Pregenerated sensors for RALGDS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026821Ensembl transcript IDs: ENSMUST00000028170.15, ENSMUST00000100241.10, ENSMUST00000113893.8, ENSMUST00000135803.8, ENSMUST00000137215.3, ENSMUST00000140704.2, ENSMUST00000238699.2
Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTGGAACTGGTTCTAGCTCAGGAGCTGGTGCCACCACTGGGCTaGAGGCCAGCACTGGCACTGGGGCCGCAGCGGGCTCTCGTACTG | + |
|
Preference number: 1 (lower is better) Translates to: ALELVLAQELVPPLG*RPALALGPQRALVL Trigger: CAGTACGAGAGCCCGCTGCGGCCCCAGTGCCAGTGCTGGCCTCCAGCCCAGTGGTGGCACCAGCTCCTGAGCTAGAACCAGTTCCAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| 3UTR GCA 90 bp | AGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTaGTGGGTGTATGTGTGTCCTGGAGCATCCGGGAGCATGGGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: RPVPVGTRRECSRQP*WVYVCPGASGSMGG Trigger: GCCACCCATGCTCCCGGATGCTCCAGGACACACATACACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 90 bp | GGCAGCCCTGCTGGGTGTATGTGTGTCCTGGAGCATCCGGGAGCATaGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: GSPAGCMCVLEHPGA*VAVICTWGGVSKVW Trigger: CCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGGACACACATACACCCAGCAGGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 90 bp | CACGAGAGGGCTTCTCTCTCTGATCCAAGGGAGGGCTTGGGCTCCTaGTGGGCGAGGCTCCCTCACTCTGTAGGCCCTGAAGGTGGAATC | + |
|
Preference number: 1 (lower is better) Translates to: HERASLSDPREGLGS*WARLPHSVGPEGGI Trigger: GATTCCACCTTCAGGGCCTACAGAGTGAGGGAGCCTCGCCCACCAGGAGCCCAAGCCCTCCCTTGGATCAGAGAGAGAAGCCCTCTCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR TCA 90 bp | GGGCTTGGGCTCCTGGTGGGCGAGGCTCCCTCACTCTGTAGGCCCTaGAGGTGGAATCTTTGGTGCAGCCTGAGAAAGGCTAGAGTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: GLGLLVGEAPSLCRP*RWNLWCSLRKARVW Trigger: CCACACTCTAGCCTTTCTCAGGCTGCACCAAAGATTCCACCTTCAGGGCCTACAGAGTGAGGGAGCCTCGCCCACCAGGAGCCCAAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR TCA 90 bp | GGGATTCAATACCAACCGGGCAGTTCACGAGAGGGCTTCTCTCTCTaGTCCAAGGGAGGGCTTGGGCTCCTGGTGGGCGAGGCTCCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: GIQYQPGSSREGFSL*SKGGLGLLVGEAPS Trigger: TGAGGGAGCCTCGCCCACCAGGAGCCCAAGCCCTCCCTTGGATCAGAGAGAGAAGCCCTCTCGTGAACTGCCCGGTTGGTATTGAATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 90 bp | GCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTaGTGGATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGC | + |
|
Preference number: 1 (lower is better) Translates to: AWVAVICTWGGVSKV*WIVSRAGKVPCPVG Trigger: GCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR CCA 90 bp | TGTGTCCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTaGGGAGGTGTCAGCAAAGTGTGGTGGATAGTGTCCAGGGCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: CVLEHPGAWVAVICT*GGVSKVWWIVSRAG Trigger: GCCTGCCCTGGACACTATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGGACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR CCA 90 bp | TGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTaGATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: WVAVICTWGGVSKVW*IVSRAGKVPCPVGN Trigger: GTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR CCA 90 bp | GGAGGAAAGGCTAGGACCTCCATGAAAGTCCCAGGCCAGTGCCTGTaGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGTATG | + |
|
Preference number: 1 (lower is better) Translates to: GGKARTSMKVPGQCL*AQGENAVGSPAGCM Trigger: CATACACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTGGGACTTTCATGGAGGTCCTAGCCTTTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR TCA 90 bp | AGAGTAAACTGTTCAGCCACCAAGTCAGGAGGGAACAGCAGAAGGTaGGGCTTCTCGGTTAGTCCATTCTCCGTGGCTTCAGGCAGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: RVNCSATKSGGNSRR*GFSVSPFSVASGRD Trigger: GTCTCTGCCTGAAGCCACGGAGAATGGACTAACCGAGAAGCCTCACCTTCTGCTGTTCCCTCCTGACTTGGTGGCTGAACAGTTTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| 3UTR GCA 90 bp | TATACAAATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTaGGTGTCGTCTTGTACAGCCCGGATGCAGCGGTGGTCAATGGCA | + |
|
Preference number: 1 (lower is better) Translates to: YTNVQLSSSSPQTSH*VSSCTARMQRWSMA Trigger: TGCCATTGACCACCGCTGCATCCGGGCTGTACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATTTGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAGACGGCGGGCTCCAGCTCTGGAGCCAGTGCTAGGGATGGCTCAGGCTCTAGCTGGTGCCACCACTaGGCTGGAGGCCAGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: CETAGSSSGASARDGSGSSWCHH*AGGQHW Trigger: CCAGTGCTGGCCTCCAGCCCAGTGGTGGCACCAGCT...AGAGCCTGAGCCATCCCTAGCACTGGCTCCAGAGCTGGAGCCCGCCGTCTCACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| 3UTR CAA 90 bp | CGGGCAGTTCACGAGAGGGCTTCTCTCTCTGATCCAAGGGAGGGCTaGGGCTCCTGGTGGGCGAGGCTCCCTCACTCTGTAGGCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RAVHERASLSDPREG*GSWWARLPHSVGPE Trigger: TTCAGGGCCTACAGAGTGAGGGAGCCTCGCCCACCAGGAGCCCAAGCCCTCCCTTGGATCAGAGAGAGAAGCCCTCTCGTGAACTGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCGCCTGGACTGGCAGGTaGGCAGAGGTACCTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAAWTGR*AEVPVW Trigger: CCACACAGGTACCTCTGCCCACCTGCCAGTCCAGGC...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGGGGGGTAGCCTGGACTaGCAGGTGGGCAGAGGTACC | + |
|
Preference number: 2 (lower is better) Translates to: GAWVAVICTWGGVSKVWWGGSLD*QVGRGT Trigger: GGTACCTCTGCCCACCTGCCAGTCCAGGCTACCCCC...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAGGGAACAGCAGAAGGTGAGGCTTCTCGGTTAGTCCATTCTCCGTGGCTTGTGCCACCACTGGGCTaGAGGCCAGCACTGGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QEGTAEGEASRLVHSPWLVPPLG*RPALAL Trigger: CAGTGCCAGTGCTGGCCTCCAGCCCAGTGGTGGCAC...AAGCCACGGAGAATGGACTAACCGAGAAGCCTCACCTTCTGCTGTTCCCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGTTGGCAACACTCCTTaGCAAAAGTCAGCTAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QASACGHKERMQSAALLGVGNTP*QKSASP Trigger: AGGACTAGCTGACTTTTGCCAAGGAGTGTTGCCAAC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CAA 90 bp | TCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTaGTACAGCCCGGATGCAGCGGTGGTCAATGGCACTTTCAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVVFLLPTNLPLRVV*YSPDAAVVNGTFSG Trigger: TCCACTGAAAGTGCCATTGACCACCGCTGCATCCGGGCTGTACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTAGGCTAGGACCTCCATaGAAGTCCCAGGCCAGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCRLGPP*KSQASA Trigger: GGCACTGGCCTGGGACTTTCATGGAGGTCCTAGCCT...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGAGGGCTTCTCTCTCTaGTCCAAGGGAGGGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCEGFSL*SKGGLG Trigger: CCCAAGCCCTCCCTTGGATCAGAGAGAGAAGCCCTC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGGTCCCATGCCCAGTTaGCAACACTCCTTGGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDGPMPS*QHSLAK Trigger: TTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGTCAGCAAAGTGTGGTaGATAGTGTCCAGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCVSKVW*IVSRAG Trigger: GCCTGCCCTGGACACTATCCACCACACTTTGCTGAC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGTTGGCAACACTCCTTaGCAAAAGTCAGCTAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCVGNTP*QKSASP Trigger: AGGACTAGCTGACTTTTGCCAAGGAGTGTTGCCAAC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 72 bp | GCTGGGTGTATGTGTGTCCTGGAGCATCCGGGAGCATaGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGCMCVLEHPGA*VAVICTWGGVS Trigger: GCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGGACACACATACACCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 72 bp | GCTTCTCTCTCTGATCCAAGGGAGGGCTTGGGCTCCTaGTGGGCGAGGCTCCCTCACTCTGTAGGCCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASLSDPREGLGS*WARLPHSVGPE Trigger: TTCAGGGCCTACAGAGTGAGGGAGCCTCGCCCACCAGGAGCCCAAGCCCTCCCTTGGATCAGAGAGAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 72 bp | GCTAGGACCTCCATGAAAGTCCCAGGCCAGTGCCTGTaGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARTSMKVPGQCL*AQGENAVGSPA Trigger: AGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTGGGACTTTCATGGAGGTCCTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR TCA 72 bp | CTCCTGGTGGGCGAGGCTCCCTCACTCTGTAGGCCCTaGAGGTGGAATCTTTGGTGCAGCCTGAGAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVGEAPSLCRP*RWNLWCSLRKA Trigger: AGCCTTTCTCAGGCTGCACCAAAGATTCCACCTTCAGGGCCTACAGAGTGAGGGAGCCTCGCCCACCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR GCA 72 bp | GGTACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTaGTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTCVARATLVCK*LVSSQSARPRR Trigger: TCTCCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR CCA 72 bp | GAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTaGGGAGGTGTCAGCAAAGTGTGGTGGATAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EHPGAWVAVICT*GGVSKVWWIVS Trigger: GGACACTATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR TCA 72 bp | AGCTCTGGAGCCAGTGCTAGGGATGGCTCAGGCTCTTaGGGTGGCTCTGGAACTGGTTCTAGCTCAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSGASARDGSGS*GGSGTGSSSGA Trigger: AGCTCCTGAGCTAGAACCAGTTCCAGAGCCACCTCAAGAGCCTGAGCCATCCCTAGCACTGGCTCCAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| 3UTR GCA 72 bp | GTGTGGTGGATAGTGTCCAGGGCAGGCAAGGTCCCATaGCCAGTTGGCAACACTCCTTGGCAAAAGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VWWIVSRAGKVP*PVGNTPWQKSA Trigger: AGCTGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTATCCACCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| 3UTR CCA 72 bp | CAGCCCGGATGCAGCGGTGGTCAATGGCACTTTCAGTaGACTGGGATTCAATACCAACCGGGCAGTTCACGA | + |
|
