RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RANBP17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040594

Ensembl transcript IDs: ENSMUST00000037522.14, ENSMUST00000102815.10, ENSMUST00000129179.8, ENSMUST00000147751.2, ENSMUST00000207401.2

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGTTAAGCGTGTGGAAGGCGGAGGGAGGGCGGAGGGCAGAAGGTaGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAGCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: VVKRVEGGGRAEGRR*QLNSAGWSEGRAAS
Trigger: GGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCTCCCTCCGCCTTCCACACGCTTAACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 90 bp AGCGTGTGGAAGGCGGAGGGAGGGCGGAGGGCAGAAGGTGGCAGCTaGACTCTGCTGGGTGGTCAGAAGGCAGAGCTGCTTCCAGATACA +
Preference number: 1 (lower is better)
Translates to: SVWKAEGGRRAEGGS*TLLGGQKAELLPDT
Trigger: TGTATCTGGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCTCCCTCCGCCTTCCACACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 90 bp GGAAGGCGGAGGGAGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTaGTGGGTGGTCAGAAGGCAGAGCTGCTTCCAGATACAACTTGCC +
Preference number: 1 (lower is better)
Translates to: GRRREGGGQKVAAEL*WVVRRQSCFQIQLA
Trigger: GGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCTCCCTCCGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 90 bp AGGCGGAGGGAGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTaGGTGGTCAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACC +
Preference number: 1 (lower is better)
Translates to: RRREGGGQKVAAELC*VVRRQSCFQIQLAT
Trigger: GGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCTCCCTCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 90 bp GGAGTGGAAGGTATGAGACACAGAAGCAGGAGTGACACACGGGAGTaGAGAAGGGAGCGAGGAGGCGCACAGGAGCGAGGACCGTGGGGA +
Preference number: 1 (lower is better)
Translates to: GVEGMRHRSRSDTRE*RRERGGAQERGPWG
Trigger: TCCCCACGGTCCTCGCTCCTGTGCGCCTCCTCGCTCCCTTCTTCACTCCCGTGTGTCACTCCTGCTTCTGTGTCTCATACCTTCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR GCA 90 bp CACGAGAAGGAGAAGCCGGCGACACCAGCGGATGAGGACTCCTTATaGTCTACAGACCACGGGAAGGAGAAGCTGGTGACCCCAGGGGCT +
Preference number: 1 (lower is better)
Translates to: HEKEKPATPADEDSL*STDHGKEKLVTPGA
Trigger: AGCCCCTGGGGTCACCAGCTTCTCCTTCCCGTGGTCTGTAGAGCATAAGGAGTCCTCATCCGCTGGTGTCGCCGGCTTCTCCTTCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 90 bp GTGCAGCCCGTACAGAAATGGGCTACGGCCGGAATTCAGCAGTCCTaGATCTCTCCTCAGGGGCCACAGAGGCACCGGTGCTTCCCTATC +
Preference number: 1 (lower is better)
Translates to: VQPVQKWATAGIQQS*ISPQGPQRHRCFPI
Trigger: GATAGGGAAGCACCGGTGCCTCTGTGGCCCCTGAGGAGAGATCCAGGACTGCTGAATTCCGGCCGTAGCCCATTTCTGTACGGGCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 90 bp GGAAGGAGGAAAAGGAGTGGAAGGTATGAGACACAGAAGCAGGAGTaGCACACGGGAGTGAAGAAGGGAGCGAGGAGGCGCACAGGAGCG +
Preference number: 1 (lower is better)
Translates to: GRRKRSGRYETQKQE*HTGVKKGARRRTGA
Trigger: CGCTCCTGTGCGCCTCCTCGCTCCCTTCTTCACTCCCGTGTGTCACTCCTGCTTCTGTGTCTCATACCTTCCACTCCTTTTCCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR GCA 90 bp GGAAGCATGTGCAGTGCTGTGGGAAGAGGGCAGCTACAACCACCCTaGCCACAAGCACACAAGCCAGGCATTGTGGCCGATGCCTATCAA +
Preference number: 1 (lower is better)
Translates to: GSMCSAVGRGQLQPP*PQAHKPGIVADAYQ
Trigger: TTGATAGGCATCGGCCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTCCCACAGCACTGCACATGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 90 bp TTGCTGAGGCAGAAAGGCCTGTGTGCAGTTCTGGGGGAGGCTTTATaGTGCTTCCTCCCAAGCTCCTTGTCAATGCCCACAGCCCCGAGT +
Preference number: 1 (lower is better)
Translates to: LLRQKGLCAVLGEAL*CFLPSSLSMPTAPS
Trigger: ACTCGGGGCTGTGGGCATTGACAAGGAGCTTGGGAGGAAGCACCATAAAGCCTCCCCCAGAACTGCACACAGGCCTTTCTGCCTCAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 90 bp CCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTaGAAATGTCACAGTGAGTTCCAGGCCAGCCTGGGCTACGTAGGG +
Preference number: 1 (lower is better)
Translates to: PGIVADAYQPSLRRL*KCHSEFQASLGYVG
Trigger: CCCTACGTAGCCCAGGCTGGCCTGGAACTCACTGTGACATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 90 bp ACACCTTTGATCCCAGCACTTAGGAGGCAGAGGCAGGAGGTTTTCTaGGTTCAAGGCCAGCCACGGCTGGTCTACAGAGTGAGTTCCAGG +
Preference number: 1 (lower is better)
Translates to: TPLIPALRRQRQEVF*VQGQPRLVYRVSSR
Trigger: CCTGGAACTCACTCTGTAGACCAGCCGTGGCTGGCCTTGAACTCAGAAAACCTCCTGCCTCTGCCTCCTAAGTGCTGGGATCAAAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 90 bp AAGCACACAAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTaGGGAGGCTGTGGAAATGTCACAGTGAGTTCCAGGCCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: KHTSQALWPMPINLH*GGCGNVTVSSRPAW
Trigger: CCAGGCTGGCCTGGAACTCACTGTGACATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTTGTGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 90 bp GCCTGTGGATTTTCCCCTGCAACAGTGAGGTCAGCCTTTCAGGTCTaGTCAGACATTATGGCCGCAGTGTTTATTGTAAGCCTGAACGCC +
Preference number: 1 (lower is better)
Translates to: ACGFSPATVRSAFQV*SDIMAAVFIVSLNA
Trigger: GGCGTTCAGGCTTACAATAAACACTGCGGCCATAATGTCTGATCAGACCTGAAAGGCTGACCTCACTGTTGCAGGGGAAAATCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 90 bp ACTCTGCTGGGTGGTCAGAAGGCAGAGCTGCTTCCAGATACAACTTaGCACCCTCAGCTTTCCTTCAAGTTAAATGGAGCTTGTGCACCT +
Preference number: 1 (lower is better)
Translates to: TLLGGQKAELLPDTT*HPQLSFKLNGACAP
Trigger: AGGTGCACAAGCTCCATTTAACTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 90 bp GAAATGAGATTACAGCAAGAGCCTGTGGATTTTCCCCTGCAACAGTaGGGTCAGCCTTTCAGGTCTGATCAGACATTATGGCCGCAGTGT +
Preference number: 1 (lower is better)
Translates to: EMRLQQEPVDFPLQQ*GQPFRSDQTLWPQC
Trigger: ACACTGCGGCCATAATGTCTGATCAGACCTGAAAGGCTGACCTCACTGTTGCAGGGGAAAATCCACAGGCTCTTGCTGTAATCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 90 bp TATCTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTaGCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGGAAACA +
Preference number: 1 (lower is better)
Translates to: YLANQFCHGQMNMGS*HTTVTRKSTNGQET
Trigger: TGTTTCCTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 90 bp GCTCCCTTTGCACACGGAAGACAGACACTTGGGCATGAACTTAGGTaGCTGGCTTTCATACGACAAGCTTGTTGCAAAACTCAACCATCA +
Preference number: 1 (lower is better)
Translates to: APFAHGRQTLGHELR*LAFIRQACCKTQPS
Trigger: TGATGGTTGAGTTTTGCAACAAGCTTGTCGTATGAAAGCCAGCCACCTAAGTTCATGCCCAAGTGTCTGTCTTCCGTGTGCAAAGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 90 bp ATACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAT +
Preference number: 1 (lower is better)
Translates to: IHPVKQHGVAGLCVQ*KGNPSKISCQPDQH
Trigger: ATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR TCA 90 bp CCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGGAAACACATaGGGAAGCGCAGCATCCTTGCAATCAGAGAAAGGTAAAGTTGCT +
Preference number: 1 (lower is better)
Translates to: PHNCHKEKHKWPGNT*GSAASLQSEKGKVA
Trigger: AGCAACTTTACCTTTCTCTGATTGCAAGGATGCTGCGCTTCCTCATGTGTTTCCTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR GCA 90 bp GCTGATTACACATTAGTTCATTTAGCTTTGTTTCCTCTTCCCTACTaGGCCACACTATTAAACGAAAGAGAGGGGCCTGGCATCCCTCTG +
Preference number: 1 (lower is better)
Translates to: ADYTLVHLALFPLPY*ATLLNEREGPGIPL
Trigger: CAGAGGGATGCCAGGCCCCTCTCTTTCGTTTAATAGTGTGGCGCAGTAGGGAAGAGGAAACAAAGCTAAATGAACTAATGTGTAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CCA 90 bp GACAACAATGAGAGAAACATAAAAGTAGTTTACCTCAAGACAGACTaGCCTCAAACTCAGAGATCCACCTGCCTCTGCTCCAGAGTGCTG +
Preference number: 1 (lower is better)
Translates to: DNNERNIKVVYLKTD*PQTQRSTCLCSRVL
Trigger: CAGCACTCTGGAGCAGAGGCAGGTGGATCTCTGAGTTTGAGGCCAGTCTGTCTTGAGGTAAACTACTTTTATGTTTCTCTCATTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 90 bp AGGTTTGATGGGTCACAAGCTGTAAAGGCCTTCATTTCCTATGTTTaGATGAAGTCACATCCAACAGTGGTTAAGCGTGTGGAAGGCGGA +
Preference number: 1 (lower is better)
Translates to: RFDGSQAVKAFISYV*MKSHPTVVKRVEGG
Trigger: TCCGCCTTCCACACGCTTAACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCTTGTGACCCATCAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 90 bp CCTTTGCACACGGAAGACAGACACTTGGGCATGAACTTAGGTGGCTaGCTTTCATACGACAAGCTTGTTGCAAAACTCAACCATCAAGAA +
Preference number: 1 (lower is better)
Translates to: PLHTEDRHLGMNLGG*LSYDKLVAKLNHQE
Trigger: TTCTTGATGGTTGAGTTTTGCAACAAGCTTGTCGTATGAAAGCCAGCCACCTAAGTTCATGCCCAAGTGTCTGTCTTCCGTGTGCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 90 bp GCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACGCTTTACTTCTTCCTGTTTAAAGTT +
Preference number: 1 (lower is better)
Translates to: AGLCVQCKGNPSKIS*QPDQHTLYFFLFKV
Trigger: AACTTTAAACAGGAAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR TCA 90 bp GCGCTCAGTTATCTGCACTGCTGCCACTGTGCTGTAATTTTTAGCTaGTTACACATTAGTTCATTTAGCTTTGTTTCCTCTTCCCTACTG +
Preference number: 1 (lower is better)
Translates to: ALSYLHCCHCAVIFS*LHISSFSFVSSSLL
Trigger: CAGTAGGGAAGAGGAAACAAAGCTAAATGAACTAATGTGTAATCAGCTAAAAATTACAGCACAGTGGCAGCAGTGCAGATAACTGAGCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CCA 90 bp TACTTCAGGTTTGTAACAATTTTCGTCATGAATGTTTCCAGAACATaGTTATCATCTGTTATTCCTAAGACTTCTGACATACGAGCATAC +
Preference number: 1 (lower is better)
Translates to: YFRFVTIFVMNVSRT*LSSVIPKTSDIRAY
Trigger: GTATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATGATAACCATGTTCTGGAAACATTCATGACGAAAATTGTTACAAACCTGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR GCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGCAAGCTCCTTGTCAATaGCCACAGCCCCGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWQAPCQ*PQPRVP
Trigger: AGGGACTCGGGGCTGTGGGCATTGACAAGGAGCTTG...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAGCCAGCATCGTAGTCTaGAACCCAGACCTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRASIVV*NPDLPD
Trigger: ATCTGGAAGGTCTGGGTTCCAGACTACGATGCTGGC...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGCAGCTACAACCACCCTaGCCACAAGCACACAAGCCA +
Preference number: 2 (lower is better)
Translates to: ICERRCWSGEACAVLWEEQLQPP*PQAHKP
Trigger: TGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTG...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR TCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGCCTTCCAGATTCTCTTaGCAAAGGCTGCACAGCCCA +
Preference number: 2 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWPSRFS*QRLHSP
Trigger: TGGGCTGTGCAGCCTTTGTCAAGAGAATCTGGAAGG...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGACTTCCAGATACAACTTaGCACCCTCAGCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRLPDTT*HPQLSF
Trigger: GAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAG...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGCTGTGGATTTTCCCCTaGAACAGTGAGGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: ICERRCWSGEACAVLWEELWIFP*NSEVSL
Trigger: AAGGCTGACCTCACTGTTGCAGGGGAAAATCCACAG...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAAAAAATACACTCTTCTaGGCTGGCCAGCATCGTAGT +
Preference number: 2 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRKNTLF*AGQHRS
Trigger: ACTACGATGCTGGCCAGCCCAGAAGAGTGTATTTTT...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CCA 90 bp TATTATCTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACCAGGAGCGAGGACCGTaGGGAAGAGGGATGGGAATG +
Preference number: 2 (lower is better)
Translates to: YYLANQFCHGQMNMGSCHQERGP*GRGMGM
Trigger: CATTCCCATCCCTCTTCCCCACGGTCCTCGCTCCTG...GTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CCA 90 bp CTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAACTGGAATTCAGCAGTCCTaGATCTCTCCTCAGGGGCCA +
Preference number: 2 (lower is better)
Translates to: LANQFCHGQMNMGSCHTTGIQQS*ISPQGP
Trigger: TGGCCCCTGAGGAGAGATCCAGGACTGCTGAATTCC...AGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGTCACTGAGGAGGCTGTaGAAATGTCACAGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWSLRRL*KCHSEF
Trigger: GAACTCACTGTGACATTTCCACAGCCTCCTCAGTGA...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR TCA 90 bp CTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAACTACACAGAAGCAGGAGTaGCACACGGGAGTGAAGAAG +
Preference number: 2 (lower is better)
Translates to: LANQFCHGQMNMGSCHTTTQKQE*HTGVKK
