Pregenerated sensors for RALY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027593Ensembl transcript IDs: ENSMUST00000029120.14, ENSMUST00000058089.13, ENSMUST00000109701.10, ENSMUST00000116389.9, ENSMUST00000125872.8, ENSMUST00000129137.8, ENSMUST00000140713.3
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAGTAACTCCACTTGCAAAGGATGTAGCACTCACTGGCTAGGATaGATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCTGGTACCCG | + |
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Preference number: 1 (lower is better) Translates to: ASNSTCKGCSTHWLG*MGRELLLPAFLWYP Trigger: CGGGTACCAGAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCCTTTGCAAGTGGAGTTACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR CCA 90 bp | GTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATaGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: VFLPLGPGSADRKNA*GKGRPVTPLAKDVA Trigger: TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGGCCTGGCTTGAGGCCTaGGACAGTGATGCCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QSVSAPWPRQCRQEECMGAWLEA*DSDALL Trigger: CAGAAGGGCATCACTGTCTCAGGCCTCAAGCCAGGC...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTGCCTGGCTTGAGGCCTaGGACAGTGATGCCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RVFLPLGPGSADRKNAWGAWLEA*DSDALL Trigger: CAGAAGGGCATCACTGTCTCAGGCCTCAAGCCAGGC...ACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGACTGGCATCCAGAGATaGGTGCCTGGCTTGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QSVSAPWPRQCRQEECMGTGIQR*VPGLRP Trigger: AGGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGT...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAACTGGCATCCAGAGATaGGTGCCTGGCTTGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GEEEQSVSAPWPRQCRQETGIQR*VPGLRP Trigger: AGGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGT...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTAACTGGCATCCAGAGATaGGTGCCTGGCTTGAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ECFCPLAQAVQTGRMHGVTGIQR*VPGLRP Trigger: AGGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGT...TACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGAGGAGAGAGTTACTGCTaGCAGCTTTCCTCTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRGESYC*QLSSGT Trigger: GGTACCAGAGGAAAGCTGGCAGCAGTAACTCTCTCC...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAGAGAGTTACTGCTaGCAGCTTTCCTCTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: SWGRRAECFCPLAQAVQTGESYC*QLSSGT Trigger: GGTACCAGAGGAAAGCTGGCAGCAGTAACTCTCTCC...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGGGAGAGAGTTACTGCTaGCAGCTTTCCTCTGGTACC | + |
|
Preference number: 2 (lower is better) Translates to: QSVSAPWPRQCRQEECMGGESYC*QLSSGT Trigger: GGTACCAGAGGAAAGCTGGCAGCAGTAACTCTCTCC...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTTGGGGAGAGAGTTACTaGTGCCAGCTTTCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GNVLGKKSRVFLPLGPGSWGESY*CQLSSG Trigger: ACCAGAGGAAAGCTGGCAGCAGTAACTCTCTCCCCA...ACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAACTCACTGGCTAGGATaGATGGGGAGAGAGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: GEEEQSVSAPWPRQCRQETHWLG*MGRELL Trigger: CAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGT...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGACTCACTGGCTAGGATaGATGGGGAGAGAGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: SLGMSWGRRAECFCPLAQTHWLG*MGRELL Trigger: CAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGT...CTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGACTCACTGGCTAGGATaGATGGGGAGAGAGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: QSVSAPWPRQCRQEECMGTHWLG*MGRELL Trigger: CAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGT...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCAGCCTGGCTTGAGGCCTaGGACAGTGATGCCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAAWLEA*DSDALL Trigger: CAGAAGGGCATCACTGTCTCAGGCCTCAAGCCAGGC...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCAACTGGCATCCAGAGATaGGTGCCTGGCTTGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KNAWGKGRPVTPLAKDVATGIQR*VPGLRP Trigger: AGGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGT...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCATGGGGAGAGAGTTACTaGTGCCAGCTTTCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAWGESY*CQLSSG Trigger: ACCAGAGGAAAGCTGGCAGCAGTAACTCTCTCCCCA...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTCAGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTCCTTGGCCCAGGCAGTaGAGACAGGAAGAATGCATG | + |
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Preference number: 2 (lower is better) Translates to: HLRAYLDPISLLSGSSHPPWPRQ*RQEECM Trigger: CATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGG...AGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCTGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
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| 3UTR GCA 72 bp | CTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTaGCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: LGMSWGRRAECF*PLAQAVQTGRM Trigger: CATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR CCA 72 bp | CCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATaGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: PLGPGSADRKNA*GKGRPVTPLAK Trigger: CTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR GCA 72 bp | TCCACTTGCAAAGGATGTAGCACTCACTGGCTAGGATaGATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: STCKGCSTHWLG*MGRELLLPAFL Trigger: GAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCCTTTGCAAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR CCA 72 bp | GCCAGTAACTCCACTTGCAAAGGATGTAGCACTCACTaGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: ASNSTCKGCSTH*LGCMGRELLLP Trigger: TGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCCTTTGCAAGTGGAGTTACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACATGCTGCAGCTCCCGCTaGCGCCGCTGCTGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: SWGRRAECFCPLAQAVQTCCSSR*RRCCHH Trigger: GTGGTGGCAGCAGCGGCGGCAGCGGGAGCTGCAGCA...