference number: 5 (lower is better) Translates to: KYIPTHTHQTNTVSKDQYGMALI*SSLLSR Trigger: TCTGCTCAAGAGTGAAGACAAGATCAAGGCCATACC...ATATTGGTCCTTTGATACTGTGTTGGTTTGGTGTGTGTGTGTGGGTATGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS-3UTR CAA 90 bp | TGGCCTAAGTTTAATAACAAAGCAGCTTTCTACCCTTCCCCTAGGCATCAATTCTTCTCAGTGAAGGTGTaGTCATTTAGGTTGATGACT | + |
Preference number: 5 (lower is better) Translates to: WPKFNNKAAFYPSPRHQFFSVKV*SFRLMT Trigger: AGTCATCAACCTAAATGACAACACCTTCACTGAGAA...GAATTGATGCCTAGGGGAAGGGTAGAAAGCTGCTTTGTTATTAAACTTAGGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | GCGATTTCTGCCAGCCACAAACACCTTCAGGGCCAGGGGCTTGCCTaGGGCACTGGACTTGCGGTGACACTCAGTCAGAGCTGCTGCCAG | + |
Preference number: 6 (lower is better) Translates to: AISASHKHLQGQGLA*GTGLAVTLSQSCCQ Trigger: CTGGCAGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGAAGGTGTTTGTGGCTGGCAGAAATCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS TCA 72 bp | AGGGCCAGGGGCTTGCCTTGGGCACTGGACTTGCGGTaGCACTCAGTCAGAGCTGCTGCCAGAATCTTGCCA | + |
Preference number: 6 (lower is better) Translates to: RARGLPWALDLR*HSVRAAARILP Trigger: TGGCAAGATTCTGGCAGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS GCA 72 bp | GGCACTGGACTTGCGGTGACACTCAGTCAGAGCTGCTaGCAGAATCTTGCCACCCCCGATGCCCATGCCACA | + |
Preference number: 6 (lower is better) Translates to: GTGLAVTLSQSC*QNLATPDAHAT Trigger: TGTGGCATGGGCATCGGGGGTGGCAAGATTCTGGCAGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS GCA 72 bp | TTGGGCACTGGACTTGCGGTGACACTCAGTCAGAGCTaGTGCCAGAATCTTGCCACCCCCGATGCCCATGCC | + |
Preference number: 6 (lower is better) Translates to: LGTGLAVTLSQS*CQNLATPDAHA Trigger: GGCATGGGCATCGGGGGTGGCAAGATTCTGGCAGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS GCA 72 bp | CCTTCAGGGCCAGGGGCTTGCCTTGGGCACTGGACTTaGGGTGACACTCAGTCAGAGCTGCTGCCAGAATCT | + |
Preference number: 6 (lower is better) Translates to: PSGPGACLGHWT*GDTQSELLPES Trigger: AGATTCTGGCAGCAGCTCTGACTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 72 bp | TTGGCGATGACTCTGGCCGCTTCCACGCCCACCGTGTaGCCCTCCAATCGTAGAGCTTCGAGGCCGTCAAAC | + |
Preference number: 6 (lower is better) Translates to: LAMTLAASTPTV*PSNRRASRPSN Trigger: GTTTGACGGCCTCGAAGCTCTACGATTGGAGGGCAACACGGTGGGCGTGGAAGCGGCCAGAGTCATCGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CAA 72 bp | GAGGTATCAGTCTGCTGGACTATCAGCACCGAGACCTaGGGACCCAGACGCAGCAGCTTCTCTGGGGAGGGG | + |
Preference number: 6 (lower is better) Translates to: EVSVCWTISTET*GPRRSSFSGEG Trigger: CCCCTCCCCAGAGAAGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | TCACTCCAGTGGCATCGCTTCAGCTCAGACTTCTTCTCTAAGGCCTaGGCGATGACTCTGGCCGCTTCCACGCCCACCGTGTTGCCCTCC | + |
