Pregenerated sensors for RALGAPA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021027Ensembl transcript IDs: ENSMUST00000085385.7, ENSMUST00000110687.8, ENSMUST00000219323.2, ENSMUST00000219432.2, ENSMUST00000220367.2, ENSMUST00000226244.2
Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTaGCGCTATCACCTGCACTGCCCAGAAATGAGATACCAACTTGGG | + |
Preference number: 1 (lower is better) Translates to: TEIKGQWWASWVLSM*RYHLHCPEMRYQLG Trigger: CCCAAGTTGGTATCTCATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR CCA 90 bp | TACCAACTTGGGAAGAAAATGTTACCACATGTAAGTAATTTCAGTTaGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGT | + |
Preference number: 1 (lower is better) Translates to: YQLGKKMLPHVSNFS*NLSCCTAIRSVSLC Trigger: ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR GCA 90 bp | AAAATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTaGACTGCCATTAGGAGTGTTTCTCTCTGTAACACAAATACTCTG | + |
Preference number: 1 (lower is better) Translates to: KMLPHVSNFSWNLSC*TAIRSVSLCNTNTL Trigger: CAGAGTATTTGTGTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR CCA 90 bp | TGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAGTCTACCTGTGCTGCTaGGGCAGCGTCACTGGGTGG | + |
Preference number: 2 (lower is better) Translates to: WWASWVLSMCRYHLHCPEVYLCC*GSVTGW Trigger: CCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGAC...TTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 |
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3UTR-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGATTTCAGTTGGAATCTaGGCTGCTGCACTGCCATTA | + |
Preference number: 2 (lower is better) Translates to: WASWVLSMCRYHLHCPEMISVGI*AAALPL Trigger: TAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAAT...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR GCA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCATGTGACAAACAGATGTaGAGCTTTGCTCTAGCTCTC | + |
Preference number: 2 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSCDKQM*SFALAL Trigger: GAGAGCTAGAGCAAAGCTGCACATCTGTTTGTCACA...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR CCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATAGTCTACCTGTGCTGCTaGGGCAGCGTCACTGGGTGG | + |
Preference number: 2 (lower is better) Translates to: HTGINWSIIKDHSLKTEIVYLCC*GSVTGW Trigger: CCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGAC...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 |
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3UTR-3UTR TCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTGTGTACAGCCTATGTaGCAAACAGATGTGCAGCTT | + |
Preference number: 2 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGCVQPM*QTDVQL Trigger: AAGCTGCACATCTGTTTGTCACATAGGCTGTACACA...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR GCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCGCTATCACCTGCACTaGCCAGAAATGAGATACCAA | + |
Preference number: 2 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVRYHLH*PEMRYQ Trigger: TTGGTATCTCATTTCTGGGCAGTGCAGGTGATAGCG...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGTGTGTACAGCCTATGTaGCAAACAGATGTGCAGCTT | + |
Preference number: 2 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVCVQPM*QTDVQL Trigger: AAGCTGCACATCTGTTTGTCACATAGGCTGTACACA...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR GCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCCGCTATCACCTGCACTaGCCAGAAATGAGATACCAA | + |
Preference number: 2 (lower is better) Translates to: ETAYLLQEILLEVGCIPTRYHLH*PEMRYQ Trigger: TTGGTATCTCATTTCTGGGCAGTGCAGGTGATAGCG...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR GCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCTGTGACAAACAGATGTaGAGCTTTGCTCTAGCTCTC | + |
Preference number: 2 (lower is better) Translates to: ETAYLLQEILLEVGCIPTCDKQM*SFALAL Trigger: GAGAGCTAGAGCAAAGCTGCACATCTGTTTGTCACA...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR CCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGGTAAGTAATTTCAGTTaGAATCTGAGCTGCTGCACT | + |
Preference number: 2 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGVSNFS*NLSCCT Trigger: AGTGCAGCAGCTCAGATTCCAACTGAAATTACTTAC...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR TCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTATGTGTACAGCCTATGTaGCAAACAGATGTGCAGCTT | + |
Preference number: 2 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVCVQPM*QTDVQL Trigger: AAGCTGCACATCTGTTTGTCACATAGGCTGTACACA...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR TCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAATTTCAGTTGGAATCTaGGCTGCTGCACTGCCATTA | + |
Preference number: 2 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVISVGI*AAALPL Trigger: TAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAAT...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR CCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTAATGAGATACCAACTTaGGAAGAAAATGTTACCACA | + |
Preference number: 2 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSNEIPT*EENVTT Trigger: TGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATT...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR TCA 72 bp | CGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTaGGTATGTGCCGCTATCACCTGCACTGCCCAGAAA | + |