Preference number: 3 (lower is better) Translates to: QPGCSGGQWHFQ*TGIQYQPGSSR Trigger: TCGTGAACTGCCCGGTTGGTATTGAATCCCAGTCCACTGAAAGTGCCATTGACCACCGCTGCATCCGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CCA 72 bp | GCAGAAGGTGAGGCTTCTCGGTTAGTCCATTCTCCGTaGCTTCAGGCAGAGACCAGGAAGGCTCTAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AEGEASRLVHSP*LQAETRKALRQ Trigger: CTGCCTTAGAGCCTTCCTGGTCTCTGCCTGAAGCCACGGAGAATGGACTAACCGAGAAGCCTCACCTTCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| 3UTR CCA 72 bp | CACTGCGTGTCGTCTTGTACAGCCCGGATGCAGCGGTaGTCAATGGCACTTTCAGTGGACTGGGATTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: HCVSSCTARMQR*SMALSVDWDSI Trigger: TATTGAATCCCAGTCCACTGAAAGTGCCATTGACCACCGCTGCATCCGGGCTGTACAAGACGACACGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGAGGCCAGCACTGGCACTGGGGCCGCAGCGGGCTCTCGTACTGGAGTTCAGACTCAGCCTCACTaGGCTCCAGGTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLEASTGTGAAAGSRTGVQTQPH*APGPPA Trigger: AGCTGGAGGACCTGGAGCCCAGTGAGGCTGAGTCTG...AACTCCAGTACGAGAGCCCGCTGCGGCCCCAGTGCCAGTGCTGGCCTCCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGGCTGTGCAGCACCACTaGGCAGCTGTCGGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQAVQHH*AAVGDA Trigger: GGCGTCCCCGACAGCTGCCCAGTGGTGCTGCACAGC...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGCTCTGTGAGACGGCGGGCTCCAGCTCTGGAGCCAGTGCTAGGGATGGCGCGGCGCTCCAGATCTaGGCCAGGCATGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLCETAGSSSGASARDGAALQI*ARHVEL Trigger: CAGCTCAACATGCCTGGCTCAGATCTGGAGCGCCGC...GCCATCCCTAGCACTGGCTCCAGAGCTGGAGCCCGCCGTCTCACAGAGCCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGTGCTGGAGGCGGAGCTaGTGCCAGAGGTCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQCWRRS*CQRSLG Trigger: CCCCAGAGACCTCTGGCATCAGCTCCGCCTCCAGCA...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTGGGCCAGGAGAAGGTaGGCGCGGCGCTCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAWARRR*ARRSRS Trigger: AGATCTGGAGCGCCGCGCTCACCTTCTCCTGGCCCA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTGCTGGAGGCGGAGCTaGTGCCAGAGGTCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEACWRRS*CQRSLG Trigger: CCCCAGAGACCTCTGGCATCAGCTCCGCCTCCAGCA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTTCCTCAGGGTGTTGCTaGCCGACTCAGACGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGSSGCC*PTQTGA Trigger: AGCCCCCGTCTGAGTCGGCCAGCAACACCCTGAGGA...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGAGGCCAGCACTGGCACTGGGGCCGCAGCGGGCTCTCGTACTGGAGTTTGCACAGGAAGACAGTaGCGTAGGAAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLEASTGTGAAAGSRTGVCTGRQ*RRKGHC Trigger: GCAGTGACCTTTCCTACGTCACTGTCTTCCTGTGCA...AACTCCAGTACGAGAGCCCGCTGCGGCCCCAGTGCCAGTGCTGGCCTCCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR TCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGTGCTGGAGGCGGAGCTaGTGCCAGAGGTCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWCWRRS*CQRSLG Trigger: CCCCAGAGACCTCTGGCATCAGCTCCGCCTCCAGCA...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTTGCCGAGGTAAGGGCTaGACCGAAGCTGGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGCRGKG*TEAGHR Trigger: CCTGTGACCAGCTTCGGTGCAGCCCTTACCTCGGCA...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGTGCCGAGGTAAGGGCTaGACCGAAGCTGGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQCRGKG*TEAGHR Trigger: CCTGTGACCAGCTTCGGTGCAGCCCTTACCTCGGCA...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGCCCACACGCTGCGGCTaGGCCGGGAACCGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRPTRCG*AGNRET Trigger: TGTTTCCCGGTTCCCGGCGCAGCCGCAGCGTGTGGG...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGACGGCGGGCTCCAGCTCTGGAGCCAGTGCTAGGGATGGCTCAGGCTCTAGACAGCACTGGAGCTaGGGACAGGGCCTCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CETAGSSSGASARDGSGSRQHWS*GQGLRL Trigger: GAGTCTGAGGCCCTGTCCCCAGCTCCAGTGCTGTCT...AGAGCCTGAGCCATCCCTAGCACTGGCTCCAGAGCTGGAGCCCGCCGTCTCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCTTCAGAGACAGCACTaGAGCTGGGGACAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQLQRQH*SWGQGL Trigger: GAGGCCCTGTCCCCAGCTCCAGTGCTGTCTCTGAAG...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGGGGCTGCACCGAAGCTaGTCACAGGACTTGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQGLHRS*SQDLEW Trigger: CCACTCCAAGTCCTGTGACCAGCTTCGGTGCAGCCC...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCCCCAATCTCCTGCGTaGAGCTCTCCAGGCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWPQSPA*SSPGAA Trigger: TGCCGCGCCTGGAGAGCTCCACGCAGGAGATTGGGG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTTGGGCCAGGAGAAGGTaGGCGCGGCGCTCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARWARRR*ARRSRS Trigger: AGATCTGGAGCGCCGCGCTCACCTTCTCCTGGCCCA...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCACTGCTACTGGTGCTaGGCTCCGTGCTGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWHCYWC*APCWEP Trigger: AGGCTCCCAGCACGGAGCTCAGCACCAGTAGCAGTG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGGCTCCTTGGTGTAGCTaGACCTTGCGCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQAPWCS*TLRREM Trigger: CATCTCCCTGCGCAAGGTCCAGCTACACCAAGGAGC...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGAAAGGTCACTGCCCTaGAAGGCAGGCACCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGERSLP*KAGTRC Trigger: ACACCTGGTGCCTGCCTTCCAGGGCAGTGACCTTTC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCAGACAGCACTGGAGCTaGGGACAGGGCCTCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEARQHWS*GQGLRL Trigger: GAGTCTGAGGCCCTGTCCCCAGCTCCAGTGCTGTCT...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGTGCCACCACTGGGCTaGAGGCCAGCACTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVVPPLG*RPALAL Trigger: CAGTGCCAGTGCTGGCCTCCAGCCCAGTGGTGGCAC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTAGCTGGTGCCACCACTaGGCTGGAGGCCAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARSWCHH*AGGQHW Trigger: CCAGTGCTGGCCTCCAGCCCAGTGGTGGCACCAGCT...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGCCCCAATCTCCTGCGTaGAGCTCTCCAGGCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGPQSPA*SSPGAA Trigger: TGCCGCGCCTGGAGAGCTCCACGCAGGAGATTGGGG...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGGAGGAGTGGGAGAGTaGGCAGTGGTGCGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLGGVGE*AVVRRA Trigger: TGCCCGCCGCACCACTGCCCACTCTCCCACTCCTCC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| 3UTR CAA 72 bp | CACGAGAGGGCTTCTCTCTCTGATCCAAGGGAGGGCTaGGGCTCCTGGTGGGCGAGGCTCCCTCACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HERASLSDPREG*GSWWARLPHSV Trigger: TACAGAGTGAGGGAGCCTCGCCCACCAGGAGCCCAAGCCCTCCCTTGGATCAGAGAGAGAAGCCCTCTCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGCGGCGCTCCAGATCTaGGCCAGGCATGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGAALQI*ARHVEL Trigger: CAGCTCAACATGCCTGGCTCAGATCTGGAGCGCCGC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAATGGGCCAGGAGAAGGTaGGCGCGGCGCTCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQWARRR*ARRSRS Trigger: AGATCTGGAGCGCCGCGCTCACCTTCTCCTGGCCCA...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCCACTGCTACTGGTGCTaGGCTCCGTGCTGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVHCYWC*APCWEP Trigger: AGGCTCCCAGCACGGAGCTCAGCACCAGTAGCAGTG...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGTAGCTGCAGACCCCTaGGACGGAGCGCTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVVAADP*DGALVG Trigger: ACCCACAAGCGCTCCGTCTCAGGGGTCTGCAGCTAC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGTTGTAGAGAGGCAGTaGGGAGCTGTAGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGVVERQ*GAVAAD Trigger: GTCTGCAGCTACAGCTCCTCACTGCCTCTCTACAAC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGCGCGAGGTGCTCCTTaGCCTTCTTGTCCCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVARGAP*PSCPVG Trigger: CCCAACGGGACAAGAAGGGCAAGGAGCACCTCGCGC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGGTGAGGAGCTGTAGCTaGAGACCCCTGAGACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWVRSCS*RPLRRS Trigger: GCTCCGTCTCAGGGGTCTGCAGCTACAGCTCCTCAC...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCACCCACACGCTGCGGCTaGGCCGGGAACCGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSPTRCG*AGNRET Trigger: TGTTTCCCGGTTCCCGGCGCAGCCGCAGCGTGTGGG...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCTCCTCCCCAATCTCCTaGGTGGAGCTCTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVSSPIS*VELSRR Trigger: GCGCCTGGAGAGCTCCACGCAGGAGATTGGGGAGGA...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGACGGCGGGCTCCAGCTCTGGAGCCAGTGCTAGGGATGGCTCAGGCTCTAGGTCTAGCACCTGCTaGGTGGTAGTGAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CETAGSSSGASARDGSGSRSSTC*VVVKAL Trigger: CAGAGCCTTCACTACCACCCAGCAGGTGCTAGACCT...AGAGCCTGAGCCATCCCTAGCACTGGCTCCAGAGCTGGAGCCCGCCGTCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR CCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCAGACTCAGCCTCACTaGGCTCCAGGTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWQTQPH*APGPPA Trigger: AGCTGGAGGACCTGGAGCCCAGTGAGGCTGAGTCTG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGAGACAGCACTGGAGCTaGGGACAGGGCCTCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWRQHWS*GQGLRL Trigger: GAGTCTGAGGCCCTGTCCCCAGCTCCAGTGCTGTCT...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGTGCCACCACTGGGCTaGAGGCCAGCACTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDVPPLG*RPALAL Trigger: CAGTGCCAGTGCTGGCCTCCAGCCCAGTGGTGGCAC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGTGCCACCACTGGGCTaGAGGCCAGCACTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLVPPLG*RPALAL Trigger: CAGTGCCAGTGCTGGCCTCCAGCCCAGTGGTGGCAC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAAGCTGGTGCCACCACTaGGCTGGAGGCCAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSSWCHH*AGGQHW Trigger: CCAGTGCTGGCCTCCAGCCCAGTGGTGGCACCAGCT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCTCGAAAGCTGTCCCTaGAGACCTCTTCCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQLESCP*RPLPTS Trigger: AGACGTGGGAAGAGGTCTCCAGGGACAGCTTTCGAG...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGTCACAGGACTTGGAGTaGGCACTGCTACTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQSQDLE*ALLLVL Trigger: CAGCACCAGTAGCAGTGCCCACTCCAAGTCCTGTGA...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCCTCCACATCAGAGCTaGAAGAGCCAGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQPPHQS*KSQLSA Trigger: TGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGG...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGTGGTGCGGCGGGCAATaGCCCACCGCCTGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKWCGGQ*PTAWQS Trigger: TGACTGCCAGGCGGTGGGCCATTGCCCGCCGCACCA...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGTGGGAGAGTGGGCAGTaGTGCGGCGGGCAATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKWESGQ*CGGQWP Trigger: GGGCCATTGCCCGCCGCACCACTGCCCACTCTCCCA...