Preference number: 6 (lower is better) Translates to: SLQWHRFSSDFFSKA*AMTLAASTPTVLPS Trigger: GGAGGGCAACACGGTGGGCGTGGAAGCGGCCAGAGTCATCGCCAAGGCCTTAGAGAAGAAGTCTGAGCTGAAGCGATGCCACTGGAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CAA 90 bp | TCTGGGTCGGAGGTATCAGTCTGCTGGACTATCAGCACCGAGACCTaGGGACCCAGACGCAGCAGCTTCTCTGGGGAGGGGAATGACAGG | + |
Preference number: 6 (lower is better) Translates to: SGSEVSVCWTISTET*GPRRSSFSGEGNDR Trigger: CCTGTCATTCCCCTCCCCAGAGAAGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGACCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 72 bp | TTCTGCCAGCCACAAACACCTTCAGGGCCAGGGGCTTaGCTTGGGCACTGGACTTGCGGTGACACTCAGTCA | + |
Preference number: 6 (lower is better) Translates to: FCQPQTPSGPGA*LGHWTCGDTQS Trigger: TGACTGAGTGTCACCGCAAGTCCAGTGCCCAAGGCAAGCCCCTGGCCCTGAAGGTGTTTGTGGCTGGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CCA 72 bp | AGGTATCAGTCTGCTGGACTATCAGCACCGAGACCTTaGGACCCAGACGCAGCAGCTTCTCTGGGGAGGGGA | + |
Preference number: 6 (lower is better) Translates to: RYQSAGLSAPRP*DPDAAASLGRG Trigger: TCCCCTCCCCAGAGAAGCTGCTGCGTCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 72 bp | TGGCATCGCTTCAGCTCAGACTTCTTCTCTAAGGCCTaGGCGATGACTCTGGCCGCTTCCACGCCCACCGTG | + |
Preference number: 6 (lower is better) Translates to: WHRFSSDFFSKA*AMTLAASTPTV Trigger: CACGGTGGGCGTGGAAGCGGCCAGAGTCATCGCCAAGGCCTTAGAGAAGAAGTCTGAGCTGAAGCGATGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CAA 72 bp | GCCTCGAAGCCTCGCACTCCATCGGGTCCAAATGCGTaGTCACTGAGGTCCAGTTCCACCAGCTGTGCTCCT | + |
Preference number: 6 (lower is better) Translates to: ASKPRTPSGPNA*SLRSSSTSCAP Trigger: AGGAGCACAGCTGGTGGAACTGGACCTCAGTGACAACGCATTTGGACCCGATGGAGTGCGAGGCTTCGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CAA 72 bp | GGGCAAAGGAGCAGGTTTCCAGCGCGCCATTGGGCTTaGTCACAAATGCCAAGAGCAGGGGTGCAAGGGCCT | + |
Preference number: 6 (lower is better) Translates to: GQRSRFPARHWA*SQMPRAGVQGP Trigger: AGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | TTGAGGAGGGCCTCGAAGCCTCGCACTCCATCGGGTCCAAATGCGTaGTCACTGAGGTCCAGTTCCACCAGCTGTGCTCCTGCAGTGATG | + |
Preference number: 6 (lower is better) Translates to: LRRASKPRTPSGPNA*SLRSSSTSCAPAVM Trigger: CATCACTGCAGGAGCACAGCTGGTGGAACTGGACCTCAGTGACAACGCATTTGGACCCGATGGAGTGCGAGGCTTCGAGGCCCTCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CAA 90 bp | GCCAGAATCTTGCCACCCCCGATGCCCATGCCACAGTTGTTAAGCTaGAGTTCCTGTAGGGTGAAGCAGGCTGGGCTCTTGAGGAGGGCC | + |
Preference number: 6 (lower is better) Translates to: ARILPPPMPMPQLLS*SSCRVKQAGLLRRA Trigger: GGCCCTCCTCAAGAGCCCAGCCTGCTTCACCCTACAGGAACTCAAGCTTAACAACTGTGGCATGGGCATCGGGGGTGGCAAGATTCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 90 bp | TGCAGCAGATTGTGGCGGGCAAAGGAGCAGGTTTCCAGCGCGCCATaGGGCTTTGTCACAAATGCCAAGAGCAGGGGTGCAAGGGCCTTG | + |