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | CTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCATGCTGCAGCTCCCGCTaGCGCCGCTGCTGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LGMSWGRRAECFCPLAQACCSSR*RRCCHH Trigger: GTGGTGGCAGCAGCGGCGGCAGCGGGAGCTGCAGCA...TGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGTAGCCGGCTGCTGCTaGTGCAGCTCCCGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SLGMSWGRRAECFCPLAQVAGCC*CSSRCR Trigger: GCGGCAGCGGGAGCTGCAGCAGCAGCAGCCGGCTAC...CTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTTGCTGCAGCTCCCGCTaGCGCCGCTGCTGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: RVFLPLGPGSADRKNAWGCCSSR*RRCCHH Trigger: GTGGTGGCAGCAGCGGCGGCAGCGGGAGCTGCAGCA...ACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | GCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCTCTCCCAGCACAGCTaGCCGGGCATGGCGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: AWECPGEEEQSVSAPWPRLSQHS*PGMALI Trigger: AATGAGCGCCATGCCCGGGCAGCTGTGCTGGGAGAG...CCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGTCCCGCTGCCGCCGCTaGTGCCACCACCAACATTGC | + |
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Preference number: 4 (lower is better) Translates to: AECFCPLAQAVQTGRMHGSRCRR*CHHQHC Trigger: GCAATGTTGGTGGTGGCAGCAGCGGCGGCAGCGGGA...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGATCCCGCTGCCGCCGCTaGTGCCACCACCAACATTGC | + |
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Preference number: 4 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRSRCRR*CHHQHC Trigger: GCAATGTTGGTGGTGGCAGCAGCGGCGGCAGCGGGA...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | GGATGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTGCTGCAGCTCCCGCTaGCGCCGCTGCTGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: GCSTHWLGCMGRELLLPACCSSR*RRCCHH Trigger: GTGGTGGCAGCAGCGGCGGCAGCGGGAGCTGCAGCA...AGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCGTAGCCGGCTGCTGCTaGTGCAGCTCCCGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: STHWLGCMGRELLLPAFLVAGCC*CSSRCR Trigger: GCGGCAGCGGGAGCTGCAGCAGCAGCAGCCGGCTAC...GAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCGCTGGTAGCCGGCTaGTGCTGCTGCAGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FPLVPAIDWHPEMGAWLEALVAG*CCCSSR Trigger: GCGGGAGCTGCAGCAGCAGCAGCCGGCTACCAGCGC...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCGCGCTGGTAGCCGGCTaGTGCTGCTGCAGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: STHWLGCMGRELLLPAFLALVAG*CCCSSR Trigger: GCGGGAGCTGCAGCAGCAGCAGCCGGCTACCAGCGC...GAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGTCGCTTCACCGGAACTaGCCTGGGCACAGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: AECFCPLAQAVQTGRMHGSLHRN*PGHRHW Trigger: CCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGA...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGATCGCTTCACCGGAACTaGCCTGGGCACAGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRSLHRN*PGHRHW Trigger: CCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGA...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | CTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCATCGCTTCACCGGAACTaGCCTGGGCACAGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LGMSWGRRAECFCPLAQASLHRN*PGHRHW Trigger: CCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGA...TGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCGCGCTGGTAGCCGGCTaGTGCTGCTGCAGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: CSTHWLGCMGRELLLPAFALVAG*CCCSSR Trigger: GCGGGAGCTGCAGCAGCAGCAGCCGGCTACCAGCGC...GAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTCTCTCCCAGCACAGCTaGCCGGGCATGGCGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: RVFLPLGPGSADRKNAWGLSQHS*PGMALI Trigger: AATGAGCGCCATGCCCGGGCAGCTGTGCTGGGAGAG...ACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGTCGCTTCACCGGAACTaGCCTGGGCACAGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: SRVFLPLGPGSADRKNAWSLHRN*PGHRHW Trigger: CCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGA...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCTCCCGCTGCCGCCGCTaGTGCCACCACCAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: STHWLGCMGRELLLPAFLSRCRR*CHHQHC Trigger: GCAATGTTGGTGGTGGCAGCAGCGGCGGCAGCGGGA...GAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGACAGGAAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAGTAGCCGGCTGCTGCTaGTGCAGCTCCCGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SADRKNAWGKGRPVTPLAVAGCC*CSSRCR Trigger: GCGGCAGCGGGAGCTGCAGCAGCAGCAGCCGGCTAC...TGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTTCCTGTCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGACAGGAAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAGCGCTGGTAGCCGGCTaGTGCTGCTGCAGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SADRKNAWGKGRPVTPLAALVAG*CCCSSR Trigger: GCGGGAGCTGCAGCAGCAGCAGCCGGCTACCAGCGC...TGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTTCCTGTCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCTCCTTGGGGTGTGCCTaGCTCAGAAGCCGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVPAIDWHPEMGAWLEASLGCA*LRSRVF Trigger: GAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGA...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGAACAGCTGCCCGGGCATaGCGCTCATTGGCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRTAARA*RSLAYW Trigger: CCAGTATGCCAATGAGCGCCATGCCCGGGCAGCTGT...