Pregenerated sensors for RANBP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038546Ensembl transcript IDs: ENSMUST00000144326.4, ENSMUST00000220500.2, ENSMUST00000221092.2, ENSMUST00000222023.2, ENSMUST00000222239.2, ENSMUST00000222651.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTGCTGCTTTTGCCTGGTGCTAAGCTGTGGATACTCATTCCATaGCTGGGGCTCATGCTTGGACTACTAAAGGGTCGAGGACTGACG | + |
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Preference number: 1 (lower is better) Translates to: AVLLLPGAKLWILIP*LGLMLGLLKGRGLT Trigger: CGTCAGTCCTCGACCCTTTAGTAGTCCAAGCATGAGCCCCAGTCATGGAATGAGTATCCACAGCTTAGCACCAGGCAAAAGCAGCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR CCA 90 bp | TGTGAGCTCTTGAAGTGCATAGCTAATGTAGGTAGTCTTCCACTGTaGCAAATGCACAGGACCCAACTCCTGACCGAGCCATCAGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: CELLKCIANVGSLPL*QMHRTQLLTEPSGL Trigger: TAGGCCTGATGGCTCGGTCAGGAGTTGGGTCCTGTGCATTTGCCACAGTGGAAGACTACCTACATTAGCTATGCACTTCAAGAGCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| 3UTR CCA 90 bp | ACTACTAAAGGGTCGAGGACTGACGGGATAACTGTCTTGAGATTTTaGACTTCGGCCTCCCAAACACCGCACTTCACTGTCTGTACCATT | + |
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Preference number: 1 (lower is better) Translates to: TTKGSRTDGITVLRF*TSASQTPHFTVCTI Trigger: AATGGTACAGACAGTGAAGTGCGGTGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTTATCCCGTCAGTCCTCGACCCTTTAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR GCA 90 bp | TTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTaGATAGCTAATGTAGGTAGTCTTCCACTGTGGCAAATGCACAGG | + |
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Preference number: 1 (lower is better) Translates to: FHVDCLPQCECELLK*IANVGSLPLWQMHR Trigger: CCTGTGCATTTGCCACAGTGGAAGACTACCTACATTAGCTATGCACTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| 3UTR TCA 90 bp | AATTCAAACTGTCGGATGTTTATGCATTTTGCAAGTTACACTGATTaGATGCTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: NSNCRMFMHFASYTD*MLTQERGSEQLPIC Trigger: ACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAAAATGCATAAACATCCGACAGTTTGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| 3UTR CCA 90 bp | GATTTCTTTCAAGTAAACTTGGGTATAACTGTTGTGTTGTTTCAATaGCTTCTCCCATTCGTCCTGCTAACACCAACTTCTGAATTCTTT | + |
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Preference number: 1 (lower is better) Translates to: DFFQVNLGITVVLFQ*LLPFVLLTPTSEFF Trigger: AAAGAATTCAGAAGTTGGTGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAAGTTTACTTGAAAGAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR CAA 90 bp | CATGCTTGGACTACTAAAGGGTCGAGGACTGACGGGATAACTGTCTaGAGATTTTGGACTTCGGCCTCCCAAACACCGCACTTCACTGTC | + |
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Preference number: 2 (lower is better) Translates to: HAWTTKGSRTDGITV*RFWTSASQTPHFTV Trigger: GACAGTGAAGTGCGGTGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTTATCCCGTCAGTCCTCGACCCTTTAGTAGTCCAAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTTGCCTGGTGCTAAGCTGTGGATACTCATTCCATGACTGGGGCTCATGCTTTTGGATCATGGTCTaGCATTCTCCTTCTCGATCC | + |
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Preference number: 2 (lower is better) Translates to: CFCLVLSCGYSFHDWGSCFWIMV*HSPSRS Trigger: GGATCGAGAAGGAGAATGGCAGACCATGATCCAAAA...GCATGAGCCCCAGTCATGGAATGAGTATCCACAGCTTAGCACCAGGCAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR-3UTR CCA 90 bp | GGTATAACTGTTGTGTTGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACACCACAAAGGCCTCTGCTGTaGCACAGTACCCATGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GITVVLFQWLLPFVLLTPQRPLL*HSTHGG Trigger: TCCACCATGGGTACTGTGCCACAGCAGAGGCCTTTG...TGGTGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220500.2 ENSMUST00000222239.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTATAACTGTTGTGTTGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACATCTGGCAAAGGCCTCTaGTGTGGCACAGTACCCATG | + |
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Preference number: 2 (lower is better) Translates to: LGITVVLFQWLLPFVLLTSGKGL*CGTVPM Trigger: CATGGGTACTGTGCCACAGCAGAGGCCTTTGCCAGA...TGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220500.2 ENSMUST00000222239.2 |
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| 3UTR-3UTR GCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTCCATGTTGACTGTTTaGCACAATGTGAGTGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PVYFHVDCLPQCECELLKSMLTV*HNVSVS Trigger: GCTCACACTCACATTGTGGCAAACAGTCAACATGGA...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCTTGAGATTTTGGACTTCGGCCTCCCAAACACCGCACTTCACTGTCTGTCTTCTAGAACAGTCTaGTCTGTAGATCTGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: NCLEILDFGLPNTALHCLSSRTV*SVDLAK Trigger: CTTTGCCAGATCTACAGACCAGACTGTTCTAGAAGA...CAGACAGTGAAGTGCGGTGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGATACTCATTCCATGACTGGGGCTCATGCTTGGACTACTAAAGGGTCGAGGGACGTACTTTTAATGTaGAAAGGAGATTGGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: VDTHSMTGAHAWTTKGSRDVLLM*KGDWDF Trigger: GAAATCCCAATCTCCTTTTCACATTAAAAGTACGTC...CCTCGACCCTTTAGTAGTCCAAGCATGAGCCCCAGTCATGGAATGAGTATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR CAA 90 bp | GTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTaGAAGTGCATAGCTAATGTAGGTAGTCTTCCACTGTGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: VYFHVDCLPQCECEL*KCIANVGSLPLWQM Trigger: CATTTGCCACAGTGGAAGACTACCTACATTAGCTATGCACTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTTCCATGTTGACTGTTTaGCACAATGTGAGTGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSSMLTV*HNVSVS Trigger: GCTCACACTCACATTGTGGCAAACAGTCAACATGGA...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTCTCCCATTCGTCCTGCTAACACCAACTTCTGAATTCTTTGTCTATTCTGGAAAGCGGTCTATCTaGGCCTGTATTTTGGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WLLPFVLLTPTSEFFVYSGKRSI*ACILVL Trigger: GAGAACCAAAATACAGGCCCAGATAGACCGCTTTCC...AGAATAGACAAAGAATTCAGAAGTTGGTGTTAGCAGGACGAATGGGAGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220500.2 ENSMUST00000222239.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACTGTTGTGTTGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACACCAACTTTTTGGATCATGGTCTaGCATTCTCCTTCTCGATCC | + |
|
Preference number: 2 (lower is better) Translates to: ITVVLFQWLLPFVLLTPTFWIMV*HSPSRS Trigger: GGATCGAGAAGGAGAATGGCAGACCATGATCCAAAA...AGTTGGTGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220500.2 ENSMUST00000222239.2 |