Trigger: CTTCTTCACTCCCGTGTGTCACTCCTGCTTCTGTGT...AGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR TCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGTTTATCAGATATTGCTaGGGCAGAAAGGCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWFIRYC*GRKACV
Trigger: CACACAGGCCTTTCTGCCTCAGCAATATCTGATAAA...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR TCA 90 bp GGCTGTGTAGAAGGTTGTCCGGCACCTGAAGTCACCCACATTGTAAGTTTCACTTGGACCCTTAGACTGTaGTCCCTGGGTCAGGTGATG +
Preference number: 2 (lower is better)
Translates to: GCVEGCPAPEVTHIVSFTWTLRL*SLGQVM
Trigger: CATCACCTGACCCAGGGATCACAGTCTAAGGGTCCA...AGTGAAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR GCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGCTAAACACATCTCTCTaGAGGCAGCAATTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMLNTSL*RQQLQS
Trigger: GCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAG...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACCCTGGCATCCCTCTGTaGACAGAGCTGGTATTGTCA +
Preference number: 2 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHPGIPL*TELVLS
Trigger: TGACAATACCAGCTCTGTGCACAGAGGGATGCCAGG...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CAA 90 bp AACTCTGCTGGGTGGTCAGAAGGCAGAGCTGCTTCCAGATACAACTaGCCACCCTCAGCTTTCCTTCAAGTTAAATGGAGCTTGTGCACC +
Preference number: 2 (lower is better)
Translates to: NSAGWSEGRAASRYN*PPSAFLQVKWSLCT
Trigger: GGTGCACAAGCTCCATTTAACTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR TCA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCACCATCAAGAAAGGTTTaGAGAAACACTAGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSPSRKV*RNTSLR
Trigger: TCTCAGACTAGTGTTTCTTCAAACCTTTCTTGATGG...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp TATTATCTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAGACCTGTGGCTATaGCAGGGAAGCCCATTGTTT +
Preference number: 2 (lower is better)
Translates to: YYLANQFCHGQMNMGSCHTDLWL*QGSPLF
Trigger: AAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGT...GTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CCA 90 bp CACACTATTAAACGAAAGAGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: HTIKRKRGAWHPSVHRAGTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...ACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCTCTTTCGTTTAATAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CAA 90 bp TTATCTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTaGCCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: LSRQSVLPWADEHGQ*PHNCHKEKHKWPGN
Trigger: GTTTCCTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CAA 90 bp AACGAAAGAGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTATaGTCACAGTGTAATAAGGATACATCCAGTCAAACAGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: NEREGPGIPLCTELV*SQCNKDTSSQTAWC
Trigger: ACACCATGCTGTTTGACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCTCTTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR CCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTGCAGCTGAACTCTGCTaGGTGGTCAGAAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGAAELC*VVRRQS
Trigger: GCTCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGC...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp TATTATCTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACGAAGCGCAGCATCCTTaGAATCAGAGAAAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: YYLANQFCHGQMNMGSCHEAQHP*NQRKVK
Trigger: CTTTACCTTTCTCTGATTGCAAGGATGCTGCGCTTC...GTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR GCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGATACGACAAGCTTGTTaGAAAACTCAACCATCAAGA +
Preference number: 2 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMIRQAC*KTQPSR
Trigger: TCTTGATGGTTGAGTTTTGCAACAAGCTTGTCGTAT...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGTCACAGGCACTAGCCTaGTTTACTATGTTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKSQALA*FTMFFG
Trigger: ACCAAAGAACATAGTAAACCAGGCTAGTGCCTGTGA...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR GCA 90 bp GGCAGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCAGCAGAAAGGCCTGTGTaGAGTTCTGGGGGAGGCTTT +
Preference number: 2 (lower is better)
Translates to: GSNCRANSSRLNHFRFMPAERPV*SSGGGF
Trigger: AAAGCCTCCCCCAGAACTGCACACAGGCCTTTCTGC...TGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CCA 90 bp TGTGAGAGGCAGCATAAAATTCTCAAATTCATCCTCATCTTCACCCAGGTCTACAGGAAGAACCCCAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: CERQHKILKFILIFTQVYRKNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTGGGGTTCTTCCT...GTAGACCTGGGTGAAGATGAGGATGAATTTGAGAATTTTATGCTGCCTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR GCA 90 bp TGCACAGAGCTGGTATTGTCACAGTGTAATAAGGATACATCCAGTCAAACAGCAGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: CTELVLSQCNKDTSSQTAGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...TGCTGTTTGACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR CCA 90 bp GCCTGTTGCCATGGCTTGGAAATGCCACCAGCCTACATGATCATCGACAAACATTGTGGGTGTTGTACATaGCATAAAACATATGACACA +
Preference number: 2 (lower is better)
Translates to: ACCHGLEMPPAYMIIDKHCGCCT*HKTYDT
Trigger: TGTGTCATATGTTTTATGCCATGTACAACACCCACA...ATGTTTGTCGATGATCATGTAGGCTGGTGGCATTTCCAAGCCATGGCAACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR TCA 90 bp ATGAACATGGGCAGTTGCCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGTCCCTGCTAACTATCTaGAGGTATTTAAAGGAATGT +
Preference number: 2 (lower is better)
Translates to: MNMGSCHTTVTRKSTNGQSLLTI*RYLKEC
Trigger: ACATTCCTTTAAATACCTTCAGATAGTTAGCAGGGA...CTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CCA 90 bp GAATTCTTGTCAAGCTCCTTGAAAGCTGATGTTTCTAAGTACAGGATTTGTCTCAGTCACATCCAACAGTaGTTAAGCGTGTGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: EFLSSSLKADVSKYRICLSHIQQ*LSVWKA
Trigger: CGCCTTCCACACGCTTAACCACTGTTGGATGTGACT...GAGACAAATCCTGTACTTAGAAACATCAGCTTTCAAGGAGCTTGACAAGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR TCA 90 bp GCTAGGGTACTGGATTGTCTCCTTTGCTGGATGATGACATCAAGTGTCCAAGAAGTAATTGAAGTGCTGTaGTTTCAAACCTATTCTGTC +
Preference number: 2 (lower is better)
Translates to: ARVLDCLLCWMMTSSVQEVIEVL*FQTYSV
Trigger: GACAGAATAGGTTTGAAATCACAGCACTTCAATTAC...TTCTTGGACACTTGATGTCATCATCCAGCAAAGGAGACAATCCAGTACCCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR CCA 90 bp GTTTATTGGTCACTGGGTAAGTGTCAGACACCAGACAGAGTGTGTTACTTATCTGATTGTCTCCTTTGCTaGATGATGACATCAAGTGTC +
Preference number: 2 (lower is better)
Translates to: VYWSLGKCQTPDRVCYLSDCLLC*MMTSSV
Trigger: GACACTTGATGTCATCATCCAGCAAAGGAGACAATC...AGATAAGTAACACACTCTGTCTGGTGTCTGACACTTACCCAGTGACCAATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR TCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTTTTAGCTGCTTGTTCTaGAAAATACACTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGFSCLF*KIHSSG
Trigger: CCCAGAAGAGTGTATTTTTCAGAACAAGCAGCTAAA...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR TCA 90 bp TGTTTCAAAAGAGACTGTGAGAGGCAGCATAAAATTCTCAAATTCATCCTCATCAAGGATATAGCCAACTaGCAGGTCACTGAGGAACTG +
Preference number: 2 (lower is better)
Translates to: CFKRDCERQHKILKFILIKDIAN*QVTEEL
Trigger: CAGTTCCTCAGTGACCTGTCAGTTGGCTATATCCTT...GATGAGGATGAATTTGAGAATTTTATGCTGCCTCTCACAGTCTCTTTTGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR TCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTACTATGTTCTTTGGTTaGATACAGTTTCTAGACCCT +
Preference number: 2 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGTMFFG*IQFLDP
Trigger: AGGGTCTAGAAACTGTATTCAACCAAAGAACATAGT...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 90 bp GCCAGCCCGATCAACATACGCTTTACTTCTTCCTGTTTAAAGTTATaGTTGAATATTTGTAACACTGTTTCAAAAGAGACTGTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: ASPINIRFTSSCLKL*LNICNTVSKETVRG
Trigger: GCCTCTCACAGTCTCTTTTGAAACAGTGTTACAAATATTCAACAATAACTTTAAACAGGAAGAAGTAAAGCGTATGTTGATCGGGCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CCA 72 bp CGTGTGGAAGGCGGAGGGAGGGCGGAGGGCAGAAGGTaGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: RVEGGGRAEGRR*QLNSAGWSEGR
Trigger: TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCTCCCTCCGCCTTCCACACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 72 bp AGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTaGGAAGAGGGCAGCTACAACCACCCTGCCCACAAG +
Preference number: 3 (lower is better)
Translates to: RRCWSGEACAVL*EEGSYNHPAHK
Trigger: CTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 72 bp GTACAGAAATGGGCTACGGCCGGAATTCAGCAGTCCTaGATCTCTCCTCAGGGGCCACAGAGGCACCGGTGC +
Preference number: 3 (lower is better)
Translates to: VQKWATAGIQQS*ISPQGPQRHRC
Trigger: GCACCGGTGCCTCTGTGGCCCCTGAGGAGAGATCCAGGACTGCTGAATTCCGGCCGTAGCCCATTTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 72 bp GGTATGAGACACAGAAGCAGGAGTGACACACGGGAGTaGAGAAGGGAGCGAGGAGGCGCACAGGAGCGAGGA +
Preference number: 3 (lower is better)
Translates to: GMRHRSRSDTRE*RRERGGAQERG
Trigger: TCCTCGCTCCTGTGCGCCTCCTCGCTCCCTTCTTCACTCCCGTGTGTCACTCCTGCTTCTGTGTCTCATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CAA 90 bp ATGAACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCGGCTGGCACACACCTTaGATCCCAGCACTTAGGAGG +
Preference number: 3 (lower is better)
Translates to: MNESRAEQHRPVAMPGKPGWHTP*IPALRR
Trigger: CCTCCTAAGTGCTGGGATCAAAGGTGTGTGCCAGCC...GGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CAA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGCACACAAGCCAGGCATaGTGGCCGATGCCTATCAAC +
Preference number: 3 (lower is better)
Translates to: ICERRCWSGEACAVLWEEHTSQA*WPMPIN
Trigger: GTTGATAGGCATCGGCCACAATGCCTGGCTTGTGTG...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp CCTTATGCTCTACAGACCACGGGAAGGAGAAGCTGGTaGCCCCAGGGGCTGCGGATGAGGACTTCCTATGCT +
Preference number: 3 (lower is better)
Translates to: PYALQTTGRRSW*PQGLRMRTSYA
Trigger: AGCATAGGAAGTCCTCATCCGCAGCCCCTGGGGTCACCAGCTTCTCCTTCCCGTGGTCTGTAGAGCATAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR GCA 72 bp GCCACAGAGGCACCGGTGCTTCCCTATCTAGTGCTGTaGCTGTTGCCATGGCTTGGAAATGCCACCAGCCTA +
Preference number: 3 (lower is better)
Translates to: ATEAPVLPYLVL*LLPWLGNATSL
Trigger: TAGGCTGGTGGCATTTCCAAGCCATGGCAACAGGCACAGCACTAGATAGGGAAGCACCGGTGCCTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 72 bp GTGCTGTTGACTAGAGGCATCTGTGAGAGACGGTGCTaGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: VLLTRGICERRC*SGEACAVLWEE
Trigger: CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGATGCCTCTAGTCAACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp AAAGGCCTGTGTGCAGTTCTGGGGGAGGCTTTATGGTaGTTCCTCCCAAGCTCCTTGTCAATGCCCACAGCC +
Preference number: 3 (lower is better)
Translates to: KGLCAVLGEALW*FLPSSLSMPTA
Trigger: GGCTGTGGGCATTGACAAGGAGCTTGGGAGGAAGCACCATAAAGCCTCCCCCAGAACTGCACACAGGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CAA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAGAACTTTATCAGATATaGCTGAGGCAGAAAGGCCTG +
Preference number: 3 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRELYQI*LRQKGL
Trigger: CAGGCCTTTCTGCCTCAGCAATATCTGATAAAGTTC...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp AAAAGGAGTGGAAGGTATGAGACACAGAAGCAGGAGTaGCACACGGGAGTGAAGAAGGGAGCGAGGAGGCGC +
Preference number: 3 (lower is better)
Translates to: KRSGRYETQKQE*HTGVKKGARRR
Trigger: GCGCCTCCTCGCTCCCTTCTTCACTCCCGTGTGTCACTCCTGCTTCTGTGTCTCATACCTTCCACTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 72 bp GATGGCATCTGTCTCGACCCAGAACCCACACTGAAGTaGGGGCTGCATCTTCACCAAATCCACAGCCGTGGT +
Preference number: 3 (lower is better)
Translates to: DGICLDPEPTLK*GLHLHQIHSRG
Trigger: ACCACGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCGAGACAGATGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp GCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAGCTaGTTCCAGATACAACTTGCCACCCTCAGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: AAELCWVVRRQS*FQIQLATLSFP
Trigger: AGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp CTGCCCACAAGCACACAAGCCAGGCATTGTGGCCGATaGCTATCAACCTTCACTGAGGAGGCTGTGGAAATG +
Preference number: 3 (lower is better)
Translates to: LPTSTQARHCGR*LSTFTEEAVEM
Trigger: CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTTGTGTGCTTGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 72 bp CAGAAAGGCCTGTGTGCAGTTCTGGGGGAGGCTTTATaGTGCTTCCTCCCAAGCTCCTTGTCAATGCCCACA +