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTACAGCTGCCCGGGCATaGCGCTCATTGGCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNVLGKKSRVFLPLGPGSTAARA*RSLAYW Trigger: CCAGTATGCCAATGAGCGCCATGCCCGGGCAGCTGT...ACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | GCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: ASFPLVPAIDWHPEMGAWPGHRH*RKAASI Trigger: TATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGG...CCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCTCACCGGAACTGCCCTaGGCACAGGCACTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLVPAIDWHPEMGAWLEASPELP*AQALEK Trigger: TTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGA...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCTCTGCATCTGTGTCCTaGCTGTGCTCCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLVPAIDWHPEMGAWLEASASVS*LCSSSS Trigger: GGAGGAGCTGGAGCACAGCCAGGACACAGATGCAGA...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCATCCTTGGGGTGTGCCTaGCTCAGAAGCCGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGMSWGRRAECFCPLAQASLGCA*LRSRVF Trigger: GAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGA...TGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGATCCTTGGGGTGTGCCTaGCTCAGAAGCCGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRSLGCA*LRSRVF Trigger: GAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGA...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTCTCCTTGGGGTGTaGCTGCCTCAGAAGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFPLVPAIDWHPEMGAWLLLGV*LPQKPC Trigger: ACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAG...CCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACTTCTCCTTGGGGTGTaGCTGCCTCAGAAGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRLLLGV*LPQKPC Trigger: ACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAG...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGCTTCTCCTTGGGGTGTaGCTGCCTCAGAAGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AECFCPLAQAVQTGRMHGLLLGV*LPQKPC Trigger: ACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAG...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SRVFLPLGPGSADRKNAWPGHRH*RKAASI Trigger: TATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGG...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAATCACCGGAACTGCCCTaGGCACAGGCACTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEEEQSVSAPWPRQCRQESPELP*AQALEK Trigger: TTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGA...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTTCTGCATCTGTGTCCTaGCTGTGCTCCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNVLGKKSRVFLPLGPGSSASVS*LCSSSS Trigger: GGAGGAGCTGGAGCACAGCCAGGACACAGATGCAGA...ACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACACTCCTCCTCCACCACTaGTGCTGTCACCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWGRRAECFCPLAQAVQTLLLHH*CCHPSS Trigger: AGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAGGAG...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTACAGCTGCCCGGGCATaGCGCTCATTGGCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAASFPLVPAIDWHPEMGTAARA*RSLAYW Trigger: CCAGTATGCCAATGAGCGCCATGCCCGGGCAGCTGT...ACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: TAASFPLVPAIDWHPEMGPGHRH*RKAASI Trigger: TATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGG...ACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: FPLVPAIDWHPEMGAWLEPGHRH*RKAASI Trigger: TATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGG...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCTCACCGGAACTGCCCTaGGCACAGGCACTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQLSSGTRYRLASRDGCSPELP*AQALEK Trigger: TTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGA...GCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | GCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGGTTTGGACTTCTCCTTaGGGTGTGCCTGCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AWECPGEEEQSVSAPWPRVWTSP*GVPASE Trigger: TTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAAC...CCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCTCTGCATCTGTGTCCTaGCTGTGCTCCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCQLSSGTRYRLASRDGCSASVS*LCSSSS Trigger: GGAGGAGCTGGAGCACAGCCAGGACACAGATGCAGA...GCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTCCTCCTCCACCACTaGTGCTGTCACCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCQLSSGTRYRLASRDGCLLLHH*CCHPSS Trigger: AGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAGGAG...GCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGCTCCTCCTCCACCACTaGTGCTGTCACCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRVFLPLGPGSADRKNAWLLLHH*CCHPSS Trigger: AGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAGGAG...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCTCCTTGGGGTGTGCCTaGCTCAGAAGCCGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STHWLGCMGRELLLPAFLSLGCA*LRSRVF Trigger: GAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGA...GAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACACAAGGCTCCATCTTCTaGATCTGTGTCCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWGRRAECFCPLAQAVQTQGSIF*ICVLAV Trigger: CACAGCCAGGACACAGATGCAGAAGATGGAGCCTTG...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR GCA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAACAAGGCTCCATCTTCTaGATCTGTGTCCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEEQSVSAPWPRQCRQEQGSIF*ICVLAV Trigger: CACAGCCAGGACACAGATGCAGAAGATGGAGCCTTG...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTTCACCGGAACTGCCCTaGGCACAGGCACTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAASFPLVPAIDWHPEMGSPELP*AQALEK Trigger: TTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGA...ACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| 3UTR CAA 72 bp | ATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTaGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSWGRRAECFCP*AQAVQTGRMHG Trigger: CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
