Pregenerated sensors for RANBP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074909Ensembl transcript IDs: ENSMUST00000099525.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTAACACTGACAATTTATTGAGCACTTACTGGTTCGGACATATTTaGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SNTDNLLSTYWFGHI*SVTYTVLTTGSGSH Trigger: GTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAAATATGTCCGAACCAGTAAGTGCTCAATAAATTGTCAGTGTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR GCA 90 bp | GCATCTTGTGACAGTCACAGACATCTTGGCACAAAATATACCGTCTaGCCAGCATCAATAGGTCAGACAAATAACAATTTATACATTTCA | + |
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Preference number: 1 (lower is better) Translates to: ASCDSHRHLGTKYTV*PASIGQTNNNLYIS Trigger: TGAAATGTATAAATTGTTATTTGTCTGACCTATTGATGCTGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGACTGTCACAAGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR-3UTR CCA 90 bp | TCCGTCCCTCACTGTAACAAACACAGTATTACCAAGGAAGAACAAGTCTGCCACCAGTCACAGACATCTTaGCACAAAATATACCGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SVPHCNKHSITKEEQVCHQSQTS*HKIYRL Trigger: CAGACGGTATATTTTGTGCCAAGATGTCTGTGACTG...GTGGCAGACTTGTTCTTCCTTGGTAATACTGTGTTTGTTACAGTGAGGGACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACACCACAGTTTAAGAAGTaGCACGTGCAAAGTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LVCYIHSTHNRLRKSQQTPQFKK*HVQSKQ Trigger: CTGTTTACTTTGCACGTGTCACTTCTTAAACTGTGG...TGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCACATGTAACAATACCTaGCTCCCACAAACACTGACT | + |
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Preference number: 2 (lower is better) Translates to: VCYIHSTHNRLRKSQQTFTCNNT*LPQTLT Trigger: AGTCAGTGTTTGTGGGAGTCAGGTATTGTTACATGT...GAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACAAAGGAAGAACAAGTCTaGCACTGTATTCTTCACCCT | + |
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Preference number: 2 (lower is better) Translates to: LVCYIHSTHNRLRKSQQTKEEQV*HCILHP Trigger: AGGGTGAAGAATACAGTGGCAGACTTGTTCTTCCTT...TGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR-3UTR GCA 90 bp | CAATTTATTGAGCACTTACTGGTTCGGACATATTTGGTCTGTTACATACACAGTCATAGAAGTATGAACTaGTTAGCAGAGAGAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: QFIEHLLVRTYLVCYIHSHRSMN*LAERNG Trigger: ACCATTTCTCTCTGCTAAGCAGTTCATACTTCTATG...ACTGTGTATGTAACAGACCAAATATGTCCGAACCAGTAAGTGCTCAATAAATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR-3UTR CAA 90 bp | AGTCTGCCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCACAGTCACAGACATCTaGGCACAAAATATACCGTCT | + |
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Preference number: 3 (lower is better) Translates to: SLPLYSSPSIPEMFNLEVTVTDI*AQNIPS Trigger: AGACGGTATATTTTGTGCCAAGATGTCTGTGACTGT...GACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGGCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR TCA 72 bp | AACTGGAAGCACAGGTTACAACCACAGTTTAAGAAGTaGCACGTGCAAAGTAAACAGGAGACCTTAACACTA | + |
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Preference number: 3 (lower is better) Translates to: NWKHRLQPQFKK*HVQSKQETLTL Trigger: TAGTGTTAAGGTCTCCTGTTTACTTTGCACGTGTCACTTCTTAAACTGTGGTTGTAACCTGTGCTTCCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR GCA 72 bp | TTCACTTATATTGTAGAAAACAACTCCTACAACCACTaGCATACCTTGACACACTCAGTTCTAGCATCCGTC | + |
