Pregenerated sensors for RALYL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039717Ensembl transcript IDs: ENSMUST00000108372.4, ENSMUST00000108373.4, ENSMUST00000171075.8, ENSMUST00000191806.3, ENSMUST00000192209.6, ENSMUST00000193117.3, ENSMUST00000211860.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGCTGTCCACAAGAGCACAGTCAGACTCCTCAGGAAATAGGTGGTaGCTGGATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: KLSTRAQSDSSGNRW*LDHSFQLISVKHAH Trigger: GTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATCCAGTCACCACCTATTTCCTGAGGAGTCTGACTGTGCTCTTGTGGACAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR TCA 90 bp | CCAAGGACAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATaGGTCCTGGAAGCTGTCCACAAGAGCACAGTCAGACTCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PRTRQSFPYQFTSRP*VLEAVHKSTVRLLR Trigger: CCTGAGGAGTCTGACTGTGCTCTTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTGTCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 90 bp | TGTCCACAAGAGCACAGTCAGACTCCTCAGGAAATAGGTGGTGACTaGATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: CPQEHSQTPQEIGGD*IIHFSSLASSMLTG Trigger: ACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATCCAGTCACCACCTATTTCCTGAGGAGTCTGACTGTGCTCTTGTGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 90 bp | CAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTaGAAGCTGTCCACAAGAGCACAGTCAGACTCCTCAGGAAATAGG | + |
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Preference number: 1 (lower is better) Translates to: QDNLFLISLLLVHES*KLSTRAQSDSSGNR Trigger: CCTATTTCCTGAGGAGTCTGACTGTGCTCTTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 90 bp | TTTATTAAGAAATTATGTGCTGAGTGTGCCTATAGCCTGTGGGGATaGTCTCTCCCATTTCCACTGCACAAGACAATAGCCAAGAGTATT | + |
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Preference number: 1 (lower is better) Translates to: FIKKLCAECAYSLWG*SLPFPLHKTIAKSI Trigger: AATACTCTTGGCTATTGTCTTGTGCAGTGGAAATGGGAGAGACCATCCCCACAGGCTATAGGCACACTCAGCACATAATTTCTTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR GCA 90 bp | GATTTTCTTTTGTACAGTAAGTTAATGTATGTTCAAACACAGGCATaGCATGAGGAGTATAGAGAACGCATCCAGAGCATATTTCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: DFLLYSKLMYVQTQA*HEEYRERIQSIFQC Trigger: ACACTGAAATATGCTCTGGATGCGTTCTCTATACTCCTCATGGCATGCCTGTGTTTGAACATACATTAACTTACTGTACAAAAGAAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
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| 3UTR CCA 90 bp | TCATTTAATATTCAGAAGAGCAATACACATTCTCTGAATGTGATTTaGATGGTGACTTCTGTCAAGAATGCAGAGCCATCTGATTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: SFNIQKSNTHSLNVI*MVTSVKNAEPSDFL Trigger: AAGAAAATCAGATGGCTCTGCATTCTTGACAGAAGTCACCATCCAAATCACATTCAGAGAATGTGTATTGCTCTTCTGAATATTAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGAAATAGGTGGTGACTGGATCATTCATTTCAGCTCATTAGCGTCAAGCTGTTGCTGTCCATTGTaGAACCATCTTTCTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: PQEIGGDWIIHFSSLASSCCCPL*NHLSHF Trigger: AAAATGAGAAAGATGGTTTCACAATGGACAGCAACA...GCTTGACGCTAATGAGCTGAAATGAATGATCCAGTCACCACCTATTTCCTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR TCA 90 bp | TGGATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAACACTACATGACAATGTaGTCAACAATGACACATGCT | + |
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Preference number: 2 (lower is better) Translates to: WIIHFSSLASSMLTGQTKHYMTM*STMTHA Trigger: AGCATGTGTCATTGTTGATCACATTGTCATGTAGTG...TTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR TCA 90 bp | TCCACTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATAGGGTGTGCACTAACTaGAACTTTTGGATCCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: STAQDNSQEYLEYTMLGNRVCTN*NFWIQG Trigger: TCCTTGGATCCAAAAGTTTCAGTTAGTGCACACCCT...ATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGCACTACATGACAATGTaGTCAACAATGACACATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LHKTIAKSIWNIQCLGMEHYMTM*STMTHA Trigger: AGCATGTGTCATTGTTGATCACATTGTCATGTAGTG...CTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR CCA 90 bp | GATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTTTACATCAACTGAATTaGAGATGTTGCTGTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: DHSFQLISVKHAHRSNQSLHQLN*RCCCPL Trigger: CAATGGACAGCAACATCTCCAATTCAGTTGATGTAA...ACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTGAGGAGTCTCCTTTCTTCTTTTaGACTATTGTACACTACTTC | + |