Preference number: 6 (lower is better) Translates to: CSRLWRAKEQVSSAP*GFVTNAKSRGARAL Trigger: CAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCCCGCCACAATCTGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | TCTAAGGCCTTGGCGATGACTCTGGCCGCTTCCACGCCCACCGTGTaGCCCTCCAATCGTAGAGCTTCGAGGCCGTCAAACTCTTCAATC | + |
Preference number: 6 (lower is better) Translates to: SKALAMTLAASTPTV*PSNRRASRPSNSSI Trigger: GATTGAAGAGTTTGACGGCCTCGAAGCTCTACGATTGGAGGGCAACACGGTGGGCGTGGAAGCGGCCAGAGTCATCGCCAAGGCCTTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS CAA 90 bp | CAGTTGTTAAGCTTGAGTTCCTGTAGGGTGAAGCAGGCTGGGCTCTaGAGGAGGGCCTCGAAGCCTCGCACTCCATCGGGTCCAAATGCG | + |
Preference number: 6 (lower is better) Translates to: QLLSLSSCRVKQAGL*RRASKPRTPSGPNA Trigger: CGCATTTGGACCCGATGGAGTGCGAGGCTTCGAGGCCCTCCTCAAGAGCCCAGCCTGCTTCACCCTACAGGAACTCAAGCTTAACAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 90 bp | GCCATGGCCACCCCACCCTTCTCAGTGAAGGTGTTGTCATTTAGGTaGATGACTCGCAACAGGGGGTTGATGGCAAAGGCCTGGGCCAGG | + |
Preference number: 6 (lower is better) Translates to: AMATPPFSVKVLSFR*MTRNRGLMAKAWAR Trigger: CCTGGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAGTCATCAACCTAAATGACAACACCTTCACTGAGAAGGGTGGGGTGGCCATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 90 bp | GATTGTGGCGGGCAAAGGAGCAGGTTTCCAGCGCGCCATTGGGCTTaGTCACAAATGCCAAGAGCAGGGGTGCAAGGGCCTTGGGGAAAT | + |
Preference number: 6 (lower is better) Translates to: DCGGQRSRFPARHWA*SQMPRAGVQGPWGN Trigger: ATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCCCGCCACAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 72 bp | TGTGGCGGGCAAAGGAGCAGGTTTCCAGCGCGCCATTaGGCTTTGTCACAAATGCCAAGAGCAGGGGTGCAA | + |
Preference number: 6 (lower is better) Translates to: CGGQRSRFPARH*ALSQMPRAGVQ Trigger: TTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCCCGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 72 bp | TTGTGGCGGGCAAAGGAGCAGGTTTCCAGCGCGCCATaGGGCTTTGTCACAAATGCCAAGAGCAGGGGTGCA | + |
Preference number: 6 (lower is better) Translates to: LWRAKEQVSSAP*GFVTNAKSRGA Trigger: TGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGCTCCTTTGCCCGCCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | GCATCTCTCTTGATTTCGCAGAACGACAGATTCAGCTCCTTTAGCTaGGGCAGGCCACCACGGACAGCATCTGCGATGGCAACGGCACCC | + |
Preference number: 6 (lower is better) Translates to: ASLLISQNDRFSSFS*GRPPRTASAMATAP Trigger: GGGTGCCGTTGCCATCGCAGATGCTGTCCGTGGTGGCCTGCCCAAGCTAAAGGAGCTGAATCTGTCGTTCTGCGAAATCAAGAGAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 72 bp | GAGGGCATCGATGGCATCCAGCACTGCGGTCTTTACTaGGGCGTCATCCCTGAACACAGATGCCACCTTCAG | + |
Preference number: 6 (lower is better) Translates to: EGIDGIQHCGLY*GVIPEHRCHLQ Trigger: CTGAAGGTGGCATCTGTGTTCAGGGATGACGCCTCAGTAAAGACCGCAGTGCTGGATGCCATCGATGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 72 bp | TGCCTCACCACGTGGTTCAACACCATCAGGGGGCCATaGAGGCTGGGTATGGCCTTGATCTTGTCTTCACTC | + |
