Pregenerated sensors for RANBP3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048424Ensembl transcript IDs: ENSMUST00000227191.3
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACCGTTTCATGACCCTGAGGTTGACACTGTCTCTCTGCCATGCTaGCATTCTAACCTACTTGGGCACCTCCTGGCATTTCTGTATGGG | + |
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Preference number: 1 (lower is better) Translates to: SPFHDPEVDTVSLPC*HSNLLGHLLAFLYG Trigger: CCCATACAGAAATGCCAGGAGGTGCCCAAGTAGGTTAGAATGTCAGCATGGCAGAGAGACAGTGTCAACCTCAGGGTCATGAAACGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR GCA 90 bp | GACCAAGAAGAAACATGCCAAGGGATAGAGAAGACCTCTGTTCTCTaGTTCACTTTAAAAATCACCATACAATCAGAATGTTCCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: DQEETCQGIEKTSVL*FTLKITIQSECSLK Trigger: TTTGAGGGAACATTCTGATTGTATGGTGATTTTTAAAGTGAAGCAGAGAACAGAGGTCTTCTCTATCCCTTGGCATGTTTCTTCTTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR TCA 90 bp | CTGCGTTTACTCCTTTTCCTGATGGCAAGTCTTTCTCTCTTCTTCTaGTACCTTTTCTATCTTCTTCTGAACATATTAATTAAATCCTAC | + |
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Preference number: 1 (lower is better) Translates to: LRLLLFLMASLSLFF*YLFYLLLNILIKSY Trigger: GTAGGATTTAATTAATATGTTCAGAAGAAGATAGAAAAGGTATCAGAAGAAGAGAGAAAGACTTGCCATCAGGAAAAGGAGTAAACGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR TCA 90 bp | GGACTCTTGCAATGTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTGTTTACTCCTTTTCCTaGTGGCAAGTCTTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GLLQCMSCLCSLSPFHDPVYSFS*WQVFLS Trigger: AGAGAGAAAGACTTGCCATCAGGAAAAGGAGTAAAC...AGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATACATTGCAAGAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR CAA 90 bp | CCTCCTGGCATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTaGCCATCTGTACAGAAGACCAAAGAAAATCAGTCGACTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: PPGISVWVTSKSLSH*PSVQKTKENQSTQL Trigger: AAGTTGAGTCGACTGATTTTCTTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAATGCCAGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR TCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAATATTGCCCTCAATTCTaGCATGGATTTTCATGCATG | + |
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Preference number: 2 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKYCPQF*HGFSCM Trigger: CATGCATGAAAATCCATGTCAGAATTGAGGGCAATA...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR TCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAACTAACATCCTATGGGTaGAGCAGTACTTTCATATCT | + |
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Preference number: 2 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKLTSYG*SSTFIS Trigger: AGATATGAAAGTACTGCTTCACCCATAGGATGTTAG...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR GCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAATACTCAGCGATTGTATaGCAGACTTTCAGATTTAAG | + |
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Preference number: 2 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKYSAIV*QTFRFK Trigger: CTTAAATCTGAAAGTCTGGCATACAATCGCTGAGTA...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAACCCTCAATTCTGACATaGATTTTCATGCATGATTCA | + |
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Preference number: 2 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKPSILT*IFMHDS Trigger: TGAATCATGCATGAAAATCCATGTCAGAATTGAGGG...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGATTCATCAACTCTTGTaGGCTGACTTTGAGTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKIHQLL*ADFESN Trigger: ATTTGACTCAAAGTCAGCTCACAAGAGTTGATGAAT...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGAAAGCTAACATCCTATaGGTGAAGCAGTACTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKKANIL*VKQYFH Trigger: ATGAAAGTACTGCTTCACCCATAGGATGTTAGCTTT...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGATTTCATTTCCAGTATaGGACCAAGAAGAAACATGC | + |