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| 3UTR CAA 90 bp | CTAAATTTCAAATCAGCAGAGCCGGTCTACTTCCATGTTGACTGTTaGCCACAATGTGAGTGTGAGCTCTTGAAGTGCATAGCTAATGTA | + |
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Preference number: 2 (lower is better) Translates to: LNFKSAEPVYFHVDC*PQCECELLKCIANV Trigger: TACATTAGCTATGCACTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGGCTCTGCTGATTTGAAATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| 3UTR CAA 90 bp | GGAGATTGGGATTTCTTTCAAGTAAACTTGGGTATAACTGTTGTGTaGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACACCAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: GDWDFFQVNLGITVV*FQWLLPFVLLTPTS Trigger: AGAAGTTGGTGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAAGTTTACTTGAAAGAAATCCCAATCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACATTTTGCAAGTTACACTaGTTGAATGCTTACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: TVKLVSLQQKSSVVKQETFCKLH*LNAYTG Trigger: TCCTGTGTAAGCATTCAATCAGTGTAACTTGCAAAA...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| 3UTR CCA 72 bp | GGGTCGAGGACTGACGGGATAACTGTCTTGAGATTTTaGACTTCGGCCTCCCAAACACCGCACTTCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSRTDGITVLRF*TSASQTPHFTV Trigger: GACAGTGAAGTGCGGTGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTTATCCCGTCAGTCCTCGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR CCA 72 bp | GCTGTGGATACTCATTCCATGACTGGGGCTCATGCTTaGACTACTAAAGGGTCGAGGACTGACGGGATAACT | + |
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Preference number: 3 (lower is better) Translates to: AVDTHSMTGAHA*TTKGSRTDGIT Trigger: AGTTATCCCGTCAGTCCTCGACCCTTTAGTAGTCCAAGCATGAGCCCCAGTCATGGAATGAGTATCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR TCA 72 bp | CTTTTGCCTGGTGCTAAGCTGTGGATACTCATTCCATaGCTGGGGCTCATGCTTGGACTACTAAAGGGTCGA | + |
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Preference number: 3 (lower is better) Translates to: LLPGAKLWILIP*LGLMLGLLKGR Trigger: TCGACCCTTTAGTAGTCCAAGCATGAGCCCCAGTCATGGAATGAGTATCCACAGCTTAGCACCAGGCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
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| 3UTR CCA 72 bp | TTGAAGTGCATAGCTAATGTAGGTAGTCTTCCACTGTaGCAAATGCACAGGACCCAACTCCTGACCGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LKCIANVGSLPL*QMHRTQLLTEP Trigger: TGGCTCGGTCAGGAGTTGGGTCCTGTGCATTTGCCACAGTGGAAGACTACCTACATTAGCTATGCACTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| 3UTR-3UTR CAA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTTCCATGTTGACTGTTaGCCACAATGTGAGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PVYFHVDCLPQCECELLKFHVDC*PQCECE Trigger: CTCACACTCACATTGTGGCAAACAGTCAACATGGAA...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR TCA 72 bp | TGTCGGATGTTTATGCATTTTGCAAGTTACACTGATTaGATGCTTACACAGGAGCGGGGGTCGGAACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: CRMFMHFASYTD*MLTQERGSEQL Trigger: GAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAAAATGCATAAACATCCGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| 3UTR-3UTR CAA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTCGGTCTACTTCCATGTaGACTGTTTGCCACAATGTG | + |
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Preference number: 3 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSRSTSM*TVCHNV Trigger: CACATTGTGGCAAACAGTCAACATGGAAGTAGACCG...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR-3UTR CAA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTTTCCATGTTGACTGTTaGCCACAATGTGAGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSFHVDC*PQCECE Trigger: CTCACACTCACATTGTGGCAAACAGTCAACATGGAA...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR TCA 72 bp | AAACTGTCGGATGTTTATGCATTTTGCAAGTTACACTaGTTGAATGCTTACACAGGAGCGGGGGTCGGAACA | + |
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Preference number: 3 (lower is better) Translates to: KLSDVYAFCKLH*LNAYTGAGVGT Trigger: TGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAAAATGCATAAACATCCGACAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| 3UTR-3UTR CAA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCGGTCTACTTCCATGTaGACTGTTTGCCACAATGTG | + |
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Preference number: 3 (lower is better) Translates to: SFASCCKLGSNVKRQKPVRSTSM*TVCHNV Trigger: CACATTGTGGCAAACAGTCAACATGGAAGTAGACCG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACATGTGAGTGTGAGCTCTaGAAGTGCATAGCTAATGTA | + |
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Preference number: 3 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTCECEL*KCIANV Trigger: TACATTAGCTATGCACTTCAAGAGCTCACACTCACA...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| 3UTR CCA 72 bp | CAAGTAAACTTGGGTATAACTGTTGTGTTGTTTCAATaGCTTCTCCCATTCGTCCTGCTAACACCAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: QVNLGITVVLFQ*LLPFVLLTPTS Trigger: AGAAGTTGGTGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAAGTTTACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220500.2 ENSMUST00000222239.2 |
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| 3UTR-3UTR CAA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTCGGTCTACTTCCATGTaGACTGTTTGCCACAATGTG | + |
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Preference number: 3 (lower is better) Translates to: KSFASCCKLGSNVKRQKPRSTSM*TVCHNV Trigger: CACATTGTGGCAAACAGTCAACATGGAAGTAGACCG...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| 3UTR GCA 72 bp | CCATCAACACTATTAATTCAAACTGTCGGATGTTTATaGATTTTGCAAGTTACACTGATTGAATGCTTACAC | + |
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Preference number: 3 (lower is better) Translates to: PSTLLIQTVGCL*ILQVTLIECLH Trigger: GTGTAAGCATTCAATCAGTGTAACTTGCAAAATGCATAAACATCCGACAGTTTGAATTAATAGTGTTGATGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR TCA 90 bp | GCTAATTCTTCTAGAACAGTCTGGTCTGTAGATCTGGCAAAGGCCTCTGCTGTGCCTTCTCCTGCTCGTTaGGGGCCGAGTCGCCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: ANSSRTVWSVDLAKASAVPSPAR*GPSRRA Trigger: CGCACGGCGACTCGGCCCTCAACGAGCAGGAGAAGG...CACAGCAGAGGCCTTTGCCAGATCTACAGACCAGACTGTTCTAGAAGAATTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