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTTGCACAGGAAGACAGTaGCGTAGGAAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGCTGRQ*RRKGHC Trigger: GCAGTGACCTTTCCTACGTCACTGTCTTCCTGTGCA...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGTGCACAGGAAGACAGTaGCGTAGGAAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQCTGRQ*RRKGHC Trigger: GCAGTGACCTTTCCTACGTCACTGTCTTCCTGTGCA...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAGCGGCGCTCCAGATCTaGGCCAGGCATGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQAALQI*ARHVEL Trigger: CAGCTCAACATGCCTGGCTCAGATCTGGAGCGCCGC...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGCGGCGCTCCAGATCTaGGCCAGGCATGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLAALQI*ARHVEL Trigger: CAGCTCAACATGCCTGGCTCAGATCTGGAGCGCCGC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGAGTTGGCCACGTTGTTaGACTGGGCGACAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGSWPRC*TGRQWR Trigger: GCGCCACTGTCGCCCAGTTCAACAACGTGGCCAACT...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGAGTTGGCCACGTTGTTaGACTGGGCGACAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRSWPRC*TGRQWR Trigger: GCGCCACTGTCGCCCAGTTCAACAACGTGGCCAACT...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTGAACGGTGCCCTGGATaGCTCCTGTCTCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARERCPG*LLSPSA Trigger: GGCAGAAGGAGACAGGAGTCATCCAGGGCACCGTTC...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAGTAGCTGCAGACCCCTaGGACGGAGCGCTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQVAADP*DGALVG Trigger: ACCCACAAGCGCTCCGTCTCAGGGGTCTGCAGCTAC...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTCCATGGCTTTTCGGATaGCAGTCGGAGCCTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGPWLFG*QSEPYP Trigger: AGGATAAGGCTCCGACTGTCATCCGAAAAGCCATGG...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCGGTGTAGCTGGACCTTaGGCAGGGAGATGGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAGVAGP*AGRWSR Trigger: TCTACTCCATCTCCCTGCGCAAGGTCCAGCTACACC...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTACCAGCCTTCACCGTaGGCACCTTGCAGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAYQPSP*APCRSH Trigger: ATGAGACCTGCAAGGTGCGCACGGTGAAGGCTGGTA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGCGCGAGGTGCTCCTTaGCCTTCTTGTCCCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLARGAP*PSCPVG Trigger: CCCAACGGGACAAGAAGGGCAAGGAGCACCTCGCGC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCGGCGGTGGATGGCATTaGTCTGTAGAGCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAGGGWH*SVEQRG Trigger: TCCTCTCTGCTCTACAGAGCAATGCCATCCACCGCC...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGACTCCTGTCTCCTTCTaGCGCCTCTGGGCTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWTPVSF*RLWALL Trigger: TAGGAGAGCCCAGAGGCGGCAGAAGGAGACAGGAGT...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTTGCCGAGGTAAGGGCTaGACCGAAGCTGGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARCRGKG*TEAGHR Trigger: CCTGTGACCAGCTTCGGTGCAGCCCTTACCTCGGCA...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGTGAGGAGCTGTAGCTaGAGACCCCTGAGACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVVRSCS*RPLRRS Trigger: GCTCCGTCTCAGGGGTCTGCAGCTACAGCTCCTCAC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGTGAGGAGCTGTAGCTaGAGACCCCTGAGACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGVRSCS*RPLRRS Trigger: GCTCCGTCTCAGGGGTCTGCAGCTACAGCTCCTCAC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGATCCTGAGTCCCTTCTaGTTCATACGAGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQILSPF*FIRGRV Trigger: CACCCTCCCTCGTATGAAGCAGAAGGGACTCAGGAT...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGCTGCGTGAAGCTGTaGAGCACCACTGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVSCVKL*STTGQL Trigger: CAGCTGCCCAGTGGTGCTGCACAGCTTCACGCAGCT...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGAGATCAGGGTCGAGCTaGGTGAAGCTGTGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWRSGSS*VKLCST Trigger: GGTGCTGCACAGCTTCACGCAGCTCGACCCTGATCT...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCATCCTCCCCAATCTCCTaGGTGGAGCTCTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSSSPIS*VELSRR Trigger: GCGCCTGGAGAGCTCCACGCAGGAGATTGGGGAGGA...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCAGGTCTAGCACCTGCTaGGTGGTAGTGAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEARSSTC*VVVKAL Trigger: CAGAGCCTTCACTACCACCCAGCAGGTGCTAGACCT...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTAAATCCTCTGAGTATTaGTCCAGCCAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGKSSEY*SSQVPR Trigger: CCTGGGCACCTGGCTGGACCAATACTCAGAGGATTT...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGCAGACTCAGCCTCACTaGGCTCCAGGTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRQTQPH*APGPPA Trigger: AGCTGGAGGACCTGGAGCCCAGTGAGGCTGAGTCTG...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGCTTCAGAGACAGCACTaGAGCTGGGGACAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGLQRQH*SWGQGL Trigger: GAGGCCCTGTCCCCAGCTCCAGTGCTGTCTCTGAAG...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGTGCCACCACTGGGCTaGAGGCCAGCACTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSVPPLG*RPALAL Trigger: CAGTGCCAGTGCTGGCCTCCAGCCCAGTGGTGGCAC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAATCCTCAGGGTGTTGCTaGCCGACTCAGACGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQSSGCC*PTQTGA Trigger: AGCCCCCGTCTGAGTCGGCCAGCAACACCCTGAGGA...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTCACAGGACTTGGAGTaGGCACTGCTACTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEASQDLE*ALLLVL Trigger: CAGCACCAGTAGCAGTGCCCACTCCAAGTCCTGTGA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTACAGCAGGCCTAGCATaGACCCGGTCTGCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLTAGLA*TRSASR Trigger: CCGGGAAGCAGACCGGGTCCATGCTAGGCCTGCTGT...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| 3UTR CAA 72 bp | TTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTaGTACAGCCCGGATGCAGCGGTGGTCAATGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLLPTNLPLRVV*YSPDAAVVNGT Trigger: AGTGCCATTGACCACCGCTGCATCCGGGCTGTACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAAAGCCACCAGCTGCTTaGGGCAGGGAAAGTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSKPPAA*GRESPE Trigger: CTCCGGACTTTCCCTGCCTCAAGCAGCTGGTGGCTT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCGGCGCTCCAGATCTaGGCCAGGCATGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSAALQI*ARHVEL Trigger: CAGCTCAACATGCCTGGCTCAGATCTGGAGCGCCGC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAGTTGGCCACGTTGTTaGACTGGGCGACAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQSWPRC*TGRQWR Trigger: GCGCCACTGTCGCCCAGTTCAACAACGTGGCCAACT...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGAACGGTGCCCTGGATaGCTCCTGTCTCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDERCPG*LLSPSA Trigger: GGCAGAAGGAGACAGGAGTCATCCAGGGCACCGTTC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGAACGGTGCCCTGGATaGCTCCTGTCTCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLERCPG*LLSPSA Trigger: GGCAGAAGGAGACAGGAGTCATCCAGGGCACCGTTC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTAGCTGCAGACCCCTaGGACGGAGCGCTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKVAADP*DGALVG Trigger: ACCCACAAGCGCTCCGTCTCAGGGGTCTGCAGCTAC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCGCGAGGTGCTCCTTaGCCTTCTTGTCCCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSARGAP*PSCPVG Trigger: CCCAACGGGACAAGAAGGGCAAGGAGCACCTCGCGC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTATGGTAGGCGCGAGGTaGTCCTTGCCCTTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARMVGAR*SLPFLS Trigger: GGACAAGAAGGGCAAGGAGCACCTCGCGCCTACCAT...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGACTCCTGTCTCCTTCTaGCGCCTCTGGGCTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGTPVSF*RLWALL Trigger: TAGGAGAGCCCAGAGGCGGCAGAAGGAGACAGGAGT...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGGAGAGTGGGCAGTGGTaGGGCGGGCAATGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMESGQW*GGQWPT Trigger: GGTGGGCCATTGCCCGCCGCACCACTGCCCACTCTC...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCAAATCCTCTGAGTATTaGTCCAGCCAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAKSSEY*SSQVPR Trigger: CCTGGGCACCTGGCTGGACCAATACTCAGAGGATTT...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATAGACAGCACTGGAGCTaGGGACAGGGCCTCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDRQHWS*GQGLRL Trigger: GAGTCTGAGGCCCTGTCCCCAGCTCCAGTGCTGTCT...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCACTTCAGAGACAGCACTaGAGCTGGGGACAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSLQRQH*SWGQGL Trigger: GAGGCCCTGTCCCCAGCTCCAGTGCTGTCTCTGAAG...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTCAGAGACAGCACTaGAGCTGGGGACAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLLQRQH*SWGQGL Trigger: GAGGCCCTGTCCCCAGCTCCAGTGCTGTCTCTGAAG...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTGCTCTAAGGCAGGAGTaGGCACAGGAGCTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARALRQE*AQELTP Trigger: TGGAGTCAGCTCCTGTGCCCACTCCTGCCTTAGAGC...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGCGCTCTGCACTCCCTaGCCACCTCGATCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSALCTP*PPRSSV Trigger: AACACTGGATCGAGGTGGCCAGGGAGTGCAGAGCGC...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGCTGGTCACAGGACTTaGAGTGGGCACTGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGAGHRT*SGHCYW Trigger: CCAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGCTGGTCACAGGACTTaGAGTGGGCACTGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVAGHRT*SGHCYW Trigger: CCAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGGGCTGCACCGAAGCTaGTCACAGGACTTGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSGLHRS*SQDLEW Trigger: CCACTCCAAGTCCTGTGACCAGCTTCGGTGCAGCCC...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCCTCCACATCAGAGCTaGAAGAGCCAGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWPPHQS*KSQLSA Trigger: TGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGTCGGAGCCTTATCCTaGCTGGTCACCAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGVGALS*LVTRML Trigger: GAGCATCCTGGTGACCAGCCAGGATAAGGCTCCGAC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGCTGTGCAGCACCACTaGGCAGCTGTCGGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCAVQHH*AAVGDA Trigger: GGCGTCCCCGACAGCTGCCCAGTGGTGCTGCACAGC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGAGGAGATGGCATTTTTaGGTTGGTCCTGCGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRRRWHF*VGPAVR Trigger: GCGGACCGCAGGACCAACTCAAAAATGCCATCTCCT...