Preference number: 6 (lower is better) Translates to: CLTTWFNTIRGP*RLGMALILSSL Trigger: GAGTGAAGACAAGATCAAGGCCATACCCAGCCTGCATGGCCCCCTGATGGTGTTGAACCACGTGGTGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 72 bp | GCAGGTTTCCAGCGCGCCATTGGGCTTTGTCACAAATaGCAAGAGCAGGGGTGCAAGGGCCTTGGGGAAATA | + |
Preference number: 6 (lower is better) Translates to: AGFQRAIGLCHK*QEQGCKGLGEI Trigger: TATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAAAGCCCAATGGCGCGCTGGAAACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 72 bp | TTGATGACTCGCAACAGGGGGTTGATGGCAAAGGCCTaGGCCAGGGCTGTGACACCAGGATGGTTAATTCCG | + |
Preference number: 6 (lower is better) Translates to: LMTRNRGLMAKA*ARAVTPGWLIP Trigger: CGGAATTAACCATCCTGGTGTCACAGCCCTGGCCCAGGCCTTTGCCATCAACCCCCTGTTGCGAGTCATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 72 bp | TTGCCACCCCCGATGCCCATGCCACAGTTGTTAAGCTaGAGTTCCTGTAGGGTGAAGCAGGCTGGGCTCTTG | + |
Preference number: 6 (lower is better) Translates to: LPPPMPMPQLLS*SSCRVKQAGLL Trigger: CAAGAGCCCAGCCTGCTTCACCCTACAGGAACTCAAGCTTAACAACTGTGGCATGGGCATCGGGGGTGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 90 bp | GCCTTGTCGGCCACAGCCTCAGCAACAACCAGGGCAGCATCTCTCTaGATTTCGCAGAACGACAGATTCAGCTCCTTTAGCTTGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: ALSATASATTRAASL*ISQNDRFSSFSLGR Trigger: CCTGCCCAAGCTAAAGGAGCTGAATCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCTGGTTGTTGCTGAGGCTGTGGCCGACAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 72 bp | CCCTTGCCCTTAAAACTCAGCTGCCCTCCGGCTACCTaGGTTTTAGCCAGGGTCTCTGCCAGTTTGGCAATG | + |
Preference number: 6 (lower is better) Translates to: PLPLKLSCPPAT*VLARVSASLAM Trigger: CATTGCCAAACTGGCAGAGACCCTGGCTAAAACTCAGGTAGCCGGAGGGCAGCTGAGTTTTAAGGGCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS TCA 72 bp | TCAGAGCTGGTGGGATCTCAGACCGAAGCCTTCCTGTaGACATGTCACTCCAGTGGCATCGCTTCAGCTCAG | + |
Preference number: 6 (lower is better) Translates to: SELVGSQTEAFL*TCHSSGIASAQ Trigger: CTGAGCTGAAGCGATGCCACTGGAGTGACATGTTCACAGGAAGGCTTCGGTCTGAGATCCCACCAGCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 ENSMUST00000230726.2 |
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CDS GCA 72 bp | TTCCAGAGTCCCGATGATCCCAAAAGCTTCTGCCAGTaGAGTGGCTCCGTCATTCTCCAGGCGATTTCTGCC | + |
Preference number: 6 (lower is better) Translates to: FQSPDDPKSFCQ*SGSVILQAISA Trigger: GGCAGAAATCGCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTTGGGATCATCGGGACTCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS GCA 72 bp | CACCTCTTCCAGAGTCCCGATGATCCCAAAAGCTTCTaGCAGTGCAGTGGCTCCGTCATTCTCCAGGCGATT | + |