Preference number: 3 (lower is better)
Translates to: QKGLCAVLGEAL*CFLPSSLSMPT
Trigger: TGTGGGCATTGACAAGGAGCTTGGGAGGAAGCACCATAAAGCCTCCCCCAGAACTGCACACAGGCCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp GTTCAGATGGCATCTGTCTCGACCCAGAACCCACACTaGAGTGAGGGCTGCATCTTCACCAAATCCACAGCC +
Preference number: 3 (lower is better)
Translates to: VQMASVSTQNPH*SEGCIFTKSTA
Trigger: GGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp AGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTaGGGAGGCTGTGGAAATGTCACAGTGAGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SQALWPMPINLH*GGCGNVTVSSR
Trigger: CCTGGAACTCACTGTGACATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp CAAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTaGGCTCAGTTATCTGCACTGCTGCCACTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: QESDLCEPGLKC*AQLSALLPLCC
Trigger: ACAGCACAGTGGCAGCAGTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CCA 72 bp CCGGTGCTTCCCTATCTAGTGCTGTGCCTGTTGCCATaGCTTGGAAATGCCACCAGCCTACATGATCATCGA +
Preference number: 3 (lower is better)
Translates to: PVLPYLVLCLLP*LGNATSLHDHR
Trigger: TCGATGATCATGTAGGCTGGTGGCATTTCCAAGCCATGGCAACAGGCACAGCACTAGATAGGGAAGCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CAA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAAACGGAAGACAGACACTaGGGCATGAACTTAGGTGGC +
Preference number: 3 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKTEDRH*GMNLGG
Trigger: GCCACCTAAGTTCATGCCCAAGTGTCTGTCTTCCGT...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp AACAAAGGACAACATGAACGGGAAAGGGCAGGCATTTaGAGCTGTTGCGGATGTAACCCTGTGCAGCCCGTA +
Preference number: 3 (lower is better)
Translates to: NKGQHERERAGI*SCCGCNPVQPV
Trigger: TACGGGCTGCACAGGGTTACATCCGCAACAGCTGCAAATGCCTGCCCTTTCCCGTTCATGTTGTCCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR-3UTR CAA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCACATACGACAAGCTTGTaGCAAAACTCAACCATCAAG +
Preference number: 3 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSHTTSL*QNSTIK
Trigger: CTTGATGGTTGAGTTTTGCAACAAGCTTGTCGTATG...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp GTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: VKQHGVAGLCVQ*KGNPSKISCQP
Trigger: GGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR CAA 90 bp CTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAACTGTCCATGATGAGTTGTaGCCTGTGTGTCCCATAAAA +
Preference number: 3 (lower is better)
Translates to: LANQFCHGQMNMGSCHTTVHDEL*PVCPIK
Trigger: TTTTATGGGACACACAGGCAACAACTCATCATGGAC...AGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 72 bp AAAATACACTCTTCTGGGCTGGCCAGCATCGTAGTCTaGAACCCAGACCTTCCAGATTCTCTTGACAAAGGC +
Preference number: 3 (lower is better)
Translates to: KIHSSGLASIVV*NPDLPDSLDKG
Trigger: GCCTTTGTCAAGAGAATCTGGAAGGTCTGGGTTCCAGACTACGATGCTGGCCAGCCCAGAAGAGTGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 72 bp GAAGTGAGGGCTGCATCTTCACCAAATCCACAGCCGTaGTCACAGGCACTAGCCTGGTTTACTATGTTCTTT +
Preference number: 3 (lower is better)
Translates to: EVRAASSPNPQP*SQALAWFTMFF
Trigger: AAAGAACATAGTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 72 bp AAAGAGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTaGTATTGTCACAGTGTAATAAGGATACATCCAGTC +
Preference number: 3 (lower is better)
Translates to: KERGLASLCAQS*YCHSVIRIHPV
Trigger: GACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR TCA 72 bp TTGACAATGACTAGGATGAGACAACAAAGGACAACATaGACGGGAAAGGGCAGGCATTTGCAGCTGTTGCGG +
Preference number: 3 (lower is better)
Translates to: LTMTRMRQQRTT*TGKGRHLQLLR
Trigger: CCGCAACAGCTGCAAATGCCTGCCCTTTCCCGTTCATGTTGTCCTTTGTTGTCTCATCCTAGTCATTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR GCA 72 bp AATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTaGCACACAACTGTCACAAGGAAAAGCACAAATGGC +
Preference number: 3 (lower is better)
Translates to: NQFCHGQMNMGS*HTTVTRKSTNG
Trigger: GCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR GCA 72 bp TGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACGCTTTACTTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: CVQCKGNPSKIS*QPDQHTLYFFL
Trigger: CAGGAAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CCA 72 bp GCACACGGAAGACAGACACTTGGGCATGAACTTAGGTaGCTGGCTTTCATACGACAAGCTTGTTGCAAAACT +
Preference number: 3 (lower is better)
Translates to: AHGRQTLGHELR*LAFIRQACCKT
Trigger: AGTTTTGCAACAAGCTTGTCGTATGAAAGCCAGCCACCTAAGTTCATGCCCAAGTGTCTGTCTTCCGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp CCTGTTGCCATGGCTTGGAAATGCCACCAGCCTACATaGTCATCGACAAACATAAGAAAAGAGTGCCCACAT +
Preference number: 3 (lower is better)
Translates to: PVAMAWKCHQPT*SSTNIRKECPH
Trigger: ATGTGGGCACTCTTTTCTTATGTTTGTCGATGATCATGTAGGCTGGTGGCATTTCCAAGCCATGGCAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 72 bp ATTATTATCTCGCCAATCAGTTCTGCCATGGGCAGATaGACATGGGCAGTTGCCACACAACTGTCACAAGGA +
Preference number: 3 (lower is better)
Translates to: IIISPISSAMGR*TWAVATQLSQG
Trigger: TCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 72 bp TTTTCCCCTGCAACAGTGAGGTCAGCCTTTCAGGTCTaGTCAGACATTATGGCCGCAGTGTTTATTGTAAGC +
Preference number: 3 (lower is better)
Translates to: FSPATVRSAFQV*SDIMAAVFIVS
Trigger: GCTTACAATAAACACTGCGGCCATAATGTCTGATCAGACCTGAAAGGCTGACCTCACTGTTGCAGGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CCA 72 bp GAGAGAAACATAAAAGTAGTTTACCTCAAGACAGACTaGCCTCAAACTCAGAGATCCACCTGCCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: ERNIKVVYLKTD*PQTQRSTCLCS
Trigger: GGAGCAGAGGCAGGTGGATCTCTGAGTTTGAGGCCAGTCTGTCTTGAGGTAAACTACTTTTATGTTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 72 bp ACGGAAGACAGACACTTGGGCATGAACTTAGGTGGCTaGCTTTCATACGACAAGCTTGTTGCAAAACTCAAC +
Preference number: 3 (lower is better)
Translates to: TEDRHLGMNLGG*LSYDKLVAKLN
Trigger: GTTGAGTTTTGCAACAAGCTTGTCGTATGAAAGCCAGCCACCTAAGTTCATGCCCAAGTGTCTGTCTTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR GCA 72 bp ACATTAGTTCATTTAGCTTTGTTTCCTCTTCCCTACTaGGCCACACTATTAAACGAAAGAGAGGGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: TLVHLALFPLPY*ATLLNEREGPG
Trigger: GCCAGGCCCCTCTCTTTCGTTTAATAGTGTGGCGCAGTAGGGAAGAGGAAACAAAGCTAAATGAACTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR-3UTR CAA 90 bp ATGAACATGGGCAGTTGCCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGCATACATTGCTTGTTTaGTCCTGTACACAGACTGTA +
Preference number: 3 (lower is better)
Translates to: MNMGSCHTTVTRKSTNGQHTLLV*SCTQTV
Trigger: TACAGTCTGTGTACAGGACAAAACAAGCAATGTATG...CTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR CCA 72 bp TTTCCAGATGTAAAGATTGAATTCAACAGGTTCAGATaGCATCTGTCTCGACCCAGAACCCACACTGAAGTG +
Preference number: 3 (lower is better)
Translates to: FPDVKIEFNRFR*HLSRPRTHTEV
Trigger: CACTTCAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp CGAGTCCCTAATATTGCATTTTCCAGATGTAAAGATTaGATTCAACAGGTTCAGATGGCATCTGTCTCGACC +
Preference number: 3 (lower is better)
Translates to: RVPNIAFSRCKD*IQQVQMASVST
Trigger: GGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAAATGCAATATTAGGGACTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CAA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTTACTATGTTCTTTGGTaGAATACAGTTTCTAGACCC +
Preference number: 3 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGYYVLW*NTVSRP
Trigger: GGGTCTAGAAACTGTATTCAACCAAAGAACATAGTA...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR-3UTR CAA 90 bp AGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCAGTGCCCGAGTCCCTAATATaGCATTTTCCAGATGTAAAG +
Preference number: 3 (lower is better)
Translates to: SNCRANSSRLNHFRFMPVPESLI*HFPDVK
Trigger: CTTTACATCTGGAAAATGCAATATTAGGGACTCGGG...CACTGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp AGAATCCTAAAGATCATATGGAAGCAAAGAAGACCATaGATGGCTAGGGTGTCAGGTACTTATGTAGCAAAA +
Preference number: 3 (lower is better)
Translates to: RILKIIWKQRRP*MARVSGTYVAK
Trigger: TTTTGCTACATAAGTACCTGACACCCTAGCCATTCATGGTCTTCTTTGCTTCCATATGATCTTTAGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
3UTR TCA 72 bp CTCAACCATCAAGAAAGGTTTGAAGAAACACTAGTCTaGGAAATGAGATTACAGCAAGAGCCTGTGGATTTT +
Preference number: 3 (lower is better)
Translates to: LNHQERFEETLV*EMRLQQEPVDF
Trigger: AAAATCCACAGGCTCTTGCTGTAATCTCATTTCTCAGACTAGTGTTTCTTCAAACCTTTCTTGATGGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR TCA 72 bp CTTGATGCCTGTAACATAAACAACCATTTGGGGAAGTaGTCTTCAAGTTGTCAATATTTAATGGTATCTATC +
Preference number: 3 (lower is better)
Translates to: LDACNINNHLGK*SSSCQYLMVSI
Trigger: GATAGATACCATTAAATATTGACAACTTGAAGATCACTTCCCCAAATGGTTGTTTATGTTACAGGCATCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGACTGCCACATCTCTTCTaGAGACGGAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRLPHLF*RRRGSG
Trigger: CCCAGAACCTCTCCGTCTTCAGAAGAGATGTGGCAG...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGACCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GCACAGGAGCGAGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCACGCAGATTCGTCTGCTaGACTGCCCAGGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: AQERGPWGRGMGMNESRARRFVC*TAQEVK
Trigger: TTTGACTTCCTGGGCAGTTCAGCAGACGAATCTGCG...TGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCTCGCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGCCATCAGAAGGCGAGTaGGGGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWPSEGE*GLCRRL
Trigger: CAACCTTCTACACAGCCCTCACTCGCCTTCTGATGG...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp ACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGCACGAAAGTGCTAACTaGGACAGCAGTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TRAEQSNTDLWLCQGSPLHESAN*DSSGGS
Trigger: GCTCCCACCACTGCTGTCTCAGTTAGCACTTTCGTG...CAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp GCACAGGAGCGAGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCACAAGTGGGGTTCAGCTaGCTTCACAAAAGGAACGGA +
Preference number: 4 (lower is better)
Translates to: AQERGPWGRGMGMNESRAQVGFS*LHKRNG
Trigger: TCCGTTCCTTTTGTGAAGTCAGCTGAACCCCACTTG...TGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCTCGCTCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGATGCAGCAAGTCACTGTaGGACACTGAAAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRCSKSL*DTESSI
Trigger: AATGCTGCTTTCAGTGTCTCACAGTGACTTGCTGCA...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGTCATGTGGTCCTGGGTaGGACATTCCAGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: ICERRCWSGEACAVLWEESCGPG*DIPAVD
Trigger: ATCCACTGCTGGAATGTCTCACCCAGGACCACATGA...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGCACAGCTGCTCCAGCTaGTGGAACACGGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMHSCSS*WNTVAV
Trigger: CACTGCTACCGTGTTCCAGCAGCTGGAGCAGCTGTG...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCAGAGCAACACAGAGCTGCTCCAGCTGCTaGAACACGGTAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RTVGKRDGNEREQSRATQSCSSC*NTVAVS
Trigger: TGACACTGCTACCGTGTTCCAGCAGCTGGAGCAGCT...CTGTGTTGCTCTGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAAACTTGTACAGCAGCTaGAGGAGACCACTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRNLYSS*RRPLCQ
Trigger: TTGACACAGTGGTCTCCTCCAGCTGCTGTACAAGTT...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CGACCCAGAACCCACACTGAAGTGAGGGCTGCATCTTCACCAAATCCACAGCCGCTGTGTCAAGTGTGGTaGGTCCCTCTGAGAGAGATG +
Preference number: 4 (lower is better)
Translates to: RPRTHTEVRAASSPNPQPLCQVW*VPLREM
Trigger: CATCTCTCTCAGAGGGACTCACCACACTTGACACAG...CGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGGCTACGCAGGGCCTCTaGCACATCTCTTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMATQGL*HISSED
Trigger: GTCTTCAGAAGAGATGTGGCAGAGGCCCTGCGTAGC...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp GAGGCACCGGTGCTTCCCTATCTAGTGCTGTGCCTGTaGCCATGGCTTGGAAATGCCACCAGCCTACATGAT +
Preference number: 4 (lower is better)
Translates to: EAPVLPYLVLCL*PWLGNATSLHD
Trigger: ATCATGTAGGCTGGTGGCATTTCCAAGCCATGGCAACAGGCACAGCACTAGATAGGGAAGCACCGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGAAATGTAACAGTCTCTaGCCAGCCTGCATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ICERRCWSGEACAVLWEEKCNSL*PACIAS