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGGAGATGGCATTTTTaGGTTGGTCCTGCGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVRRWHF*VGPAVR Trigger: GCGGACCGCAGGACCAACTCAAAAATGCCATCTCCT...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGTTGACAGAAATCCTCTaGGTATTGGTCCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQLTEIL*VLVQPG Trigger: ACCTGGCTGGACCAATACTCAGAGGATTTCTGTCAA...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGAAGCCACCAGCTGCTTaGGGCAGGGAAAGTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKKPPAA*GRESPE Trigger: CTCCGGACTTTCCCTGCCTCAAGCAGCTGGTGGCTT...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | CATCAGAGTAAACTGTTCAGCCACCAAGTCAGGAGGGAACAGCAGAAGGTGAGGTGGGCCAGGAGAAGGTaGGCGCGGCGCTCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HQSKLFSHQVRREQQKVRWARRR*ARRSRS Trigger: AGATCTGGAGCGCCGCGCTCACCTTCTCCTGGCCCA...CCTCACCTTCTGCTGTTCCCTCCTGACTTGGTGGCTGAACAGTTTACTCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGTGGGCCAGGAGAAGGTaGGCGCGGCGCTCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMWARRR*ARRSRS Trigger: AGATCTGGAGCGCCGCGCTCACCTTCTCCTGGCCCA...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGATGGCTCAGGCTCTTaGGGTGGCTCTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDDGSGS*GGSGTG Trigger: ACCAGTTCCAGAGCCACCTCAAGAGCCTGAGCCATC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGGTCGCTCCAGCGCTTaGCAATGGCTGTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGGRSSA*QWLCFS Trigger: AGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGTGCTGGAGGCGGAGCTaGTGCCAGAGGTCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMCWRRS*CQRSLG Trigger: CCCCAGAGACCTCTGGCATCAGCTCCGCCTCCAGCA...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGGTTGTAGAGAGGCAGTaGGGAGCTGTAGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRVVERQ*GAVAAD Trigger: GTCTGCAGCTACAGCTCCTCACTGCCTCTCTACAAC...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTGTTGTAGAGAGGCAGTaGGGAGCTGTAGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARVVERQ*GAVAAD Trigger: GTCTGCAGCTACAGCTCCTCACTGCCTCTCTACAAC...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCCATGGCTTTTCGGATaGCAGTCGGAGCCTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWPWLFG*QSEPYP Trigger: AGGATAAGGCTCCGACTGTCATCCGAAAAGCCATGG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCAGCTTGTGATCCTCTaGGATGATCTGCACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWQLVIL*DDLHQL Trigger: GAGCTGGTGCAGATCATCTCAGAGGATCACAAGCTG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGACGGCGGGCTCCAGCTCTGGAGCCAGTGCTAGGGATGGCTCAGGCTCTTGCAGCCATATCTTTTaGACAGCAGGTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CETAGSSSGASARDGSGSCSHIF*TAGLAP Trigger: AGGTGCTAGACCTGCTGTTCAAAAGATATGGCTGCA...AGAGCCTGAGCCATCCCTAGCACTGGCTCCAGAGCTGGAGCCCGCCGTCTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGTCCTCCCCAATCTCCTaGGTGGAGCTCTGGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGSSPIS*VELWQS Trigger: AGATTGCCAGAGCTCCACGCAGGAGATTGGGGAGGA...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028170.15 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGGTGTAGCTGGACCTTaGGCAGGGAGATGGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVGVAGP*AGRWSR Trigger: TCTACTCCATCTCCCTGCGCAAGGTCCAGCTACACC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAATGGTAGGCGCGAGGTaGTCCTTGCCCTTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSMVGAR*SLPFLS Trigger: GGACAAGAAGGGCAAGGAGCACCTCGCGCCTACCAT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTATGGTAGGCGCGAGGTaGTCCTTGCCCTTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLMVGAR*SLPFLS Trigger: GGACAAGAAGGGCAAGGAGCACCTCGCGCCTACCAT...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGGGCGGTGGATGGCATTaGTCTGTAGAGCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRGGGWH*SVEQRG Trigger: TCCTCTCTGCTCTACAGAGCAATGCCATCCACCGCC...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATACTCCTGTCTCCTTCTaGCGCCTCTGGGCTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDTPVSF*RLWALL Trigger: TAGGAGAGCCCAGAGGCGGCAGAAGGAGACAGGAGT...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTGAGGAGCTGTAGCTaGAGACCCCTGAGACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKVRSCS*RPLRRS Trigger: GCTCCGTCTCAGGGGTCTGCAGCTACAGCTCCTCAC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGGGCTGGTCACCAGGATaGTCTTGTACATGTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWGWSPG*SCTCCR Trigger: ACGGCAACATGTACAAGAGCATCCTGGTGACCAGCC...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAAGCTGCGTGAAGCTGTaGAGCACCACTGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSSCVKL*STTGQL Trigger: CAGCTGCCCAGTGGTGCTGCACAGCTTCACGCAGCT...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGGCTCTCAGCAGTGGGTaGCAGCAGAGGTGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMALSSG*QQRCRA Trigger: TGCCCGGCACCTCTGCTGGCACCCACTGCTGAGAGC...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGCTCCTTGGTGTAGCTaGACCTTGCGCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSAPWCS*TLRREM Trigger: CATCTCCCTGCGCAAGGTCCAGCTACACCAAGGAGC...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGCTCCTTGGTGTAGCTaGACCTTGCGCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDAPWCS*TLRREM Trigger: CATCTCCCTGCGCAAGGTCCAGCTACACCAAGGAGC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTAGGTCTAGCACCTGCTaGGTGGTAGTGAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARRSSTC*VVVKAL Trigger: CAGAGCCTTCACTACCACCCAGCAGGTGCTAGACCT...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGGTCTAGCACCTGCTaGGTGGTAGTGAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVRSSTC*VVVKAL Trigger: CAGAGCCTTCACTACCACCCAGCAGGTGCTAGACCT...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTAGCTGGTGCCACCACTaGGCTGGAGGCCAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCSWCHH*AGGQHW Trigger: CCAGTGCTGGCCTCCAGCCCAGTGGTGGCACCAGCT...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGAGCTGGTGCCACCACTaGGCTGGAGGCCAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMSWCHH*AGGQHW Trigger: CCAGTGCTGGCCTCCAGCCCAGTGGTGGCACCAGCT...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCGCTCTGCACTCCCTaGCCACCTCGATCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSALCTP*PPRSSV Trigger: AACACTGGATCGAGGTGGCCAGGGAGTGCAGAGCGC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGCGCTCTGCACTCCCTaGCCACCTCGATCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKALCTP*PPRSSV Trigger: AACACTGGATCGAGGTGGCCAGGGAGTGCAGAGCGC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGTCTTCTTTAGGCGGTaGATGGCATTGCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QASACGHKERMQSAALLGVFFRR*MALLCR Trigger: TCTACAGAGCAATGCCATCCACCGCCTAAAGAAGAC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGCTCGAAAGCTGTCCCTaGAGACCTCTTCCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRLESCP*RPLPTS Trigger: AGACGTGGGAAGAGGTCTCCAGGGACAGCTTTCGAG...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCTCGAAAGCTGTCCCTaGAGACCTCTTCCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARLESCP*RPLPTS Trigger: AGACGTGGGAAGAGGTCTCCAGGGACAGCTTTCGAG...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGGGCTGCACCGAAGCTaGTCACAGGACTTGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKGLHRS*SQDLEW Trigger: CCACTCCAAGTCCTGTGACCAGCTTCGGTGCAGCCC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGTCGGAGCCTTATCCTaGCTGGTCACCAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDVGALS*LVTRML Trigger: GAGCATCCTGGTGACCAGCCAGGATAAGGCTCCGAC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGTCGGAGCCTTATCCTaGCTGGTCACCAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLVGALS*LVTRML Trigger: GAGCATCCTGGTGACCAGCCAGGATAAGGCTCCGAC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGTGGAGCTCTCAGCAGTaGGTGCCAGCAGAGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRWSSQQ*VPAEVP Trigger: CGGCACCTCTGCTGGCACCCACTGCTGAGAGCTCCA...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCATCTACCGTACCTTTTaGACAGCAGGTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAIYRTF*TAGLAP Trigger: AGGTGCTAGACCTGCTGTTCAAAAGGTACGGTAGAT...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAAGGAGATGGCATTTTTaGGTTGGTCCTGCGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSRRWHF*VGPAVR Trigger: GCGGACCGCAGGACCAACTCAAAAATGCCATCTCCT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTAGGAGATGGCATTTTTaGGTTGGTCCTGCGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLRRWHF*VGPAVR Trigger: GCGGACCGCAGGACCAACTCAAAAATGCCATCTCCT...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTTGACAGAAATCCTCTaGGTATTGGTCCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEALTEIL*VLVQPG Trigger: ACCTGGCTGGACCAATACTCAGAGGATTTCTGTCAA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGATGGCTCAGGCTCTTaGGGTGGCTCTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSDGSGS*GGSGTG Trigger: ACCAGTTCCAGAGCCACCTCAAGAGCCTGAGCCATC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGAGTTGGCCACGTTGTTaGACTGGGCGACAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRSWPRC*TGRQWR Trigger: GCGCCACTGTCGCCCAGTTCAACAACGTGGCCAACT...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAGGTCGCTCCAGCGCTTaGCAATGGCTGTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQGRSSA*QWLCFS Trigger: AGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACC...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTCACTGCTACTGGTGCTaGGCTCCGTGCTGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCHCYWC*APCWEP Trigger: AGGCTCCCAGCACGGAGCTCAGCACCAGTAGCAGTG...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGCACTGCTACTGGTGCTaGGCTCCGTGCTGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMHCYWC*APCWEP Trigger: AGGCTCCCAGCACGGAGCTCAGCACCAGTAGCAGTG...