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| CDS-3UTR GCA 90 bp | TGGCTTCTCCCATTCGTCCTGCTAACACCAACTTCTGAATTCTTTGTCTATTCTAGGGCCGAGTCGCCGTaGGGGAAAGGGGCAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: WLLPFVLLTPTSEFFVYSRAESP*GKGAAA Trigger: CGCCGCTGCCCCTTTCCCGCACGGCGACTCGGCCCT...AGAATAGACAAAGAATTCAGAAGTTGGTGTTAGCAGGACGAATGGGAGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
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| CDS-3UTR CCA 90 bp | TTGCAAGTTACACTGATTGAATGCTTACACAGGAGCGGGGGTCGGAACAGCTCCGGCCTAGACACTGTGTaGCCTGTCCCATGGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LQVTLIECLHRSGGRNSSGLDTV*PVPWLG Trigger: CCCTAGCCATGGGACAGGCCACACAGTGTCTAGGCC...GGAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR TCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTCCTTCTCCTGCTCGTTaGGGGCCGAGTCGCCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSPSPAR*GPSRRA Trigger: CGCACGGCGACTCGGCCCTCAACGAGCAGGAGAAGG...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR GCA 90 bp | CCATTCTCCTTCTCGATCCCCGATAGGAAAGCGGTCTATCTGGGCCTGTATTTTTGCAGCTCCTTCTCCTaGTCGTTGAGGGCCGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: PFSFSIPDRKAVYLGLYFCSSFS*SLRAES Trigger: CGACTCGGCCCTCAACGAGCAGGAGAAGGAGCTGCA...AAAATACAGGCCCAGATAGACCGCTTTCCTATCGGGGATCGAGAAGGAGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
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| CDS-3UTR CCA 90 bp | CTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGTAGTTTACATCACCCAAATCCCACAGGCCGCTaGTATTGGATGCGTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LTQERGSEQLPICSLHHPNPTGR*YWMRGS Trigger: CGAGCCACGCATCCAATACCAGCGGCCTGTGGGATT...TGGGTGATGTAAACTACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR TCA 90 bp | TCGATCCCCGATAGGAAAGCGGTCTATCTGGGCCTGTATTTTGGTTCTCCATTCAGAGGCCGATGTAGCTaGACTTGTCCTTCGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SIPDRKAVYLGLYFGSPFRGRCS*TCPSGS Trigger: GGAGCCCGAAGGACAAGTTCAGCTACATCGGCCTCT...GAATGGAGAACCAAAATACAGGCCCAGATAGACCGCTTTCCTATCGGGGATCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
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| CDS-3UTR GCA 90 bp | CTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGTAGTTTACATCACCCATCTGGCAAAGGCCTCTaGTGTGGCACAGTACCCATG | + |
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Preference number: 4 (lower is better) Translates to: LTQERGSEQLPICSLHHPSGKGL*CGTVPM Trigger: CATGGGTACTGTGCCACAGCAGAGGCCTTTGCCAGA...TGGGTGATGTAAACTACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR CCA 90 bp | ATCCCCGATAGGAAAGCGGTCTATCTGGGCCTGTATTTTGGTTCTCCATTCTCGAATCCCACAGGCCGCTaGTATTGGATGCGTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: IPDRKAVYLGLYFGSPFSNPTGR*YWMRGS Trigger: CGAGCCACGCATCCAATACCAGCGGCCTGTGGGATT...CGAGAATGGAGAACCAAAATACAGGCCCAGATAGACCGCTTTCCTATCGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
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| CDS-3UTR TCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGCTCTCTATGGCAGCCTaGCTTCCTCCACACAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKLSMAA*LPPHSW Trigger: CCAGCTGTGTGGAGGAAGTCAGGCTGCCATAGAGAG...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR GCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTAGGGCCGAGTCGCCGTaGGGGAAAGGGGCAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPRAESP*GKGAAA Trigger: CGCCGCTGCCCCTTTCCCGCACGGCGACTCGGCCCT...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR GCA 90 bp | GCTAATTCTTCTAGAACAGTCTGGTCTGTAGATCTGGCAAAGGCCTCTGCTGTGGCCGCTGGTATTGGATaGGTGGCTCGAACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRTVWSVDLAKASAVAAGIG*VARTDA Trigger: AGCATCTGTTCGAGCCACGCATCCAATACCAGCGGC...CACAGCAGAGGCCTTTGCCAGATCTACAGACCAGACTGTTCTAGAAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
||
| CDS-3UTR GCA 90 bp | GACCCAACTCCTGACCGAGCCATCAGGCCTAGACACTGTGTGGCCTGTCCCATGCAGCATTTTCTTATTTaGTGTGTTCTTGCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: DPTPDRAIRPRHCVACPMQHFLI*CVLATF Trigger: GAATGTGGCAAGAACACAGCAAATAAGAAAATGCTG...CATGGGACAGGCCACACAGTGTCTAGGCCTGATGGCTCGGTCAGGAGTTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAAGTTACACTGATTGAATGCTTACACAGGAGCGGGGGTCGGAACAGCTCCAGGGCAAGTGGAGGTTaGTTTGGCAGATTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQVTLIECLHRSGGRNSSRASGG*FGRLWV Trigger: AACCCACAATCTGCCAAAGCAACCTCCACTTGCCCT...GGAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGACAGGCCGCTGGTATTaGATGCGTGGCTCGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKTGRWY*MRGSNR Trigger: TCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGT...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGTAGTTTACATCACCCAGGTAGTCTTCCACTGTaGCAAATGCACAGGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTQERGSEQLPICSLHHPGSLPL*QMHRTQ Trigger: TTGGGTCCTGTGCATTTGCCACAGTGGAAGACTACC...TGGGTGATGTAAACTACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| 3UTR CAA 72 bp | ACTACTAAAGGGTCGAGGACTGACGGGATAACTGTCTaGAGATTTTGGACTTCGGCCTCCCAAACACCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTKGSRTDGITV*RFWTSASQTPH Trigger: GTGCGGTGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTTATCCCGTCAGTCCTCGACCCTTTAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCTTCTCGATCCCCGATAGGAAAGCGGTCTATCTGGGCCTGTATTTTCTGGTATTGGATGCGTaGCTCGAACAGATGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSFSIPDRKAVYLGLYFLVLDA*LEQMLH Trigger: ATGCAGCATCTGTTCGAGCCACGCATCCAATACCAG...AAAATACAGGCCCAGATAGACCGCTTTCCTATCGGGGATCGAGAAGGAGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAAGTTACACTGATTGAATGCTTACACAGGAGCGGGGGTCGGAACAGCTCCTTCATGTTCACACCTTaGGCAGAAAGACCAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVTLIECLHRSGGRNSSFMFTP*AERPIP Trigger: GGGAATTGGTCTTTCTGCTCAAGGTGTGAACATGAA...GGAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR GCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGAGGGCAAGTGGAGGTTaGTTTGGCAGATTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKRASGG*FGRLWV Trigger: AACCCACAATCTGCCAAAGCAACCTCCACTTGCCCT...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAAGTTACACTGATTGAATGCTTACACAGGAGCGGGGGTCGGAACAGCTCCACTGTCTTGAGATTTTaGACTTCGGCCTCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQVTLIECLHRSGGRNSSTVLRF*TSASQT Trigger: TGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGT...GGAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGGAATCATCCTCTCTATaGCAGCCTGACTTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKESSSL*QPDFLH Trigger: GTGGAGGAAGTCAGGCTGCCATAGAGAGGATGATTC...