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Preference number: 2 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKISFPV*DQEETC Trigger: GCATGTTTCTTCTTGGTCCCATACTGGAAATGAAAT...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR GCA 72 bp | CACCGTTTCATGACCCTGAGGTTGACACTGTCTCTCTaGCATGCTGACATTCTAACCTACTTGGGCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: HRFMTLRLTLSL*HADILTYLGTS Trigger: GGAGGTGCCCAAGTAGGTTAGAATGTCAGCATGGCAGAGAGACAGTGTCAACCTCAGGGTCATGAAACGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR TCA 72 bp | CATGACCCTGAGGTTGACACTGTCTCTCTGCCATGCTaGCATTCTAACCTACTTGGGCACCTCCTGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: HDPEVDTVSLPC*HSNLLGHLLAF Trigger: AAATGCCAGGAGGTGCCCAAGTAGGTTAGAATGTCAGCATGGCAGAGAGACAGTGTCAACCTCAGGGTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR TCA 72 bp | GCCTCTCTGATGATGCTTCTTGTTAGACTCATCCTATaGTTTGTATTCTGCCACAGAGTGGGAGGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: ASLMMLLVRLIL*FVFCHRVGGRG Trigger: TCCCCTCCCTCCCACTCTGTGGCAGAATACAAATCATAGGATGAGTCTAACAAGAAGCATCATCAGAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR CAA 90 bp | GTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTGAGGTTGACACTGAAGTCTCTTTCTCATTaGCCATCTGTACAGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: VCHVSAPCHRFMTLRLTLKSLSH*PSVQKT Trigger: GGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTT...CAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR-3UTR CAA 90 bp | GGACTCTTGCAATGTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTATGCGGATACTTCTGTaGTATGGAGGCAATAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: GLLQCMSCLCSLSPFHDPMRILL*YGGNKA Trigger: TGCTTTATTGCCTCCATACAACAGAAGTATCCGCAT...AGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATACATTGCAAGAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR GCA 72 bp | TTCATTTCATTTCCAGTATGGGACCAAGAAGAAACATaGCAAGGGATAGAGAAGACCTCTGTTCTCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: FISFPVWDQEET*QGIEKTSVLCF Trigger: GAAGCAGAGAACAGAGGTCTTCTCTATCCCTTGGCATGTTTCTTCTTGGTCCCATACTGGAAATGAAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR GCA 72 bp | GAAACATGCCAAGGGATAGAGAAGACCTCTGTTCTCTaGTTCACTTTAAAAATCACCATACAATCAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: ETCQGIEKTSVL*FTLKITIQSEC Trigger: ACATTCTGATTGTATGGTGATTTTTAAAGTGAAGCAGAGAACAGAGGTCTTCTCTATCCCTTGGCATGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR GCA 72 bp | TTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTaGCATCTGTACAGAAGACCAAAGAAAATCAGTCGA | + |
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Preference number: 3 (lower is better) Translates to: FLYGLQVSLFLI*HLYRRPKKISR Trigger: TCGACTGATTTTCTTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR CCA 72 bp | ATACAATCAGAATGTTCCCTCAAAGCTAACATCCTATaGGTGAAGCAGTACTTTCATATCTTCTTCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: IQSECSLKANIL*VKQYFHIFFKC Trigger: GCATTTGAAGAAGATATGAAAGTACTGCTTCACCCATAGGATGTTAGCTTTGAGGGAACATTCTGATTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR TCA 72 bp | CTCCTTTTCCTGATGGCAAGTCTTTCTCTCTTCTTCTaGTACCTTTTCTATCTTCTTCTGAACATATTAATT | + |
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Preference number: 3 (lower is better) Translates to: LLFLMASLSLFF*YLFYLLLNILI Trigger: AATTAATATGTTCAGAAGAAGATAGAAAAGGTATCAGAAGAAGAGAGAAAGACTTGCCATCAGGAAAAGGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | TTGTATTCTGCCACAGAGTGGGAGGGAGGGGAGATCATCTTAATCATCTGCGTTTTTTCCTCACTGGCCTaGATGGAGGGAAGGTCGGGA | + |