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGTTGTAGAGAGGCAGTaGGGAGCTGTAGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLVVERQ*GAVAAD Trigger: GTCTGCAGCTACAGCTCCTCACTGCCTCTCTACAAC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCCAGCTTGTGATCCTCTaGGATGATCTGCACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVQLVIL*DDLHQL Trigger: GAGCTGGTGCAGATCATCTCAGAGGATCACAAGCTG...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCCTGGCAGTCACCACTaGGACACAGGCAAAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLPGSHH*DTGKEH Trigger: GTGTTCTTTGCCTGTGTCTCAGTGGTGACTGCCAGG...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGGTGTAGCTGGACCTTaGGCAGGGAGATGGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLGVAGP*AGRWSR Trigger: TCTACTCCATCTCCCTGCGCAAGGTCCAGCTACACC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAATGCTGTAGTTGTTaGAGGCTGACTGTAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PGASGSMGGSDLHLGRCQQCCSC*RLTVAT Trigger: AGTTGCTACAGTCAGCCTGCAACAACTACAGCATTG...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGTGGCTGTGCTTTTCTTaGTCCTCAGGGTGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGWLCFS*SSGCCW Trigger: CCAGCAACACCCTGAGGAGCAAGAAAAGCACAGCCA...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGGCTGGTCACCAGGATaGTCTTGTACATGTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WQVSIPAAGEVQGESGVGGWSPG*SCTCCR Trigger: ACGGCAACATGTACAAGAGCATCCTGGTGACCAGCC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAAGATCAGGGTCGAGCTaGGTGAAGCTGTGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSRSGSS*VKLCST Trigger: GGTGCTGCACAGCTTCACGCAGCTCGACCCTGATCT...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTAGGTCTAGCACCTGCTaGGTGGTAGTGAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLRSSTC*VVVKAL Trigger: CAGAGCCTTCACTACCACCCAGCAGGTGCTAGACCT...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGCAGACTCAGCCTCACTaGGCTCCAGGTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRQTQPH*APGPPA Trigger: AGCTGGAGGACCTGGAGCCCAGTGAGGCTGAGTCTG...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGAGACAGCACTGGAGCTaGGGACAGGGCCTCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRRQHWS*GQGLRL Trigger: GAGTCTGAGGCCCTGTCCCCAGCTCCAGTGCTGTCT...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCTCTAAGGCAGGAGTaGGCACAGGAGCTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSALRQE*AQELTP Trigger: TGGAGTCAGCTCCTGTGCCCACTCCTGCCTTAGAGC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGTCCTCAGGGTGTTGCTaGCCGACTCAGACGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMSSGCC*PTQTGA Trigger: AGCCCCCGTCTGAGTCGGCCAGCAACACCCTGAGGA...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATTCACAGGACTTGGAGTaGGCACTGCTACTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDSQDLE*ALLLVL Trigger: CAGCACCAGTAGCAGTGCCCACTCCAAGTCCTGTGA...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCTGGTCACAGGACTTaGAGTGGGCACTGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSAGHRT*SGHCYW Trigger: CCAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATTGCACAGGAAGACAGTaGCGTAGGAAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDCTGRQ*RRKGHC Trigger: GCAGTGACCTTTCCTACGTCACTGTCTTCCTGTGCA...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTAAGCCACCAGCTGCTTaGGGCAGGGAAAGTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCKPPAA*GRESPE Trigger: CTCCGGACTTTCCCTGCCTCAAGCAGCTGGTGGCTT...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGGATGGCTCAGGCTCTTaGGGTGGCTCTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRDGSGS*GGSGTG Trigger: ACCAGTTCCAGAGCCACCTCAAGAGCCTGAGCCATC...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGAACGGTGCCCTGGATaGCTCCTGTCTCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCERCPG*LLSPSA Trigger: GGCAGAAGGAGACAGGAGTCATCCAGGGCACCGTTC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGGTCGCTCCAGCGCTTaGCAATGGCTGTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSGRSSA*QWLCFS Trigger: AGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGGTCGCTCCAGCGCTTaGCAATGGCTGTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKGRSSA*QWLCFS Trigger: AGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTGTGATCCTCTGAGATaGTCTGCACCAGCTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEACDPLR*SAPAHN Trigger: ATTATGAGCTGGTGCAGATCATCTCAGAGGATCACA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCACAGCTTGTGATCCTCTaGGATGATCTGCACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSQLVIL*DDLHQL Trigger: GAGCTGGTGCAGATCATCTCAGAGGATCACAAGCTG...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGACTCCTGTCTCCTTCTaGCGCCTCTGGGCTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRTPVSF*RLWALL Trigger: TAGGAGAGCCCAGAGGCGGCAGAAGGAGACAGGAGT...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAATGGCTGTGCTTTTCTTaGTCCTCAGGGTGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQWLCFS*SSGCCW Trigger: CCAGCAACACCCTGAGGAGCAAGAAAAGCACAGCCA...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTTGGCTGTGCTTTTCTTaGTCCTCAGGGTGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLWLCFS*SSGCCW Trigger: CCAGCAACACCCTGAGGAGCAAGAAAAGCACAGCCA...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGTGCCGAGGTAAGGGCTaGACCGAAGCTGGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMCRGKG*TEAGHR Trigger: CCTGTGACCAGCTTCGGTGCAGCCCTTACCTCGGCA...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGTGCTCTTGTACATGTTaGCGTTGTCCACATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRCSCTC*RCPHPG Trigger: GCCTGGATGTGGACAACGGCAACATGTACAAGAGCA...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTGGCTGGTCACCAGGATaGTCTTGTACATGTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLGWSPG*SCTCCR Trigger: ACGGCAACATGTACAAGAGCATCCTGGTGACCAGCC...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAATCCTGAGTCCCTTCTaGTTCATACGAGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQILSPF*FIRGRV Trigger: CACCCTCCCTCGTATGAAGCAGAAGGGACTCAGGAT...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGGCTCCTTGGTGTAGCTaGACCTTGCGCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRAPWCS*TLRREM Trigger: CATCTCCCTGCGCAAGGTCCAGCTACACCAAGGAGC...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGGCCATCAGGAGACTCTaGGACGAAGCTCATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRAIRRL*DEAHVD Trigger: ATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGC...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGCCCCAATCTCCTGCGTaGAGCTCTCAGCAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMPQSPA*SSQQWV Trigger: CACCCACTGCTGAGAGCTCCACGCAGGAGATTGGGG...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGATGGCTCAGGCTCTTaGGGTGGCTCTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCDGSGS*GGSGTG Trigger: ACCAGTTCCAGAGCCACCTCAAGAGCCTGAGCCATC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCACCATGGCTTTTCGGATaGCAGTCGGAGCCTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSPWLFG*QSEPYP Trigger: AGGATAAGGCTCCGACTGTCATCCGAAAAGCCATGG...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTTGCTCTTGTACATGTTaGCGTTGTCCACATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLCSCTC*RCPHPG Trigger: GCCTGGATGTGGACAACGGCAACATGTACAAGAGCA...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAAAATCCTCTGAGTATTaGTCCAGCCAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSKSSEY*SSQVPR Trigger: CCTGGGCACCTGGCTGGACCAATACTCAGAGGATTT...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGGCTCTAAGGCAGGAGTaGGCACAGGAGCTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMALRQE*AQELTP Trigger: TGGAGTCAGCTCCTGTGCCCACTCCTGCCTTAGAGC...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGGTCTTCTTTAGGCGGTaGATGGCATTGCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRVFFRR*MALLCR Trigger: TCTACAGAGCAATGCCATCCACCGCCTAAAGAAGAC...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGCTCGAAAGCTGTCCCTaGAGACCTCTTCCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRLESCP*RPLPTS Trigger: AGACGTGGGAAGAGGTCTCCAGGGACAGCTTTCGAG...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGTGTAGCAACTTGATCTaGGCAATGACTTCGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAWVAVICTWGGVSKVWWCSNLI*AMTSNS Trigger: GGAGTTCGAAGTCATTGCCCAGATCAAGTTGCTACA...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGTCACAGGACTTGGAGTaGGCACTGCTACTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRSQDLE*ALLLVL Trigger: CAGCACCAGTAGCAGTGCCCACTCCAAGTCCTGTGA...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGGCTGGTCACAGGACTTaGAGTGGGCACTGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMAGHRT*SGHCYW Trigger: CCAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGC...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAGCCATCAGGAGACTCTaGGACGAAGCTCATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQAIRRL*DEAHVD Trigger: ATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGC...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGTCGGAGCCTTATCCTaGCTGGTCACCAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCVGALS*LVTRML Trigger: GAGCATCCTGGTGACCAGCCAGGATAAGGCTCCGAC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| 3UTR CAA 72 bp | TGCTTCATACGAGGGAGGGTGGAGCTGGCTCCATGCTaGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFIRGRVELAPC*TLAPLVKVRFF Trigger: AAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTATGAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGTGCACAGGAAGACAGTaGCGTAGGAAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRCTGRQ*RRKGHC Trigger: GCAGTGACCTTTCCTACGTCACTGTCTTCCTGTGCA...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATATCTACCGTACCTTTTaGACAGCAGGTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDIYRTF*TAGLAP Trigger: AGGTGCTAGACCTGCTGTTCAAAAGGTACGGTAGAT...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTATCTACCGTACCTTTTaGACAGCAGGTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLIYRTF*TAGLAP Trigger: AGGTGCTAGACCTGCTGTTCAAAAGGTACGGTAGAT...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCTGTGATCCTCTGAGATaGTCTGCACCAGCTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVCDPLR*SAPAHN Trigger: ATTATGAGCTGGTGCAGATCATCTCAGAGGATCACA...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCATGCAGCCATATCTTTTaGACAGCAGGTCTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSCSHIF*TAGLAP Trigger: AGGTGCTAGACCTGCTGTTCAAAAGATATGGCTGCA...