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Preference number: 3 (lower is better) Translates to: FTYIVENNSYNH*HTLTHSVLASV Trigger: GACGGATGCTAGAACTGAGTGTGTCAAGGTATGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR GCA 72 bp | GACAGTCACAGACATCTTGGCACAAAATATACCGTCTaGCCAGCATCAATAGGTCAGACAAATAACAATTTA | + |
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Preference number: 3 (lower is better) Translates to: DSHRHLGTKYTV*PASIGQTNNNL Trigger: TAAATTGTTATTTGTCTGACCTATTGATGCTGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR CCA 72 bp | GACAATTTATTGAGCACTTACTGGTTCGGACATATTTaGTCTGTTACATACACAGTACTCACAACAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: DNLLSTYWFGHI*SVTYTVLTTGS Trigger: TGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAAATATGTCCGAACCAGTAAGTGCTCAATAAATTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR GCA 72 bp | TGTAACAAACACAGTATTACCAAGGAAGAACAAGTCTaGCACTGTATTCTTCACCCTCAATTCCAGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: CNKHSITKEEQV*HCILHPQFQKC Trigger: ACATTTCTGGAATTGAGGGTGAAGAATACAGTGGCAGACTTGTTCTTCCTTGGTAATACTGTGTTTGTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR TCA 72 bp | CCAAAACATGTAACAATACCTGACTCCCACAAACACTaGCTATTTAGTATTTATTACACTGTTCTAGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: PKHVTIPDSHKH*LFSIYYTVLVC Trigger: ACAGACTAGAACAGTGTAATAAATACTAAATAGTCAGTGTTTGTGGGAGTCAGGTATTGTTACATGTTTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | CAATTTATTGAGCACTTACTGGTTCGGACATATTTGGTCTGTTACATACACAGTGGTCGCCGGCAACCCTaGAGACCCGGCCGCCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QFIEHLLVRTYLVCYIHSGRRQP*RPGRRH Trigger: ATGGCGGCGGCCGGGTCTGCAGGGTTGCCGGCGACC...ACTGTGTATGTAACAGACCAAATATGTCCGAACCAGTAAGTGCTCAATAAATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | TCACAGACATCTTGGCACAAAATATACCGTCTGCCCAGCATCAATAGGTCAGACAGAGCCAGCTGGCGTTaGAGGTTACTAAGCCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SQTSWHKIYRLPSINRSDRASWR*RLLSLE Trigger: CTCTAGGCTTAGTAACCTGCAACGCCAGCTGGCTCT...GTCTGACCTATTGATGCTGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | TCACAGACATCTTGGCACAAAATATACCGTCTGCCCAGCATCAATAGGTCAGACCATGGCTTCCGCAGCTaGCACTCGAACATTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: SQTSWHKIYRLPSINRSDHGFRS*HSNIVM Trigger: CATGACAATGTTCGAGTGGCAGCTGCGGAAGCCATG...GTCTGACCTATTGATGCTGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | TTTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACTTCCAGTCAGGGCTCTaGAGCATCTGCATGATATGC | + |
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Preference number: 4 (lower is better) Translates to: FGLLHTQYSQQAQEVTTDFQSGL*SICMIC Trigger: GCATATCATGCAGATGCTTCAGAGCCCTGACTGGAA...GTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | CCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTTGTTGTCTCGCATATTaGGAAGCATCGGCCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: PLYSSPSIPEMFNLEVSLCCLAY*EASATG Trigger: TCCGGTGGCCGATGCTTCTCAATATGCGAGACAACA...AAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | TCACAGACATCTTGGCACAAAATATACCGTCTGCCCAGCATCAATAGGTCAGACTCTGAAGCATCTGCATaGTATGCTCCTTGGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: SQTSWHKIYRLPSINRSDSEASA*YAPWSL Trigger: CAATGACCAAGGAGCATATCATGCAGATGCTTCAGA...GTCTGACCTATTGATGCTGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | TCCGTCCCTCACTGTAACAAACACAGTATTACCAAGGAAGAACAAGTCTGCCACTCAGAAGTCTGTATCTaGCGGACAACATTAGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: SVPHCNKHSITKEEQVCHSEVCI*RTTLAR Trigger: CCTAGCTAATGTTGTCCGTCAGATACAGACTTCTGA...GTGGCAGACTTGTTCTTCCTTGGTAATACTGTGTTTGTTACAGTGAGGGACGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCTCTCACCTCATAACCTaGTCTTCTATTTCGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: VCYIHSTHNRLRKSQQTFSHLIT*SSISDG Trigger: GCCGTCCGAAATAGAAGAGCAGGTTATGAGGTGAGA...GAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACAAGACCTTCTGGCCAATaGTTAGTGCCACTCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LVCYIHSTHNRLRKSQQTRPSGQ*LVPLSS Trigger: AGATGAGAGTGGCACTAACCATTGGCCAGAAGGTCT...TGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | TCACAGACATCTTGGCACAAAATATACCGTCTGCCCAGCATCAATAGGTCAGACGAATTTCAGACCTTCTaGCCAATGGTTAGTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SQTSWHKIYRLPSINRSDEFQTF*PMVSAT Trigger: AGTGGCACTAACCATTGGCCAGAAGGTCTGAAATTC...GTCTGACCTATTGATGCTGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | TGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCTTGAAGTGCCAGAAAACGTaGAGTGCAACTTCCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: CYIHSTHNRLRKSQQTFLKCQKT*SATSHR Trigger: TCTGTGGGAAGTTGCACTTCACGTTTTCTGGCACTT...CAAGAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCACCAGTGGGAGATATTaGTCAAAGTCTTTGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VCYIHSTHNRLRKSQQTFTSGRY*SKSLPR Trigger: CCTTGGCAAAGACTTTGAGCAATATCTCCCACTGGT...GAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | AGTCTGCCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCGTATCAGTTCAATCTTaGCATCCCTCTGCACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SLPLYSSPSIPEMFNLEVVSVQS*HPSALQ Trigger: CTGAAGTGCAGAGGGATGTCAAGATTGAACTGATAC...GACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGGCAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | TTTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATGATATCCAAATCGTaGCGATCCTGGTTCCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: FGLLHTQYSQQAQEVTTDMISKS*RSWFPK Trigger: TTTTGGGAACCAGGATCGTCACGATTTGGATATCAT...GTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCCAGTTTCAGATAAGGTaGCTATTACTTCCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCYIHSTHNRLRKSQQTFQFQIR*LLLPEP Trigger: TGGCTCTGGAAGTAATAGTCACCTTATCTGAAACTG...GAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | CCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTAGCAGTCTTGATAAGTaGCTCAATAACCAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLYSSPSIPEMFNLEVSLSSLDK*LNNQWE Trigger: CTCCCACTGGTTATTGAGCCACTTATCAAGACTGCT...AAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | TGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCTTGATCTTGACATCCCTCTaGACTTCAGGAGGTAGATTT | + |
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Preference number: 4 (lower is better) Translates to: CYIHSTHNRLRKSQQTFLILTSL*TSGGRF Trigger: AAATCTACCTCCTGAAGTGCAGAGGGATGTCAAGAT...CAAGAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | TTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACACTTAGGTACAGTATCTaGAATCTCAACAAGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: LVCYIHSTHNRLRKSQQTLRYSI*NLNKGF Trigger: GAATCCCTTGTTGAGATTGCAGATACTGTACCTAAG...TGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | TTTGCATCTTGTGACAGTCACAGACATCTTGGCACAAAATATACCGTCTGCCCACATCTATCAAATTCCTaGCCAGCACCGCAAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: FASCDSHRHLGTKYTVCPHLSNS*PAPQKY Trigger: ATATTTTTGCGGTGCTGGCCAGGAATTTGATAGATG...TGGGCAGACGGTATATTTTGTGCCAAGATGTCTGTGACTGTCACAAGATGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACACGGCAAGTCCAACATaGCTAATGCATTCAATAGTT | + |