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Preference number: 4 (lower is better) Translates to: LYSATEWEGGEIILIICVFSSLA*MEGRSG Trigger: TCCCGACCTTCCCTCCATGCAGGCCAGTGAGGAAAA...AACGCAGATGATTAAGATGATCTCCCCTCCCTCCCACTCTGTGGCAGAATACAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR CAA 72 bp | GTCTCTGCTCCTTGTCACCGTTTCATGACCCTGAGGTaGACACTGTCTCTCTGCCATGCTGACATTCTAACC | + |
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Preference number: 4 (lower is better) Translates to: VSAPCHRFMTLR*TLSLCHADILT Trigger: GGTTAGAATGTCAGCATGGCAGAGAGACAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| 3UTR CAA 72 bp | GGAGGACTCTTGCAATGTATGTCATGTCTCTGCTCCTaGTCACCGTTTCATGACCCTGAGGTTGACACTGTC | + |
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Preference number: 4 (lower is better) Translates to: GGLLQCMSCLCS*SPFHDPEVDTV Trigger: GACAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATACATTGCAAGAGTCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTGAGGTTGACACTGATTGTTTTTCCTCACTaGCCTGCATGGAGGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VCHVSAPCHRFMTLRLTLIVFPH*PAWREG Trigger: ACCTTCCCTCCATGCAGGCCAGTGAGGAAAAACAAT...CAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GGACTCTTGCAATGTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTTTATCTTCCTTTGGTTaGCATCCCGATGGTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GLLQCMSCLCSLSPFHDPLSSFG*HPDGAS Trigger: AGAGGCACCATCGGGATGCCAACCAAAGGAAGATAA...AGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATACATTGCAAGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTGAGGTTGACACTGACAATTGACTGTCTGTaGCTCCACCTTGAAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: VCHVSAPCHRFMTLRLTLTIDCL*LHLEGS Trigger: AGATCCTTCAAGGTGGAGCCACAGACAGTCAATTGT...CAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | TTGTATTCTGCCACAGAGTGGGAGGGAGGGGAGATCATCTTAATCATCTGCGTTCCCAAATGTTGTGCCTaGTTTCTGACAACTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LYSATEWEGGEIILIICVPKCCA*FLTTLS Trigger: ACTCAGAGTTGTCAGAAAGCAGGCACAACATTTGGG...AACGCAGATGATTAAGATGATCTCCCCTCCCTCCCACTCTGTGGCAGAATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR TCA 90 bp | ACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAGAAAATCAGCACAGCTCTCGCCATTaGGCTGAGGGAGGGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: TSKSLSHLPSVQKTKENQHSSRH*AEGGLY Trigger: ATACAGCCCTCCCTCAGCTCAATGGCGAGAGCTGTG...CTGATTTTCTTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | GGACTCTTGCAATGTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTACTTCAGAAATCTCGTaGTCGGCCTTTTCCTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: GLLQCMSCLCSLSPFHDPTSEIS*SAFSLV Trigger: AACTAAGGAAAAGGCCGAGCACGAGATTTCTGAAGT...AGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATACATTGCAAGAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTGAGGTTGACACTGATTTTTGTGATGGTTTaGAGGAAAAAGCAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCHVSAPCHRFMTLRLTLIFVMV*RKKQQL Trigger: CAGCTGCTGCTTTTTCCTCCAAACCATCACAAAAAT...CAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR TCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAATCCCGATGGTGCCTCTaGGATGCATGGATCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKSRWCL*DAWISR Trigger: TCTACTGATCCATGCATCTCAGAGGCACCATCGGGA...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGAGCGCGACCAGACGGTaGTGGATTGCTGCATACAGA | + |