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTGGAATCTTCAGTGTaGTCCTCTGAGATGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLLESSV*SSEMIC Trigger: GCAGATCATCTCAGAGGATCACACTGAAGATTCCAG...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGGCGGTGGATGGCATTaGTCTGTAGAGCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCGGGWH*SVEQRG Trigger: TCCTCTCTGCTCTACAGAGCAATGCCATCCACCGCC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGGGCGGTGGATGGCATTaGTCTGTAGAGCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMGGGWH*SVEQRG Trigger: TCCTCTCTGCTCTACAGAGCAATGCCATCCACCGCC...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGCAATGCTGTAGTTGTTaGAGGCTGACTGTAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RATLVCKCLVSSQSARPRQCCSC*RLTVAT Trigger: AGTTGCTACAGTCAGCCTGCAACAACTACAGCATTG...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCATGCTCTTGTACATGTTaGCGTTGTCCACATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSCSCTC*RCPHPG Trigger: GCCTGGATGTGGACAACGGCAACATGTACAAGAGCA...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTCCTCCACATCAGAGCTaGAAGAGCCAGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCPPHQS*KSQLSA Trigger: TGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGG...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGCCTCCACATCAGAGCTaGAAGAGCCAGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMPPHQS*KSQLSA Trigger: TGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGG...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCATCAGGAGACTCTaGGACGAAGCTCATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCVARATLVCKCLVSSQSAIRRL*DEAHVD Trigger: ATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTTCTCTTTTCAAAGTTaGTCAGTCTCCCATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWFQRAEGTEGGKWSPEAFSFQS*SVSHRD Trigger: ATCTCTATGGGAGACTGATCAACTTTGAAAAGAGAA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGCCATGGCTTTTCGGATaGCAGTCGGAGCCTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMPWLFG*QSEPYP Trigger: AGGATAAGGCTCCGACTGTCATCCGAAAAGCCATGG...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATTGTGATCCTCTGAGATaGTCTGCACCAGCTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDCDPLR*SAPAHN Trigger: ATTATGAGCTGGTGCAGATCATCTCAGAGGATCACA...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTGGCTGGTCACCAGGATaGTCTTGTACATGTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCGWSPG*SCTCCR Trigger: ACGGCAACATGTACAAGAGCATCCTGGTGACCAGCC...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTATCCTGAGTCCCTTCTaGTTCATACGAGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCILSPF*FIRGRV Trigger: CACCCTCCCTCGTATGAAGCAGAAGGGACTCAGGAT...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGAAATCCTCTGAGTATTaGTCCAGCCAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMKSSEY*SSQVPR Trigger: CCTGGGCACCTGGCTGGACCAATACTCAGAGGATTT...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAATGTAGCAACTTGATCTaGGCAATGACTTCGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQCSNLI*AMTSNS Trigger: GGAGTTCGAAGTCATTGCCCAGATCAAGTTGCTACA...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCATGTAGCAACTTGATCTaGGCAATGACTTCGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSCSNLI*AMTSNS Trigger: GGAGTTCGAAGTCATTGCCCAGATCAAGTTGCTACA...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTTGTAGCAACTTGATCTaGGCAATGACTTCGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLCSNLI*AMTSNS Trigger: GGAGTTCGAAGTCATTGCCCAGATCAAGTTGCTACA...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCACATTGGCGTTTTCTaGAATCTTCAGCTTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VARATLVCKCLVSSQSARHIGVF*NLQLVI Trigger: GATCACAAGCTGAAGATTCCAGAAAACGCCAATGTG...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGTTGACAGAAATCCTCTaGGTATTGGTCCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRLTEIL*VLVQPG Trigger: ACCTGGCTGGACCAATACTCAGAGGATTTCTGTCAA...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGTGTGATCCTCTGAGATaGTCTGCACCAGCTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKCDPLR*SAPAHN Trigger: ATTATGAGCTGGTGCAGATCATCTCAGAGGATCACA...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGGTCTTCTTTAGGCGGTaGATGGCATTGCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRVFFRR*MALLCR Trigger: TCTACAGAGCAATGCCATCCACCGCCTAAAGAAGAC...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGGCCATCAGGAGACTCTaGGACGAAGCTCATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMAIRRL*DEAHVD Trigger: ATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGC...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCACACATTGGCGTTTTCTaGAATCTTCAGCTTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSHIGVF*NLQLVI Trigger: GATCACAAGCTGAAGATTCCAGAAAACGCCAATGTG...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATCACATTGGCGTTTTCTaGAATCTTCAGCTTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDHIGVF*NLQLVI Trigger: GATCACAAGCTGAAGATTCCAGAAAACGCCAATGTG...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCTTCTCTTTTCAAAGTTaGTCAGTCTCCCATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVFSFQS*SVSHRD Trigger: ATCTCTATGGGAGACTGATCAACTTTGAAAAGAGAA...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGCACATTGGCGTTTTCTaGAATCTTCAGTGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKHIGVF*NLQCDP Trigger: AGGATCACACTGAAGATTCCAGAAAACGCCAATGTG...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATTTCTCTTTTCAAAGTTaGTCAGTCTCCCATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDFSFQS*SVSHRD Trigger: ATCTCTATGGGAGACTGATCAACTTTGAAAAGAGAA...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGCAATGCTGTAGTTGTTaGAGGCTGACTGTAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMQCCSC*RLTVAT Trigger: AGTTGCTACAGTCAGCCTGCAACAACTACAGCATTG...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR TCA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGTTCTCTTTTCAAAGTTaGTCAGTCTCCCATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRGRVELAPCLTLAPLVKFSFQS*SVSHRD Trigger: ATCTCTATGGGAGACTGATCAACTTTGAAAAGAGAA...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS GCA 90 bp | CGGGGACGCCCACCTCCAGGCGCACGGCGTCCCACACGCTGCGGCTaGGCCGGGAACCGGGAAACAACGGCTCGGTGCCCCCTATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGRPPPGARRPTRCG*AGNRETTARCPLWA Trigger: GGCCCATAGGGGGCACCGAGCCGTTGTTTCCCGGTTCCCGGCGCAGCCGCAGCGTGTGGGACGCCGTGCGCCTGGAGGTGGGCGTCCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS GCA 90 bp | CCCACACGCTGCGGCTGCGCCGGGAACCGGGAAACAACGGCTCGGTaGCCCCTATGGGCCCGGCCGCCTCAGCCCACATGCGCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PTRCGCAGNRETTAR*PLWARPPQPTCAAP Trigger: TGGTGCAGCGCATGTGGGCTGAGGCGGCCGGGCCCATAGGGGGCACCGAGCCGTTGTTTCCCGGTTCCCGGCGCAGCCGCAGCGTGTGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS CCA 90 bp | GCAGAGGTGCCGGGCAAGGTGTCGGAGGAGTGGGAGAGTGGGCAGTaGTGCGGCGGGCAATGGCCCACCGCCTGGCAGTCACCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AEVPGKVSEEWESGQ*CGGQWPTAWQSPLR Trigger: TCTCAGTGGTGACTGCCAGGCGGTGGGCCATTGCCCGCCGCACCACTGCCCACTCTCCCACTCCTCCGACACCTTGCCCGGCACCTCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS GCA 90 bp | CCCAATCTCCTGCGTGGAGCTCTCAGCAGTGGGTGCCAGCAGAGGTaGCGGGCAAGGTGTCGGAGGAGTGGGAGAGTGGGCAGTGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PNLLRGALSSGCQQR*RARCRRSGRVGSGA Trigger: CGCACCACTGCCCACTCTCCCACTCCTCCGACACCTTGCCCGGCACCTCTGCTGGCACCCACTGCTGAGAGCTCCACGCAGGAGATTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTGTCAATCCCGGCAGCAGGAGAGGTTCAGGGTGAAAGTGGAGTAGGGGGCGCGAGGTGCTCCTaGCCCTTCTTGTCCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQVSIPAAGEVQGESGVGGARCS*PFLSRW Trigger: CCAACGGGACAAGAAGGGCAAGGAGCACCTCGCGCC...CCCTACTCCACTTTCACCCTGAACCTCTCCTGCTGCCGGGATTGACACCTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCAGTTGGCCACGTTGTaGAACTGGGCGACAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAWVAVICTWGGVSKVWWQLATL*NWATVA Trigger: CGCCACTGTCGCCCAGTTCAACAACGTGGCCAACTG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCCGGTCGCTCCAGCGCTaGACAATGGCTGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWFQRAEGTEGGKWSPEARSLQR*TMAVLF Trigger: GAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCG...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCAGCTGGTCACAGGACTaGGAGTGGGCACTGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LWFQRAEGTEGGKWSPEASWSQD*EWALLL Trigger: CAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGCT...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGAGCTGGCTCCATGCTaGACTTTAGCCCCCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QASACGHKERMQSAALLGELAPC*TLAPLV Trigger: CACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGCATCCGGGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGGAGCTGGCTCCATGCTaGACTTTAGCCCCCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGASGSMGGSDLHLGRCQELAPC*TLAPLV Trigger: CACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC...CTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCCCGGATGCTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGCAGTTGGCCACGTTGTaGAACTGGGCGACAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RATLVCKCLVSSQSARPRQLATL*NWATVA Trigger: CGCCACTGTCGCCCAGTTCAACAACGTGGCCAACTG...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGAGGCGGTGGATGGCATaGCTCTGTAGAGCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAWVAVICTWGGVSKVWWRRWMA*LCRAER Trigger: CCTCTCTGCTCTACAGAGCAATGCCATCCACCGCCT...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTTTGGAGGTTCCTTCCTaGATGAGCAGCTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QASACGHKERMQSAALLGLEVPS*MSSSLL Trigger: GAGCAGAGAGCTGCTCATCAAGGAAGGAACCTCCAA...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGCGGTCGCTCCAGCGCTaGACAATGGCTGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAWVAVICTWGGVSKVWWRSLQR*TMAVLF Trigger: GAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCG...CCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS TCA 90 bp | GAAGCTCATGTTGATCTCCTCCACATCAGAGCTGGAAGAGCCAGCTaGGTGCACACTGAGCGCGTCGGTGATGTCCCCGCTGCCGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EAHVDLLHIRAGRAS*VHTERVGDVPAAEV Trigger: TACCTCGGCAGCGGGGACATCACCGACGCGCTCAGTGTGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGGAGATCAACATGAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATCAGTTGGCCACGTTGTaGAACTGGGCGACAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDQLATL*NWATVA Trigger: CGCCACTGTCGCCCAGTTCAACAACGTGGCCAACTG...