Trigger: AGAGGCTATGCAGGCTGGTCAGAGACTGTTACATTT...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GCACAGGAGCGAGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCATTGGAATCTGCACTGTaGAAAGATCGTCCGCAGATT +
Preference number: 4 (lower is better)
Translates to: AQERGPWGRGMGMNESRALESAL*KDRPQI
Trigger: AATCTGCGGACGATCTTTGCACAGTGCAGATTCCAA...TGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCTCGCTCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGGAGACATTCCAGCAGTaGATAGTAAGACTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ICERRCWSGEACAVLWEEETFQQ*IVRLAQ
Trigger: CTGAGCCAGTCTTACTATCCACTGCTGGAATGTCTC...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp AGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCAGAGCAACACAGCCTCTATTCTTTCAGTaGGATCGGTCCCTACGTAGA +
Preference number: 4 (lower is better)
Translates to: RTVGKRDGNEREQSRATQPLFFQ*DRSLRR
Trigger: TCTACGTAGGGACCGATCTCACTGAAAGAATAGAGG...CTGTGTTGCTCTGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGGAGAGGCCTGGATACTaGCCACTGGTTCCGACAATC +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKERPGY*PLVPTI
Trigger: GATTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GTTTACCTCAAGACAGACTGGCCTCAAACTCAGAGATCCACCTGCCTCTGCTCCTGCAGTGTTCCACCGTaGCCTGGAGGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VYLKTDWPQTQRSTCLCSCSVPP*PGGTSS
Trigger: TGAAGAAGTTCCTCCAGGGCACGGTGGAACACTGCA...GGAGCAGAGGCAGGTGGATCTCTGAGTTTGAGGCCAGTCTGTCTTGAGGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp ATGAACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCCAGGTTGTTGGAATCTaGACTGTGCAAAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: MNESRAEQHRPVAMPGKPQVVGI*TVQRSS
Trigger: GGACGATCTTTGCACAGTGCAGATTCCAACAACCTG...GGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACCACAAAAGGAACGGATaGTACCATCCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYHKRNG*YHPLPQ
Trigger: CTGTGGCAGAGGATGGTAGCATCCGTTCCTTTTGTG...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GCCTGTTGCCATGGCTTGGAAATGCCACCAGCCTACATGATCATCGACAAACATCACAGCTGCTCCAGCTaGTGGAACACGGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ACCHGLEMPPAYMIIDKHHSCSS*WNTVAV
Trigger: CACTGCTACCGTGTTCCAGCAGCTGGAGCAGCTGTG...ATGTTTGTCGATGATCATGTAGGCTGGTGGCATTTCCAAGCCATGGCAACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp GGCTGTGTAGAAGGTTGTCCGGCACCTGAAGTCACCCACATTGTAAGTTTCACTCACAGCTGCTCCAGCTaGTGGAACACGGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GCVEGCPAPEVTHIVSFTHSCSS*WNTVAV
Trigger: CACTGCTACCGTGTTCCAGCAGCTGGAGCAGCTGTG...AGTGAAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp AGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCAGAGCAACACAGCTGAGACAGCAGTGGTaGGAGCGAGTGATACAAATT +
Preference number: 4 (lower is better)
Translates to: RTVGKRDGNEREQSRATQLRQQW*ERVIQI
Trigger: AATTTGTATCACTCGCTCCCACCACTGCTGTCTCAG...CTGTGTTGCTCTGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: ICERRCWSGEACAVLWEESSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGGTGATGAAGCTCATGTaGTCCTGGGTGAGACATTCC +
Preference number: 4 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMVMKLM*SWVRHS
Trigger: GGAATGTCTCACCCAGGACCACATGAGCTTCATCAC...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCAGAACCCACACTGGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLNSTGSDGICLDPEPTLAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...CAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGTGCTTGGGGAGAGGCTaGCTGTTTATCAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKCLGRG*LFIRLA
Trigger: GGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCA...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp TTTCCCACGCTCCCTTTGCACACGGAAGACAGACACTaGGGCATGAACTTAGGTGGCTGGCTTTCATACGAC +
Preference number: 4 (lower is better)
Translates to: FPTLPLHTEDRH*GMNLGGWLSYD
Trigger: GTCGTATGAAAGCCAGCCACCTAAGTTCATGCCCAAGTGTCTGTCTTCCGTGTGCAAAGGGAGCGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACCCTCTATTCTTTCAGTaGGATCGGTCCCTACGTAGA +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYPLFFQ*DRSLRR
Trigger: TCTACGTAGGGACCGATCTCACTGAAAGAATAGAGG...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTCAAAGTTCAGGCAGCTaGGGACCAGCTTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: AEQSNTDLWLCQGSPLFCQSSGS*GPALRP
Trigger: AGGTCTTAAAGCTGGTCCTCAGCTGCCTGAACTTTG...ACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp CGACCCAGAACCCACACTGAAGTGAGGGCTGCATCTTCACCAAATCCACAGCCGACGAGCATACACCTTTaGGGTTCTTTGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: RPRTHTEVRAASSPNPQPTSIHL*GSLKLI
Trigger: GATCAGCTTCAAAGAACCTCAAAGGTGTATGCTCGT...CGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAACACACAATGCAGACTTaGGAGCTGAGTAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKHTMQT*ELSSRW
Trigger: CCATCTGCTACTCAGCTCTCAAGTCTGCATTGTGTG...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp AGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCAGAGCAACACAGTTATCACTCCTATTATaGAGTGTTCCACCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RTVGKRDGNEREQSRATQLSLLL*SVPPCP
Trigger: AGGGCACGGTGGAACACTGCATAATAGGAGTGATAA...CTGTGTTGCTCTGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGCCATCCATAGCATCATaGTCATCTGTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: ICERRCWSGEACAVLWEEPSIAS*SSVLVY
Trigger: ATATACCAGCACAGATGAGCATGATGCTATGGATGG...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp ATGAACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: MNESRAEQHRPVAMPGKPGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCCCAGGGTTTGTCTGATCC...GGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCAAGTAATGAACACTGTTaGGGGCAAACTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSSNEHC*GQTPNA
Trigger: AGCATTGGGAGTTTGCCCCCAACAGTGTTCATTACT...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp CGACCCAGAACCCACACTGAAGTGAGGGCTGCATCTTCACCAAATCCACAGCCGCATGCTCATCTGTGCTaGTATATGTTAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RPRTHTEVRAASSPNPQPHAHLC*YMLVSL
Trigger: GAGGGAGACTAACATATACCAGCACAGATGAGCATG...CGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAAAAGCTCATGTGGTCCTaGGTGAGACATTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKKLMWS*VRHSSS
Trigger: ACTGCTGGAATGTCTCACCCAGGACCACATGAGCTT...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp ACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTCGGGTAACAAGTTTTaGAAGACATGTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TRAEQSNTDLWLCQGSPLSGNKF*KTCCCK
Trigger: CTTGCAGCAACATGTCTTTCAAAACTTGTTACCCGA...CAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGTCAGGATGTAGTTTCTaGTGTCTATCCTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWSGCSF*CLSSVQ
Trigger: TTGAACAGAGGATAGACATCAGAAACTACATCCTGA...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GCACAGGAGCGAGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCATCTTCACATCAGCAATaGTTTCTCGGAAAACAAACT +
Preference number: 4 (lower is better)
Translates to: AQERGPWGRGMGMNESRASSHQQ*FLGKQT
Trigger: AGTTTGTTTTCCGAGAAATCATTGCTGATGTGAAGA...TGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCTCGCTCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACCAAAGTTCAGGCAGCTaGGGACCAGCTTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHQSSGS*GPALRP
Trigger: AGGTCTTAAAGCTGGTCCTCAGCTGCCTGAACTTTG...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp ATGAACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCAGTGGTGGGAGCGAGTaGTACAAATTGAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: MNESRAEQHRPVAMPGKPSGGSE*YKLKKR
Trigger: TCTTTTCTTCAATTTGTATCACTCGCTCCCACCACT...GGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCAAGTGGTGGGAGCGAGTaGTACAAATTGAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSSGGSE*YKLKKR
Trigger: TCTTTTCTTCAATTTGTATCACTCGCTCCCACCACT...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGCAAGTGGGGTTCAGCTaGCTTCACAAAAGGAACGGA +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKQVGFS*LHKRNG
Trigger: TCCGTTCCTTTTGTGAAGTCAGCTGAACCCCACTTG...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CGACCCAGAACCCACACTGAAGTGAGGGCTGCATCTTCACCAAATCCACAGCCGGTCACTGTGAGACACTaGAAGCAGCATTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: RPRTHTEVRAASSPNPQPVTVRH*KQHFDK
Trigger: TTTGTCAAAATGCTGCTTTCAGTGTCTCACAGTGAC...CGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACAGACAATGGTGTTCATaGGGACAGACATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYRQWCS*GQTSSA
Trigger: AGCAGATGATGTCTGTCCTCATGAACACCATTGTCT...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACTTGGAATCTGCACTGTaGAAAGATCGTCCGCAGATT +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYLESAL*KDRPQI
Trigger: AATCTGCGGACGATCTTTGCACAGTGCAGATTCCAA...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACCTTGCTGAGACATTCTaGGCTGTCAATCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYLAETF*AVNQFQ
Trigger: TTGGAACTGATTGACAGCCCAGAATGTCTCAGCAAG...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAACTGAGACAGCAGTGGTaGGAGCGAGTGATACAAATT +
Preference number: 4 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKLRQQW*ERVIQI
Trigger: AATTTGTATCACTCGCTCCCACCACTGCTGTCTCAG...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GAGGCACCGGTGCTTCCCTATCTAGTGCTGTGCCTGTTGCCATGGCTTGGAAATAGTAATGAACACTGTTaGGGGCAAACTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: EAPVLPYLVLCLLPWLGNSNEHC*GQTPNA
Trigger: AGCATTGGGAGTTTGCCCCCAACAGTGTTCATTACT...ATTTCCAAGCCATGGCAACAGGCACAGCACTAGATAGGGAAGCACCGGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAACTGGATACTGACCACTaGTTCCGACAATCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKLDTDH*FRQSSK
Trigger: CTTTGAGGATTGTCGGAACCAGTGGTCAGTATCCAG...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACTCGGGTAACAAGTTTTaGAAGACATGTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYSGNKF*KTCCCK
Trigger: CTTGCAGCAACATGTCTTTCAAAACTTGTTACCCGA...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp AGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCAGAGCAACACAGTCAGGATGTAGTTTCTaGTGTCTATCCTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RTVGKRDGNEREQSRATQSGCSF*CLSSVQ
Trigger: TTGAACAGAGGATAGACATCAGAAACTACATCCTGA...CTGTGTTGCTCTGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp CTAGGCTTCCAGAGTCCTAAACACATCTCTCTGCAGGCAGCAATTGCAGAGCTACAAAGTTCAGGCAGCTaGGGACCAGCTTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: LGFQSPKHISLQAAIAELQSSGS*GPALRP
Trigger: AGGTCTTAAAGCTGGTCCTCAGCTGCCTGAACTTTG...TAGCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAGGACTCTGGAAGCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CGACCCAGAACCCACACTGAAGTGAGGGCTGCATCTTCACCAAATCCACAGCCGGCAAACTCCCAATGCTaGAGGCTAGTAATAGTAAAA +
Preference number: 4 (lower is better)
Translates to: RPRTHTEVRAASSPNPQPANSQC*RLVIVK
Trigger: TTTTACTATTACTAGCCTTCAGCATTGGGAGTTTGC...CGGCTGTGGATTTGGTGAAGATGCAGCCCTCACTTCAGTGTGGGTTCTGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCTGTGTAGAAGGTTGTCCGGCACCTGAAGTCACCCACATTGTAAGTTTCACTCAAGTGGGGTTCAGCTaGCTTCACAAAAGGAACGGA +
Preference number: 4 (lower is better)
Translates to: GCVEGCPAPEVTHIVSFTQVGFS*LHKRNG
Trigger: TCCGTTCCTTTTGTGAAGTCAGCTGAACCCCACTTG...AGTGAAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp CTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAACTATTCGTCTGCTGAACTaGCCAGGAAGTCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LANQFCHGQMNMGSCHTTIRLLN*PGSQSS
Trigger: TGAACTTTGACTTCCTGGGCAGTTCAGCAGACGAAT...AGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGCATCATGCTCATCTGTaGTGGTATATGTTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMHHAHL*WYMLVS
Trigger: GGAGACTAACATATACCAGCACAGATGAGCATGATG...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp CTAGGCTTCCAGAGTCCTAAACACATCTCTCTGCAGGCAGCAATTGCAGAGCTAGATTGGAGTAGTACATaGGGGTTCTCCATACCACCG +
Preference number: 4 (lower is better)
Translates to: LGFQSPKHISLQAAIAELDWSST*GFSIPP
Trigger: CGGTGGTATGGAGAACCCGCATGTACTACTCCAATC...TAGCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAGGACTCTGGAAGCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACACAGACATCATCTGCTaGAGAACATCTGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYTDIIC*RTSGFC