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| CDS-3UTR TCA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGATGGTCTCCACATCTaGCTTCTTCACCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SWGRRAECFCPLAQAVQTDGLHI*LLHHSC Trigger: ACAGCTGTGGTGAAGAAGTCAGATGTGGAGACCATC...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGGATGGTCTCCACATCTaGCTTCTTCACCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFPLVPAIDWHPEMGAWDGLHI*LLHHSC Trigger: ACAGCTGTGGTGAAGAAGTCAGATGTGGAGACCATC...CCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAATGTCACCCTTCTTCTTaGCATCTGGGTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEEEQSVSAPWPRQCRQECHPSS*HLGWPS Trigger: AGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACA...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACATGTCACCCTTCTTCTTaGCATCTGGGTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWGRRAECFCPLAQAVQTCHPSS*HLGWPS Trigger: AGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACA...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGCTCCTCCTCCACCACTaGTGCTGTCACCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPLVPAIDWHPEMGAWLELLLHH*CCHPSS Trigger: AGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAGGAG...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGCAAGGCTCCATCTTCTaGATCTGTGTCCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRVFLPLGPGSADRKNAWQGSIF*ICVLAV Trigger: CACAGCCAGGACACAGATGCAGAAGATGGAGCCTTG...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGGGCATGGCGCTCATTaGCATACTGGACAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEEEQSVSAPWPRQCRQEGHGAH*HTGQKH Trigger: ATGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCC...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGGGGCATGGCGCTCATTaGCATACTGGACAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSVSAPWPRQCRQEECMGGHGAH*HTGQKH Trigger: ATGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCC...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGCTTCTTCTTGCCATCTaGGTTGGCCTTCTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AECFCPLAQAVQTGRMHGLLLAI*VGLLFL Trigger: GAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAG...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTCTTCTTGCCATCTaGGTTGGCCTTCTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASFPLVPAIDWHPEMGAWLLLAI*VGLLFL Trigger: GAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAG...CCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGCTTCTTCTTGCCATCTaGGTTGGCCTTCTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVSAPWPRQCRQEECMGLLLAI*VGLLFL Trigger: GAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAG...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGTGTCACCCTTCTTCTTaGCATCTGGGTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRVFLPLGPGSADRKNAWCHPSS*HLGWPS Trigger: AGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACA...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGCCACTCGGCCGTACTTaGAAAAGATGGTCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVFLPLGPGSADRKNAWPLGRT*KRWSPH Trigger: ATGTGGAGACCATCTTTTCCAAGTACGGCCGAGTGG...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | GGATGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTGTTTGGACTTCTCCTTaGGGTGTGCCTGCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSTHWLGCMGRELLLPAVWTSP*GVPASE Trigger: TTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAAC...AGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR TCA 90 bp | GGATGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTGATGGTCTCCACATCTaGCTTCTTCACCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSTHWLGCMGRELLLPADGLHI*LLHHSC Trigger: ACAGCTGTGGTGAAGAAGTCAGATGTGGAGACCATC...AGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | GGATGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTGTCACCCTTCTTCTTaGCATCTGGGTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSTHWLGCMGRELLLPACHPSS*HLGWPS Trigger: AGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACA...AGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTCTTCTTCTTGCCATCTaGGTTGGCCTTCTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAASFPLVPAIDWHPEMGLLLAI*VGLLFL Trigger: GAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAG...ACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCGATGGTCTCCACATCTaGCTTCTTCACCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSTHWLGCMGRELLLPAFDGLHI*LLHHSC Trigger: ACAGCTGTGGTGAAGAAGTCAGATGTGGAGACCATC...GAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGTCTTGTTGGTTACATTaGTGGTCTGAATCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWECPGEEEQSVSAPWPRSCWLH*WSESSR Trigger: CCTTGAAGATTCAGACCAGCAATGTAACCAACAAGA...CCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CACCTCAGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTACAGCTGCCCGGGCATaGCGCTCATTGGCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLRAYLDPISLLSGSSHPTAARA*RSLAYW Trigger: CCAGTATGCCAATGAGCGCCATGCCCGGGCAGCTGT...AGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCTGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGACAGGAAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAGTTTGGACTTCTCCTTaGGGTGTGCCTGCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SADRKNAWGKGRPVTPLAVWTSP*GVPASE Trigger: TTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAAC...TGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTTCCTGTCTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCATCTGCATCTGTGTCCTaGCTGTGCTCCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNAWGKGRPVTPLAKDVASASVS*LCSSSS Trigger: GGAGGAGCTGGAGCACAGCCAGGACACAGATGCAGA...