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTAGGCGGTGGATGGCATaGCTCTGTAGAGCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VARATLVCKCLVSSQSARRRWMA*LCRAER Trigger: CCTCTCTGCTCTACAGAGCAATGCCATCCACCGCCT...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGCTGACTGTAGCAACTaGATCTGGGCAATGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QASACGHKERMQSAALLGADCSN*IWAMTS Trigger: CGAAGTCATTGCCCAGATCAAGTTGCTACAGTCAGC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCCGGTCGCTCCAGCGCTaGACAATGGCTGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVRSLQR*TMAVLF Trigger: GAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCG...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTTGTACATGTTGCCGTaGTCCACATCCAGGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LWFQRAEGTEGGKWSPEALYMLP*STSRLT Trigger: GGTCAGCCTGGATGTGGACAACGGCAACATGTACAA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS TCA 90 bp | CCAGGAGAAGGTGAGCGCGGCGCTCCAGATCTGAGCCAGGCATGTTaGGCTGTACATAAGCCACCAGTTTTTGAGTTGGTCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGEGERGAPDLSQAC*AVHKPPVFELVLRS Trigger: GGACCGCAGGACCAACTCAAAAACTGGTGGCTTATGTACAGCTCAACATGCCTGGCTCAGATCTGGAGCGCCGCGCTCACCTTCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137215.3 |
||
| CDS GCA 90 bp | GCACCAGGTGTTCCACCAGCTTCTCCAGAGTACCAGCCTTCACCGTaGGCACCTTGCAGGTCTCATAGAGGTTCAGAGCCGACTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: APGVPPASPEYQPSP*APCRSHRGSEPTRS Trigger: AGAACGAGTCGGCTCTGAACCTCTATGAGACCTGCAAGGTGCGCACGGTGAAGGCTGGTACTCTGGAGAAGCTGGTGGAACACCTGGTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000135803.8 ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGGAGGAGATGGCATTTTaGAGTTGGTCCTGCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RATLVCKCLVSSQSARPREEMAF*SWSCGP Trigger: CGGACCGCAGGACCAACTCAAAAATGCCATCTCCTC...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGAGGAGATGGCATTTTaGAGTTGGTCCTGCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVEEMAF*SWSCGP Trigger: CGGACCGCAGGACCAACTCAAAAATGCCATCTCCTC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGACACAGTTGGCCACGTaGTTGAACTGGGCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RATLVCKCLVSSQSARPRTQLAT*LNWATV Trigger: CACTGTCGCCCAGTTCAACAACGTGGCCAACTGTGT...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCACACAGTTGGCCACGTaGTTGAACTGGGCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVTQLAT*LNWATV Trigger: CACTGTCGCCCAGTTCAACAACGTGGCCAACTGTGT...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGTGCCTGTGGGCACAAGGAGAGAATGCAGTCGGCAGCCCTGCTGGGTGTAGTAATGACACAGTaGGCCACGTTGTTGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QASACGHKERMQSAALLGVVMTQ*ATLLNW Trigger: CCAGTTCAACAACGTGGCCAACTGTGTCATTACTAC...ACCCAGCAGGGCTGCCGACTGCATTCTCTCCTTGTGCCCACAGGCACTGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAAGGCGGTGGATGGCATaGCTCTGTAGAGCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSRRWMA*LCRAER Trigger: CCTCTCTGCTCTACAGAGCAATGCCATCCACCGCCT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTAGGCGGTGGATGGCATaGCTCTGTAGAGCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLRRWMA*LCRAER Trigger: CCTCTCTGCTCTACAGAGCAATGCCATCCACCGCCT...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAGCTGGTCACAGGACTaGGAGTGGGCACTGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQSWSQD*EWALLL Trigger: CAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGCT...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAAGCTGGTCACAGGACTaGGAGTGGGCACTGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSSWSQD*EWALLL Trigger: CAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGCT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS GCA 90 bp | GTTCCACCAGCTTCTCCAGAGTACCAGCCTTCACCGTGCGCACCTTaGAGGTCTCATAGAGGTTCAGAGCCGACTCGTTCTCACACCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VPPASPEYQPSPCAP*RSHRGSEPTRSHTL Trigger: TAGGGTGTGAGAACGAGTCGGCTCTGAACCTCTATGAGACCTGCAAGGTGCGCACGGTGAAGGCTGGTACTCTGGAGAAGCTGGTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000135803.8 ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGAGGAGATGGCATTTTaGAGTTGGTCCTGCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDEEMAF*SWSCGP Trigger: CGGACCGCAGGACCAACTCAAAAATGCCATCTCCTC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGCAGTTGGCCACGTTGTaGAACTGGGCGACAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRQLATL*NWATVA Trigger: CGCCACTGTCGCCCAGTTCAACAACGTGGCCAACTG...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAACACAGTTGGCCACGTaGTTGAACTGGGCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSTQLAT*LNWATV Trigger: CACTGTCGCCCAGTTCAACAACGTGGCCAACTGTGT...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGTTGGAGGTTCCTTCCTaGATGAGCAGCTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RATLVCKCLVSSQSARPRLEVPS*MSSSLL Trigger: GAGCAGAGAGCTGCTCATCAAGGAAGGAACCTCCAA...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGCGGTCGCTCCAGCGCTaGACAATGGCTGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IRGRVELAPCLTLAPLVKRSLQR*TMAVLF Trigger: GAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCG...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGAGCTGGTCACAGGACTaGGAGTGGGCACTGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: IRGRVELAPCLTLAPLVKSWSQD*EWALLL Trigger: CAGTAGCAGTGCCCACTCCAAGTCCTGTGACCAGCT...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCGGGACGAAGCTCATGTaGATCTCCTCCACATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVGTKLM*ISSTSE Trigger: CTCTGATGTGGAGGAGATCAACATGAGCTTCGTCCC...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTCCCAGGGGGACGAAGCTCATGTaGATCTCCTCCACATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RATLVCKCLVSSQSARPRGTKLM*ISSTSE Trigger: CTCTGATGTGGAGGAGATCAACATGAGCTTCGTCCC...CCTGGGACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTTTGTACATGTTGCCGTaGTCCACATCCAGGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: VARATLVCKCLVSSQSARLYMLP*STSRLT Trigger: GGTCAGCCTGGATGTGGACAACGGCAACATGTACAA...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCTTGTACATGTTGCCGTaGTCCACATCCAGGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: VQGRQGPMPSWQHSLAKVLYMLP*STSRLT Trigger: GGTCAGCCTGGATGTGGACAACGGCAACATGTACAA...GACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGAGGAGATGGCATTTTaGAGTTGGTCCTGCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IRGRVELAPCLTLAPLVKEEMAF*SWSCGP Trigger: CGGACCGCAGGACCAACTCAAAAATGCCATCTCCTC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGACACAGTTGGCCACGTaGTTGAACTGGGCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IRGRVELAPCLTLAPLVKTQLAT*LNWATV Trigger: CACTGTCGCCCAGTTCAACAACGTGGCCAACTGTGT...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTTTGGAGGTTCCTTCCTaGATGAGCAGCTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLLEVPS*MSSSLL Trigger: GAGCAGAGAGCTGCTCATCAAGGAAGGAACCTCCAA...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGGGACGAAGCTCATGTaGATCTCCTCCACATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSGTKLM*ISSTSE Trigger: CTCTGATGTGGAGGAGATCAACATGAGCTTCGTCCC...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTTTGTACATGTTGCCGTaGTCCACATCCAGGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: EGGAGSMLDFSPLSEGPLLYMLP*STSRLT Trigger: GGTCAGCCTGGATGTGGACAACGGCAACATGTACAA...AAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTTTCAGAGAGCAGAAGGCACCGAAGGCGGCAAGTGGTCCCCAGAGGCCTCGTCCTCATCTAGGTaGTGTTTGTCCATGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWFQRAEGTEGGKWSPEASSSSR*CLSMAF Trigger: AAAAGCCATGGACAAACACAACCTAGATGAGGACGA...GGCCTCTGGGGACCACTTGCCGCCTTCGGTGCCTTCTGCTCTCTGAAACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGAGCTGGCTCCATGCTaGACTTTAGCCCCCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCVARATLVCKCLVSSQSELAPC*TLAPLV Trigger: CACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS TCA 90 bp | CCGGCTCGTCCTCATCTAGGTTGTGTTTGTCCATGGCTTTTCGGATaGCAGTCGGAGCCTTATCCTGGCTGGTCACCAGGATGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PARPHLGCVCPWLFG*QSEPYPGWSPGCSC Trigger: ACAAGAGCATCCTGGTGACCAGCCAGGATAAGGCTCCGACTGTCATCCGAAAAGCCATGGACAAACACAACCTAGATGAGGACGAGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000140704.2 ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTGTAGTAATGACACAGTaGGCCACGTTGTTGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VARATLVCKCLVSSQSARVVMTQ*ATLLNW Trigger: CCAGTTCAACAACGTGGCCAACTGTGTCATTACTAC...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAAAGTCAGCTGACTGTAGCAACTaGATCTGGGCAATGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGKVPCPVGNTPWQKSADCSN*IWAMTS Trigger: CGAAGTCATTGCCCAGATCAAGTTGCTACAGTCAGC...TGACTTTTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAGCTGACTGTAGCAACTaGATCTGGGCAATGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQADCSN*IWAMTS Trigger: CGAAGTCATTGCCCAGATCAAGTTGCTACAGTCAGC...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTGTCCAGGGCAGGCAAGGTCCCATGCCCAGTTGGCAACACTCCTTGGCAAATGCTCTTGTACATGTaGCCGTTGTCCACATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVSRAGKVPCPVGNTPWQMLLYM*PLSTSR Trigger: CCTGGATGTGGACAACGGCAACATGTACAAGAGCAT...TTGCCAAGGAGTGTTGCCAACTGGGCATGGGACCTTGCCTGCCCTGGACACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGGTGGCAGTGATCTGCACCTGGGGAGGTGTCAGCAAAGTGTGGTGGATGTAGTAATGACACAGTaGGCCACGTTGTTGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMGGSDLHLGRCQQSVVDVVMTQ*ATLLNW Trigger: CCAGTTCAACAACGTGGCCAACTGTGTCATTACTAC...ATCCACCACACTTTGCTGACACCTCCCCAGGTGCAGATCACTGCCACCCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGCTGACTGTAGCAACTaGATCTGGGCAATGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: IRGRVELAPCLTLAPLVKADCSN*IWAMTS Trigger: CGAAGTCATTGCCCAGATCAAGTTGCTACAGTCAGC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGGGGACGAAGCTCATGTaGATCTCCTCCACATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRGTKLM*ISSTSE Trigger: CTCTGATGTGGAGGAGATCAACATGAGCTTCGTCCC...