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Preference number: 4 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKSATRR*WIAAYR Trigger: TCTGTATGCAGCAATCCACCACCGTCTGGTCGCGCT...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAACGGGCCCAAATGTTGTaGCTGCTTTCTGACAACTCT | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKRAQML*LLSDNS Trigger: AGAGTTGTCAGAAAGCAGGCACAACATTTGGGCCCG...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGGCGACCAGACGGTGGTaGATTGCTGCATACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKATRRW*IAAYRK Trigger: CTTTCTGTATGCAGCAATCCACCACCGTCTGGTCGC...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAGAACTGGTGAACAGGTaGCTGTCGTCTTTCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKELVNR*LSSFLC Trigger: ACAAAGGAAAGACGACAGCCACCTGTTCACCAGTTC...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAAGTCGCAAAATCCCTTaGCCTCTTTCACTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKSRKIP*PLSLQD Trigger: ATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCGACT...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | ACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAGAAAATCAGTATTTTTCTTGCTGTTaGCGATCCTCCTGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSKSLSHLPSVQKTKENQYFSCC*RSSCTC Trigger: GCAGGTGCAGGAGGATCGGCAACAGCAAGAAAAATA...CTGATTTTCTTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAGGATCAGTAGACAGCTaGATTGAGCTTCTGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKGSVDS*IELLAF Trigger: AAATGCCAGAAGCTCAATCCAGCTGTCTACTGATCC...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | ACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAGAAAATCAGATGACATATTTTTCTTaGTGTTGCCGATCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSKSLSHLPSVQKTKENQMTYFS*CCRSSC Trigger: GCAGGAGGATCGGCAACAGCAAGAAAAATATGTCAT...CTGATTTTCTTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGTTCCAGGCTGTCTTCTaGAGGTCTCTTAAAATTGTG | + |
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Preference number: 4 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKFQAVF*RSLKIV Trigger: CACAATTTTAAGAGACCTGCAGAAGACAGCCTGGAA...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGATGTCATCACTCCTTTaGAGCAGACGTGATGTCATA | + |
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Preference number: 4 (lower is better) Translates to: ISVWVTSKSLSHLPSVQKMSSLL*SRRDVI Trigger: TATGACATCACGTCTGCTGCAAAGGAGTGATGACAT...CTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATACAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR GCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAATTTTTAGTGACTTGTaGGATCTCATCCTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKIFSDL*DLILIL Trigger: GAGGATGAGGATGAGATCGCACAAGTCACTAAAAAT...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR TCA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAATTCTGTGGCTTTGTTaGATACAAAGATCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKILWLC*IQRSCS Trigger: ACTGCAAGATCTTTGTATTCAACAAAGCCACAGAAT...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS TCA 90 bp | TGTGCGATCTCATCCTCATCCTCGTCACAGCTCTCGCCATTGAGCTaGGGGAGGGCTGTATCGGACTGGCTTTCGGCTGGACCACCGTCA | + |
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Preference number: 5 (lower is better) Translates to: CAISSSSSSQLSPLS*GRAVSDWLSAGPPS Trigger: TGACGGTGGTCCAGCCGAAAGCCAGTCCGATACAGCCCTCCCTCAGCTCAATGGCGAGAGCTGTGACGAGGATGAGGATGAGATCGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 90 bp | CCACCGTCACCCTGCTTAGCGAGGCTTCGAAGCGCGACCAGACGGTaGTGGATTGCTGCATACAGAAAGCCTGTATCTTTGGCACTAGCC | + |
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Preference number: 5 (lower is better) Translates to: PPSPCLARLRSATRR*WIAAYRKPVSLALA Trigger: GGCTAGTGCCAAAGATACAGGCTTTCTGTATGCAGCAATCCACCACCGTCTGGTCGCGCTTCGAAGCCTCGCTAAGCAGGGTGACGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 90 bp | GTTCCACACTCTCGGCCGGCCGTGTCGTTCAGTCGCAAAATCCCTTaGCCTCTTTCACTCCAGGATTCTGTGGCTTTGTTGAATACAAAG | + |