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Preference number: 2 (lower is better) Translates to: IAKSIWNIQCLGMEDSEESPFFF*TIVHYF Trigger: GAAGTAGTGTACAATAGTCCAAAAGAAGAAAGGAGA...CTCCTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
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| 3UTR-3UTR TCA 90 bp | ATGACATTGTTGGAAACAAGCTTTAAGTGTAGGATTGCAACACTACATGACAATTGTTGCTGTCCATTGTaGAACCATCTTTCTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: MTLLETSFKCRIATLHDNCCCPL*NHLSHF Trigger: AAAATGAGAAAGATGGTTTCACAATGGACAGCAACA...ATTGTCATGTAGTGTTGCAATCCTACACTTAAAGCTTGTTTCCAACAATGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 72 bp | AAATTATGTGCTGAGTGTGCCTATAGCCTGTGGGGATaGTCTCTCCCATTTCCACTGCACAAGACAATAGCC | + |
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Preference number: 3 (lower is better) Translates to: KLCAECAYSLWG*SLPFPLHKTIA Trigger: GGCTATTGTCTTGTGCAGTGGAAATGGGAGAGACCATCCCCACAGGCTATAGGCACACTCAGCACATAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 72 bp | GAGCACAGTCAGACTCCTCAGGAAATAGGTGGTGACTaGATCATTCATTTCAGCTCATTAGCGTCAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: EHSQTPQEIGGD*IIHFSSLASSM Trigger: CATGCTTGACGCTAATGAGCTGAAATGAATGATCCAGTCACCACCTATTTCCTGAGGAGTCTGACTGTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 72 bp | CTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTaGAAGCTGTCCACAAGAGCACAGTCAGACTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFLISLLLVHES*KLSTRAQSDSS Trigger: TGAGGAGTCTGACTGTGCTCTTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR TCA 72 bp | AGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATaGGTCCTGGAAGCTGTCCACAAGAGCACAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: RQSFPYQFTSRP*VLEAVHKSTVR Trigger: TCTGACTGTGCTCTTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR TCA 72 bp | GGAGTAGGAGAGAAGATGGAGAGGGTGTGCACTAACTaGAACTTTTGGATCCAAGGACAAGACAATCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: GVGEKMERVCTN*NFWIQGQDNLF Trigger: GAAAAGATTGTCTTGTCCTTGGATCCAAAAGTTTCAGTTAGTGCACACCCTCTCCATCTTCTCTCCTACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR CCA 72 bp | CCATTTCCACTGCACAAGACAATAGCCAAGAGTATTTaGAATATACAATGCTTGGGAATGGAGGATTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PFPLHKTIAKSI*NIQCLGMEDSE Trigger: CTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAGTGGAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCACAATTTACATCAACTGAATaGGAGATGTTGCTGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: IFSLSVYFSSMSPGSCPQFTSTE*EMLLSI Trigger: AATGGACAGCAACATCTCCAATTCAGTTGATGTAAA...TTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR GCA 72 bp | TTGTACAGTAAGTTAATGTATGTTCAAACACAGGCATaGCATGAGGAGTATAGAGAACGCATCCAGAGCATA | + |
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Preference number: 3 (lower is better) Translates to: LYSKLMYVQTQA*HEEYRERIQSI Trigger: TATGCTCTGGATGCGTTCTCTATACTCCTCATGGCATGCCTGTGTTTGAACATACATTAACTTACTGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
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| 3UTR CCA 72 bp | ATTCAGAAGAGCAATACACATTCTCTGAATGTGATTTaGATGGTGACTTCTGTCAAGAATGCAGAGCCATCT | + |
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Preference number: 3 (lower is better) Translates to: IQKSNTHSLNVI*MVTSVKNAEPS Trigger: AGATGGCTCTGCATTCTTGACAGAAGTCACCATCCAAATCACATTCAGAGAATGTGTATTGCTCTTCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
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| 3UTR-3UTR CAA 90 bp | ATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTGAGGAGTTCCCTATGACATTGTaGGAAACAAGCTTTAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: IAKSIWNIQCLGMEDSEEFPMTL*ETSFKC Trigger: ACACTTAAAGCTTGTTTCCAACAATGTCATAGGGAA...CTCCTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR CAA 90 bp | CCTATGACATTGTTGGAAACAAGCTTTAAGTGTAGGATTGCAACACTACATGACACCATAAAACAACAATaGTACTGCTTGGAACACAGA | + |