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Preference number: 4 (lower is better) Translates to: FGLLHTQYSQQAQEVTTDTASPT*LMHSIV Trigger: AACTATTGAATGCATTAGCCATGTTGGACTTGCCGT...GTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | TGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCTTGAGTGAATCGAATCAATaGGGAATTTCAGACCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CYIHSTHNRLRKSQQTFLSESNQ*GISDLL Trigger: CAGAAGGTCTGAAATTCCTCATTGATTCGATTCACT...CAAGAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | CCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTATCATTGCTAATATATaGGGCACAGCCTGTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: PLYSSPSIPEMFNLEVSLIIANI*GTACAI Trigger: TATTGCACAGGCTGTGCCTCATATATTAGCAATGAT...AAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | TGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCTTGATGAGGCACAGCCTGTaGAATAATATTCGTATGCTT | + |
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Preference number: 4 (lower is better) Translates to: CYIHSTHNRLRKSQQTFLMRHSL*NNIRML Trigger: AAGCATACGAATATTATTGCACAGGCTGTGCCTCAT...CAAGAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | TTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACAGGATCACATATAAACTaGCACATCTGTGAAAGATAC | + |
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Preference number: 4 (lower is better) Translates to: LVCYIHSTHNRLRKSQQTGSHIN*HICERY Trigger: GTATCTTTCACAGATGTGGCAGTTTATATGTGATCC...TGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | CACTGTAACAAACACAGTATTACCAAGGAAGAACAAGTCTGCCACTGTATTCTTATGCCAAAGCTTTGCTaGTCTCCGAGGTTTACAAAC | + |
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Preference number: 4 (lower is better) Translates to: HCNKHSITKEEQVCHCILMPKLC*SPRFTN Trigger: GTTTGTAAACCTCGGAGACCAGCAAAGCTTTGGCAT...AAGAATACAGTGGCAGACTTGTTCTTCCTTGGTAATACTGTGTTTGTTACAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | AAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACCACTGCCATACCTTGTTCCTCGAAGAAGCTTaGGTTCCTTTTGAACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: KRFTYIVENNSYNHCHTLFLEEA*VPFEQR Trigger: TCGCTGTTCAAAAGGAACTCAAGCTTCTTCGAGGAA...CAAGGTATGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | CCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTAATACTCAACATACTTaGATGAGGTTGGACTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: PLYSSPSIPEMFNLEVSLNTQHT*MRLDCN Trigger: ATTGCAGTCCAACCTCATTCAAGTATGTTGAGTATT...AAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | CCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTATTGCTCAAAGTCTTTaGCAAGGATTTTACACATTC | + |
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Preference number: 4 (lower is better) Translates to: PLYSSPSIPEMFNLEVSLIAQSL*QGFYTF Trigger: GAATGTGTAAAATCCTTGGCAAAGACTTTGAGCAAT...AAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | AAACCAGTTTGGTTAAGGAGATTTAAAAGTTCTCATAACTCTCAGCTGGATACTGTGCCCTTCAAGTTTTaGCTTCAAAATTCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KPVWLRRFKSSHNSQLDTVPFKF*LQNSSQ Trigger: CTGGGAGGAATTTTGAAGGCAAAACTTGAAGGGCAC...AGTATCCAGCTGAGAGTTATGAGAACTTTTAAATCTCCTTAACCAAACTGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | AAACCAGTTTGGTTAAGGAGATTTAAAAGTTCTCATAACTCTCAGCTGGATACTAGCATCTGCATGATATaGTCCTTGGTCATTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KPVWLRRFKSSHNSQLDTSICMI*SLVIGK Trigger: TTTGCCAATGACCAAGGAGCATATCATGCAGATGCT...AGTATCCAGCTGAGAGTTATGAGAACTTTTAAATCTCCTTAACCAAACTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | AAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACCACTGCCATACCTTGATTAGTGGGAGTAGCTaGTCAAACCATGGCAAAATT | + |