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGCCGCTGGTATTGGATaGGTGGCTCGAACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTAAGIG*VARTDA Trigger: AGCATCTGTTCGAGCCACGCATCCAATACCAGCGGC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACATCTGGCAAAGGCCTCTaGTGTGGCACAGTACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTSGKGL*CGTVPM Trigger: CATGGGTACTGTGCCACAGCAGAGGCCTTTGCCAGA...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | ATAACTGTTGTGTTGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACACCAACTACAGGCCGCTGGTATTaGATGCGTGGCTCGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITVVLFQWLLPFVLLTPTTGRWY*MRGSNR Trigger: TCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGT...AGTTGGTGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGTGCAGTGCTGCTTTTaGCTGGTGCTAAGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTVQCCF*LVLSCG Trigger: TCCACAGCTTAGCACCAGGCAAAAGCAGCACTGCAC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGCAGAAAAATGTGCAGTaGTGCTTTTGCCTGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKQKNVQ*CFCLVL Trigger: TAGCACCAGGCAAAAGCAGCACTGCACATTTTTCTG...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTCTGGTATTGGATGCGTaGCTCGAACAGATGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSLVLDA*LEQMLH Trigger: ATGCAGCATCTGTTCGAGCCACGCATCCAATACCAG...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCAATCCCACAGGCCGCTaGTATTGGATGCGTGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVNPTGR*YWMRGS Trigger: CGAGCCACGCATCCAATACCAGCGGCCTGTGGGATT...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGGTTGTGTTGTTTCAATaGCTTCTCCCATTCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKVVLFQ*LLPFVL Trigger: CAGGACGAATGGGAGAAGCCATTGAAACAACACAAC...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGACTGTCTTGAGATTTTaGACTTCGGCCTCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKTVLRF*TSASQT Trigger: TGTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGT...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGTAGTTTACATCACCCACAATCTTCCATTTCGTaGTCATGTTTAGAGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQERGSEQLPICSLHHPQSSIS*SCLELP Trigger: TGGTAGCTCTAAACATGACCACGAAATGGAAGATTG...TGGGTGATGTAAACTACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCGTGTGGCCTGTCCCATaGCTAGGGCAAGTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVVWPVP*LGQVEV Trigger: AACCTCCACTTGCCCTAGCCATGGGACAGGCCACAC...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR TCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTTGGCGGTAAGTCGGTaGAAGCAATACCTAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKLAVSR*KQYLNY Trigger: ATAGTTTAGGTATTGCTTTCACCGACTTACCGCCAA...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTTGCAGCTCCTTCTCCTaGTCGTTGAGGGCCGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPCSSFS*SLRAES Trigger: CGACTCGGCCCTCAACGAGCAGGAGAAGGAGCTGCA...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR GCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACACGTGGCTCGAACAGATaGTGCATCTTTGGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTRGSNR*CIFGGF Trigger: AAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACG...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCGCCGCTGGTATTGGATaGGTGGCTCGAACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVAAGIG*VARTDA Trigger: AGCATCTGTTCGAGCCACGCATCCAATACCAGCGGC...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGACCAGTTGTAAAAGTTaGTCCATACGGTTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKTSCKS*SIRLSS Trigger: ACTGGACAACCGTATGGACCAACTTTTACAACTGGT...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTGATGTTGCCCAAAGTTaGCATCAACCACTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSDVAQS*HQPLLL Trigger: CAGGAGAAGTGGTTGATGCCAACTTTGGGCAACATC...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCAAAGGCCTCTGCTGTaGCACAGTACCCATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVQRPLL*HSTHGG Trigger: TCCACCATGGGTACTGTGCCACAGCAGAGGCCTTTG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGGCCTAGACACTGTGTaGCCTGTCCCATGGCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPGLDTV*PVPWLG Trigger: CCCTAGCCATGGGACAGGCCACACAGTGTCTAGGCC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGCATAGCTAATGTAGGTAGTCTTCCACTGTGGCAAATGCACAGGACCCAAAAGTGGAGGTTGCTTTaGCAGATTGTGGGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCIANVGSLPLWQMHRTQKWRLL*QIVGFF Trigger: GAAGAAACCCACAATCTGCCAAAGCAACCTCCACTT...TTGGGTCCTGTGCATTTGCCACAGTGGAAGACTACCTACATTAGCTATGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
||
| CDS-3UTR TCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTAGAGGCCGATGTAGCTaGACTTGTCCTTCGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPRGRCS*TCPSGS Trigger: GGAGCCCGAAGGACAAGTTCAGCTACATCGGCCTCT...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR TCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTCTCTCTATGGCAGCCTaGCTTCCTCCACACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPLSMAA*LPPHSW Trigger: CCAGCTGTGTGGAGGAAGTCAGGCTGCCATAGAGAG...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGGAAAGCGGTCTATCTaGGCCTGTATTTTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTGKRSI*ACILVL Trigger: GAGAACCAAAATACAGGCCCAGATAGACCGCTTTCC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGGTCAAGCTGGATAGCTaGTGTTTACTATGGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKVKLDS*CLLWQY Trigger: ATATTGCCATAGTAAACACCAGCTATCCAGCTTGAC...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTCCGGTACAGTCAAGCTaGATAGCTGGTGTTTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSPVQSS*IAGVYY Trigger: ATAGTAAACACCAGCTATCCAGCTTGACTGTACCGG...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTGCTTTGGCAGATTGTaGGTTTCTAATATTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVYFHVDCLPQCECELLKCFGRL*VSNIAL Trigger: CAGTGCAATATTAGAAACCCACAATCTGCCAAAGCA...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTGTGGCCTGTCCCATaGCTAGGGCAAGTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPVWPVP*LGQVEV Trigger: AACCTCCACTTGCCCTAGCCATGGGACAGGCCACAC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| 3UTR CAA 72 bp | CATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTaGAAGTGCATAGCTAATGTAGGTAGTCTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HVDCLPQCECEL*KCIANVGSLPL Trigger: CAGTGGAAGACTACCTACATTAGCTATGCACTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACACAGAAAAATGTGCAGTaGTGCTTTTGCCTGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTQKNVQ*CFCLVL Trigger: TAGCACCAGGCAAAAGCAGCACTGCACATTTTTCTG...