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Preference number: 3 (lower is better) Translates to: PMTLLETSFKCRIATLHDTIKQQ*YCLEHR Trigger: TCTGTGTTCCAAGCAGTACAATTGTTGTTTTATGGT...GTCATGTAGTGTTGCAATCCTACACTTAAAGCTTGTTTCCAACAATGTCATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| 3UTR-3UTR CAA 90 bp | TCCACTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATTTCCCTATGACATTGTaGGAAACAAGCTTTAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: STAQDNSQEYLEYTMLGNFPMTL*ETSFKC Trigger: ACACTTAAAGCTTGTTTCCAACAATGTCATAGGGAA...ATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAGTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | AGCTGTCCACAAGAGCACAGTCAGACTCCTCAGGAAATAGGTGGTGACTGGATCAAGCCTGTACAGGGCTaGCAGGGGTCTCTTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SCPQEHSQTPQEIGGDWIKPVQG*QGSLTS Trigger: GGAAGTAAGAGACCCCTGTCAGCCCTGTACAGGCTT...GATCCAGTCACCACCTATTTCCTGAGGAGTCTGACTGTGCTCTTGTGGACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | TGGATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAACCCTGCGTGTGGTGGTaGCAGCCACTCTGGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: WIIHFSSLASSMLTGQTKPCVWW*QPLWDV Trigger: AACGTCCCAGAGTGGCTGTCACCACCACACGCAGGG...TTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| CDS-3UTR GCA 90 bp | AGCTGTCCACAAGAGCACAGTCAGACTCCTCAGGAAATAGGTGGTGACTGGATCGGGTTTGGGTTCCCCTaGCATGTTGATATATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SCPQEHSQTPQEIGGDWIGFGFP*HVDISL Trigger: CAGAGATATATCAACATGGCAGGGGAACCCAAACCC...GATCCAGTCACCACCTATTTCCTGAGGAGTCTGACTGTGCTCTTGTGGACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 |
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| CDS-3UTR TCA 90 bp | TCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGCCCTGCGTGTGGTGGTaGCAGCCACTCTGGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: SFSFFHVAQFLLSSFGLLPCVWW*QPLWDV Trigger: AACGTCCCAGAGTGGCTGTCACCACCACACGCAGGG...CAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | ATTGTGAAACCATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTGAGGCTGGCCTGCGATaGCCCTGGCGTTTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IVKPSFSFFHVAQFLLSSEAGLR*PWRFLQ Trigger: CTGGAGAAAACGCCAGGGTCATCGCAGGCCAGCCTC...AGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGATGGTTTCACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS-3UTR GCA 90 bp | CAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGCCTCCATCAGCTTCTTaGCCTCCTTCAGCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QDNLFLISLLLVHESWKLPPSAS*PPSAGS Trigger: GGAGCCTGCTGAAGGAGGGCAAGAAGCTGATGGAGG...CAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | ATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCACAAAAGCCTGTACAGGGCTaGCAGGGGTCTCTTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: IFSLSVYFSSMSPGSCPQKPVQG*QGSLTS Trigger: GGAAGTAAGAGACCCCTGTCAGCCCTGTACAGGCTT...TTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | TTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACCCTGCGTGTGGTGGTaGCAGCCACTCTGGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: FLIFPRGTVSPFFFWTIVPCVWW*QPLWDV Trigger: AACGTCCCAGAGTGGCTGTCACCACCACACGCAGGG...TACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
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| CDS-3UTR GCA 90 bp | GATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTGTTTTCTCCAGCCACTaGGGCTCTTGCATGACGCTC | + |
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Preference number: 4 (lower is better) Translates to: DHSFQLISVKHAHRSNQSVFSSH*GSCMTL Trigger: GAGCGTCATGCAAGAGCCGCAGTGGCTGGAGAAAAC...ACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS-3UTR CCA 90 bp | CAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGCAGCAGGCTCCTCTGTaGAGTGGTCTGCATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QDNLFLISLLLVHESWKLQQAPL*SGLHSL Trigger: CAGAGAATGCAGACCACTCCACAGAGGAGCCTGCTG...CAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | GAAATGGTATTTCTAAAAGTGAACAACACTGTCCGTATGATTGGAGCTTTTACACCCTGCGTGTGGTGGTaGCAGCCACTCTGGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: EMVFLKVNNTVRMIGAFTPCVWW*QPLWDV Trigger: AACGTCCCAGAGTGGCTGTCACCACCACACGCAGGG...TGTAAAAGCTCCAATCATACGGACAGTGTTGTTCACTTTTAGAAATACCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | ACCATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTGTTCCCCTGCCATGTTaGTATCAAGAGGCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TIFLIFPRGTVSPFFFWTVPLPC*YQEAGL Trigger: CAGGCCAGCCTCTTGATATCAACATGGCAGGGGAAC...AGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS-3UTR GCA 90 bp | CAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGAGCCACTGCGGCTCTTaGATGACGCTCACTCATGTA | + |