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Preference number: 5 (lower is better) Translates to: VPHSRPAVSFSRKIP*PLSLQDSVALLNTK Trigger: CTTTGTATTCAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCGACTGAACGACACGGCCGGCCGAGAGTGTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 90 bp | CTTAGTTTTGTAGGATTTCAATGCACCGGGCCCAAATGTTGTGCCTaGTTTCTGACAACTCTGAGTTTGAGACGGCTGCAGAACAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: LSFVGFQCTGPKCCA*FLTTLSLRRLQNSG Trigger: CCCGCTGTTCTGCAGCCGTCTCAAACTCAGAGTTGTCAGAAAGCAGGCACAACATTTGGGCCCGGTGCATTGAAATCCTACAAAACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CAA 90 bp | GTATGTCATGTCTCTGCTCCTTGTCACCGTTTCATGACCCTGAGGTTGACACTGCATTTTTGTGATGGTTaGGAGGAAAAAGCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VCHVSAPCHRFMTLRLTLHFCDG*EEKAAA Trigger: AGCTGCTGCTTTTTCCTCCAAACCATCACAAAAATG...CAGTGTCAACCTCAGGGTCATGAAACGGTGACAAGGAGCAGAGACATGACATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CAA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAACACCGGGCCCAAATGTaGTGCCTGCTTTCTGACAAC | + |
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Preference number: 5 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKHRAQM*CLLSDN Trigger: GTTGTCAGAAAGCAGGCACAACATTTGGGCCCGGTG...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CAA 90 bp | ACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAGAAAATCAGGTCTGTGGCTCCACCTaGAAGGATCTGATCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: TSKSLSHLPSVQKTKENQVCGST*KDLIHF Trigger: AAAATGGATCAGATCCTTCAAGGTGGAGCCACAGAC...CTGATTTTCTTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CAA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAAAATGACATATTTTTCTaGCTGTTGCCGATCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKNDIFF*LLPILL Trigger: CAGGAGGATCGGCAACAGCAAGAAAAATATGTCATT...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CAA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAATTTCTGACTTGCTCTTaGAATCTTCATCTGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKFLTCS*NLHLSP Trigger: TGGGCTCAGATGAAGATTCAAAGAGCAAGTCAGAAA...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS-3UTR CAA 90 bp | GTATGGGTTACAAGTAAGTCTCTTTCTCATTTGCCATCTGTACAGAAGACCAAATCCATTTTTAGTGACTaGTGCGATCTCATCCTCATC | + |
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Preference number: 5 (lower is better) Translates to: VWVTSKSLSHLPSVQKTKSIFSD*CDLILI Trigger: GATGAGGATGAGATCGCACAAGTCACTAAAAATGGA...TTTGGTCTTCTGTACAGATGGCAAATGAGAAAGAGACTTACTTGTAACCCATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS TCA 72 bp | CGATCTCATCCTCATCCTCGTCACAGCTCTCGCCATTaGGCTGAGGGAGGGCTGTATCGGACTGGCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSHPHPRHSSRH*AEGGLYRTGFR Trigger: CCGAAAGCCAGTCCGATACAGCCCTCCCTCAGCTCAATGGCGAGAGCTGTGACGAGGATGAGGATGAGATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS TCA 72 bp | TGGCCTGCATGGAGGGAAGGTCGGGACATCAGTGAATaGCGAGGACCTCAGACGCGTTTGAGACAAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: WPAWREGRDISE*RGPQTRLRQSC Trigger: GCAACTTTGTCTCAAACGCGTCTGAGGTCCTCGTCATTCACTGATGTCCCGACCTTCCCTCCATGCAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS TCA 72 bp | TCACTGGCCTGCATGGAGGGAAGGTCGGGACATCAGTaGATGACGAGGACCTCAGACGCGTTTGAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLACMEGRSGHQ*MTRTSDAFETK Trigger: CTTTGTCTCAAACGCGTCTGAGGTCCTCGTCATTCACTGATGTCCCGACCTTCCCTCCATGCAGGCCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | GAGGCTTCGAAGCGCGACCAGACGGTGGTGGATTGCTaGATACAGAAAGCCTGTATCTTTGGCACTAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: EASKRDQTVVDC*IQKACIFGTSL Trigger: CAGGCTAGTGCCAAAGATACAGGCTTTCTGTATGCAGCAATCCACCACCGTCTGGTCGCGCTTCGAAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | AGCGAGGCTTCGAAGCGCGACCAGACGGTGGTGGATTaGTGCATACAGAAAGCCTGTATCTTTGGCACTAGC | + |