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCTGGTATTGGATGCGTaGCTCGAACAGATGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVLVLDA*LEQMLH Trigger: ATGCAGCATCTGTTCGAGCCACGCATCCAATACCAG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGGTATAACTGTTGTGTTGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACACCAGTTGTAAAAGTTaGTCCATACGGTTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGYNCCVVSMASPIRPANTSCKS*SIRLSS Trigger: ACTGGACAACCGTATGGACCAACTTTTACAACTGGT...GTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACACAAAGGCCTCTGCTGTaGCACAGTACCCATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVKLVSLQQKSSVVKQETQRPLL*HSTHGG Trigger: TCCACCATGGGTACTGTGCCACAGCAGAGGCCTTTG...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTTCTTCTAGAACAGTCTaGTCTGTAGATCTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSSSRTV*SVDLAK Trigger: CTTTGCCAGATCTACAGACCAGACTGTTCTAGAAGA...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTGCAGTGCTGCTTTTaGCTGGTGCTAAGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPVQCCF*LVLSCG Trigger: TCCACAGCTTAGCACCAGGCAAAAGCAGCACTGCAC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCGGCGTCTTAACTGACTaGAGTCAACTTCCATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVGVLTD*SQLPFR Trigger: CCGAAATGGAAGTTGACTGCAGTCAGTTAAGACGCC...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCGATGTTGCCCAAAGTTaGCATCAACCACTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVDVAQS*HQPLLL Trigger: CAGGAGAAGTGGTTGATGCCAACTTTGGGCAACATC...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTTTTCTCCAACTCCATTaGAGTAGTGATCTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSFLQLH*SSDLFP Trigger: TGGAAACAGATCACTACTCCAATGGAGTTGGAGAAA...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAAAGCTGATTTCCAACTaGACTATTCCAAGGATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTKLISN*TIPRIR Trigger: TCGGATCCTTGGAATAGTCCAGTTGGAAATCAGCTT...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACATGCACTGTTAAGAGCTaGGCACACAGGTTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVKLVSLQQKSSVVKQETCTVKS*AHRFSL Trigger: CAGAGAGAACCTGTGTGCTCAGCTCTTAACAGTGCA...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR TCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTTGCACTGTTAAGAGCTaGGCACACAGGTTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPCTVKS*AHRFSL Trigger: CAGAGAGAACCTGTGTGCTCAGCTCTTAACAGTGCA...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCTTTTGGATCATGGTCTaGCATTCTCCTTCTCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVFWIMV*HSPSRS Trigger: GGATCGAGAAGGAGAATGGCAGACCATGATCCAAAA...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTCAGCATTTTCTTATTTaGTGTGTTCTTGCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSQHFLI*CVLATF Trigger: GAATGTGGCAAGAACACAGCAAATAAGAAAATGCTG...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTAGGGCAAGTGGAGGTTaGTTTGGCAGATTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPRASGG*FGRLWV Trigger: AACCCACAATCTGCCAAAGCAACCTCCACTTGCCCT...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCGGTACAGTCAAGCTaGATAGCTGGTGTTTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVPVQSS*IAGVYY Trigger: ATAGTAAACACCAGCTATCCAGCTTGACTGTACCGG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGAATCATCCTCTCTATaGCAGCCTGACTTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPESSSL*QPDFLH Trigger: GTGGAGGAAGTCAGGCTGCCATAGAGAGGATGATTC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGGTAGTCTTCCACTGTaGCAAATGCACAGGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPGSLPL*QMHRTQ Trigger: TTGGGTCCTGTGCATTTGCCACAGTGGAAGACTACC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR TCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCTTGGCGGTAAGTCGGTaGAAGCAATACCTAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVLAVSR*KQYLNY Trigger: ATAGTTTAGGTATTGCTTTCACCGACTTACCGCCAA...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR TCA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGACGTACTTTTAATGTaGAAAGGAGATTGGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTDVLLM*KGDWDF Trigger: GAAATCCCAATCTCCTTTTCACATTAAAAGTACGTC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGGCGTCTTAACTGACTaGAGTCAACTTCCATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPGVLTD*SQLPFR Trigger: CCGAAATGGAAGTTGACTGCAGTCAGTTAAGACGCC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGGAAAGCGGTCTATCTaGGCCTGTATTTTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPGKRSI*ACILVL Trigger: GAGAACCAAAATACAGGCCCAGATAGACCGCTTTCC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCTCTTCTAGAACAGTCTaGTCTGTAGATCTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVSSRTV*SVDLAK Trigger: CTTTGCCAGATCTACAGACCAGACTGTTCTAGAAGA...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCAAGCTGATTTCCAACTaGACTATTCCAAGGATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVKLISN*TIPRIR Trigger: TCGGATCCTTGGAATAGTCCAGTTGGAAATCAGCTT...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACAAAAAATGTGCAGTGCTaGTTTTGCCTGGTGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVKLVSLQQKSSVVKQETKNVQC*FCLVLS Trigger: GCTTAGCACCAGGCAAAAGCAGCACTGCACATTTTT...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR GCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTAAAAATGTGCAGTGCTaGTTTTGCCTGGTGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPKNVQC*FCLVLS Trigger: GCTTAGCACCAGGCAAAAGCAGCACTGCACATTTTT...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACAGTTGTGTTGTTTCAATaGCTTCTCCCATTCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVKLVSLQQKSSVVKQETVVLFQ*LLPFVL Trigger: CAGGACGAATGGGAGAAGCCATTGAAACAACACAAC...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCTTTCTCCAACTCCATTaGAGTAGTGATCTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVFLQLH*SSDLFP Trigger: TGGAAACAGATCACTACTCCAATGGAGTTGGAGAAA...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCAATCTTCCATTTCGTaGTCATGTTTAGAGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVQSSIS*SCLELP Trigger: TGGTAGCTCTAAACATGACCACGAAATGGAAGATTG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCTGCTTTGGCAGATTGTaGGTTTCTTCAGCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFASCCKLGSNVKRQKPVCFGRL*VSSAFS Trigger: AGAAAATGCTGAAGAAACCCACAATCTGCCAAAGCA...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