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTTCCCACCTTCTCCTTGGGGTGTaGCTGCCTCAGAAGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAYLDPISLLSGSSHPSHLLLGV*LPQKPC Trigger: ACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAG...GTGGGAAGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCATGTTGGTTACATTGCTaGTCTGAATCTTCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGMSWGRRAECFCPLAQACWLHC*SESSRT Trigger: TGTCCTTGAAGATTCAGACCAGCAATGTAACCAACA...TGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTGTTGGTTACATTGCTaGTCTGAATCTTCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QSVSAPWPRQCRQEECMGCWLHC*SESSRT Trigger: TGTCCTTGAAGATTCAGACCAGCAATGTAACCAACA...CCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTATCTTGTTGGTTACATTaGTGGTCTGAATCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECFCPLAQAVQTGRMHGVSCWLH*WSESSR Trigger: CCTTGAAGATTCAGACCAGCAATGTAACCAACAAGA...TACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCAGTTTGGACTTCTCCTTaGGGTGTGCCTGCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAVWTSP*GVPASE Trigger: TTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAAC...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTTCCAAGGCTCCATCTTCTaGATCTGTGTCCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQSIFGSNLFIVRFLPPFQGSIF*ICVLAV Trigger: CACAGCCAGGACACAGATGCAGAAGATGGAGCCTTG...GAAGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGTGTTGGTTACATTGCTaGTCTGAATCTTCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FPLVPAIDWHPEMGAWLECWLHC*SESSRT Trigger: TGTCCTTGAAGATTCAGACCAGCAATGTAACCAACA...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCTCTTGTTGGTTACATTaGTGGTCTGAATCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSTHWLGCMGRELLLPAFSCWLH*WSESSR Trigger: CCTTGAAGATTCAGACCAGCAATGTAACCAACAAGA...GAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTTCCCACGGGCATGGCGCTCATTaGCATACTGGACAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAYLDPISLLSGSSHPSHGHGAH*HTGQKH Trigger: ATGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCC...GTGGGAAGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS-3UTR TCA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCACATCGATGTTGGACTTaGTCTGTGTCAGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAHRCWT*SVSALF Trigger: AAACAGAGCTGACACAGATCAAGTCCAACATCGATG...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTTCTGTTGGTTACATTGCTaGTCTGAATCTTCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PQSIFGSNLFIVRFLPPFCWLHC*SESSRT Trigger: TGTCCTTGAAGATTCAGACCAGCAATGTAACCAACA...GAAGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS GCA 90 bp | CCTCCTCATCACCATCATCTCGAGTTTGGACTTCTCCTTGGGGTGTaGCTGCCTCAGAAGCCGTGTCTTCTTGGGGCGCTGGTAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPHHHHLEFGLLLGV*LPQKPCLLGALVAG Trigger: GCCGGCTACCAGCGCCCCAAGAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAACTCGAGATGATGGTGATGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACTGCCACCACCAACATaGCTACTGCCGCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRLPPPT*LLPPPP Trigger: TGGTGGAGGCGGCAGTAGCAATGTTGGTGGTGGCAG...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAACTGCCACCACCAACATaGCTACTGCCGCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GEEEQSVSAPWPRQCRQELPPPT*LLPPPP Trigger: TGGTGGAGGCGGCAGTAGCAATGTTGGTGGTGGCAG...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS GCA 90 bp | ACGGCGAACCAAAGGGACTGTAACACGGGGTCGCTTCACCGGAACTaGCCTGGGCACAGGCACTGGAGAAAGGCGGCCTCGATAATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TANQRDCNTGSLHRN*PGHRHWRKAASIIK Trigger: TTTGATTATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGACCCCGTGTTACAGTCCCTTTGGTTCGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000125872.8 ENSMUST00000129137.8 ENSMUST00000140713.3 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCGGGCATGGCGCTCATaGGCATACTGGACAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AWECPGEEEQSVSAPWPRRAWRS*AYWTKA Trigger: TGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCCG...CCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGGCTCTCCAGCCATGTaGATGTCCAGGGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AECFCPLAQAVQTGRMHGGSPAM*MSRVCP Trigger: TGGACAGACCCTGGACATCAACATGGCTGGAGAGCC...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCGCTCTCTTTAGCCCCTaGGGTCTATTAGGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVPAIDWHPEMGAWLEAALFSP*GLLGLG Trigger: GCCCAAGCCTAATAGACCCAAGGGGCTAAAGAGAGC...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTCTGCCACCACCAACATaGCTACTGCCGCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RVFLPLGPGSADRKNAWGLPPPT*LLPPPP Trigger: TGGTGGAGGCGGCAGTAGCAATGTTGGTGGTGGCAG...ACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS CCA 90 bp | TGTAACACGGGGTCGCTTCACCGGAACTGCCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATAATCAAACAGCCTGGCACAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CNTGSLHRNCPGHRH*RKAASIIKQPGTEV Trigger: TACTTCTGTGCCAGGCTGTTTGATTATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGACCCCGTGTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS CCA 90 bp | AGCAGTCCCTCCTCATCACCATCATCTCGAGTTTGGACTTCTCCTTaGGGTGTGCCTGCCTCAGAAGCCGTGTCTTCTTGGGGCGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSSSPSSRVWTSP*GVPASEAVSSWGAG Trigger: ACCAGCGCCCCAAGAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAACTCGAGATGATGGTGATGAGGAGGGACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS CCA 90 bp | TGTAACACGGGGTCGCTTCACCGGAACTGCCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATAATCAAACAGCCTGTAGATGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CNTGSLHRNCPGHRH*RKAASIIKQPVDGS Trigger: ACTGCCATCTACAGGCTGTTTGATTATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGACCCCGTGTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000125872.8 ENSMUST00000129137.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGTTGGGTCTATTAGGCTaGGGCTCTCCAGCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWECPGEEEQSVSAPWPRLGLLG*GSPAML Trigger: CAACATGGCTGGAGAGCCCAAGCCTAATAGACCCAA...CCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGCTGCCACCACCAACATaGCTACTGCCGCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FPLVPAIDWHPEMGAWLELPPPT*LLPPPP Trigger: TGGTGGAGGCGGCAGTAGCAATGTTGGTGGTGGCAG...