Preference number: 6 (lower is better) Translates to: HLFQSPDDPKSF*QCSGSVILQAI Trigger: AATCGCCTGGAGAATGACGGAGCCACTGCACTGGCAGAAGCTTTTGGGATCATCGGGACTCTGGAAGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS GCA 72 bp | GCTGAAACAACCTTCTCTGGGTCGGAGGTATCAGTCTaGTGGACTATCAGCACCGAGACCTTGGGACCCAGA | + |
Preference number: 6 (lower is better) Translates to: AETTFSGSEVSV*WTISTETLGPR Trigger: TCTGGGTCCCAAGGTCTCGGTGCTGATAGTCCAGCAGACTGATACCTCCGACCCAGAGAAGGTTGTTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 72 bp | ATGGCAAAGGCCTGGGCCAGGGCTGTGACACCAGGATaGTTAATTCCGTTCTGTGGCATATGCACCTCTTCC | + |
Preference number: 6 (lower is better) Translates to: MAKAWARAVTPG*LIPFCGICTSS Trigger: GGAAGAGGTGCATATGCCACAGAACGGAATTAACCATCCTGGTGTCACAGCCCTGGCCCAGGCCTTTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 72 bp | AACACCATCAGGGGGCCATGCAGGCTGGGTATGGCCTaGATCTTGTCTTCACTCTTGAGCAGACCCATGTGG | + |
Preference number: 6 (lower is better) Translates to: NTIRGPCRLGMA*ILSSLLSRPMW Trigger: CCACATGGGTCTGCTCAAGAGTGAAGACAAGATCAAGGCCATACCCAGCCTGCATGGCCCCCTGATGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | ACCCTTAGAGCGCACCAGGCAGTCTCCAAAATTGATCACTTCCACTaGTCGCAGAGTCTTCAGAGTCTCAGCCATGGCCACCCCACCCTT | + |
Preference number: 6 (lower is better) Translates to: TLRAHQAVSKIDHFH*SQSLQSLSHGHPTL Trigger: AAGGGTGGGGTGGCCATGGCTGAGACTCTGAAGACTCTGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCCTGGTGCGCTCTAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | GCGATGGCAACGGCACCCTTAGAGCGCACCAGGCAGTCTCCAAAATaGATCACTTCCACTTGTCGCAGAGTCTTCAGAGTCTCAGCCATG | + |
Preference number: 6 (lower is better) Translates to: AMATAPLERTRQSPK*ITSTCRRVFRVSAM Trigger: CATGGCTGAGACTCTGAAGACTCTGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCCTGGTGCGCTCTAAGGGTGCCGTTGCCATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CCA 72 bp | TTGTCACAAATGCCAAGAGCAGGGGTGCAAGGGCCTTaGGGAAATAGTCCTGCCTCACCACGTGGTTCAACA | + |
Preference number: 6 (lower is better) Translates to: LSQMPRAGVQGP*GNSPASPRGST Trigger: TGTTGAACCACGTGGTGAGGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTCTTGGCATTTGTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 72 bp | TCAGCCATGGCCACCCCACCCTTCTCAGTGAAGGTGTaGTCATTTAGGTTGATGACTCGCAACAGGGGGTTG | + |
Preference number: 6 (lower is better) Translates to: SAMATPPFSVKV*SFRLMTRNRGL Trigger: CAACCCCCTGTTGCGAGTCATCAACCTAAATGACAACACCTTCACTGAGAAGGGTGGGGTGGCCATGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 72 bp | GCGCACCAGGCAGTCTCCAAAATTGATCACTTCCACTaGTCGCAGAGTCTTCAGAGTCTCAGCCATGGCCAC | + |
Preference number: 6 (lower is better) Translates to: AHQAVSKIDHFH*SQSLQSLSHGH Trigger: GTGGCCATGGCTGAGACTCTGAAGACTCTGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCCTGGTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 72 bp | CATCCAGCACTGCGGTCTTTACTGAGGCGTCATCCCTaGACACAGATGCCACCTTCAGGAAGGCTGAAACAA | + |