||
| 3UTR CAA 72 bp | GATTTCTTTCAAGTAAACTTGGGTATAACTGTTGTGTaGTTTCAATGGCTTCTCCCATTCGTCCTGCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DFFQVNLGITVV*FQWLLPFVLLT Trigger: TGTTAGCAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAAGTTTACTTGAAAGAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222239.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACAGTCAAGCTGGATAGCTaGTGTTTACTATGGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TVKLVSLQQKSSVVKQETVKLDS*CLLWQY Trigger: ATATTGCCATAGTAAACACCAGCTATCCAGCTTGAC...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR TCA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGACGTACTTTTAATGTaGAAAGGAGATTGGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFASCCKLGSNVKRQKPDVLLM*KGDWDF Trigger: GAAATCCCAATCTCCTTTTCACATTAAAAGTACGTC...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACACAGCATTTTCTTATTTaGTGTGTTCTTGCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TVKLVSLQQKSSVVKQETQHFLI*CVLATF Trigger: GAATGTGGCAAGAACACAGCAAATAAGAAAATGCTG...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS GCA 90 bp | CGCCTCTGCAGCTCCTTCTCCTGCTCGTTGAGGGCCGAGTCGCCGTaGGGGAAAGGGGCAGCGGCGCTGCTGCCCGCCGCCAGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCSSFSCSLRAESP*GKGAAALLPAARPG Trigger: CCCGGGCCTGGCGGCGGGCAGCAGCGCCGCTGCCCCTTTCCCGCACGGCGACTCGGCCCTCAACGAGCAGGAGAAGGAGCTGCAGAGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
||
| CDS GCA 90 bp | AATCCCACAGGCCGCTGGTATTGGATGCGTGGCTCGAACAGATGCTaGATCTTTGGGGGTTTTACCATGACCGAGTACCCAGCTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NPTGRWYWMRGSNRC*IFGGFTMTEYPAGL Trigger: GAGTCCAGCTGGGTACTCGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222651.2 |
||
| CDS GCA 90 bp | AATCCCACAGGCCGCTGGTATTGGATGCGTGGCTCGAACAGATGCTaGATCTTTGGGGGTTTTACCATGACCTTTGTAGTGCACCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NPTGRWYWMRGSNRC*IFGGFTMTFVVHPQ Trigger: CTGCGGGTGCACTACAAAGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
||
| CDS-3UTR CAA 90 bp | TCTCGATCCCCGATAGGAAAGCGGTCTATCTGGGCCTGTATTTTGGTTCTCCATCACAGGCCGCTGGTATaGGATGCGTGGCTCGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSPIGKRSIWACILVLHHRPLV*DAWLEQ Trigger: CTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTG...ATGGAGAACCAAAATACAGGCCCAGATAGACCGCTTTCCTATCGGGGATCGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
||
| CDS GCA 90 bp | ATAAATCCCACAGGCCGCTGGTATTGGATGCGTGGCTCGAACAGATaGTGCATCTTTGGGGGTTTTACCATGACCGAGTACCCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: INPTGRWYWMRGSNR*CIFGGFTMTEYPAG Trigger: TCCAGCTGGGTACTCGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222651.2 |
||
| CDS CCA 90 bp | CACTCATGGCTTGTAGCTCTCGGCCAAAGTGAATCATCCTCTCTATaGCAGCCTGACTTCCTCCACACAGCTGGCGTCTTAACTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSWLVALGQSESSSL*QPDFLHTAGVLTDC Trigger: GCAGTCAGTTAAGACGCCAGCTGTGTGGAGGAAGTCAGGCTGCCATAGAGAGGATGATTCACTTTGGCCGAGAGCTACAAGCCATGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CAA 90 bp | CTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGTAGTTTACATCACCCATGTGCAGTGCTGCTTTaGCCTGGTGCTAAGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTQERGSEQLPICSLHHPCAVLL*PGAKLW Trigger: CCACAGCTTAGCACCAGGCAAAAGCAGCACTGCACA...TGGGTGATGTAAACTACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS GCA 90 bp | ATAAATCCCACAGGCCGCTGGTATTGGATGCGTGGCTCGAACAGATaGTGCATCTTTGGGGGTTTTACCATGACCTTTGTAGTGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: INPTGRWYWMRGSNR*CIFGGFTMTFVVHP Trigger: CGGGTGCACTACAAAGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
||
| CDS-3UTR CAA 90 bp | GTAAACTTGGGTATAACTGTTGTGTTGTTTCAATGGCTTCTCCCATTCGTCCTGTCCTTCTCCTGCTCGTaGAGGGCCGAGTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VNLGITVVLFQWLLPFVLSFSCS*RAESPC Trigger: GCACGGCGACTCGGCCCTCAACGAGCAGGAGAAGGA...CAGGACGAATGGGAGAAGCCATTGAAACAACACAACAGTTATACCCAAGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220500.2 |
||
| CDS GCA 90 bp | CCTAGACACTGTGTGGCCTGTCCCATGGCTAGGGCAAGTGGAGGTTaGTTTGGCAGATTGTGGGTTTCTAATATTGCACTGTTAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRHCVACPMARASGG*FGRLWVSNIALLRA Trigger: AGCTCTTAACAGTGCAATATTAGAAACCCACAATCTGCCAAAGCAACCTCCACTTGCCCTAGCCATGGGACAGGCCACACAGTGTCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CAA 90 bp | CTTACACAGGAGCGGGGGTCGGAACAGCTCCCAATTTGTAGTTTACATCACCCAAGTTGGTCCATACGGTaGTCCAGTTCCAGAAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LTQERGSEQLPICSLHHPSWSIR*SSSRRT Trigger: TGTTCTTCTGGAACTGGACAACCGTATGGACCAACT...TGGGTGATGTAAACTACAAATTGGGAGCTGTTCCGACCCCCGCTCCTGTGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CAA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGGGATGTTGCCCAAAGTaGGCATCAACCACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVYFHVDCLPQCECELLKGCCPK*ASTTSP Trigger: AGGAGAAGTGGTTGATGCCAACTTTGGGCAACATCC...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAAGTTACACTGATTGAATGCTTACACAGGAGCGGGGGTCGGAACAGCTCCTGTGACCTTGATACATaGAGACTGTTTAGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQVTLIECLHRSGGRNSSCDLDT*RLFSSG Trigger: ACCGGAGCTAAACAGTCTCAATGTATCAAGGTCACA...GGAGCTGTTCCGACCCCCGCTCCTGTGTAAGCATTCAATCAGTGTAACTTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CAA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTTCCTTCTCCTGCTCGTaGAGGGCCGAGTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSFASCCKLGSNVKRQKPSFSCS*RAESPC Trigger: GCACGGCGACTCGGCCCTCAACGAGCAGGAGAAGGA...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
||