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS CCA 90 bp | CTCCTCCACCACTGCTGCTGTCACCCTTCTTCTTGCCATCTGGGTTaGCCTTCTGTTCCTCAGCAATCTGTTCCAAGCGACCCAACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHHCCCHPSSCHLG*PSVPQQSVPSDPTG Trigger: CCCTGTTGGGTCGCTTGGAACAGATTGCTGAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS CCA 90 bp | GCCTCCTCCTCCACCACTGCTGCTGTCACCCTTCTTCTTGCCATCTaGGTTGGCCTTCTGTTCCTCAGCAATCTGTTCCAAGCGACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSSTTAAVTLLLAI*VGLLFLSNLFQATQ Trigger: TTGGGTCGCTTGGAACAGATTGCTGAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCGGGCATGGCGCTCATaGGCATACTGGACAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CCQLSSGTRYRLASRDGCRAWRS*AYWTKA Trigger: TGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCCG...GCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGGCTCTCCAGCCATGTaGATGTCCAGGGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPLVPAIDWHPEMGAWLEGSPAM*MSRVCP Trigger: TGGACAGACCCTGGACATCAACATGGCTGGAGAGCC...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCAACAGGGCATCGATGTaGGACTTGATCTGTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVPAIDWHPEMGAWLEANRASM*DLICVS Trigger: GCTGACACAGATCAAGTCCAACATCGATGCCCTGTT...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GGATGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTGCCACTCGGCCGTACTaGGAAAAGATGGTCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GCSTHWLGCMGRELLLPAATRPY*EKMVST Trigger: TGTGGAGACCATCTTTTCCAAGTACGGCCGAGTGGC...AGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GGATGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTCGGGCATGGCGCTCATaGGCATACTGGACAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCSTHWLGCMGRELLLPARAWRS*AYWTKA Trigger: TGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCCG...AGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCTGTGTCAGCTCTGTTTaGATGGTCTGTAGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PLVPAIDWHPEMGAWLEACVSSV*MVCSSL Trigger: CAGTGAGCTACAGACCATCAAAACAGAGCTGACACA...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCGCATCGATGTTGGACTaGATCTGTGTCAGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVPAIDWHPEMGAWLEAASMLD*ICVSSV Trigger: AACAGAGCTGACACAGATCAAGTCCAACATCGATGC...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCGACTTAGGGTCATTCTaGTTGGTTACATTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLVPAIDWHPEMGAWLEADLGSF*LVTLLV Trigger: GACCAGCAATGTAACCAACAAGAATGACCCTAAGTC...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCGGGCATGGCGCTCATaGGCATACTGGACAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSTHWLGCMGRELLLPAFRAWRS*AYWTKA Trigger: TGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCCG...GAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTTTGGGTCTATTAGGCTaGGGCTCTCCAGCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAASFPLVPAIDWHPEMGLGLLG*GSPAML Trigger: CAACATGGCTGGAGAGCCCAAGCCTAATAGACCCAA...ACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGCAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGTGTGTCAGCTCTGTTTaGATGGTCTGTAGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AECFCPLAQAVQTGRMHGCVSSV*MVCSSL Trigger: CAGTGAGCTACAGACCATCAAAACAGAGCTGACACA...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGGCATCGATGTTGGACTaGATCTGTGTCAGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASFPLVPAIDWHPEMGAWASMLD*ICVSSV Trigger: AACAGAGCTGACACAGATCAAGTCCAACATCGATGC...CCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGAGCATCGATGTTGGACTaGATCTGTGTCAGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRASMLD*ICVSSV Trigger: AACAGAGCTGACACAGATCAAGTCCAACATCGATGC...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGCATCGATGTTGGACTaGATCTGTGTCAGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AECFCPLAQAVQTGRMHGASMLD*ICVSSV Trigger: AACAGAGCTGACACAGATCAAGTCCAACATCGATGC...CCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS CCA 90 bp | TCGCTATGTGTTAGCAGTCCCTCCTCATCACCATCATCTCGAGTTTaGACTTCTCCTTGGGGTGTGCCTGCCTCAGAAGCCGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLCVSSPSSSPSSRV*TSPWGVPASEAVSS Trigger: AGAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAACTCGAGATGATGGTGATGAGGAGGGACTGCTAACACATAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGACTTAGGGTCATTCTaGTTGGTTACATTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SWGRRAECFCPLAQAVQTDLGSF*LVTLLV Trigger: GACCAGCAATGTAACCAACAAGAATGACCCTAAGTC...TGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGACTTAGGGTCATTCTaGTTGGTTACATTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GNVLGKKSRVFLPLGPGSDLGSF*LVTLLV Trigger: GACCAGCAATGTAACCAACAAGAATGACCCTAAGTC...ACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGACTTAGGGTCATTCTaGTTGGTTACATTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGMSWGRRAECFCPLAQADLGSF*LVTLLV Trigger: GACCAGCAATGTAACCAACAAGAATGACCCTAAGTC...TGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCTTGGGTCTATTAGGCTaGGGCTCTCCAGCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSTHWLGCMGRELLLPAFLGLLG*GSPAML Trigger: CAACATGGCTGGAGAGCCCAAGCCTAATAGACCCAA...GAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGACAGGAAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAGCTCTCTTTAGCCCCTaGGGTCTATTAGGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SADRKNAWGKGRPVTPLAALFSP*GLLGLG Trigger: GCCCAAGCCTAATAGACCCAAGGGGCTAAAGAGAGC...TGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTTCCTGTCTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGAATGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCTCTTTAACTTGATTTaGGCTGAGCCAGTAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: AWECPGEEEQSVSAPWPRLFNLI*AEPVVT Trigger: TGTCACTACTGGCTCAGCCAAAATCAAGTTAAAGAG...CCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACATTCCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGGGTTGTGTCAGCTCTGTTTaGATGGTCTGTAGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RVFLPLGPGSADRKNAWGCVSSV*MVCSSL Trigger: CAGTGAGCTACAGACCATCAAAACAGAGCTGACACA...ACCCCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAAGAATGCATGGTGTGTCAGCTCTGTTTaGATGGTCTGTAGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SRVFLPLGPGSADRKNAWCVSSV*MVCSSL Trigger: CAGTGAGCTACAGACCATCAAAACAGAGCTGACACA...CCATGCATTCTTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCAACAGGGCATCGATGTaGGACTTGATCTGTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: STHWLGCMGRELLLPAFLNRASM*DLICVS Trigger: GCTGACACAGATCAAGTCCAACATCGATGCCCTGTT...GAGGAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCAGGCTCTCCAGCCATGTaGATGTCCAGGGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAGSPAM*MSRVCP Trigger: TGGACAGACCCTGGACATCAACATGGCTGGAGAGCC...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGGCCGGCACAGAAGTAGTCTaGGTAGTAATCATAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLVPAIDWHPEMGAWLEAGTEVV*VVIIVK Trigger: TTTGACTATGATTACTACCAAGACTACTTCTGTGCC...GGCCTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGATCACTGCTCTTTAACTaGATTTTGGCTGAGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CPGEEEQSVSAPWPRQCRSLLFN*ILAEPV Trigger: TACTGGCTCAGCCAAAATCAAGTTAAAGAGCAGTGA...TCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGTCACTGCTCTTTAACTaGATTTTGGCTGAGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASFPLVPAIDWHPEMGAWSLLFN*ILAEPV Trigger: TACTGGCTCAGCCAAAATCAAGTTAAAGAGCAGTGA...CCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAAGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAAGAGCAGAGTGTTTCTGCCCCTTGGCCCAGGCAGTGCAGACAGGAATCACTGCTCTTTAACTaGATTTTGGCTGAGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GEEEQSVSAPWPRQCRQESLLFN*ILAEPV Trigger: TACTGGCTCAGCCAAAATCAAGTTAAAGAGCAGTGA...TTCCTGTCTGCACTGCCTGGGCCAAGGGGCAGAAACACTCTGCTCTTCTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCAGCTCTCTTTAGCCCCTaGGGTCTATTAGGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAALFSP*GLLGLG Trigger: GCCCAAGCCTAATAGACCCAAGGGGCTAAAGAGAGC...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS CCA 90 bp | TGGGCACAGGCACTGGAGAAAGGCGGCCTCGATAATCAAACAGCCTaGCACAGAAGTAGTCTTGGTAGTAATCATAGTCAAAGCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: WAQALEKGGLDNQTA*HRSSLGSNHSQSCS Trigger: GCTACAGCTTTGACTATGATTACTACCAAGACTACTTCTGTGCCAGGCTGTTTGATTATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 ENSMUST00000140713.3 |
||
| CDS-3UTR CAA 90 bp | CACCTCAGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTGCTCTCTTTAGCCCCTaGGGTCTATTAGGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLRAYLDPISLLSGSSHPALFSP*GLLGLG Trigger: GCCCAAGCCTAATAGACCCAAGGGGCTAAAGAGAGC...AGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCTGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGCTCTTTAACTTGATTTaGGCTGAGCCAGTAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FPLVPAIDWHPEMGAWLELFNLI*AEPVVT Trigger: TGTCACTACTGGCTCAGCCAAAATCAAGTTAAAGAG...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCTGGTACCCGCTATAGACTGGCATCCAGAGATGGGTGCCTGGCTTGAGTCACTGCTCTTTAACTaGATTTTGGCTGAGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPLVPAIDWHPEMGAWLESLLFN*ILAEPV Trigger: TACTGGCTCAGCCAAAATCAAGTTAAAGAGCAGTGA...CTCAAGCCAGGCACCCATCTCTGGATGCCAGTCTATAGCGGGTACCAGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGCACTCACTGGCTAGGATGCATGGGGAGAGAGTTACTGCTGCCAGCTTTCCTCTTTAACTTGATTTaGGCTGAGCCAGTAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CSTHWLGCMGRELLLPAFLFNLI*AEPVVT Trigger: TGTCACTACTGGCTCAGCCAAAATCAAGTTAAAGAG...GAAAGCTGGCAGCAGTAACTCTCTCCCCATGCATCCTAGCCAGTGAGTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | CACCTCAGAGCATATTTGGATCCAATCTCTTTATTGTCAGGTTCCTCCCACCCTAACAGGGCATCGATGTaGGACTTGATCTGTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLRAYLDPISLLSGSSHPNRASM*DLICVS Trigger: GCTGACACAGATCAAGTCCAACATCGATGCCCTGTT...AGGGTGGGAGGAACCTGACAATAAAGAGATTGGATCCAAATATGCTCTGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058089.13 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCACTCTTTAACTTGATTTaGGCTGAGCCAGTAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KNAWGKGRPVTPLAKDVALFNLI*AEPVVT Trigger: TGTCACTACTGGCTCAGCCAAAATCAAGTTAAAGAG...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 |
||
| CDS-3UTR CAA 90 bp | AAGAATGCATGGGGTAAGGGTAGGCCAGTAACTCCACTTGCAAAGGATGTAGCAGGCACAGAAGTAGTCTaGGTAGTAATCATAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNAWGKGRPVTPLAKDVAGTEVV*VVIIVK Trigger: TTTGACTATGATTACTACCAAGACTACTTCTGTGCC...TGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 |
||
| CDS GCA 72 bp | CAAAGGGACTGTAACACGGGGTCGCTTCACCGGAACTaGCCTGGGCACAGGCACTGGAGAAAGGCGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QRDCNTGSLHRN*PGHRHWRKAAS Trigger: CGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGACCCCGTGTTACAGTCCCTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000125872.8 ENSMUST00000129137.8 ENSMUST00000140713.3 |
||
| CDS CCA 72 bp | GGGTCGCTTCACCGGAACTGCCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATAATCAAACAGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLHRNCPGHRH*RKAASIIKQPG Trigger: GCCAGGCTGTTTGATTATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CCA 72 bp | GGGTCGCTTCACCGGAACTGCCCTGGGCACAGGCACTaGAGAAAGGCGGCCTCGATAATCAAACAGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GSLHRNCPGHRH*RKAASIIKQPV Trigger: TACAGGCTGTTTGATTATCGAGGCCGCCTTTCTCCAGTGCCTGTGCCCAGGGCAGTTCCGGTGAAGCGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000125872.8 ENSMUST00000129137.8 |