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Preference number: 4 (lower is better) Translates to: KRFTYIVENNSYNHCHTLISGSS*SNHGKI Trigger: AATTTTGCCATGGTTTGAGCAGCTACTCCCACTAAT...CAAGGTATGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR GCA 90 bp | CCATATGAAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACCACTGCCAGAGGTTGGACTGCAATaGTCTATGATGTCATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: PYEKVHLYCRKQLLQPLPEVGLQ*SMMSSN Trigger: ATTTGATGACATCATAGAGCATTGCAGTCCAACCTC...TGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTTCATATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | CAGGAGTACCATATGAAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACTGGCTCAATAACCAGTaGGAGATATTGCTCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QEYHMKRFTYIVENNSYNWLNNQ*EILLKV Trigger: GACTTTGAGCAATATCTCCCACTGGTTATTGAGCCA...GTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTTCATATGGTACTCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | AAACCAGTTTGGTTAAGGAGATTTAAAAGTTCTCATAACTCTCAGCTGGATACTCCAATCACAACTGGGTaGTTGCTTTCAATTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KPVWLRRFKSSHNSQLDTPITTG*LLSIRS Trigger: TGACCTAATTGAAAGCAACCACCCAGTTGTGATTGG...AGTATCCAGCTGAGAGTTATGAGAACTTTTAAATCTCCTTAACCAAACTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| 3UTR CAA 72 bp | TTAACCCCCATTCTGAATAAAGGTTTCCCTTTATGTTaGAAATGGGAGTTACGGGGATATGACATACAAACA | + |
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Preference number: 4 (lower is better) Translates to: LTPILNKGFPLC*KWELRGYDIQT Trigger: TGTTTGTATGTCATATCCCCGTAACTCCCATTTCAAACATAAAGGGAAACCTTTATTCAGAATGGGGGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR TCA 90 bp | AAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACCACTGCCATACCTTGTTCCGAATCAGCTCTTaGAGTTTAATTACCAAGATG | + |
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Preference number: 4 (lower is better) Translates to: KRFTYIVENNSYNHCHTLFRISS*SLITKM Trigger: CATCTTGGTAATTAAACTTCAAGAGCTGATTCGGAA...CAAGGTATGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CCA 90 bp | AAACCAGTTTGGTTAAGGAGATTTAAAAGTTCTCATAACTCTCAGCTGGATACTGCACAGGGGTCTTCATaGCTAATAGTTTCATTAATT | + |
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Preference number: 4 (lower is better) Translates to: KPVWLRRFKSSHNSQLDTAQGSS*LIVSLI Trigger: AATTAATGAAACTATTAGCCATGAAGACCCCTGTGC...AGTATCCAGCTGAGAGTTATGAGAACTTTTAAATCTCCTTAACCAAACTGGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS TCA 90 bp | ATCCGGCGTGTCGACATTTCCAGTCAGGGCTCTGAAGCATCTGCATaGTATGCTCCTTGGTCATTGGCAAAACAACTTTCCCACCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: IRRVDISSQGSEASA*YAPWSLAKQLSHQV Trigger: GACTTGGTGGGAAAGTTGTTTTGCCAATGACCAAGGAGCATATCATGCAGATGCTTCAGAGCCCTGACTGGAAATGTCGACACGCCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CTGTCAGATTCTTTCAGTGTTAAATGTCTCCTCAGTACCTCCTCCACACCCATGACATTAGCTAGGCGTTaGGCACAGGGGTCTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: LSDSFSVKCLLSTSSTPMTLARR*AQGSSW Trigger: CCATGAAGACCCCTGTGCCAAACGCCTAGCTAATGT...CATGGGTGTGGAGGAGGTACTGAGGAGACATTTAACACTGAAAGAATCTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | AGTCTGCCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCCAGTGCGGCAGCCATTaGTCTCACCTCATAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: SLPLYSSPSIPEMFNLEVQCGSH*SHLITC Trigger: GCAGGTTATGAGGTGAGACAAATGGCTGCCGCACTG...GACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGGCAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CAATTTATTGAGCACTTACTGGTTCGGACATATTTGGTCTGTTACATACACAGTCAGAGCCAGCTGGCGTaGCAGGTTACTAAGCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: QFIEHLLVRTYLVCYIHSQSQLA*QVTKPR Trigger: TCTAGGCTTAGTAACCTGCAACGCCAGCTGGCTCTG...ACTGTGTATGTAACAGACCAAATATGTCCGAACCAGTAAGTGCTCAATAAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | TTTGGTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACAGTATCAGTTCAATCTaGACATCCCTCTGCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: FGLLHTQYSQQAQEVTTDSISSI*TSLCTS Trigger: TGAAGTGCAGAGGGATGTCAAGATTGAACTGATACT...GTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | AGTCTGCCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTATGCTCCTTGGTCATaGGCAAAACAACTTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SLPLYSSPSIPEMFNLEVYAPWS*AKQLSH Trigger: GTGGGAAAGTTGTTTTGCCAATGACCAAGGAGCATA...GACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGGCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCTGCATGATATGCTCCTaGGTCATTGGCAAAACAACT | + |
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Preference number: 5 (lower is better) Translates to: VCYIHSTHNRLRKSQQTFCMICS*VIGKTT Trigger: AGTTGTTTTGCCAATGACCAAGGAGCATATCATGCA...GAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTTACATACACAGTACTCACAACAGGCTCAGGAAGTCACAACAGACATTCCTGTTTCATCTAGAATaGGTTCCATTTGCTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: VCYIHSTHNRLRKSQQTFLFHLE*VPFADG Trigger: GCCATCAGCAAATGGAACCAATTCTAGATGAAACAG...GAATGTCTGTTGTGACTTCCTGAGCCTGTTGTGAGTACTGTGTATGTAACAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | ATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTTCTTTGTCTTCAGGAGGTAGATTaGGATAGACCTCCTCAAACC | + |
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Preference number: 5 (lower is better) Translates to: ILHPQFQKCLTWKSPFLCLQEVD*DRPPQT Trigger: GGTTTGAGGAGGTCTATCCAAATCTACCTCCTGAAG...ACAAAGAAAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCTCCCTTAGCTCAACAACGTGTTaGAGTGAGGGCATAAATATA | + |
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Preference number: 5 (lower is better) Translates to: PLYSSPSIPEMFNLEVSLSSTTC*SEGINI Trigger: TATATTTATGCCCTCACTCAAACACGTTGTTGAGCT...AAGGGAGACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | AGTAAACAGGAGACCTTAACACTAATCCTGGAGAAACATAGAAGTATGAACTGCAACCAGTGGGAGATATaGCTCAAAGTCTTTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SKQETLTLILEKHRSMNCNQWEI*LKVFAK Trigger: CTTGGCAAAGACTTTGAGCAATATCTCCCACTGGTT...GCAGTTCATACTTCTATGTTTCTCCAGGATTAGTGTTAAGGTCTCCTGTTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CAATTTATTGAGCACTTACTGGTTCGGACATATTTGGTCTGTTACATACACAGTCTGAGCCACGAATTCTaGCACATTCCAAGAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: QFIEHLLVRTYLVCYIHSLSHEF*HIPRER Trigger: CCTTTCTCTTGGAATGTGCAAGAATTCGTGGCTCAG...ACTGTGTATGTAACAGACCAAATATGTCCGAACCAGTAAGTGCTCAATAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CCATATGAAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACCACTGCCACTGCTCATCATCGAGTaGAGATGTGCATTCCAACCA | + |