| CDS-3UTR CAA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCACAGGCCGCTGGTATaGGATGCGTGGCTCGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SFASCCKLGSNVKRQKPVHRPLV*DAWLEQ Trigger: CTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACATGTGCAGTGCTGCTTTaGCCTGGTGCTAAGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTCAVLL*PGAKLW Trigger: CCACAGCTTAGCACCAGGCAAAAGCAGCACTGCACA...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS GCA 90 bp | GGCAGATTGTGGGTTTCTTCAGCATTTTCTTATTTGCTGTGTTCTTaGCACATTCTCTCCTCAGCTGCTCACTCATGGCTTGTAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLWVSSAFSYLLCS*HILSSAAHSWLVAL Trigger: GAGAGCTACAAGCCATGAGTGAGCAGCTGAGGAGAGAATGTGGCAAGAACACAGCAAATAAGAAAATGCTGAAGAAACCCACAATCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| CDS-3UTR CAA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTGTGACCTTGATACATaGAGACTGTTTAGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVYFHVDCLPQCECELLKCDLDT*RLFSSG Trigger: ACCGGAGCTAAACAGTCTCAATGTATCAAGGTCACA...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGTTATTTGCTGTGTTCTaGCCACATTCTCTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVYFHVDCLPQCECELLKLFAVF*PHSLLS Trigger: GCTGAGGAGAGAATGTGGCAAGAACACAGCAAATAA...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | CCGGTCTACTTCCATGTTGACTGTTTGCCACAATGTGAGTGTGAGCTCTTGAAGAAACACAAAAGGATGTaGCCCAAAGTTGGCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PVYFHVDCLPQCECELLKKHKRM*PKVGIN Trigger: GTTGATGCCAACTTTGGGCAACATCCTTTTGTGTTT...CTTCAAGAGCTCACACTCACATTGTGGCAAACAGTCAACATGGAAGTAGACCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGACGGGATAACTGTCTaGAGATTTTGGACTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTDGITV*RFWTSA Trigger: GGCCGAAGTCCAAAATCTCAAGACAGTTATCCCGTC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTCAAGTGGAGGTTGCTTaGGCAGATTGTGGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSQVEVA*ADCGFL Trigger: TAGAAACCCACAATCTGCCAAAGCAACCTCCACTTG...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCATAGCTAATGTAGGTAGTCTTCCACTGTGGCAAATGCACAGGACCCAAGGTTGCTTTGGCAGATaGTGGGTTTCTTCAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: KCIANVGSLPLWQMHRTQGCFGR*WVSSAF Trigger: AAATGCTGAAGAAACCCACAATCTGCCAAAGCAACC...TTGGGTCCTGTGCATTTGCCACAGTGGAAGACTACCTACATTAGCTATGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAAACTGTCTTGAGATTTaGGACTTCGGCCTCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTNCLEI*DFGLPN Trigger: GTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTT...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTGGTATAACTGTTGTGTaGTTTCAATGGCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSGITVV*FQWLLP Trigger: TGGGAGAAGCCATTGAAACAACACAACAGTTATACC...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCGACGGGATAACTGTCTaGAGATTTTGGACTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFASCCKLGSNVKRQKPVDGITV*RFWTSA Trigger: GGCCGAAGTCCAAAATCTCAAGACAGTTATCCCGTC...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACATTATTTGCTGTGTTCTaGCCACATTCTCTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTLFAVF*PHSLLS Trigger: GCTGAGGAGAGAATGTGGCAAGAACACAGCAAATAA...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | GCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTGGTTGCTTTGGCAGATaGTGGGTTTCTAATATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASCCKLGSNVKRQKPVPSGCFGR*WVSNIA Trigger: TGCAATATTAGAAACCCACAATCTGCCAAAGCAACC...ACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAAAACACAAAAGGATGTaGCCCAAAGTTGGCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTKHKRM*PKVGIN Trigger: GTTGATGCCAACTTTGGGCAACATCCTTTTGTGTTT...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGGTATAACTGTTGTGTaGTTTCAATGGCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTGITVV*FQWLLP Trigger: TGGGAGAAGCCATTGAAACAACACAACAGTTATACC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | TCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCCCAGTACAGGTTGCTTTGGCAGATaGTGGGTTTCTAATATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCCKLGSNVKRQKPVPSTGCFGR*WVSNIA Trigger: TGCAATATTAGAAACCCACAATCTGCCAAAGCAACC...TGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS-3UTR CAA 90 bp | TCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTGTCCAAGTGGAGGTTGCTTaGGCAGATTGTGGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SFASCCKLGSNVKRQKPVQVEVA*ADCGFL Trigger: TAGAAACCCACAATCTGCCAAAGCAACCTCCACTTG...GACAGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | ACAGTTAAACTTGTGAGTCTACAACAGAAGTCATCTGTAGTTAAACAGGAAACAAACTGTCTTGAGATTTaGGACTTCGGCCTCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TVKLVSLQQKSSVVKQETNCLEI*DFGLPN Trigger: GTTTGGGAGGCCGAAGTCCAAAATCTCAAGACAGTT...TGTTTCCTGTTTAACTACAGATGACTTCTGTTGTAGACTCACAAGTTTAACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144326.4 |
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| CDS-3UTR CAA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTCAAGTGGAGGTTGCTTaGGCAGATTGTGGGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSFASCCKLGSNVKRQKPQVEVA*ADCGFL Trigger: AAGAAACCCACAATCTGCCAAAGCAACCTCCACTTG...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
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| CDS CCA 90 bp | GATACATTGAGACTGTTTAGCTCCGGTACAGTCAAGCTGGATAGCTaGTGTTTACTATGGCAATATGATTGGTGTGCTTTATTTGATATT | + |
|
Preference number: 5 (lower is better) Translates to: DTLRLFSSGTVKLDS*CLLWQYDWCALFDI Trigger: AATATCAAATAAAGCACACCAATCATATTGCCATAGTAAACACCAGCTATCCAGCTTGACTGTACCGGAGCTAAACAGTCTCAATGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS-3UTR CAA 90 bp | AAATCATTTGCATCATGCTGTAAACTAGGAAGCAATGTAAAGCGACAAAAACCTTTATTTGCTGTGTTCTaGCCACATTCTCTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSFASCCKLGSNVKRQKPLFAVF*PHSLLS Trigger: GCTGAGGAGAGAATGTGGCAAGAACACAGCAAATAA...AGGTTTTTGTCGCTTTACATTGCTTCCTAGTTTACAGCATGATGCAAATGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000221092.2 ENSMUST00000222651.2 |
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| CDS CCA 90 bp | GGTACAGTCAAGCTGGATAGCTGGTGTTTACTATGGCAATATGATTaGTGTGCTTTATTTGATATTACACCATTGCTACAACTTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GTVKLDSWCLLWQYD*CALFDITPLLQLSK Trigger: TTTTGAAAGTTGTAGCAATGGTGTAATATCAAATAAAGCACACCAATCATATTGCCATAGTAAACACCAGCTATCCAGCTTGACTGTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS GCA 72 bp | AGCTCCTTCTCCTGCTCGTTGAGGGCCGAGTCGCCGTaGGGGAAAGGGGCAGCGGCGCTGCTGCCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFSCSLRAESP*GKGAAALLPAA Trigger: GGCGGCGGGCAGCAGCGCCGCTGCCCCTTTCCCGCACGGCGACTCGGCCCTCAACGAGCAGGAGAAGGAGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