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Preference number: 4 (lower is better) Translates to: QDNLFLISLLLVHESWKLSHCGS*MTLTHV Trigger: TACATGAGTGAGCGTCATGCAAGAGCCGCAGTGGCT...CAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS-3UTR GCA 90 bp | CATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTCCTGGGTTTGGGTTCCCCTaGCATGTTGATATCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HSFQLISVKHAHRSNQSPGFGFP*HVDIKR Trigger: CCTCTTGATATCAACATGGCAGGGGAACCCAAACCC...AGGACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS-3UTR CCA 90 bp | CAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGGGCTCCTCTGTGGAGTaGTCTGCATTCTCTGACACA | + |
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Preference number: 4 (lower is better) Translates to: QDNLFLISLLLVHESWKLGSSVE*SAFSDT Trigger: TGTGTCAGAGAATGCAGACCACTCCACAGAGGAGCC...CAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
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| CDS-3UTR TCA 90 bp | AATACACATTCTCTGAATGTGATTTGGATGGTGACTTCTGTCAAGAATGCAGAGAAGCCTGTACAGGGCTaGCAGGGGTCTCTTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: NTHSLNVIWMVTSVKNAEKPVQG*QGSLTS Trigger: GGAAGTAAGAGACCCCTGTCAGCCCTGTACAGGCTT...CTCTGCATTCTTGACAGAAGTCACCATCCAAATCACATTCAGAGAATGTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGGAAATAGGTGGTGACTGGATCATTCATTTCAGCTCATTAGCGTCAAGCTATATCTCTGATGCCTaGGTTTGCTCCTGTACATGG | + |
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Preference number: 4 (lower is better) Translates to: PQEIGGDWIIHFSSLASSYISDA*VCSCTW Trigger: CCATGTACAGGAGCAAACGCAGGCATCAGAGATATA...GCTTGACGCTAATGAGCTGAAATGAATGATCCAGTCACCACCTATTTCCTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 |
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| CDS-3UTR GCA 90 bp | AAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTCCTCCATCAGCTTCTTaGCCTCCTTCAGCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTIAKSIWNIQCLGMEDSPPSAS*PPSAGS Trigger: GGAGCCTGCTGAAGGAGGGCAAGAAGCTGATGGAGG...AGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR CCA 90 bp | CATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTCCTCTTACTTCCAGGCTTTaGTCTGTAGGGTTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSFQLISVKHAHRSNQSPLTSRL*SVGFGF Trigger: GAACCCAAACCCTACAGACCAAAGCCTGGAAGTAAG...AGGACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR CCA 90 bp | CTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGGCTCCTCTGTGGAGTaGTCTGCATTCTCTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LHKTIAKSIWNIQCLGMEGSSVE*SAFSDT Trigger: TGTGTCAGAGAATGCAGACCACTCCACAGAGGAGCC...CTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR CCA 90 bp | AAACCATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACAGCAGGCTCCTCTGTaGAGTGGTCTGCATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPSFSFFHVAQFLLSSFGQQAPL*SGLHSL Trigger: CAGAGAATGCAGACCACTCCACAGAGGAGCCTGCTG...TCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGATGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTAAGCCTGTACAGGGCTaGCAGGGGTCTCTTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLIFPRGTVSPFFFWTIKPVQG*QGSLTS Trigger: GGAAGTAAGAGACCCCTGTCAGCCCTGTACAGGCTT...AATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | TCCACTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATCAGGAATGGCTCCTTTaGTTCAAGCCTGTACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STAQDNSQEYLEYTMLGNQEWLL*FKPVQG Trigger: GCCCTGTACAGGCTTGAATCAAAGGAGCCATTCCTG...ATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCACAAGTGGTCTGCATTCTCTaGCACACATTCGTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSVYFSSMSPGSCPQVVCIL*HTFVLD Trigger: ATCCAAGACGAATGTGTGTCAGAGAATGCAGACCAC...TTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | CTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACTGTAGAAACAGCTCGTaGCCCCCATCTTCATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIFPRGTVSPFFFWTIVHCRNSS*PPSSSK Trigger: CTTCGATGAAGATGGGGGTCACGAGCTGTTTCTACA...GTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCACAACTTACTTCCAGGCTTTaGTCTGTAGGGTTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSVYFSSMSPGSCPQLTSRL*SVGFGF Trigger: GAACCCAAACCCTACAGACCAAAGCCTGGAAGTAAG...TTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | TCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACTTGTAGAAACAGCTCGTaGCCCCCATCTTCATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFFHVAQFLLSSFGLLYTCRNSS*PPSSSK Trigger: CTTCGATGAAGATGGGGGTCACGAGCTGTTTCTACA...AGTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | GATCATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTTATATCTCTGATGCCTaGGTTTGCTCCTGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: DHSFQLISVKHAHRSNQSYISDA*VCSCTW Trigger: CCATGTACAGGAGCAAACGCAGGCATCAGAGATATA...ACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTCCTTCATTTTCTGCTTCTGCCTTTTaGTGCTTCTCAATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQLISVKHAHRSNQSPSFSASAF*CFSIFS Trigger: GGAGAAGATTGAGAAGCAGCAAAAGGCAGAAGCAGA...AAATGAAGGACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR CCA 90 bp | CTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACCTTACTTCCAGGCTTTaGTCTGTAGGGTTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIFPRGTVSPFFFWTIVHLTSRL*SVGFGF Trigger: GAACCCAAACCCTACAGACCAAAGCCTGGAAGTAAG...GTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | TCCACTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATCGCTCACTCATGTACTaGACGAAAGCATACCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STAQDNSQEYLEYTMLGNRSLMY*TKAYPL Trigger: CAAAGGGTATGCTTTCGTTCAGTACATGAGTGAGCG...ATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | TCCACTGCACAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGGTTTGGGTTCCCCTaGCATGTTGATATATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STAQDNSQEYLEYTMLGNGFGFP*HVDISL Trigger: CAGAGATATATCAACATGGCAGGGGAACCCAAACCC...ATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTGTGCAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTGAGGAGTCTGCTTCTGCCTTTTaGTGCTTCTCAATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAKSIWNIQCLGMEDSEESASAF*CFSIFS Trigger: GGAGAAGATTGAGAAGCAGCAAAAGGCAGAAGCAGA...CTCCTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | ATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTGAGGAGACTGCTTCTGCCTTTTaGTGCTTCTCAATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAKSIWNIQCLGMEDSEETASAF*CFSIFS Trigger: GGAGAAGATTGAGAAGCAGCAAAAGGCAGAAGCAGT...CTCCTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171075.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACTCTTACTTCCAGGCTTTaGTCTGTAGGGTTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFFHVAQFLLSSFGLLYTLTSRL*SVGFGF Trigger: GAACCCAAACCCTACAGACCAAAGCCTGGAAGTAAG...AGTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
||
| CDS-3UTR CCA 90 bp | ATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTGAGGAGGACACACATTCGTCTTaGATCAGCTCTATACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAKSIWNIQCLGMEDSEEDTHSS*ISSILS Trigger: GGAGAGTATAGAGCTGATCCAAGACGAATGTGTGTC...CTCCTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTGGTCTGCATTCTCTaGCACACATTCGTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFLIFPRGTVSPFFFWTIVVCIL*HTFVLD Trigger: ATCCAAGACGAATGTGTGTCAGAGAATGCAGACCAC...AATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | TCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACTCTTCTTCTGAGCTTCTaGTTCTGCCTTTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFFHVAQFLLSSFGLLYTLLLSF*FCLLLL Trigger: AAGCAGCAAAAGGCAGAAGCAGAAGCTCAGAAGAAG...AGTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACCTTCTTCTGAGCTTCTaGTTCTGCCTTTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFFHVAQFLLSSFGLLYLLLSF*FCLLLL Trigger: AAGCAGCAAAAGGCAGAAGCAGAAGCTCAGAAGAAG...GTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTATATATCTCTGATGCCTaGGTTTGCTCCTGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLIFPRGTVSPFFFWTIVYISDA*VCSCTW Trigger: CCATGTACAGGAGCAAACGCAGGCATCAGAGATATA...TACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 |