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| CDS CAA 90 bp | CCTCCTCCACCACTGCTGCTGTCACCCTTCTTCTTGCCATCTGGGTaGGCCTTCTGTTCCTCAGCAATCTGTTCCAAGCGACCCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: PPPPLLLSPFFLPSG*AFCSSAICSKRPNR Trigger: CCTGTTGGGTCGCTTGGAACAGATTGCTGAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACAGCAGCAGTGGTGGAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CCA 72 bp | TCTCTCCCAGCACAGCTGCCCGGGCATGGCGCTCATTaGCATACTGGACAAAAGCATAGCCTTTGTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SLPAQLPGHGAH*HTGQKHSLCAQ Trigger: CTGTGCACAAAGGCTATGCTTTTGTCCAGTATGCCAATGAGCGCCATGCCCGGGCAGCTGTGCTGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000125872.8 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CAA 90 bp | GTGACAGCTGTGGAGCGGGCAAAGAGCTTGACAGGTATCGTAGTTTaGACACGGCGAACCAAAGGGACTGTAACACGGGGTCGCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: VTAVERAKSLTGIVV*TRRTKGTVTRGRFT Trigger: GGTGAAGCGACCCCGTGTTACAGTCCCTTTGGTTCGCCGTGTCAAAACTACGATACCTGTCAAGCTCTTTGCCCGCTCCACAGCTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CCA 72 bp | CACTGCTGCTGTCACCCTTCTTCTTGCCATCTGGGTTaGCCTTCTGTTCCTCAGCAATCTGTTCCAAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: HCCCHPSSCHLG*PSVPQQSVPSD Trigger: GTCGCTTGGAACAGATTGCTGAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACAGCAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CCA 72 bp | TCCTCATCACCATCATCTCGAGTTTGGACTTCTCCTTaGGGTGTGCCTGCCTCAGAAGCCGTGTCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSPSSRVWTSP*GVPASEAVSSW Trigger: CCAAGAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAACTCGAGATGATGGTGATGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | GTGGAGCGGGCAAAGAGCTTGACAGGTATCGTAGTTTaGACACGGCGAACCAAAGGGACTGTAACACGGGGT | + |
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Preference number: 6 (lower is better) Translates to: VERAKSLTGIVV*TRRTKGTVTRG Trigger: ACCCCGTGTTACAGTCCCTTTGGTTCGCCGTGTCAAAACTACGATACCTGTCAAGCTCTTTGCCCGCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | CCACTGCTGCTGTCACCCTTCTTCTTGCCATCTGGGTaGGCCTTCTGTTCCTCAGCAATCTGTTCCAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: PLLLSPFFLPSG*AFCSSAICSKR Trigger: TCGCTTGGAACAGATTGCTGAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACAGCAGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | CTCCTCATCACCATCATCTCGAGTTTGGACTTCTCCTaGGGGTGTGCCTGCCTCAGAAGCCGTGTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLITIISSLDFS*GCACLRSRVFL Trigger: CAAGAAGACACGGCTTCTGAGGCAGGCACACCCCAAGGAGAAGTCCAAACTCGAGATGATGGTGATGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CCA 72 bp | TCCACCACTGCTGCTGTCACCCTTCTTCTTGCCATCTaGGTTGGCCTTCTGTTCCTCAGCAATCTGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: STTAAVTLLLAI*VGLLFLSNLFQ Trigger: TTGGAACAGATTGCTGAGGAACAGAAGGCCAACCCAGATGGCAAGAAGAAGGGTGACAGCAGCAGTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CAA 90 bp | ATTTTGGCTGAGCCAGTAGTGACAGCTGTGGAGCGGGCAAAGAGCTaGACAGGTATCGTAGTTTTGACACGGCGAACCAAAGGGACTGTA | + |
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Preference number: 6 (lower is better) Translates to: ILAEPVVTAVERAKS*TGIVVLTRRTKGTV Trigger: TACAGTCCCTTTGGTTCGCCGTGTCAAAACTACGATACCTGTCAAGCTCTTTGCCCGCTCCACAGCTGTCACTACTGGCTCAGCCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | TGTTCCAAGCGACCCAACAGGGCATCGATGTTGGACTaGATCTGTGTCAGCTCTGTTTTGATGGTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: CSKRPNRASMLD*ICVSSVLMVCS Trigger: GCTACAGACCATCAAAACAGAGCTGACACAGATCAAGTCCAACATCGATGCCCTGTTGGGTCGCTTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | GCAATCTGTTCCAAGCGACCCAACAGGGCATCGATGTaGGACTTGATCTGTGTCAGCTCTGTTTTGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: AICSKRPNRASM*DLICVSSVLMV Trigger: GACCATCAAAACAGAGCTGACACAGATCAAGTCCAACATCGATGCCCTGTTGGGTCGCTTGGAACAGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CAA 90 bp | AGAAAGGCGGCCTCGATAATCAAACAGCCTGGCACAGAAGTAGTCTaGGTAGTAATCATAGTCAAAGCTGTAGCCACTGTAGATGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RKAASIIKQPGTEVV*VVIIVKAVATVDGS Trigger: ACTGCCATCTACAGTGGCTACAGCTTTGACTATGATTACTACCAAGACTACTTCTGTGCCAGGCTGTTTGATTATCGAGGCCGCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CAA 90 bp | CCCAACAGGGCATCGATGTTGGACTTGATCTGTGTCAGCTCTGTTTaGATGGTCTGTAGCTCACTGCTCTTTAACTTGATTTTGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PNRASMLDLICVSSV*MVCSSLLFNLILAE Trigger: CTCAGCCAAAATCAAGTTAAAGAGCAGTGAGCTACAGACCATCAAAACAGAGCTGACACAGATCAAGTCCAACATCGATGCCCTGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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| CDS CCA 72 bp | GCACTGGAGAAAGGCGGCCTCGATAATCAAACAGCCTaGCACAGAAGTAGTCTTGGTAGTAATCATAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: ALEKGGLDNQTA*HRSSLGSNHSQ Trigger: TTGACTATGATTACTACCAAGACTACTTCTGTGCCAGGCTGTTTGATTATCGAGGCCGCCTTTCTCCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | GCCTCGATAATCAAACAGCCTGGCACAGAAGTAGTCTaGGTAGTAATCATAGTCAAAGCTGTAGCCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: ASIIKQPGTEVV*VVIIVKAVATV Trigger: TACAGTGGCTACAGCTTTGACTATGATTACTACCAAGACTACTTCTGTGCCAGGCTGTTTGATTATCGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029120.14 ENSMUST00000116389.9 ENSMUST00000140713.3 |
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| CDS CAA 72 bp | GCATCGATGTTGGACTTGATCTGTGTCAGCTCTGTTTaGATGGTCTGTAGCTCACTGCTCTTTAACTTGATT | + |
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Preference number: 6 (lower is better) Translates to: ASMLDLICVSSV*MVCSSLLFNLI Trigger: AATCAAGTTAAAGAGCAGTGAGCTACAGACCATCAAAACAGAGCTGACACAGATCAAGTCCAACATCGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029120.14 ENSMUST00000058089.13 ENSMUST00000109701.10 ENSMUST00000116389.9 ENSMUST00000129137.8 ENSMUST00000140713.3 |
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