Trigger: ACAAAACCCAGATGTTCTGCAGCAGATGATGTCTGT...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTCTTGCTGAGACATTCTaGGCTGTCAATCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: AEQSNTDLWLCQGSPLFCLAETF*AVNQFQ
Trigger: TTGGAACTGATTGACAGCCCAGAATGTCTCAGCAAG...ACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGGTTTTGCTGAAGGTCTaGAATAATCAACCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWVLLKV*NNQPSS
Trigger: TGAACTTGGTTGATTATTCCAGACCTTCAGCAAAAC...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGAAGACGGAGAGGTTCTaGGTAAACCTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKKTERF*VNLSLF
Trigger: GAACAGAGACAGGTTTACCCAGAACCTCTCCGTCTT...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp GAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTATaGTCACAGTGTAATAAGGATACATCCAGTCAAACA +
Preference number: 4 (lower is better)
Translates to: EGPGIPLCTELV*SQCNKDTSSQT
Trigger: TGTTTGACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp ATGAACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCTGTTCTAGTAAAAGTTaGCACTTGCTGAGACATTCT +
Preference number: 4 (lower is better)
Translates to: MNESRAEQHRPVAMPGKPCSSKS*HLLRHS
Trigger: AGAATGTCTCAGCAAGTGTCAACTTTTACTAGAACA...GGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp GTTTACCTCAAGACAGACTGGCCTCAAACTCAGAGATCCACCTGCCTCTGCTCCAGAAGTGTCACGGAATaGGGTAGCTATTTTCCTATG +
Preference number: 4 (lower is better)
Translates to: VYLKTDWPQTQRSTCLCSRSVTE*GSYFPM
Trigger: CATAGGAAAATAGCTACCTCATTCCGTGACACTTCT...GGAGCAGAGGCAGGTGGATCTCTGAGTTTGAGGCCAGTCTGTCTTGAGGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp CACACTATTAAACGAAAGAGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTAGAAGTGTCACGGAATaGGGTAGCTATTTTCCTATG +
Preference number: 4 (lower is better)
Translates to: HTIKRKRGAWHPSVHRAGRSVTE*GSYFPM
Trigger: CATAGGAAAATAGCTACCTCATTCCGTGACACTTCT...ACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCTCTTTCGTTTAATAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp GCCAAGAAACGGGAAGTGTTCACTCGTGTGATTTTTCAGCATGAATTTCACAGCCACGAAAGTGCTAACTaGGACAGCAGTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AKKREVFTRVIFQHEFHSHESAN*DSSGGS
Trigger: GCTCCCACCACTGCTGTCTCAGTTAGCACTTTCGTG...GCTGTGAAATTCATGCTGAAAAATCACACGAGTGAACACTTCCCGTTTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp CTAGGCTTCCAGAGTCCTAAACACATCTCTCTGCAGGCAGCAATTGCAGAGCTAAAGGATATAGCCAACTaGCAGGTCACTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LGFQSPKHISLQAAIAELKDIAN*QVTEEL
Trigger: CAGTTCCTCAGTGACCTGTCAGTTGGCTATATCCTT...TAGCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAGGACTCTGGAAGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp AGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCAGAACCCACACTGTGTGGTGAGTCCCTCTaGGAGAGATGTGAGAACGTA +
Preference number: 4 (lower is better)
Translates to: RLNSTGSDGICLDPEPTLCGESL*ERCENV
Trigger: TACGTTCTCACATCTCTCTCAGAGGGACTCACCACA...CAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACATTCGTCTGCTGAACTaGCCAGGAAGTCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHIRLLN*PGSQSS
Trigger: TGAACTTTGACTTCCTGGGCAGTTCAGCAGACGAAT...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp ACGAGAGCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGAGAATTCATGATAATTaGCAGGATCAGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: TRAEQSNTDLWLCQGSPLRIHDN*QDQTNP
Trigger: AGGGTTTGTCTGATCCTGGCAATTATCATGAATTCT...CAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGCTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp GGCAGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCATGGCCAAGGACTTCCTaGTTGGGGAGAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSNCRANSSRLNHFRFMPWPRTS*LGRGWL
Trigger: CAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCA...TGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACCTTGCTGAGACATTCTaGGCTGTCAATCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHLAETF*AVNQFQ
Trigger: TTGGAACTGATTGACAGCCCAGAATGTCTCAGCAAG...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp CTGGGTCAGGTGATGATGGATCAGATCGTTCTCAAGGAGGAAGAACCCCAGTTGGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: LGQVMMDQIVLKEEEPQLGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCCCAGGGTTTGTCTGATCC...CAACTGGGGTTCTTCCTCCTTGAGAACGATCTGATCCATCATCACCTGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp GCCAAGAAACGGGAAGTGTTCACTCGTGTGATTTTTCAGCATGAATTTCACAGCAGCTGCTCCAGCTGCTaGAACACGGTAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: AKKREVFTRVIFQHEFHSSCSSC*NTVAVS
Trigger: TGACACTGCTACCGTGTTCCAGCAGCTGGAGCAGCT...GCTGTGAAATTCATGCTGAAAAATCACACGAGTGAACACTTCCCGTTTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCAAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp CTAGGCTTCCAGAGTCCTAAACACATCTCTCTGCAGGCAGCAATTGCAGAGCTACTCTCTGCTTCGAAGTaGCTTCTTCCCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LGFQSPKHISLQAAIAELLSASK*LLPFFC
Trigger: GCAAAAGAAGGGAAGAAGCCACTTCGAAGCAGAGAG...TAGCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAGGACTCTGGAAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp CAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTaGCCACACAACTGTCACAAGGAAAAGCACAAATGG +
Preference number: 4 (lower is better)
Translates to: QSVLPWADEHGQ*PHNCHKEKHKW
Trigger: CCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp GCCAAGAAACGGGAAGTGTTCACTCGTGTGATTTTTCAGCATGAATTTCACAGCCGCAGATTCGTCTGCTaGACTGCCCAGGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: AKKREVFTRVIFQHEFHSRRFVC*TAQEVK
Trigger: TTTGACTTCCTGGGCAGTTCAGCAGACGAATCTGCG...GCTGTGAAATTCATGCTGAAAAATCACACGAGTGAACACTTCCCGTTTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACAGTGGTGGGAGCGAGTaGTACAAATTGAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHSGGSE*YKLKKR
Trigger: TCTTTTCTTCAATTTGTATCACTCGCTCCCACCACT...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp AGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACTTCTTCAGGTTGTTGGAATCTaGACTGTGCAAAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: RQSLEDLLPARSTYALLLQVVGI*TVQRSS
Trigger: GGACGATCTTTGCACAGTGCAGATTCCAACAACCTG...AAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp CAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTATATTACACAAAAGGAACGGATaGTACCATCCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: QSNTDLWLCQGSPLFCILHKRNG*YHPLPQ
Trigger: CTGTGGCAGAGGATGGTAGCATCCGTTCCTTTTGTG...TAATATACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR GCA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACCCATCCATAGCATCATaGTCATCTGTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHPSIAS*SSVLVY
Trigger: ATATACCAGCACAGATGAGCATGATGCTATGGATGG...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp CAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACTTCTGAGACAGCAGTGGTaGGAGCGAGTGATACAAATT +
Preference number: 4 (lower is better)
Translates to: QRQSLEDLLPARSTYALLLRQQW*ERVIQI
Trigger: AATTTGTATCACTCGCTCCCACCACTGCTGTCTCAG...AAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp TTTCCAGATGTAAAGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCAGCTGCTCCAGCTGCTaGAACACGGTAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: FPDVKIEFNRFRWHLSRPSCSSC*NTVAVS
Trigger: TGACACTGCTACCGTGTTCCAGCAGCTGGAGCAGCT...GGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCAGCCCTTGAGTTTCATTaGATAAATCTTATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSALEFH*INLIFG
Trigger: TCCAAAGATAAGATTTATCCAATGAAACTCAAGGGC...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CTGGGTCAGGTGATGATGGATCAGATCGTTCTCAAGGAGGAAGAACCCCAGTTGTCAGGATGTAGTTTCTaGTGTCTATCCTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LGQVMMDQIVLKEEEPQLSGCSF*CLSSVQ
Trigger: TTGAACAGAGGATAGACATCAGAAACTACATCCTGA...CAACTGGGGTTCTTCCTCCTTGAGAACGATCTGATCCATCATCACCTGACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp CTAGGCTTCCAGAGTCCTAAACACATCTCTCTGCAGGCAGCAATTGCAGAGCTAAGTTTAGCGATGACTTaGATCAGAGCTTGGATGACA +
Preference number: 4 (lower is better)
Translates to: LGFQSPKHISLQAAIAELSLAMT*IRAWMT
Trigger: TGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACT...TAGCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAGGACTCTGGAAGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCTGTGTAGAAGGTTGTCCGGCACCTGAAGTCACCCACATTGTAAGTTTCACTAGTTTAGCGATGACTTaGATCAGAGCTTGGATGACA +
Preference number: 4 (lower is better)
Translates to: GCVEGCPAPEVTHIVSFTSLAMT*IRAWMT
Trigger: TGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACT...AGTGAAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp CTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAACTTTTCCTATGTTTTGCTaGAGGTCTGGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: LANQFCHGQMNMGSCHTTFPMFC*RSGIIN
Trigger: GTTGATTATTCCAGACCTTCAGCAAAACATAGGAAA...AGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp CTAGGCTTCCAGAGTCCTAAACACATCTCTCTGCAGGCAGCAATTGCAGAGCTAAGAAGTGTCACGGAATaGGGTAGCTATTTTCCTATG +
Preference number: 4 (lower is better)
Translates to: LGFQSPKHISLQAAIAELRSVTE*GSYFPM
Trigger: CATAGGAAAATAGCTACCTCATTCCGTGACACTTCT...TAGCTCTGCAATTGCTGCCTGCAGAGAGATGTGTTTAGGACTCTGGAAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GTTTATTGGTCACTGGGTAAGTGTCAGACACCAGACAGAGTGTGTTACTTATCTTGCAGTGTTCCACCGTaGCCTGGAGGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VYWSLGKCQTPDRVCYLSCSVPP*PGGTSS
Trigger: TGAAGAAGTTCCTCCAGGGCACGGTGGAACACTGCA...AGATAAGTAACACACTCTGTCTGGTGTCTGACACTTACCCAGTGACCAATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp AGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCAGAACCCACACTGTTATCACTCCTATTATaGAGTGTTCCACCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RLNSTGSDGICLDPEPTLLSLLL*SVPPCP
Trigger: AGGGCACGGTGGAACACTGCATAATAGGAGTGATAA...CAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GTTACTGTCTCTGAACTTTATCAGATATTGCTGAGGCAGAAAGGCCTGTGTGCATCCCTCCTACAACTGTaGCAACCAAGTAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: VTVSELYQILLRQKGLCASLLQL*QPSRSA
Trigger: GGCTGATCTACTTGGTTGGCACAGTTGTAGGAGGGA...TGCACACAGGCCTTTCTGCCTCAGCAATATCTGATAAAGTTCAGAGACAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAACTATTTTCTCATTGGTaGAGTGAGGTAATCTGGTAT +
Preference number: 4 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKLFSHW*SEVIWY
Trigger: ATACCAGATTACCTCACTGCACCAATGAGAAAATAG...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp ACACCTGACAAAGAAACTGGCTTAATACATAGACTGCCTTGCCCTCACCTGGACCATGCTCATCTGTGCTaGTATATGTTAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPDKETGLIHRLPCPHLDHAHLC*YMLVSL
Trigger: GAGGGAGACTAACATATACCAGCACAGATGAGCATG...GTCCAGGTGAGGGCAAGGCAGTCTATGTATTAAGCCAGTTTCTTTGTCAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CCA 90 bp TTTCCAGATGTAAAGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCCAAGGACTTCCTGCTTaGGGAGAGGCTGGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FPDVKIEFNRFRWHLSRPQGLPA*GEAGCL
Trigger: TAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTG...GGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GTTACTGTCTCTGAACTTTATCAGATATTGCTGAGGCAGAAAGGCCTGTGTGCAAAGTTCCTGAAGCACTaGCCAAGGACTTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VTVSELYQILLRQKGLCAKFLKH*PRTSCL
Trigger: CAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTT...TGCACACAGGCCTTTCTGCCTCAGCAATATCTGATAAAGTTCAGAGACAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTaGCCAGCCCGATCAACATACGCTTTACTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDL*PARSTYALLLP
Trigger: AGGAAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGTGTTCTAGTAAAAGTTaGCACTTGCTGAGACATTCT +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKCSSKS*HLLRHS
Trigger: AGAATGTCTCAGCAAGTGTCAACTTTTACTAGAACA...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp CAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACTTTCGGGTAACAAGTTTTaGAAGACATGTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QRQSLEDLLPARSTYALLSGNKF*KTCCCK
Trigger: CTTGCAGCAACATGTCTTTCAAAACTTGTTACCCGA...AAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp ATGAACATGGGCAGTTGCCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGAGTTTAGCGATGACTTaGATCAGAGCTTGGATGACA +