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Preference number: 6 (lower is better) Translates to: SEASKRDQTVVD*CIQKACIFGTS Trigger: GCTAGTGCCAAAGATACAGGCTTTCTGTATGCAGCAATCCACCACCGTCTGGTCGCGCTTCGAAGCCTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 72 bp | TCTCGGCCGGCCGTGTCGTTCAGTCGCAAAATCCCTTaGCCTCTTTCACTCCAGGATTCTGTGGCTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRPAVSFSRKIP*PLSLQDSVALL Trigger: CAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCGACTGAACGACACGGCCGGCCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 72 bp | CCCTGCTTAGCGAGGCTTCGAAGCGCGACCAGACGGTaGTGGATTGCTGCATACAGAAAGCCTGTATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PCLARLRSATRR*WIAAYRKPVSL Trigger: CAAAGATACAGGCTTTCTGTATGCAGCAATCCACCACCGTCTGGTCGCGCTTCGAAGCCTCGCTAAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 72 bp | CTCTCGGCCGGCCGTGTCGTTCAGTCGCAAAATCCCTaGGCCTCTTTCACTCCAGGATTCTGTGGCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LSAGRVVQSQNP*ASFTPGFCGFV Trigger: AACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCGACTGAACGACACGGCCGGCCGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 72 bp | TGCTTAGCGAGGCTTCGAAGCGCGACCAGACGGTGGTaGATTGCTGCATACAGAAAGCCTGTATCTTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: CLARLRSATRRW*IAAYRKPVSLA Trigger: TGCCAAAGATACAGGCTTTCTGTATGCAGCAATCCACCACCGTCTGGTCGCGCTTCGAAGCCTCGCTAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 72 bp | CAGAGTCTGCTGTTGAGGACCAGCCTCAGACTGCCTTaGTTGCGCATGATTAGTCTTGACTGCAGTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QSLLLRTSLRLP*LRMISLDCSVP Trigger: TGGAACACTGCAGTCAAGACTAATCATGCGCAACCAAGGCAGTCTGAGGCTGGTCCTCAACAGCAGACTCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 72 bp | AGTCTGCTGTTGAGGACCAGCCTCAGACTGCCTTGGTaGCGCATGATTAGTCTTGACTGCAGTGTTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: SLLLRTSLRLPW*RMISLDCSVPH Trigger: GTGTGGAACACTGCAGTCAAGACTAATCATGCGCAACCAAGGCAGTCTGAGGCTGGTCCTCAACAGCAGACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 90 bp | TGTTCCACACTCTCGGCCGGCCGTGTCGTTCAGTCGCAAAATCCCTaGGCCTCTTTCACTCCAGGATTCTGTGGCTTTGTTGAATACAAA | + |
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Preference number: 6 (lower is better) Translates to: CSTLSAGRVVQSQNP*ASFTPGFCGFVEYK Trigger: TTTGTATTCAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCGACTGAACGACACGGCCGGCCGAGAGTGTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | GTAGGATTTCAATGCACCGGGCCCAAATGTTGTGCCTaGTTTCTGACAACTCTGAGTTTGAGACGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VGFQCTGPKCCA*FLTTLSLRRLQ Trigger: CTGCAGCCGTCTCAAACTCAGAGTTGTCAGAAAGCAGGCACAACATTTGGGCCCGGTGCATTGAAATCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CCA 72 bp | GAACAGCGGGTCTTAGAACCTGTTCAGAAGATCTCATaGGGGGTCCTTGCTCTACGTTGTTCATGTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: EQRVLEPVQKIS*GVLALRCSCHH Trigger: GTGATGACATGAACAACGTAGAGCAAGGACCCCCCATGAGATCTTCTGAACAGGTTCTAAGACCCGCTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | TACACGCTTTCTCAAGAAACCAGTGAATTCAGGCTCTaGCGTTTCTTCCAGGCTGTCTTCTGCAGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: YTLSQETSEFRL*RFFQAVFCRSL Trigger: AAGAGACCTGCAGAAGACAGCCTGGAAGAAACGGCAGAGCCTGAATTCACTGGTTTCTTGAGAAAGCGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | GTGCTCGGCCTTTTCCTTAGTTTTGTAGGATTTCAATaGACCGGGCCCAAATGTTGTGCCTGCTTTCTGACA | + |