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Preference number: 5 (lower is better) Translates to: PYEKVHLYCRKQLLQPLPLLIIE*RCAFQP Trigger: TGGTTGGAATGCACATCTCAACTCGATGATGAGCAG...TGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTTCATATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CCATATGAAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACCACTGCCACAACGGAAGCAATGGTaGTCACAAGTTGTTCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: PYEKVHLYCRKQLLQPLPQRKQW*SQVVLR Trigger: CCTTAGAACAACTTGTGACAACCATTGCTTCCGTTG...TGGCAGTGGTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTTCATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | AGTCTGCCACTGTATTCTTCACCCTCAATTCCAGAAATGTTTAACCTGGAAGTCAAATACTCAACATACTaGAATGAGGTTGGACTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SLPLYSSPSIPEMFNLEVKYSTY*NEVGLQ Trigger: TTGCAGTCCAACCTCATTCAAGTATGTTGAGTATTT...GACTTCCAGGTTAAACATTTCTGGAATTGAGGGTGAAGAATACAGTGGCAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | CAGGAGTACCATATGAAAAGGTTCACTTATATTGTAGAAAACAACTCCTACAACTGGATGCTCCTGATCTaGAATACACTGGTCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: QEYHMKRFTYIVENNSYNWMLLI*NTLVQQ Trigger: TTGTTGGACCAGTGTATTCAAGATCAGGAGCATCCA...GTTGTAGGAGTTGTTTTCTACAATATAAGTGAACCTTTTCATATGGTACTCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS-3UTR CAA 90 bp | AGTAAACAGGAGACCTTAACACTAATCCTGGAGAAACATAGAAGTATGAACTGCCATCATCTTCACAACTaGTTCCGTGTATTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: SKQETLTLILEKHRSMNCHHLHN*FRVFHK Trigger: TTTGTGGAATACACGGAACAAGTTGTGAAGATGATG...GCAGTTCATACTTCTATGTTTCTCCAGGATTAGTGTTAAGGTCTCCTGTTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS TCA 72 bp | ATTAATCCGGCGTGTCGACATTTCCAGTCAGGGCTCTaGAGCATCTGCATGATATGCTCCTTGGTCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: INPACRHFQSGL*SICMICSLVIG Trigger: GCCAATGACCAAGGAGCATATCATGCAGATGCTTCAGAGCCCTGACTGGAAATGTCGACACGCCGGATTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS GCA 72 bp | CCAGTCTGTCTAGGGCACTCTCAGCAGCAACCGCATTaGTGTCAAAGTCATCTTCTTCCATTTCATCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PVCLGHSQQQPH*CQSHLLPFHQH Trigger: ATGCTGATGAAATGGAAGAAGATGACTTTGACAGCAATGCGGTTGCTGCTGAGAGTGCCCTAGACAGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS CCA 72 bp | GTTTCAGATAAGGTGACTATTACTTCCAGAGCCAGCTaGCGTTGCAGGTTACTAAGCCTAGAGTCTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: VSDKVTITSRAS*RCRLLSLESPH Trigger: GTGTGGAGACTCTAGGCTTAGTAACCTGCAACGCCAGCTGGCTCTGGAAGTAATAGTCACCTTATCTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS TCA 72 bp | GTCGACATTTCCAGTCAGGGCTCTGAAGCATCTGCATaGTATGCTCCTTGGTCATTGGCAAAACAACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VDISSQGSEASA*YAPWSLAKQLS Trigger: GGAAAGTTGTTTTGCCAATGACCAAGGAGCATATCATGCAGATGCTTCAGAGCCCTGACTGGAAATGTCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS CAA 72 bp | TTGAGAAGCATCGGCCACCGGAAATACTCAACATACTaGAATGAGGTTGGACTGCAATGCTCTATGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRSIGHRKYSTY*NEVGLQCSMMS Trigger: TGACATCATAGAGCATTGCAGTCCAACCTCATTCAAGTATGTTGAGTATTTCCGGTGGCCGATGCTTCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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| CDS CAA 90 bp | TCATTCACAGCCTGTAAGATCCCAGGAAGCAAATCCGCAAAGTCTTaGAAAAGAGCAATATTGTTTTCATTAGCAAGGACGAACGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SFTACKIPGSKSAKS*KRAILFSLARTNVA Trigger: AGCTACGTTCGTCCTTGCTAATGAAAACAATATTGCTCTTTTCAAAGACTTTGCGGATTTGCTTCCTGGGATCTTACAGGCTGTGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099525.5 |
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