||
| CDS-3UTR GCA 90 bp | ATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTACTGCTTCTGCCTTTTaGTGCTTCTCAATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLIFPRGTVSPFFFWTITASAF*CFSIFS Trigger: GGAGAAGATTGAGAAGCAGCAAAAGGCAGAAGCAGT...AATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000171075.8 ENSMUST00000192209.6 |
||
| 3UTR CAA 72 bp | ACTGTCCGTATGATTGGAGCTTTTACATCAACTGAATaGGAGATGTTGCTGTCCATTGTGAAACCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVRMIGAFTSTE*EMLLSIVKPSF Trigger: GAAAGATGGTTTCACAATGGACAGCAACATCTCCAATTCAGTTGATGTAAAAGCTCCAATCATACGGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| 3UTR CAA 72 bp | TATTCAGAAGAGCAATACACATTCTCTGAATGTGATTaGGATGGTGACTTCTGTCAAGAATGCAGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YSEEQYTFSECD*DGDFCQECRAI Trigger: GATGGCTCTGCATTCTTGACAGAAGTCACCATCCAAATCACATTCAGAGAATGTGTATTGCTCTTCTGAATA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
||
| CDS-3UTR TCA 90 bp | CCTATGACATTGTTGGAAACAAGCTTTAAGTGTAGGATTGCAACACTACATGACCAATGTCGACCTTTTTaGCGATGGCTGTATTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PMTLLETSFKCRIATLHDQCRPF*RWLYSN Trigger: ATTTGAATACAGCCATCGTCAAAAAGGTCGACATTG...GTCATGTAGTGTTGCAATCCTACACTTAAAGCTTGTTTCCAACAATGTCATAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
||
| CDS-3UTR GCA 90 bp | CTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACTTTATCTGTAGAAACTaGTTCTGCCTTTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIFPRGTVSPFFFWTIVHFICRN*FCLLLL Trigger: AAGCAGCAAAAGGCAGAAGCAGTTTCTACAGATAAA...GTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000171075.8 ENSMUST00000192209.6 |
||
| CDS-3UTR GCA 90 bp | TCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACACTTTTATCTGTAGAAACTaGTTCTGCCTTTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFFHVAQFLLSSFGLLYTFICRN*FCLLLL Trigger: AAGCAGCAAAAGGCAGAAGCAGTTTCTACAGATAAA...AGTGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000171075.8 ENSMUST00000192209.6 |
||
| 3UTR CAA 72 bp | ATGATTGGAGCTTTTACATCAACTGAATTGGAGATGTaGCTGTCCATTGTGAAACCATCTTTCTCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MIGAFTSTELEM*LSIVKPSFSFF Trigger: GAAAAATGAGAAAGATGGTTTCACAATGGACAGCAACATCTCCAATTCAGTTGATGTAAAAGCTCCAATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| 3UTR CAA 72 bp | ACTTCTGTCAAGAATGCAGAGCCATCTGATTTTCTTTaGTACAGTAAGTTAATGTATGTTCAAACACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSVKNAEPSDFL*YSKLMYVQTQA Trigger: TGCCTGTGTTTGAACATACATTAACTTACTGTACAAAAGAAAATCAGATGGCTCTGCATTCTTGACAGAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
||
| CDS CCA 90 bp | TTTGCCCCTGCGTGTGGTGGTGACAGCCACTCTGGGACGTTTGAGTaGGATGACAGCTCGAGGAGGCGGAGGTACACGGCCATGGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: FAPACGGDSHSGTFE*DDSSRRRRYTAMVI Trigger: GATTACCATGGCCGTGTACCTCCGCCTCCTCGAGCTGTCATCCCACTCAAACGTCCCAGAGTGGCTGTCACCACCACACGCAGGGGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
||
| CDS GCA 90 bp | GGGTCTCTTACTTCCAGGCTTTGGTCTGTAGGGTTTGGGTTCCCCTaGCATGTTGATATCAAGAGGCTGGCCTGCGATGACCCTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLTSRLWSVGFGFP*HVDIKRLACDDPGV Trigger: AACGCCAGGGTCATCGCAGGCCAGCCTCTTGATATCAACATGGCAGGGGAACCCAAACCCTACAGACCAAAGCCTGGAAGTAAGAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193117.3 ENSMUST00000211860.2 |
||
| CDS GCA 90 bp | AACAAGAGGCTGGCCTGCGATGACCCTGGCGTTTTCTCCAGCCACTaGGGCTCTTGCATGACGCTCACTCATGTACTGAACGAAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: NKRLACDDPGVFSSH*GSCMTLTHVLNESI Trigger: TATGCTTTCGTTCAGTACATGAGTGAGCGTCATGCAAGAGCCGCAGTGGCTGGAGAAAACGCCAGGGTCATCGCAGGCCAGCCTCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108373.4 |
||