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Preference number: 6 (lower is better) Translates to: VLGLFLSFVGFQ*TGPKCCACFLT Trigger: TGTCAGAAAGCAGGCACAACATTTGGGCCCGGTGCATTGAAATCCTACAAAACTAAGGAAAAGGCCGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 90 bp | CTCAAAAACAAATATTGGCTGAGCAATGACATATTTTTCTTGCTGTaGCCGATCCTCCTGCACCTGCAGCTGACGCGTGCACGAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LKNKYWLSNDIFFLL*PILLHLQLTRARTG Trigger: ACCAGTTCGTGCACGCGTCAGCTGCAGGTGCAGGAGGATCGGCAACAGCAAGAAAAATATGTCATTGCTCAGCCAATATTTGTTTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 90 bp | TCCTTTCTCAAAAACAAATATTGGCTGAGCAATGACATATTTTTCTaGCTGTTGCCGATCCTCCTGCACCTGCAGCTGACGCGTGCACGA | + |
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Preference number: 6 (lower is better) Translates to: SFLKNKYWLSNDIFF*LLPILLHLQLTRAR Trigger: TCGTGCACGCGTCAGCTGCAGGTGCAGGAGGATCGGCAACAGCAAGAAAAATATGTCATTGCTCAGCCAATATTTGTTTTTGAGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | TTTTGTAGGATTTCAATGCACCGGGCCCAAATGTTGTaGCTGCTTTCTGACAACTCTGAGTTTGAGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: FCRISMHRAQML*LLSDNSEFETA Trigger: AGCCGTCTCAAACTCAGAGTTGTCAGAAAGCAGGCACAACATTTGGGCCCGGTGCATTGAAATCCTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | GAATTCAGGCTCTGCCGTTTCTTCCAGGCTGTCTTCTaGAGGTCTCTTAAAATTGTGTTCTCCTTTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: EFRLCRFFQAVF*RSLKIVFSFLK Trigger: TTTGAGAAAGGAGAACACAATTTTAAGAGACCTGCAGAAGACAGCCTGGAAGAAACGGCAGAGCCTGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 72 bp | AGTCGCAGTTATTCGCAAATTTTTCTGACTTGCTCTTaGAATCTTCATCTGAGCCCAGAGTCTGCTGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSYSQIFLTCS*NLHLSPESAVE Trigger: CTCAACAGCAGACTCTGGGCTCAGATGAAGATTCAAAGAGCAAGTCAGAAAAATTTGCGAATAACTGCGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS GCA 72 bp | GGTCCTTGCTCTACGTTGTTCATGTCATCACTCCTTTaGAGCAGACGTGATGTCATAAAAACATTGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GPCSTLFMSSLL*SRRDVIKTLFF Trigger: GAAAAACAATGTTTTTATGACATCACGTCTGCTGCAAAGGAGTGATGACATGAACAACGTAGAGCAAGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 72 bp | CCTTGGCCTCTTTCACTCCAGGATTCTGTGGCTTTGTaGAATACAAAGATCTTGCAGTTGATCTTTAACACA | + |
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Preference number: 6 (lower is better) Translates to: PWPLSLQDSVAL*NTKILQLIFNT Trigger: TGTGTTAAAGATCAACTGCAAGATCTTTGTATTCAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 72 bp | ATCCCTTGGCCTCTTTCACTCCAGGATTCTGTGGCTTaGTTGAATACAAAGATCTTGCAGTTGATCTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: IPWPLSLQDSVA*LNTKILQLIFN Trigger: GTTAAAGATCAACTGCAAGATCTTTGTATTCAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 72 bp | CTAAATCAGTCGCAGTTATTCGCAAATTTTTCTGACTaGCTCTTTGAATCTTCATCTGAGCCCAGAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LNQSQLFANFSD*LFESSSEPRVC Trigger: GCAGACTCTGGGCTCAGATGAAGATTCAAAGAGCAAGTCAGAAAAATTTGCGAATAACTGCGACTGATTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 90 bp | CGCAAAATCCCTTGGCCTCTTTCACTCCAGGATTCTGTGGCTTTGTaGAATACAAAGATCTTGCAGTTGATCTTTAACACATTATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RKIPWPLSLQDSVAL*NTKILQLIFNTLCS Trigger: TGAACATAATGTGTTAAAGATCAACTGCAAGATCTTTGTATTCAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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| CDS CAA 90 bp | AGTCGCAAAATCCCTTGGCCTCTTTCACTCCAGGATTCTGTGGCTTaGTTGAATACAAAGATCTTGCAGTTGATCTTTAACACATTATGT | + |
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Preference number: 6 (lower is better) Translates to: SRKIPWPLSLQDSVA*LNTKILQLIFNTLC Trigger: ACATAATGTGTTAAAGATCAACTGCAAGATCTTTGTATTCAACAAAGCCACAGAATCCTGGAGTGAAAGAGGCCAAGGGATTTTGCGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227191.3 |
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