Preference number: 4 (lower is better)
Translates to: MNMGSCHTTVTRKSTNGQSLAMT*IRAWMT
Trigger: TGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACT...CTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp CAGAAGGCAGAGCTGCTTCCAGATACAACTTGCCACCCTCAGCTTTCCTTCAAGTCTTCACATCAGCAATaGTTTCTCGGAAAACAAACT +
Preference number: 4 (lower is better)
Translates to: QKAELLPDTTCHPQLSFKSSHQQ*FLGKQT
Trigger: AGTTTGTTTTCCGAGAAATCATTGCTGATGTGAAGA...CTTGAAGGAAAGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GAATTCTTGTCAAGCTCCTTGAAAGCTGATGTTTCTAAGTACAGGATTTGTCTCCACGAAAGTGCTAACTaGGACAGCAGTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EFLSSSLKADVSKYRICLHESAN*DSSGGS
Trigger: GCTCCCACCACTGCTGTCTCAGTTAGCACTTTCGTG...GAGACAAATCCTGTACTTAGAAACATCAGCTTTCAAGGAGCTTGACAAGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCAGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCATGCAGACTTGAGAGCTaGGTAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: GSNCRANSSRLNHFRFMPCRLES*VADGDA
Trigger: GGCATCTCCATCTGCTACTCAGCTCTCAAGTCTGCA...TGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp TGCACAGAGCTGGTATTGTCACAGTGTAATAAGGATACATCCAGTCAAACAGCATCCCTCCTACAACTGTaGCAACCAAGTAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: CTELVLSQCNKDTSSQTASLLQL*QPSRSA
Trigger: GGCTGATCTACTTGGTTGGCACAGTTGTAGGAGGGA...TGCTGTTTGACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp AAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACTTCCATCATGCTCATCTGTaGTGGTATATGTTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KGNPSKISCQPDQHTLYFHHAHL*WYMLVS
Trigger: GGAGACTAACATATACCAGCACAGATGAGCATGATG...GAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp AGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCAGTGCGCAGATTCGTCTGCTaGACTGCCCAGGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SNCRANSSRLNHFRFMPVRRFVC*TAQEVK
Trigger: TTTGACTTCCTGGGCAGTTCAGCAGACGAATCTGCG...CACTGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp ATGAACATGGGCAGTTGCCACACAACTGTCACAAGGAAAAGCACAAATGGCCAGGCAAACTCCCAATGCTaGAGGCTAGTAATAGTAAAA +
Preference number: 4 (lower is better)
Translates to: MNMGSCHTTVTRKSTNGQANSQC*RLVIVK
Trigger: TTTTACTATTACTAGCCTTCAGCATTGGGAGTTTGC...CTGGCCATTTGTGCTTTTCCTTGTGACAGTTGTGTGGCAACTGCCCATGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR TCA 90 bp ACACCTGACAAAGAAACTGGCTTAATACATAGACTGCCTTGCCCTCACCTGGACGCAAACTCCCAATGCTaGAGGCTAGTAATAGTAAAA +
Preference number: 4 (lower is better)
Translates to: TPDKETGLIHRLPCPHLDANSQC*RLVIVK
Trigger: TTTTACTATTACTAGCCTTCAGCATTGGGAGTTTGC...GTCCAGGTGAGGGCAAGGCAGTCTATGTATTAAGCCAGTTTCTTTGTCAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp AGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACTTCTTTATGTTTTACGAAACTaGTCCAGGAACCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: RQSLEDLLPARSTYALLLYVLRN*SRNQRT
Trigger: AGTTCTCTGGTTCCTGGATCAGTTTCGTAAAACATA...AAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp AGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCAGTGTGCAGTGTTCCACCGTaGCCTGGAGGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNCRANSSRLNHFRFMPVCSVPP*PGGTSS
Trigger: TGAAGAAGTTCCTCCAGGGCACGGTGGAACACTGCA...CACTGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp TTTCCAGATGTAAAGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCCAGGTTGTTGGAATCTaGACTGTGCAAAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: FPDVKIEFNRFRWHLSRPQVVGI*TVQRSS
Trigger: GGACGATCTTTGCACAGTGCAGATTCCAACAACCTG...GGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp GGCTGTGTAGAAGGTTGTCCGGCACCTGAAGTCACCCACATTGTAAGTTTCACTAGAATTCATGATAATTaGCAGGATCAGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: GCVEGCPAPEVTHIVSFTRIHDN*QDQTNP
Trigger: AGGGTTTGTCTGATCCTGGCAATTATCATGAATTCT...AGTGAAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp TACAGGCTCACATCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAACACAAAAGGAACGGATaGTACCATCCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: YRLTSSPVLQVCNNFRHEHKRNG*YHPLPQ
Trigger: CTGTGGCAGAGGATGGTAGCATCCGTTCCTTTTGTG...TTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGATGTGAGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp GGCTGTGTAGAAGGTTGTCCGGCACCTGAAGTCACCCACATTGTAAGTTTCACTCTATTTTCTCATTGGTaGAGTGAGGTAATCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GCVEGCPAPEVTHIVSFTLFSHW*SEVIWY
Trigger: ATACCAGATTACCTCACTGCACCAATGAGAAAATAG...AGTGAAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CAA 72 bp TCTAATTGTGTTACTGTCTCTGAACTTTATCAGATATaGCTGAGGCAGAAAGGCCTGTGTGCAGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SNCVTVSELYQI*LRQKGLCAVLG
Trigger: CCCCAGAACTGCACACAGGCCTTTCTGCCTCAGCAATATCTGATAAAGTTCAGAGACAGTAACACAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp ACACCTGACAAAGAAACTGGCTTAATACATAGACTGCCTTGCCCTCACCTGGACTCTTCACATCAGCAATaGTTTCTCGGAAAACAAACT +
Preference number: 4 (lower is better)
Translates to: TPDKETGLIHRLPCPHLDSSHQQ*FLGKQT
Trigger: AGTTTGTTTTCCGAGAAATCATTGCTGATGTGAAGA...GTCCAGGTGAGGGCAAGGCAGTCTATGTATTAAGCCAGTTTCTTTGTCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp TTTCCAGATGTAAAGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCATTCGTCTGCTGAACTaGCCAGGAAGTCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FPDVKIEFNRFRWHLSRPIRLLN*PGSQSS
Trigger: TGAACTTTGACTTCCTGGGCAGTTCAGCAGACGAAT...GGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GAATTCTTGTCAAGCTCCTTGAAAGCTGATGTTTCTAAGTACAGGATTTGTCTCGGAACTGAAGCGTCCTaGAGATTACAGGCTCACATC +
Preference number: 4 (lower is better)
Translates to: EFLSSSLKADVSKYRICLGTEAS*RLQAHI
Trigger: GATGTGAGCCTGTAATCTCCAGGACGCTTCAGTTCC...GAGACAAATCCTGTACTTAGAAACATCAGCTTTCAAGGAGCTTGACAAGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTAGCTCTCTGAAGAACTaGGAGATAGGCTGGGTATAT +
Preference number: 4 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGSSLKN*EIGWVY
Trigger: ATATACCCAGCCTATCTCCCAGTTCTTCAGAGAGCT...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp GTCACAGGCACTAGCCTGGTTTACTATGTTCTTTGGTaGAATACAGTTTCTAGACCCTTTAGCATTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VTGTSLVYYVLW*NTVSRPFSIVG
Trigger: TCCCACAATGCTAAAGGGTCTAGAAACTGTATTCAACCAAAGAACATAGTAAACCAGGCTAGTGCCTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp CAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTATATTAGTTTTGCTGAAGGTCTaGAATAATCAACCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QSNTDLWLCQGSPLFCILVLLKV*NNQPSS
Trigger: TGAACTTGGTTGATTATTCCAGACCTTCAGCAAAAC...TAATATACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp TACAGGCTCACATCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAAAGTAATGAACACTGTTaGGGGCAAACTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: YRLTSSPVLQVCNNFRHESNEHC*GQTPNA
Trigger: AGCATTGGGAGTTTGCCCCCAACAGTGTTCATTACT...TTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGATGTGAGCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp TATCATCTGTTATTCCTAAGACTTCTGACATACGAGCATACACCTGACAAAGAACCTCTATTCTTTCAGTaGGATCGGTCCCTACGTAGA +
Preference number: 4 (lower is better)
Translates to: YHLLFLRLLTYEHTPDKEPLFFQ*DRSLRR
Trigger: TCTACGTAGGGACCGATCTCACTGAAAGAATAGAGG...TTCTTTGTCAGGTGTATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR TCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTTATGTTTTACGAAACTaGTCCAGGAACCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGYVLRN*SRNQRT
Trigger: AGTTCTCTGGTTCCTGGATCAGTTTCGTAAAACATA...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GGCAGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCACATTGTAAGTTTCACTaGTGCCAAGAAACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSNCRANSSRLNHFRFMPHCKFH*CQETGS
Trigger: ACTTCCCGTTTCTTGGCATCAGTGAAACTTACAATG...TGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp GAATTCTTGTCAAGCTCCTTGAAAGCTGATGTTTCTAAGTACAGGATTTGTCTCCTGAAAGCAGCATTTTaGCAAAGGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: EFLSSSLKADVSKYRICLLKAAF*QRPGVH
Trigger: ATGTACTCCAGGCCTTTGTCAAAATGCTGCTTTCAG...GAGACAAATCCTGTACTTAGAAACATCAGCTTTCAAGGAGCTTGACAAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp TCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAATGTTTCCAGAACTTGGAATCTGCACTGTaGAAAGATCGTCCGCAGATT +
Preference number: 4 (lower is better)
Translates to: SSPVLQVCNNFRHECFQNLESAL*KDRPQI
Trigger: AATCTGCGGACGATCTTTGCACAGTGCAGATTCCAA...GTTCTGGAAACATTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR GCA 90 bp GTTACTGTCTCTGAACTTTATCAGATATTGCTGAGGCAGAAAGGCCTGTGTGCACTTCTTCCCTTCTTTTaGTATGTGCTTGAAGAGATA +
Preference number: 4 (lower is better)
Translates to: VTVSELYQILLRQKGLCALLPFF*YVLEEI
Trigger: TATCTCTTCAAGCACATAGCAAAAGAAGGGAAGAAG...TGCACACAGGCCTTTCTGCCTCAGCAATATCTGATAAAGTTCAGAGACAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CCA 90 bp GAATTCTTGTCAAGCTCCTTGAAAGCTGATGTTTCTAAGTACAGGATTTGTCTCGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: EFLSSSLKADVSKYRICLGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCCCAGGGTTTGTCTGATCC...GAGACAAATCCTGTACTTAGAAACATCAGCTTTCAAGGAGCTTGACAAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTTTTCCTATGTTTTGCTaGAGGTCTGGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGFPMFC*RSGIIN
Trigger: GTTGATTATTCCAGACCTTCAGCAAAACATAGGAAA...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR GCA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTAGAATTCATGATAATTaGCAGGATCAGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGRIHDN*QDQTNP
Trigger: AGGGTTTGTCTGATCCTGGCAATTATCATGAATTCT...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR TCA 90 bp TACAGGCTCACATCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAATTTCCTATGTTTTGCTaGAGGTCTGGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: YRLTSSPVLQVCNNFRHEFPMFC*RSGIIN
Trigger: GTTGATTATTCCAGACCTTCAGCAAAACATAGGAAA...TTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGATGTGAGCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
3UTR CAA 72 bp GTAAAATCTTTAATAGTGCCTGAGGACTACTCAGACTaGATAAAGCCTTTCAACAAGATGCAGAACACAAAC +
Preference number: 4 (lower is better)
Translates to: VKSLIVPEDYSD*IKPFNKMQNTN
Trigger: GTTTGTGTTCTGCATCTTGTTGAAAGGCTTTATCAAGTCTGAGTAGTCCTCAGGCACTATTAAAGATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CCA 90 bp AGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCAGTGGATAAATCTTATCTTTaGAGAGACTTCCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: SNCRANSSRLNHFRFMPVDKSYL*RDFQET
Trigger: TGTCTCTTGGAAGTCTCTCCAAAGATAAGATTTATC...CACTGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
3UTR CAA 72 bp TGTGGGAATCCAGATAGACTTGAAACATGTGCTGCTTaGAATACTGAATTTACATTGTATGTGCACTATTAT +
Preference number: 4 (lower is better)
Translates to: CGNPDRLETCAA*NTEFTLYVHYY
Trigger: ATAATAGTGCACATACAATGTAAATTCAGTATTCAAAGCAGCACATGTTTCAAGTCTATCTGGATTCCCACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp ATCTGTGAGAGACGGTGCTGGAGCGGGGAAGCATGTGCAGTGCTGTGGGAAGAGCTGAAATACTTCTCGTaGAGCAGGATGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: ICERRCWSGEACAVLWEELKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAACGAGAAGTATTTCAG...CTCTTCCCACAGCACTGCACATGCTTCCCCGCTCCAGCACCGTCTCTCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACCCAAGGACTTCCTGCTaGGGGAGAGGCTGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYPRTSC*GRGWLF
Trigger: AAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGG...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS GCA 90 bp TCCACTCCTTCCATCAAGTTCCTGAAGCACTGGCCAAGGACTTCCTaGTTGGGGAGAGGCTGGCTGTTTATCAGACTGGCCCTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: STPSIKFLKHWPRTS*LGRGWLFIRLALSS
Trigger: TGAACTGAGGGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTTGATGGAAGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp GAGGCACCGGTGCTTCCCTATCTAGTGCTGTGCCTGTTGCCATGGCTTGGAAATGACTTGAATCAGAGCTaGGATGACAAAGGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: EAPVLPYLVLCLLPWLGNDLNQS*DDKGRQ
Trigger: CTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTC...ATTTCCAAGCCATGGCAACAGGCACAGCACTAGATAGGGAAGCACCGGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACAAGTTACCAAGGTACTaGGCGCGCTCAGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYKLPRY*ARSGLL