Preference number: 6 (lower is better) Translates to: HPALRSLLRRHP*TQMPPSGRLKQ Trigger: TTGTTTCAGCCTTCCTGAAGGTGGCATCTGTGTTCAGGGATGACGCCTCAGTAAAGACCGCAGTGCTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 72 bp | ACCCCACCCTTCTCAGTGAAGGTGTTGTCATTTAGGTaGATGACTCGCAACAGGGGGTTGATGGCAAAGGCC | + |
Preference number: 6 (lower is better) Translates to: TPPFSVKVLSFR*MTRNRGLMAKA Trigger: GGCCTTTGCCATCAACCCCCTGTTGCGAGTCATCAACCTAAATGACAACACCTTCACTGAGAAGGGTGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |
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CDS CAA 72 bp | ACGGCACCCTTAGAGCGCACCAGGCAGTCTCCAAAATaGATCACTTCCACTTGTCGCAGAGTCTTCAGAGTC | + |
Preference number: 6 (lower is better) Translates to: TAPLERTRQSPK*ITSTCRRVFRV Trigger: GACTCTGAAGACTCTGCGACAAGTGGAAGTGATCAATTTTGGAGACTGCCTGGTGCGCTCTAAGGGTGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 72 bp | GCCACAGCCTCAGCAACAACCAGGGCAGCATCTCTCTaGATTTCGCAGAACGACAGATTCAGCTCCTTTAGC | + |
Preference number: 6 (lower is better) Translates to: ATASATTRAASL*ISQNDRFSSFS Trigger: GCTAAAGGAGCTGAATCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCTGGTTGTTGCTGAGGCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | TTCAGAGTCTCAGCCATGGCCACCCCACCCTTCTCAGTGAAGGTGTaGTCATTTAGGTTGATGACTCGCAACAGGGGGTTGATGGCAAAG | + |
Preference number: 6 (lower is better) Translates to: FRVSAMATPPFSVKV*SFRLMTRNRGLMAK Trigger: CTTTGCCATCAACCCCCTGTTGCGAGTCATCAACCTAAATGACAACACCTTCACTGAGAAGGGTGGGGTGGCCATGGCTGAGACTCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS CAA 90 bp | AGCAGACCCATGTGGATGAGCAGCCTGGTAAGGAAGGTGTTGGAATaGAAAGAGGAGCAGCTGAAGGCCTTCTTCATGAGGGCATCGATG | + |
Preference number: 6 (lower is better) Translates to: SRPMWMSSLVRKVLE*KEEQLKAFFMRASM Trigger: CATCGATGCCCTCATGAAGAAGGCCTTCAGCTGCTCCTCTTTCAATTCCAACACCTTCCTTACCAGGCTGCTCATCCACATGGGTCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS TCA 72 bp | CCACAGCCTCAGCAACAACCAGGGCAGCATCTCTCTTaGTTTCGCAGAACGACAGATTCAGCTCCTTTAGCT | + |
Preference number: 6 (lower is better) Translates to: PQPQQQPGQHLS*FRRTTDSAPLA Trigger: AGCTAAAGGAGCTGAATCTGTCGTTCTGCGAAATCAAGAGAGATGCTGCCCTGGTTGTTGCTGAGGCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 |
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CDS GCA 72 bp | GTGACACCAGGATGGTTAATTCCGTTCTGTGGCATATaGACCTCTTCCAGAGTCCCGATGATCCCAAAAGCT | + |
Preference number: 6 (lower is better) Translates to: VTPGWLIPFCGI*TSSRVPMIPKA Trigger: AGCTTTTGGGATCATCGGGACTCTGGAAGAGGTGCATATGCCACAGAACGGAATTAACCATCCTGGTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052374.13 ENSMUST00000170134.9 ENSMUST00000171115.3 ENSMUST00000230302.2 |