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGTGTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAATGCTCTTGTACATGTaGCCGTTGTCCACATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCVARATLVCKCLVSSQSMLLYM*PLSTSR Trigger: CCTGGATGTGGACAACGGCAACATGTACAAGAGCAT...TGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCACACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCCAGGGCCACTCTAGTCTGTAAGTGCTTAGTCTCCAGCCAGTCAGCCCGTTCGTCCTCATCTAGGTaGTGTTTGTCCATGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VARATLVCKCLVSSQSARSSSSR*CLSMAF Trigger: AAAAGCCATGGACAAACACAACCTAGATGAGGACGA...ACGGGCTGACTGGCTGGAGACTAAGCACTTACAGACTAGAGTGGCCCTGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | ATACGAGGGAGGGTGGAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTAGTAATGACACAGTaGGCCACGTTGTTGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: IRGRVELAPCLTLAPLVKVVMTQ*ATLLNW Trigger: CCAGTTCAACAACGTGGCCAACTGTGTCATTACTAC...CTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTCCACCCTCCCTCGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | AATGTTCAGTTGTCTTCCTCCTCCCCACAAACCTCCCACTGCGTGTCGTCTTGTTTGGAGGTTCCTTCCTaGATGAGCAGCTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NVQLSSSSPQTSHCVSSCLEVPS*MSSSLL Trigger: GAGCAGAGAGCTGCTCATCAAGGAAGGAACCTCCAA...ACAAGACGACACGCAGTGGGAGGTTTGTGGGGAGGAGGAAGACAACTGAACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028170.15 ENSMUST00000113893.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGATGATGCTCTTGTACATGTaGCCGTTGTCCACATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPCLTLAPLVKVRFFRMMLLYM*PLSTSR Trigger: CCTGGATGTGGACAACGGCAACATGTACAAGAGCAT...CATCCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGCTCCATGCTTGACTTTAGCCCCCTTAGTGAAGGTCCGCTTCTTTAGGTCGTCCTCATCTAGGTaGTGTTTGTCCATGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELAPCLTLAPLVKVRFFRSSSSR*CLSMAF Trigger: AAAAGCCATGGACAAACACAACCTAGATGAGGACGA...CCTAAAGAAGCGGACCTTCACTAAGGGGGCTAAAGTCAAGCATGGAGCCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS TCA 90 bp | GAACACATTGGCGTTTTCTGGAATCTTCAGTGTGATCCTCTGAGATaGTCTGCACCAGCTCATAATCCTCCGGCTCGTCCTCATCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EHIGVFWNLQCDPLR*SAPAHNPPARPHLG Trigger: ACCTAGATGAGGACGAGCCGGAGGATTATGAGCTGGTGCAGATCATCTCAGAGGATCACACTGAAGATTCCAGAAAACGCCAATGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS GCA 72 bp | CCACCTCCAGGCGCACGGCGTCCCACACGCTGCGGCTaGGCCGGGAACCGGGAAACAACGGCTCGGTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPGARRPTRCG*AGNRETTARCP Trigger: GGGGCACCGAGCCGTTGTTTCCCGGTTCCCGGCGCAGCCGCAGCGTGTGGGACGCCGTGCGCCTGGAGGTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS GCA 72 bp | GGACGCCCACCTCCAGGCGCACGGCGTCCCACACGCTaGGGCTGCGCCGGGAACCGGGAAACAACGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GRPPPGARRPTR*GCAGNRETTAR Trigger: CCGAGCCGTTGTTTCCCGGTTCCCGGCGCAGCCGCAGCGTGTGGGACGCCGTGCGCCTGGAGGTGGGCGTCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS GCA 72 bp | TGCGGCTGCGCCGGGAACCGGGAAACAACGGCTCGGTaGCCCCTATGGGCCCGGCCGCCTCAGCCCACATGC | + |
|
Preference number: 6 (lower is better) Translates to: CGCAGNRETTAR*PLWARPPQPTC Trigger: GCATGTGGGCTGAGGCGGCCGGGCCCATAGGGGGCACCGAGCCGTTGTTTCCCGGTTCCCGGCGCAGCCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS CCA 72 bp | CCGGGCAAGGTGTCGGAGGAGTGGGAGAGTGGGCAGTaGTGCGGCGGGCAATGGCCCACCGCCTGGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGKVSEEWESGQ*CGGQWPTAWQS Trigger: TGACTGCCAGGCGGTGGGCCATTGCCCGCCGCACCACTGCCCACTCTCCCACTCCTCCGACACCTTGCCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS GCA 72 bp | GGCAAGGTGTCGGAGGAGTGGGAGAGTGGGCAGTGGTaGGGCGGGCAATGGCCCACCGCCTGGCAGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GKVSEEWESGQW*GGQWPTAWQSP Trigger: TGGTGACTGCCAGGCGGTGGGCCATTGCCCGCCGCACCACTGCCCACTCTCCCACTCCTCCGACACCTTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS GCA 72 bp | CTGCGTGGAGCTCTCAGCAGTGGGTGCCAGCAGAGGTaGCGGGCAAGGTGTCGGAGGAGTGGGAGAGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRGALSSGCQQR*RARCRRSGRVG Trigger: GCCCACTCTCCCACTCCTCCGACACCTTGCCCGGCACCTCTGCTGGCACCCACTGCTGAGAGCTCCACGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS CCA 72 bp | ATCAGGGTCGAGCTGCGTGAAGCTGTGCAGCACCACTaGGCAGCTGTCGGGGACGCCCACCTCCAGGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: IRVELREAVQHH*AAVGDAHLQAH Trigger: GTGCGCCTGGAGGTGGGCGTCCCCGACAGCTGCCCAGTGGTGCTGCACAGCTTCACGCAGCTCGACCCTGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100241.10 ENSMUST00000113893.8 |
||
| CDS CCA 72 bp | GAGGAGTGGGAGAGTGGGCAGTGGTGCGGCGGGCAATaGCCCACCGCCTGGCAGTCACCACTGAGACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EEWESGQWCGGQ*PTAWQSPLRHR Trigger: CCTGTGTCTCAGTGGTGACTGCCAGGCGGTGGGCCATTGCCCGCCGCACCACTGCCCACTCTCCCACTCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS CCA 72 bp | AGTGGGCAGTGGTGCGGCGGGCAATGGCCCACCGCCTaGCAGTCACCACTGAGACACAGGCAAAGAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: SGQWCGGQWPTA*QSPLRHRQRTL Trigger: CAGTGTTCTTTGCCTGTGTCTCAGTGGTGACTGCCAGGCGGTGGGCCATTGCCCGCCGCACCACTGCCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238699.2 |
||
| CDS TCA 72 bp | GCTCCGTGCTGGGAGCCTGGCGGTCGCTCCAGCGCTTaGCAATGGCTGTGCTTTTCTTGCTCCTCAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: APCWEPGGRSSA*QWLCFSCSSGC Trigger: ACACCCTGAGGAGCAAGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCGCCAGGCTCCCAGCACGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS GCA 72 bp | ATCTCCTCCACATCAGAGCTGGAAGAGCCAGCTGAGTaGACACTGAGCGCGTCGGTGATGTCCCCGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ISSTSELEEPAE*TLSASVMSPLP Trigger: CGGCAGCGGGGACATCACCGACGCGCTCAGTGTGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS CAA 72 bp | AGCTCCGTGCTGGGAGCCTGGCGGTCGCTCCAGCGCTaGACAATGGCTGTGCTTTTCTTGCTCCTCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSVLGAWRSLQR*TMAVLFLLLRV Trigger: CACCCTGAGGAGCAAGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCGCCAGGCTCCCAGCACGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS CAA 90 bp | CTCCAGCGCTTGACAATGGCTGTGCTTTTCTTGCTCCTCAGGGTGTaGCTGGCCGACTCAGACGGGGGCTCCAGCTCACACGACAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQRLTMAVLFLLLRV*LADSDGGSSSHDRV Trigger: CACCCTGTCGTGTGAGCTGGAGCCCCCGTCTGAGTCGGCCAGCAACACCCTGAGGAGCAAGAAAAGCACAGCCATTGTCAAGCGCTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS CAA 72 bp | CGGTCGCTCCAGCGCTTGACAATGGCTGTGCTTTTCTaGCTCCTCAGGGTGTTGCTGGCCGACTCAGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLQRLTMAVLF*LLRVLLADSDG Trigger: CCCGTCTGAGTCGGCCAGCAACACCCTGAGGAGCAAGAAAAGCACAGCCATTGTCAAGCGCTGGAGCGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS TCA 72 bp | GTTGATCTCCTCCACATCAGAGCTGGAAGAGCCAGCTaGGTGCACACTGAGCGCGTCGGTGATGTCCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VDLLHIRAGRAS*VHTERVGDVPA Trigger: AGCGGGGACATCACCGACGCGCTCAGTGTGCACTCAGCTGGCTCTTCCAGCTCTGATGTGGAGGAGATCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS TCA 72 bp | GCTGATGCCAGAGGTCTCTGGGGACGACTGGGAGGCTaGCTCCCAGAACTTCTTTTCCTGGCCATCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ADARGLWGRLGG*LPELLFLAIRR Trigger: TCTCCTGATGGCCAGGAAAAGAAGTTCTGGGAGTCAGCCTCCCAGTCGTCCCCAGAGACCTCTGGCATCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS GCA 72 bp | GTTCCACCAGCTTCTCCAGAGTACCAGCCTTCACCGTaGGCACCTTGCAGGTCTCATAGAGGTTCAGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VPPASPEYQPSP*APCRSHRGSEP Trigger: CGGCTCTGAACCTCTATGAGACCTGCAAGGTGCGCACGGTGAAGGCTGGTACTCTGGAGAAGCTGGTGGAAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000135803.8 ENSMUST00000238699.2 |
||
| CDS CAA 72 bp | TTGACAATGGCTGTGCTTTTCTTGCTCCTCAGGGTGTaGCTGGCCGACTCAGACGGGGGCTCCAGCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LTMAVLFLLLRV*LADSDGGSSSH Trigger: GTGTGAGCTGGAGCCCCCGTCTGAGTCGGCCAGCAACACCCTGAGGAGCAAGAAAAGCACAGCCATTGTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS TCA 72 bp | CCTGGCCATCAGGAGACTCTGGGACGAAGCTCATGTTaGTCTCCTCCACATCAGAGCTGGAAGAGCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGHQETLGRSSC*SPPHQSWKSQL Trigger: CAGCTGGCTCTTCCAGCTCTGATGTGGAGGAGATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000140704.2 ENSMUST00000238699.2 |
||
| CDS GCA 72 bp | GCTTCTCCAGAGTACCAGCCTTCACCGTGCGCACCTTaGAGGTCTCATAGAGGTTCAGAGCCGACTCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASPEYQPSPCAP*RSHRGSEPTRS Trigger: AGAACGAGTCGGCTCTGAACCTCTATGAGACCTGCAAGGTGCGCACGGTGAAGGCTGGTACTCTGGAGAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000135803.8 ENSMUST00000238699.2 |
||
| CDS CCA 72 bp | TCCCTGGAGACCTCTTCCCACGTCTTCTTTAGGCGGTaGATGGCATTGCTCTGTAGAGCAGAGAGGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLETSSHVFFRR*MALLCRAERMA Trigger: CGCCATCCTCTCTGCTCTACAGAGCAATGCCATCCACCGCCTAAAGAAGACGTGGGAAGAGGTCTCCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||
| CDS CAA 72 bp | TCCTGGCCATCAGGAGACTCTGGGACGAAGCTCATGTaGATCTCCTCCACATCAGAGCTGGAAGAGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWPSGDSGTKLM*ISSTSELEEPA Trigger: AGCTGGCTCTTCCAGCTCTGATGTGGAGGAGATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000140704.2 ENSMUST00000238699.2 |
||
| CDS CCA 72 bp | GTCGCCCACCTTCTTTTCCTGGCCATCAGGAGACTCTaGGACGAAGCTCATGTTGATCTCCTCCACATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VAHLLFLAIRRL*DEAHVDLLHIR Trigger: TCTGATGTGGAGGAGATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGCCAGGAAAAGAAGGTGGGCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140704.2 |
||
| CDS TCA 72 bp | CCTCATCTAGGTTGTGTTTGTCCATGGCTTTTCGGATaGCAGTCGGAGCCTTATCCTGGCTGGTCACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PHLGCVCPWLFG*QSEPYPGWSPG Trigger: TCCTGGTGACCAGCCAGGATAAGGCTCCGACTGTCATCCGAAAAGCCATGGACAAACACAACCTAGATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000140704.2 ENSMUST00000238699.2 |
||
| CDS CCA 72 bp | CTCCCAGAACTTCTTTTCCTGGCCATCAGGAGACTCTaGGACGAAGCTCATGTTGATCTCCTCCACATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPELLFLAIRRL*DEAHVDLLHIR Trigger: TCTGATGTGGAGGAGATCAACATGAGCTTCGTCCCAGAGTCTCCTGATGGCCAGGAAAAGAAGTTCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028170.15 ENSMUST00000100241.10 ENSMUST00000113893.8 ENSMUST00000238699.2 |
||