Trigger: TAGCAGTCCTGAGCGCGCCAAGTACCTTGGTAACTT...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp AGGGCGGAGGGCAGAAGGTGGCAGCTGAACTCTGCTGGGTGGTCAGAAGGCAGACTCCCAGCTGATAGTTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: RAEGRRWQLNSAGWSEGRLPADS*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAACTATCAGCTGGGAG...TCTGCCTTCTGACCACCCAGCAGAGTTCAGCTGCCACCTTCTGCCCTCCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp GAAGAGGGCAGCTACAACCACCCTGCCCACAAGCACACAAGCCAGGCATTGTGGAACCTGTCTCTGTTCTaGACAGACAGGTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: EEGSYNHPAHKHTSQALWNLSLF*TDRFCS
Trigger: GGAACAGAACCTGTCTGTCAAGAACAGAGACAGGTT...CCACAATGCCTGGCTTGTGTGCTTGTGGGCAGGGTGGTTGTAGCTGCCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CCA 90 bp TCGTTGAGCAGGATGAGCCCCAGGAGAGGCCTGGATACTGACCACTaGTTCCGACAATCCTCAAAGACAATGGTGTTCATGAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: SLSRMSPRRGLDTDH*FRQSSKTMVFMRTD
Trigger: GTCTGTCCTCATGAACACCATTGTCTTTGAGGATTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGCTCATCCTGCTCAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAAGACTTGAATCAGAGCTaGGATGACAAAGGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKDLNQS*DDKGRQ
Trigger: CTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTC...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp CACACTATTAAACGAAAGAGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTGACTTGAATCAGAGCTaGGATGACAAAGGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: HTIKRKRGAWHPSVHRAGDLNQS*DDKGRQ
Trigger: CTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTC...ACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCTCTTTCGTTTAATAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS CCA 90 bp AAGTTCCTGAAGCACTGGCCAAGGACTTCCTGCTTGGGGAGAGGCTaGCTGTTTATCAGACTGGCCCTCAGTTCACTGAAATACTTCTCG +
Preference number: 5 (lower is better)
Translates to: KFLKHWPRTSCLGRG*LFIRLALSSLKYFS
Trigger: CGAGAAGTATTTCAGTGAACTGAGGGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CCA 90 bp ACAGACAGGTTCTGTTCCACTCCTTCCATCAAGTTCCTGAAGCACTaGCCAAGGACTTCCTGCTTGGGGAGAGGCTGGCTGTTTATCAGA +
Preference number: 5 (lower is better)
Translates to: TDRFCSTPSIKFLKH*PRTSCLGRGWLFIR
Trigger: TCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTTGATGGAAGGAGTGGAACAGAACCTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp AGGACCGTGGGGAAGAGGGATGGGAATGAACGAGAGCAGAGCAGAGCAACACAGGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: RTVGKRDGNEREQSRATQVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...CTGTGTTGCTCTGCTCTGCTCTCGTTCATTCCCATCCCTCTTCCCCACGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp GGCTGCATCTTCACCAAATCCACAGCCGTGGTCACAGGCACTAGCCTGGTTTACTCAAACCACCCCAACTaGGTGAGTTTAGCGATGACT +
Preference number: 5 (lower is better)
Translates to: GCIFTKSTAVVTGTSLVYSNHPN*VSLAMT
Trigger: AGTCATCGCTAAACTCACCAAGTTGGGGTGGTTTGA...GTAAACCAGGCTAGTGCCTGTGACCACGGCTGTGGATTTGGTGAAGATGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp AAGAAAGTGACCTCTGTGAGCCGGGTCTCAAATGCTGCGCTCAGTTATCTGCACAAGTTACCAAGGTACTaGGCGCGCTCAGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: KKVTSVSRVSNAALSYLHKLPRY*ARSGLL
Trigger: TAGCAGTCCTGAGCGCGCCAAGTACCTTGGTAACTT...GTGCAGATAACTGAGCGCAGCATTTGAGACCCGGCTCACAGAGGTCACTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCAACTGAAAGCAGCATTTaGACAAAGGCCTGGAGTACA +
Preference number: 5 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSTESSI*TKAWST
Trigger: TGTACTCCAGGCCTTTGTCAAAATGCTGCTTTCAGT...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 90 bp TTCTGCACCTCAAACCACCCCAACTTGGTGAGTTTAGCGATGACTTaGATCAGAGCTTGGATGACAAAGGGCGCCAGCTTAGGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: FCTSNHPNLVSLAMT*IRAWMTKGASLGWD
Trigger: GTCCCAACCTAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTCACCAAGTTGGGGTGGTTTGAGGTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS-3UTR CAA 90 bp GCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATGGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: ARHCGRCLSTFTEEAVEMVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...CATTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp GTTTACCTCAAGACAGACTGGCCTCAAACTCAGAGATCCACCTGCCTCTGCTCCGAGTTTAGCGATGACTaGAATCAGAGCTTGGATGAC +
Preference number: 5 (lower is better)
Translates to: VYLKTDWPQTQRSTCLCSEFSDD*NQSLDD
Trigger: GTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTC...GGAGCAGAGGCAGGTGGATCTCTGAGTTTGAGGCCAGTCTGTCTTGAGGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp TCTCTAGGAGAGTCCTCTTCCCTAGCGGAGTGGGAGGAGTACGGTTCAGGCTCACATTACCAGACTCTGTaGATCTTGATCCTGAAGATT +
Preference number: 5 (lower is better)
Translates to: SLGESSSLAEWEEYGSGSHYQTL*ILILKI
Trigger: AATCTTCAGGATCAAGATCAACAGAGTCTGGTAATG...TGAGCCTGAACCGTACTCCTCCCACTCCGCTAGGGAAGAGGACTCTCCTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 90 bp TGCAGTGTTCCACCGTGCCCTGGAGGAACTTCTTCACATCAGCAATaGTTTCTCGGAAAACAAACTCATCCTTCTGCACCTCAAACCACC +
Preference number: 5 (lower is better)
Translates to: CSVPPCPGGTSSHQQ*FLGKQTHPSAPQTT
Trigger: GGTGGTTTGAGGTGCAGAAGGATGAGTTTGTTTTCCGAGAAATCATTGCTGATGTGAAGAAGTTCCTCCAGGGCACGGTGGAACACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS CCA 90 bp CTGGGAGATAGGCTGGGTATATCCAGTCAAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LGDRLGISSQTAWCS*SLCSVQRQSLEDLL
Trigger: CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATACCCAGCCTATCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS-3UTR CAA 90 bp CAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTATATTAAAGTTACCAAGGTACTaGGCGCGCTCAGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: QSNTDLWLCQGSPLFCILKLPRY*ARSGLL
Trigger: TAGCAGTCCTGAGCGCGCCAAGTACCTTGGTAACTT...TAATATACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp GCAGAGCAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTCTCCCAGCTGATAGTTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: AEQSNTDLWLCQGSPLFCLPADS*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAACTATCAGCTGGGAG...ACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAATACGAGCATACACCTTaGAGGTTCTTTGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKYEHTP*RFFEAD
Trigger: ATCAGCTTCAAAGAACCTCAAAGGTGTATGCTCGTA...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS GCA 90 bp CATGCTCATCTGTGCTGGTATATGTTAGTCTCCCTCCTACAACTGTaGCAACCAAGTAGATCAGCCATGCAAGACGTCCTTCTTGAATCG +
Preference number: 5 (lower is better)
Translates to: HAHLCWYMLVSLLQL*QPSRSAMQDVLLES
Trigger: CGATTCAAGAAGGACGTCTTGCATGGCTGATCTACTTGGTTGGCACAGTTGTAGGAGGGAGACTAACATATACCAGCACAGATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS GCA 90 bp GTATATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAT +
Preference number: 5 (lower is better)
Translates to: VYPVKQHGVAGLCVQ*KGNPSKISCQPDQH
Trigger: ATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS CCA 90 bp TCTGAAGAACTGGGAGATAGGCTGGGTATATCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: SEELGDRLGISSQTA*CSWSLCSVQRQSLE
Trigger: TTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATACCCAGCCTATCTCCCAGTTCTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS-3UTR CAA 90 bp CTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACACAACTGCTGAGCATAGGATGTaGTTCCTTGTTCTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: LANQFCHGQMNMGSCHTTAEHRM*FLVLVK
Trigger: TTTTACTAGAACAAGGAACAACATCCTATGCTCAGC...AGTTGTGTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp AAGCCAGGCATTGTGGCCGATGCCTATCAACCTTCACTGAGGAGGCTGTGGAAAGCTGAGCATAGGATGTaGTTCCTTGTTCTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: KPGIVADAYQPSLRRLWKAEHRM*FLVLVK
Trigger: TTTTACTAGAACAAGGAACAACATCCTATGCTCAGC...TTTCCACAGCCTCCTCAGTGAAGGTTGATAGGCATCGGCCACAATGCCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp AGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCAGAACCCACACTGTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: RLNSTGSDGICLDPEPTLWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...CAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp CAGAGCAACACAGACCTGTGGCTATGCCAGGGAAGCCCATTGTTTTGTATATTATCAAACCACCCCAACTaGGTGAGTTTAGCGATGACT +
Preference number: 5 (lower is better)
Translates to: QSNTDLWLCQGSPLFCILSNHPN*VSLAMT
Trigger: AGTCATCGCTAAACTCACCAAGTTGGGGTGGTTTGA...TAATATACAAAACAATGGGCTTCCCTGGCATAGCCACAGGTCTGTGTTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS-3UTR CAA 90 bp TTTCCAGATGTAAAGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: FPDVKIEFNRFRWHLSRPSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...GGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCTTTACATCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 90 bp TGTCAATCAGTTCCAAGAGTGCTTTCTCAGCCTCTATTCTTTCAGTaGGATCGGTCCCTACGTAGAGATGAGTACACAGCACTTCCAACT +
Preference number: 5 (lower is better)
Translates to: CQSVPRVLSQPLFFQ*DRSLRRDEYTALPT
Trigger: AGTTGGAAGTGCTGTGTACTCATCTCTACGTAGGGACCGATCTCACTGAAAGAATAGAGGCTGAGAAAGCACTCTTGGAACTGATTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS GCA 90 bp GTCTTTTCATATTCACATCTGCTAACTGTACACAGCTGCTCCAGCTaGTGGAACACGGTAGCAGTGTCATCCAGAGGGTCTTCTAAATTA +
Preference number: 5 (lower is better)
Translates to: VFSYSHLLTVHSCSS*WNTVAVSSRGSSKL
Trigger: TAATTTAGAAGACCCTCTGGATGACACTGCTACCGTGTTCCAGCAGCTGGAGCAGCTGTGTACAGTTAGCAGATGTGAATATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp TATTATCTCGCCAATCAGTTCTGCCATGGGCAGATGAACATGGGCAGTTGCCACCATTACCAGACTCTGTaGATCTTGATCCTGAAGATT +
Preference number: 5 (lower is better)
Translates to: YYLANQFCHGQMNMGSCHHYQTL*ILILKI
Trigger: AATCTTCAGGATCAAGATCAACAGAGTCTGGTAATG...GTGGCAACTGCCCATGTTCATCTGCCCATGGCAGAACTGATTGGCGAGATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037522.14
CDS CCA 90 bp TTTTCATATTCACATCTGCTAACTGTACACAGCTGCTCCAGCTGCTaGAACACGGTAGCAGTGTCATCCAGAGGGTCTTCTAAATTATCT +
Preference number: 5 (lower is better)
Translates to: FSYSHLLTVHSCSSC*NTVAVSSRGSSKLS
Trigger: AGATAATTTAGAAGACCCTCTGGATGACACTGCTACCGTGTTCCAGCAGCTGGAGCAGCTGTGTACAGTTAGCAGATGTGAATATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp AGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACTTCTTGCTGAGCATAGGATGTaGTTCCTTGTTCTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: RQSLEDLLPARSTYALLLAEHRM*FLVLVK
Trigger: TTTTACTAGAACAAGGAACAACATCCTATGCTCAGC...AAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp AGCTGTAAAGGCCTTCATTTCCTATGTTTGGATGAAGTCACATCCAACAGTGGTTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: SCKGLHFLCLDEVTSNSGLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...ACCACTGTTGGATGTGACTTCATCCAAACATAGGAAATGAAGGCCTTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp AGATTGAATTCAACAGGTTCAGATGGCATCTGTCTCGACCCAGAACCCACACTGACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: RLNSTGSDGICLDPEPTLTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...CAGTGTGGGTTCTGGGTCGAGACAGATGCCATCTGAACCTGTTGAATTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp GAATTCTTGTCAAGCTCCTTGAAAGCTGATGTTTCTAAGTACAGGATTTGTCTCACAGGAGGCTCCAAGTaGGTGATGAAGCTCATGTGG +
Preference number: 5 (lower is better)
Translates to: EFLSSSLKADVSKYRICLTGGSK*VMKLMW
Trigger: CCACATGAGCTTCATCACCAACTTGGAGCCTCCTGT...GAGACAAATCCTGTACTTAGAAACATCAGCTTTCAAGGAGCTTGACAAGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 90 bp GAGCATAGGATGTTGTTCCTTGTTCTAGTAAAAGTTGACACTTGCTaGGACATTCTGGGCTGTCAATCAGTTCCAAGAGTGCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: EHRMLFLVLVKVDTC*DILGCQSVPRVLSQ
Trigger: CTGAGAAAGCACTCTTGGAACTGATTGACAGCCCAGAATGTCTCAGCAAGTGTCAACTTTTACTAGAACAAGGAACAACATCCTATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS-3UTR CAA 90 bp TACAGGCTCACATCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAATCAAACCACCCCAACTaGGTGAGTTTAGCGATGACT +
Preference number: 5 (lower is better)
Translates to: YRLTSSPVLQVCNNFRHESNHPN*VSLAMT
Trigger: AGTCATCGCTAAACTCACCAAGTTGGGGTGGTTTGA...TTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGATGTGAGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS TCA 90 bp AAAGTGCTAACTGAGACAGCAGTGGTGGGAGCGAGTGATACAAATTaGAGAAAAGATCCAATGTTTCTGGCTCTAGGAAAATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: KVLTETAVVGASDTN*RKDPMFLALGKLFS