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| CDS CCA 72 bp | CAACTCCTGACCGAGCCATCAGGCCTAGACACTGTGTaGCCTGTCCCATGGCTAGGGCAAGTGGAGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLLTEPSGLDTV*PVPWLGQVEVA Trigger: AGCAACCTCCACTTGCCCTAGCCATGGGACAGGCCACACAGTGTCTAGGCCTGATGGCTCGGTCAGGAGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS CCA 72 bp | GAGCCATCAGGCCTAGACACTGTGTGGCCTGTCCCATaGCTAGGGCAAGTGGAGGTTGCTTTGGCAGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: EPSGLDTVWPVP*LGQVEVALADC Trigger: ACAATCTGCCAAAGCAACCTCCACTTGCCCTAGCCATGGGACAGGCCACACAGTGTCTAGGCCTGATGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS GCA 72 bp | GGCCGCTGGTATTGGATGCGTGGCTCGAACAGATGCTaGATCTTTGGGGGTTTTACCATGACCGAGTACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRWYWMRGSNRC*IFGGFTMTEYP Trigger: TGGGTACTCGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222651.2 |
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| CDS GCA 72 bp | ACAGGCCGCTGGTATTGGATGCGTGGCTCGAACAGATaGTGCATCTTTGGGGGTTTTACCATGACCGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TGRWYWMRGSNR*CIFGGFTMTEY Trigger: GTACTCGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222651.2 |
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| CDS GCA 72 bp | GGCCGCTGGTATTGGATGCGTGGCTCGAACAGATGCTaGATCTTTGGGGGTTTTACCATGACCTTTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRWYWMRGSNRC*IFGGFTMTFVV Trigger: CACTACAAAGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
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| CDS CCA 72 bp | GTATTGGATGCGTGGCTCGAACAGATGCTGCATCTTTaGGGGTTTTACCATGACCGAGTACCCAGCTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: VLDAWLEQMLHL*GFYHDRVPSWT Trigger: AGTCCAGCTGGGTACTCGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222651.2 |
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| CDS GCA 72 bp | ACAGGCCGCTGGTATTGGATGCGTGGCTCGAACAGATaGTGCATCTTTGGGGGTTTTACCATGACCTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TGRWYWMRGSNR*CIFGGFTMTFV Trigger: TACAAAGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
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| CDS GCA 72 bp | TGTGTGGCCTGTCCCATGGCTAGGGCAAGTGGAGGTTaGTTTGGCAGATTGTGGGTTTCTAATATTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CVACPMARASGG*FGRLWVSNIAL Trigger: CAGTGCAATATTAGAAACCCACAATCTGCCAAAGCAACCTCCACTTGCCCTAGCCATGGGACAGGCCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS CCA 72 bp | GTATTGGATGCGTGGCTCGAACAGATGCTGCATCTTTaGGGGTTTTACCATGACCTTTGTAGTGCACCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLDAWLEQMLHL*GFYHDLCSAPA Trigger: TGCGGGTGCACTACAAAGGTCATGGTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 |
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| CDS CCA 72 bp | AATAATAAATCCCACAGGCCGCTGGTATTGGATGCGTaGCTCGAACAGATGCTGCATCTTTGGGGGTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: NNKSHRPLVLDA*LEQMLHLWGFY Trigger: GTAAAACCCCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATTTATTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 ENSMUST00000222651.2 |
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| CDS CCA 72 bp | TACTTCAAAATAATAAATCCCACAGGCCGCTGGTATTaGATGCGTGGCTCGAACAGATGCTGCATCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YFKIINPTGRWY*MRGSNRCCIFG Trigger: CCCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATTTATTATTTTGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 ENSMUST00000222651.2 |
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| CDS CAA 90 bp | TGGCAGATTGTGGGTTTCTTCAGCATTTTCTTATTTGCTGTGTTCTaGCCACATTCTCTCCTCAGCTGCTCACTCATGGCTTGTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WQIVGFFSIFLFAVF*PHSLLSCSLMACSS Trigger: AGAGCTACAAGCCATGAGTGAGCAGCTGAGGAGAGAATGTGGCAAGAACACAGCAAATAAGAAAATGCTGAAGAAACCCACAATCTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221092.2 |
||
| CDS CAA 72 bp | TTACTTCAAAATAATAAATCCCACAGGCCGCTGGTATaGGATGCGTGGCTCGAACAGATGCTGCATCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQNNKSHRPLV*DAWLEQMLHLW Trigger: CCAAAGATGCAGCATCTGTTCGAGCCACGCATCCAATACCAGCGGCCTGTGGGATTTATTATTTTGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000144326.4 ENSMUST00000220500.2 ENSMUST00000222651.2 |
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| CDS CCA 72 bp | AGACTGTTTAGCTCCGGTACAGTCAAGCTGGATAGCTaGTGTTTACTATGGCAATATGATTGGTGTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RLFSSGTVKLDS*CLLWQYDWCAL Trigger: TAAAGCACACCAATCATATTGCCATAGTAAACACCAGCTATCCAGCTTGACTGTACCGGAGCTAAACAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS CCA 72 bp | AACACAACAGCCAATGACATCACCAGTTGTAAAAGTTaGTCCATACGGTTGTCCAGTTCCAGAAGAACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: NTTANDITSCKS*SIRLSSSRRTK Trigger: TTTTGTTCTTCTGGAACTGGACAACCGTATGGACCAACTTTTACAACTGGTGATGTCATTGGCTGTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000144326.4 ENSMUST00000222023.2 ENSMUST00000222239.2 ENSMUST00000222651.2 |
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| CDS CAA 72 bp | CTGGTAAAGTTATTAACTTGCTGTGACCTTGATACATaGAGACTGTTTAGCTCCGGTACAGTCAAGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LVKLLTCCDLDT*RLFSSGTVKLD Trigger: ATCCAGCTTGACTGTACCGGAGCTAAACAGTCTCAATGTATCAAGGTCACAGCAAGTTAATAACTTTACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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| CDS CAA 90 bp | ACATCATTACTGGTAAAGTTATTAACTTGCTGTGACCTTGATACATaGAGACTGTTTAGCTCCGGTACAGTCAAGCTGGATAGCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSLLVKLLTCCDLDT*RLFSSGTVKLDSWC Trigger: ACACCAGCTATCCAGCTTGACTGTACCGGAGCTAAACAGTCTCAATGTATCAAGGTCACAGCAAGTTAATAACTTTACCAGTAATGATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS CCA 72 bp | TTAGGAAACCATTGGATGAAGTTTCTCCAACTCCATTaGAGTAGTGATCTGTTTCCATGTCTACATCATTAC | + |
|
Preference number: 6 (lower is better) Translates to: LGNHWMKFLQLH*SSDLFPCLHHY Trigger: GTAATGATGTAGACATGGAAACAGATCACTACTCCAATGGAGTTGGAGAAACTTCATCCAATGGTTTCCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS CCA 72 bp | AAGCTGGATAGCTGGTGTTTACTATGGCAATATGATTaGTGTGCTTTATTTGATATTACACCATTGCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: KLDSWCLLWQYD*CALFDITPLLQ Trigger: TTGTAGCAATGGTGTAATATCAAATAAAGCACACCAATCATATTGCCATAGTAAACACCAGCTATCCAGCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
||
| CDS CAA 72 bp | GGTGTTTACTATGGCAATATGATTGGTGTGCTTTATTaGATATTACACCATTGCTACAACTTTCAAAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVYYGNMIGVLY*ILHHCYNFQNQ Trigger: CTGGTTTTGAAAGTTGTAGCAATGGTGTAATATCAAATAAAGCACACCAATCATATTGCCATAGTAAACACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144326.4 ENSMUST00000222651.2 |
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