| CDS GCA 90 bp | ATCAAGAGGCTGGCCTGCGATGACCCTGGCGTTTTCTCCAGCCACTaGGGCTCTTGCATGACGCTCACTCATGTACTGAACGAAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: IKRLACDDPGVFSSH*GSCMTLTHVLNESI Trigger: TATGCTTTCGTTCAGTACATGAGTGAGCGTCATGCAAGAGCCGCAGTGGCTGGAGAAAACGCCAGGGTCATCGCAGGCCAGCCTCTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193117.3 ENSMUST00000211860.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCACAAATGGAAAAGACGCCTTaGCCCCTGCGTGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IFSLSVYFSSMSPGSCPQMEKTP*PLRVVV Trigger: CACCACCACACGCAGGGGCAAAGGCGTCTTTTCCAT...TTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | CAAGACAATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCTCCATCAGCTTCTaGCCCTCCTTCAGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QDNLFLISLLLVHESWKLSSISF*PSFSRL Trigger: GAGCCTGCTGAAGGAGGGCAAGAAGCTGATGGAGGA...CAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGATTGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | ATTGTGAAACCATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTCCTCCATCAGCTTCTaGCCCTCCTTCAGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IVKPSFSFFHVAQFLLSSSSISF*PSFSRL Trigger: GAGCCTGCTGAAGGAGGGCAAGAAGCTGATGGAGGA...AGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGATGGTTTCACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTCAGCCACTGCGGCTCTaGCATGACGCTCACTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHFSTWHSFSFLLLDYCQPLRL*HDAHSC Trigger: ACATGAGTGAGCGTCATGCAAGAGCCGCAGTGGCTG...ACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | CATTCATTTCAGCTCATTAGCGTCAAGCATGCTCACAGGTCAAACCAAAGTCCTTCTTACTTCCAGGCTTaGGTCTGTAGGGTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSFQLISVKHAHRSNQSPSYFQA*VCRVWV Trigger: AACCCAAACCCTACAGACCAAAGCCTGGAAGTAAGA...AGGACTTTGGTTTGACCTGTGAGCATGCTTGACGCTAATGAGCTGAAATGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | ATCTTTTCCTTATCAGTTTACTTCTCGTCCATGAGTCCTGGAAGCTGTCCACAATCTTACTTCCAGGCTTaGGTCTGTAGGGTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IFSLSVYFSSMSPGSCPQSYFQA*VCRVWV Trigger: AACCCAAACCCTACAGACCAAAGCCTGGAAGTAAGA...TTGTGGACAGCTTCCAGGACTCATGGACGAGAAGTAAACTGATAAGGAAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | AAACCATCTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGATCTTACTTCCAGGCTTaGGTCTGTAGGGTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPSFSFFHVAQFLLSSFGSYFQA*VCRVWV Trigger: AACCCAAACCCTACAGACCAAAGCCTGGAAGTAAGA...TCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAGATGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000193117.3 |
||
| CDS-3UTR CAA 90 bp | TCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTACATCTTACTTCCAGGCTTaGGTCTGTAGGGTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHFSTWHSFSFLLLDYCTSYFQA*VCRVWV Trigger: AACCCAAACCCTACAGACCAAAGCCTGGAAGTAAGA...TGTACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
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| CDS-3UTR CAA 90 bp | AATACACATTCTCTGAATGTGATTTGGATGGTGACTTCTGTCAAGAATGCAGAGTATACTCTCCTCCAATaGCTTCTTCTGAGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: NTHSLNVIWMVTSVKNAEYTLLQ*LLLSFC Trigger: GCAGAAGCTCAGAAGAAGCAATTGGAGGAGAGTATA...CTCTGCATTCTTGACAGAAGTCACCATCCAAATCACATTCAGAGAATGTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108372.4 |
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| CDS-3UTR CAA 90 bp | CAAGACAATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTATACTCTCCTCCAATaGCTTCTTCTGAGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: QDNSQEYLEYTMLGNGGFYTLLQ*LLLSFC Trigger: GCAGAAGCTCAGAAGAAGCAATTGGAGGAGAGTATA...GAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTATTGTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
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| CDS-3UTR CAA 90 bp | ATAGCCAAGAGTATTTGGAATATACAATGCTTGGGAATGGAGGATTCTGAGGAGTTGGGGTCATTCTTATaGGTAATGTTGCTTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: IAKSIWNIQCLGMEDSEELGSFL*VMLLVC Trigger: ACAAACAAGCAACATTACCAATAAGAATGACCCCAA...CTCCTCAGAATCCTCCATTCCCAAGCATTGTATATTCCAAATACTCTTGGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATTTTTCCACGTGGCACAGTTTCTCCTTTCTTCTTTTGGACTATTGTTTCTTATTGGTAATGTaGCTTGTTTGTGTTTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LSHFSTWHSFSFLLLDYCFLLVM*LVCVLP Trigger: GGGCAAAACACAAACAAGCAACATTACCAATAAGAA...ACAATAGTCCAAAAGAAGAAAGGAGAAACTGTGCCACGTGGAAAAATGAGAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193117.3 |
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| CDS CCA 72 bp | GCGTGTGGTGGTGACAGCCACTCTGGGACGTTTGAGTaGGATGACAGCTCGAGGAGGCGGAGGTACACGGCC | + |