Trigger: GGAGAACAATTTTCCTAGAGCCAGAAACATTGGATCTTTTCTTCAATTTGTATCACTCGCTCCCACCACTGCTGTCTCAGTTAGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp GGCAGCAATTGCAGAGCTAATTCTTCTAGACTGAACCACTTTAGATTTATGCCAGAGTTTAGCGATGACTaGAATCAGAGCTTGGATGAC +
Preference number: 5 (lower is better)
Translates to: GSNCRANSSRLNHFRFMPEFSDD*NQSLDD
Trigger: GTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTC...TGGCATAAATCTAAAGTGGTTCAGTCTAGAAGAATTAGCTCTGCAATTGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS-3UTR CAA 90 bp TCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAATGTTTCCAGAACGAGTTTAGCGATGACTaGAATCAGAGCTTGGATGAC +
Preference number: 5 (lower is better)
Translates to: SSPVLQVCNNFRHECFQNEFSDD*NQSLDD
Trigger: GTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTC...GTTCTGGAAACATTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp TACAGGCTCACATCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAACTCCCAGCTGATAGTTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: YRLTSSPVLQVCNNFRHELPADS*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAACTATCAGCTGGGAG...TTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGATGTGAGCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS-3UTR CAA 90 bp TCTTCCCCAGTACTTCAGGTTTGTAACAATTTTCGTCATGAATGTTTCCAGAACCATTACCAGACTCTGTaGATCTTGATCCTGAAGATT +
Preference number: 5 (lower is better)
Translates to: SSPVLQVCNNFRHECFQNHYQTL*ILILKI
Trigger: AATCTTCAGGATCAAGATCAACAGAGTCTGGTAATG...GTTCTGGAAACATTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129179.8
CDS CAA 72 bp GCCAACCAAGTAGATCAGCCATGCAAGACGTCCTTCTaGAATCGCCATGTCAACAGCCAGCCCCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ANQVDQPCKTSF*NRHVNSQPRSS
Trigger: GCTGCTCCGGGGCTGGCTGTTGACATGGCGATTCAAGAAGGACGTCTTGCATGGCTGATCTACTTGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS TCA 72 bp GGAGGAGACCACTGTGTCAAGTGTGGTGAGTCCCTCTaGGAGAGATGTGAGAACGTACAGGAGCACAGGAGG +
Preference number: 6 (lower is better)
Translates to: GGDHCVKCGESL*ERCENVQEHRR
Trigger: CCTCCTGTGCTCCTGTACGTTCTCACATCTCTCTCAGAGGGACTCACCACACTTGACACAGTGGTCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS GCA 72 bp TCCATCAAGTTCCTGAAGCACTGGCCAAGGACTTCCTaGTTGGGGAGAGGCTGGCTGTTTATCAGACTGGCC +
Preference number: 6 (lower is better)
Translates to: SIKFLKHWPRTS*LGRGWLFIRLA
Trigger: GGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CAA 72 bp ATCAAGTTCCTGAAGCACTGGCCAAGGACTTCCTGCTaGGGGAGAGGCTGGCTGTTTATCAGACTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: IKFLKHWPRTSC*GRGWLFIRLAL
Trigger: GAGGGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CAA 90 bp ACTCCTTCCATCAAGTTCCTGAAGCACTGGCCAAGGACTTCCTGCTaGGGGAGAGGCTGGCTGTTTATCAGACTGGCCCTCAGTTCACTG +
Preference number: 6 (lower is better)
Translates to: TPSIKFLKHWPRTSC*GRGWLFIRLALSSL
Trigger: CAGTGAACTGAGGGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTTGATGGAAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 72 bp GTTGAGCAGGATGAGCCCCAGGAGAGGCCTGGATACTaGCCACTGGTTCCGACAATCCTCAAAGACAATGGT +
Preference number: 6 (lower is better)
Translates to: VEQDEPQERPGY*PLVPTILKDNG
Trigger: ACCATTGTCTTTGAGGATTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGCTCATCCTGCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CCA 72 bp AAGCACTGGCCAAGGACTTCCTGCTTGGGGAGAGGCTaGCTGTTTATCAGACTGGCCCTCAGTTCACTGAAA +
Preference number: 6 (lower is better)
Translates to: KHWPRTSCLGRG*LFIRLALSSLK
Trigger: TTTCAGTGAACTGAGGGCCAGTCTGATAAACAGCCAGCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CAA 90 bp TACAACTGTGCCAACCAAGTAGATCAGCCATGCAAGACGTCCTTCTaGAATCGCCATGTCAACAGCCAGCCCCGGAGCAGCATGCAGAAG +
Preference number: 6 (lower is better)
Translates to: YNCANQVDQPCKTSF*NRHVNSQPRSSMQK
Trigger: CTTCTGCATGCTGCTCCGGGGCTGGCTGTTGACATGGCGATTCAAGAAGGACGTCTTGCATGGCTGATCTACTTGGTTGGCACAGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS CCA 72 bp AGGATGAGCCCCAGGAGAGGCCTGGATACTGACCACTaGTTCCGACAATCCTCAAAGACAATGGTGTTCATG +
Preference number: 6 (lower is better)
Translates to: RMSPRRGLDTDH*FRQSSKTMVFM
Trigger: CATGAACACCATTGTCTTTGAGGATTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGCTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CAA 72 bp GATGTGAGAACGTACAGGAGCACAGGAGGCTCCAAGTaGGTGATGAAGCTCATGTGGTCCTGGGTGAGACAT +
Preference number: 6 (lower is better)
Translates to: DVRTYRSTGGSK*VMKLMWSWVRH
Trigger: ATGTCTCACCCAGGACCACATGAGCTTCATCACCAACTTGGAGCCTCCTGTGCTCCTGTACGTTCTCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS GCA 72 bp CCCTCCTACAACTGTGCCAACCAAGTAGATCAGCCATaGAAGACGTCCTTCTTGAATCGCCATGTCAACAGC +
Preference number: 6 (lower is better)
Translates to: PSYNCANQVDQP*KTSFLNRHVNS
Trigger: GCTGTTGACATGGCGATTCAAGAAGGACGTCTTGCATGGCTGATCTACTTGGTTGGCACAGTTGTAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS CAA 72 bp CAACTTGGTGAGTTTAGCGATGACTTGAATCAGAGCTaGGATGACAAAGGGCGCCAGCTTAGGTTGGGACGC +
Preference number: 6 (lower is better)
Translates to: QLGEFSDDLNQS*DDKGRQLRLGR
Trigger: GCGTCCCAACCTAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTCACCAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS CAA 90 bp GATAGGCTGGGTATATCCAGTCAAACAGCATGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: DRLGISSQTAWCSWS*CSVQRQSLEDLLPA
Trigger: GGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATACCCAGCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS CAA 72 bp CTCAAACCACCCCAACTTGGTGAGTTTAGCGATGACTaGAATCAGAGCTTGGATGACAAAGGGCGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: LKPPQLGEFSDD*NQSLDDKGRQL
Trigger: AAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTCACCAAGTTGGGGTGGTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS CAA 90 bp AAACCACCCCAACTTGGTGAGTTTAGCGATGACTTGAATCAGAGCTaGGATGACAAAGGGCGCCAGCTTAGGTTGGGACGCCACATAATT +
Preference number: 6 (lower is better)
Translates to: KPPQLGEFSDDLNQS*DDKGRQLRLGRHII
Trigger: AATTATGTGGCGTCCCAACCTAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTCACCAAGTTGGGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS TCA 72 bp TCAAACCACCCCAACTTGGTGAGTTTAGCGATGACTTaGATCAGAGCTTGGATGACAAAGGGCGCCAGCTTA +
Preference number: 6 (lower is better)
Translates to: SNHPNLVSLAMT*IRAWMTKGASL
Trigger: TAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTCACCAAGTTGGGGTGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS TCA 72 bp CCACCGTGCCCTGGAGGAACTTCTTCACATCAGCAATaGTTTCTCGGAAAACAAACTCATCCTTCTGCACCT +
Preference number: 6 (lower is better)
Translates to: PPCPGGTSSHQQ*FLGKQTHPSAP
Trigger: AGGTGCAGAAGGATGAGTTTGTTTTCCGAGAAATCATTGCTGATGTGAAGAAGTTCCTCCAGGGCACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS GCA 72 bp CTGTGCTGGTATATGTTAGTCTCCCTCCTACAACTGTaGCAACCAAGTAGATCAGCCATGCAAGACGTCCTT +
Preference number: 6 (lower is better)
Translates to: LCWYMLVSLLQL*QPSRSAMQDVL
Trigger: AAGGACGTCTTGCATGGCTGATCTACTTGGTTGGCACAGTTGTAGGAGGGAGACTAACATATACCAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS CCA 72 bp AGGCTGGGTATATCCAGTCAAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAA +
Preference number: 6 (lower is better)
Translates to: RLGISSQTAWCS*SLCSVQRQSLE
Trigger: TTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATACCCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS CCA 72 bp CTGGGAGATAGGCTGGGTATATCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAA +
Preference number: 6 (lower is better)
Translates to: LGDRLGISSQTA*CSWSLCSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATACCCAGCCTATCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS CCA 72 bp CCGTTCAATAGCTCTCTGAAGAACTGGGAGATAGGCTaGGTATATCCAGTCAAACAGCATGGTGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: PFNSSLKNWEIG*VYPVKQHGVAG
Trigger: ACCAGCTACACCATGCTGTTTGACTGGATATACCCAGCCTATCTCCCAGTTCTTCAGAGAGCTATTGAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102815.10
ENSMUST00000207401.2
CDS CAA 90 bp GATGACTTGAATCAGAGCTTGGATGACAAAGGGCGCCAGCTTAGGTaGGGACGCCACATAATTCAGGATGTAGTTTCTGATGTCTATCCT +
Preference number: 6 (lower is better)
Translates to: DDLNQSLDDKGRQLR*GRHIIQDVVSDVYP
Trigger: AGGATAGACATCAGAAACTACATCCTGAATTATGTGGCGTCCCAACCTAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS TCA 72 bp CAGCTTCCGGTATTGCAGCAAGTCACTGTGAGACACTaGAAGCAGCATTTTGACAAAGGCCTGGAGTACATT +
Preference number: 6 (lower is better)
Translates to: QLPVLQQVTVRH*KQHFDKGLEYI
Trigger: AATGTACTCCAGGCCTTTGTCAAAATGCTGCTTTCAGTGTCTCACAGTGACTTGCTGCAATACCGGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 72 bp ACATCTGGGTTTTGTTGCATAAAATGTAACAGTCTCTaGCCAGCCTGCATAGCCTCTCTGCTTCGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: TSGFCCIKCNSL*PACIASLLRSG
Trigger: GCCACTTCGAAGCAGAGAGGCTATGCAGGCTGGTCAGAGACTGTTACATTTTATGCAACAAAACCCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS TCA 72 bp ACTGGTTCCGACAATCCTCAAAGACAATGGTGTTCATaGGGACAGACATCATCTGCTGCAGAACATCTGGGT +
Preference number: 6 (lower is better)
Translates to: TGSDNPQRQWCS*GQTSSAAEHLG
Trigger: ACCCAGATGTTCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTTGAGGATTGTCGGAACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS GCA 72 bp AGCCTCTCTGCTTCGAAGTGGCTTCTTCCCTTCTTTTaGTATGTGCTTGAAGAGATAGGTGACCATGTAGTC +
Preference number: 6 (lower is better)
Translates to: SLSASKWLLPFF*YVLEEIGDHVV
Trigger: GACTACATGGTCACCTATCTCTTCAAGCACATAGCAAAAGAAGGGAAGAAGCCACTTCGAAGCAGAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102815.10
CDS CAA 72 bp AATCAGAGCTTGGATGACAAAGGGCGCCAGCTTAGGTaGGGACGCCACATAATTCAGGATGTAGTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: NQSLDDKGRQLR*GRHIIQDVVSD
Trigger: ATCAGAAACTACATCCTGAATTATGTGGCGTCCCAACCTAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS GCA 72 bp CCTGTGTCAATTCACAAAGGATTATCACTCCTATTATaGAGTGTTCCACCGTGCCCTGGAGGAACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PVSIHKGLSLLL*SVPPCPGGTSS
Trigger: TGAAGAAGTTCCTCCAGGGCACGGTGGAACACTGCATAATAGGAGTGATAATCCTTTGTGAATTGACACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2
CDS GCA 72 bp AAAACACGGCAGGATAGTTCTCCATCCATAGCATCATaGTCATCTGTGCTGGTATATGTTAGTCTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: KTRQDSSPSIAS*SSVLVYVSLPP
Trigger: AGGAGGGAGACTAACATATACCAGCACAGATGAGCATGATGCTATGGATGGAGAACTATCCTGCCGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000207401.2
CDS CCA 72 bp ACGAGCATACACCTTAACTATTTTCCAAGCCTTCTCTaGAACTCTGGAAACATCATTCTTCGGGCGTACAAC +
Preference number: 6 (lower is better)
Translates to: TSIHLNYFPSLL*NSGNIILRAYN
Trigger: GTTGTACGCCCGAAGAATGATGTTTCCAGAGTTCCAGAGAAGGCTTGGAAAATAGTTAAGGTGTATGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207401.2
CDS CAA 72 bp ATCCTTTTCACCCCTTTAATTAAGTTACCAAGGTACTaGGCGCGCTCAGGACTGCTAAATAAGGATCTTCTT +
Preference number: 6 (lower is better)
Translates to: ILFTPLIKLPRY*ARSGLLNKDLL
Trigger: AAGAAGATCCTTATTTAGCAGTCCTGAGCGCGCCAAGTACCTTGGTAACTTAATTAAAGGGGTGAAAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS CAA 90 bp CTTCCGCATACTCCTTCACCAAAACTAACTCTCCCAGCTGATAGTTaGTCTTTAAACGAGCCAAAAATCGACAGAATTCATGATAATTGC +
Preference number: 6 (lower is better)
Translates to: LPHTPSPKLTLPADS*SLNEPKIDRIHDNC
Trigger: GCAATTATCATGAATTCTGTCGATTTTTGGCTCGTTTAAAGACAAACTATCAGCTGGGAGAGTTAGTTTTGGTGAAGGAGTATGCGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS CAA 72 bp ACTCCTTCACCAAAACTAACTCTCCCAGCTGATAGTTaGTCTTTAAACGAGCCAAAAATCGACAGAATTCAT +
Preference number: 6 (lower is better)
Translates to: TPSPKLTLPADS*SLNEPKIDRIH
Trigger: ATGAATTCTGTCGATTTTTGGCTCGTTTAAAGACAAACTATCAGCTGGGAGAGTTAGTTTTGGTGAAGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
CDS CAA 72 bp TTTCTGATGTCTATCCTCTGTTCAATAGGTAAAGGATaGATTCGGGTAACAAGTTTTGAAAGACATGTTGCT +
Preference number: 6 (lower is better)
Translates to: FLMSILCSIGKG*IRVTSFERHVA
Trigger: AGCAACATGTCTTTCAAAACTTGTTACCCGAATCAATCCTTTACCTATTGAACAGAGGATAGACATCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037522.14
ENSMUST00000102815.10
ENSMUST00000129179.8
ENSMUST00000147751.2