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Preference number: 6 (lower is better) Translates to: ACGGDSHSGTFE*DDSSRRRRYTA Trigger: GGCCGTGTACCTCCGCCTCCTCGAGCTGTCATCCCACTCAAACGTCCCAGAGTGGCTGTCACCACCACACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
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| CDS CAA 90 bp | ACGCCTTTGCCCCTGCGTGTGGTGGTGACAGCCACTCTGGGACGTTaGAGTGGGATGACAGCTCGAGGAGGCGGAGGTACACGGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: TPLPLRVVVTATLGR*SGMTARGGGGTRPW Trigger: CCATGGCCGTGTACCTCCGCCTCCTCGAGCTGTCATCCCACTCAAACGTCCCAGAGTGGCTGTCACCACCACACGCAGGGGCAAAGGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
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| CDS CAA 72 bp | CCCCTGCGTGTGGTGGTGACAGCCACTCTGGGACGTTaGAGTGGGATGACAGCTCGAGGAGGCGGAGGTACA | + |
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Preference number: 6 (lower is better) Translates to: PLRVVVTATLGR*SGMTARGGGGT Trigger: TGTACCTCCGCCTCCTCGAGCTGTCATCCCACTCAAACGTCCCAGAGTGGCTGTCACCACCACACGCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000171075.8 ENSMUST00000192209.6 ENSMUST00000193117.3 |
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| CDS GCA 72 bp | GGGTTCCCCTGCCATGTTGATATCAAGAGGCTGGCCTaGGATGACCCTGGCGTTTTCTCCAGCCACTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GFPCHVDIKRLA*DDPGVFSSHCG Trigger: GCCGCAGTGGCTGGAGAAAACGCCAGGGTCATCGCAGGCCAGCCTCTTGATATCAACATGGCAGGGGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193117.3 ENSMUST00000211860.2 |
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| CDS GCA 72 bp | CTGGCCTGCGATGACCCTGGCGTTTTCTCCAGCCACTaGGGCTCTTGCATGACGCTCACTCATGTACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LACDDPGVFSSH*GSCMTLTHVLN Trigger: GTTCAGTACATGAGTGAGCGTCATGCAAGAGCCGCAGTGGCTGGAGAAAACGCCAGGGTCATCGCAGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108373.4 ENSMUST00000191806.3 ENSMUST00000193117.3 ENSMUST00000211860.2 |
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| CDS GCA 72 bp | ACTTCCAGGCTTTGGTCTGTAGGGTTTGGGTTCCCCTaGCATGTTGATATCAAGAGGCTGGCCTGCGATGAC | + |
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Preference number: 6 (lower is better) Translates to: TSRLWSVGFGFP*HVDIKRLACDD Trigger: GTCATCGCAGGCCAGCCTCTTGATATCAACATGGCAGGGGAACCCAAACCCTACAGACCAAAGCCTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193117.3 ENSMUST00000211860.2 |
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| CDS CAA 72 bp | CAAATACGTAACCACCAACAGACAGGAATGGCTCCTTaGATTCAAGCCTGTACAGGGCTGACAGGGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QIRNHQQTGMAP*IQACTGLTGVS Trigger: AGAGACCCCTGTCAGCCCTGTACAGGCTTGAATCAAAGGAGCCATTCCTGTCTGTTGGTGGTTACGTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000192209.6 ENSMUST00000193117.3 ENSMUST00000211860.2 |
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| CDS CAA 90 bp | AATCGTAGTCAAATACGTAACCACCAACAGACAGGAATGGCTCCTTaGATTCAAGCCTGTACAGGGCTGACAGGGGTCTCTTACTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: NRSQIRNHQQTGMAP*IQACTGLTGVSYFQ Trigger: CTGGAAGTAAGAGACCCCTGTCAGCCCTGTACAGGCTTGAATCAAAGGAGCCATTCCTGTCTGTTGGTGGTTACGTATTTGACTACGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108372.4 ENSMUST00000192209.6 ENSMUST00000193117.3 ENSMUST00000211860.2 |
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| CDS GCA 72 bp | CATATCACTTTATCTGTAGAAACTGCTTCTGCCTTTTaGTGCTTCTCAATCTTCTCCAGGCGCCCCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: HITLSVETASAF*CFSIFSRRPSK Trigger: CTTGCTGGGGCGCCTGGAGAAGATTGAGAAGCAGCAAAAGGCAGAAGCAGTTTCTACAGATAAAGTGATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171075.8 ENSMUST00000192209.6 |
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| CDS CCA 72 bp | GTGGAGTGGTCTGCATTCTCTGACACACATTCGTCTTaGATCAGCTCTATACTCTCCTCCAATTGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VEWSAFSDTHSS*ISSILSSNCFF Trigger: GAAGAAGCAATTGGAGGAGAGTATAGAGCTGATCCAAGACGAATGTGTGTCAGAGAATGCAGACCACTCCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108372.4 ENSMUST00000193117.3 |
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