Preference number: 3 (lower is better) Translates to: RKSKVSGGLPGY*VCAAITCTAQK Trigger: TTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR GCA 72 bp | AAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTaGCGCTATCACCTGCACTGCCCAGAAATGAGATAC | + |
Preference number: 3 (lower is better) Translates to: KGQWWASWVLSM*RYHLHCPEMRY Trigger: GTATCTCATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR CAA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCAGCTTGCCTAGCATGCTaGGGATACTGGCTTCTATTC | + |
Preference number: 3 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSACLAC*GYWLLF Trigger: GAATAGAAGCCAGTATCCCAAGCATGCTAGGCAAGC...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR GCA 72 bp | AAATGTGTAGCACTGGGCTGTGAAGGACAGTGTGCTTaGCTAGCATGCTTGGGATACTGGCTTCTATTCCCA | + |
Preference number: 3 (lower is better) Translates to: KCVALGCEGQCA*LACLGYWLLFP Trigger: TGGGAATAGAAGCCAGTATCCCAAGCATGCTAGGCAAGCACACTGTCCTTCACAGCCCAGTGCTACACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR-3UTR CAA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACGCTTGCCTAGCATGCTaGGGATACTGGCTTCTATTC | + |
Preference number: 3 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNACLAC*GYWLLF Trigger: GAATAGAAGCCAGTATCCCAAGCATGCTAGGCAAGC...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR TCA 72 bp | CTCTCTGTAACACAAATACTCTGTGTACAGCCTATGTaGCAAACAGATGTGCAGCTTTGCTCTAGCTCTCTA | + |
Preference number: 3 (lower is better) Translates to: LSVTQILCVQPM*QTDVQLCSSSL Trigger: TAGAGAGCTAGAGCAAAGCTGCACATCTGTTTGTCACATAGGCTGTACACAGAGTATTTGTGTTACAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR GCA 72 bp | CCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTaGACTGCCATTAGGAGTGTTTCTCTCTGTAACACA | + |
Preference number: 3 (lower is better) Translates to: PHVSNFSWNLSC*TAIRSVSLCNT Trigger: TGTGTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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3UTR CCA 72 bp | GGGAAGAAAATGTTACCACATGTAAGTAATTTCAGTTaGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTT | + |
Preference number: 3 (lower is better) Translates to: GKKMLPHVSNFS*NLSCCTAIRSV Trigger: AACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACATTTTCTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGGATGGGGAGGGGGTCTaGGACCTGGATCCCAGAGCT | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMDGEGV*DLDPRA Trigger: AGCTCTGGGATCCAGGTCGCAGACCCCCTCCCCATC...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGGTCTACCTGTGCTGCTaGGGCAGCGTCACTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQVYLCC*GSVTGW Trigger: CCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGAC...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGAGGTCATCCGGCGTCTaGAGAACAGAGTGGTGGAGC | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMRSSGV*RTEWWS Trigger: GCTCCACCACTCTGTTCTTCAGACGCCGGATGACCT...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GTCAGCCCCGTCTACCTGTGCTGCTGGGGCAGCGTCACTGGGTGGAATCTCTGGCTCTCCATCTTCTATTaGACTGTCATGGTCTGCAAC | + |
Preference number: 4 (lower is better) Translates to: VSPVYLCCWGSVTGWNLWLSIFY*TVMVCN Trigger: GTTGCAGACCATGACAGTGCAATAGAAGATGGAGAG...CCAGAGATTCCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGACGGGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 |
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CDS-3UTR GCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGGATGGGGAGGGGGTCTaGGACCTGGATCCCAGAGCT | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPDGEGV*DLDPRA Trigger: AGCTCTGGGATCCAGGTCGCAGACCCCCTCCCCATC...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GTCAGCCCCGTCTACCTGTGCTGCTGGGGCAGCGTCACTGGGTGGAATCTCTGGTGTGTCTCTCGGCATTaGCTTGAATCCAAGTTCCTA | + |
Preference number: 4 (lower is better) Translates to: VSPVYLCCWGSVTGWNLWCVSRH*LESKFL Trigger: TAGGAACTTGGATTCAAGGCAATGCCGAGAGACACA...CCAGAGATTCCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGACGGGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 |
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CDS-3UTR CCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGTGGGGATCTCTGTaGATTCCCTCACTGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSLWGSL*IPSLLC Trigger: GCAGAGCAGTGAGGGAATCCACAGAGATCCCCACAG...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGCAGGGAGCCCTGCTGTaGTCCTGTCTCCTGACTCGA | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEQGALL*SCLLTR Trigger: TCGAGTCAGGAGACAGGACCACAGCAGGGCTCCCTG...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCAGGGGGAAGCACTTTCTaGACCAGTAACGGTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSGGSTF*TSNGCN Trigger: GTTGCAACCGTTACTGGTTCAGAAAGTGCTTCCCCC...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGGCTACTTCGAGGCAGTaGCTGTTCCTCATGCAAAGC | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMATSRQ*LFLMQS Trigger: GCTTTGCATGAGGAACAGCCACTGCCTCGAAGTAGC...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAAATGCACAGAGGCTGTaGAGCAGGAACATTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: WWASWVLSMCRYHLHCPENAQRL*SRNIEG Trigger: TCCCTCAATGTTCCTGCTCCACAGCCTCTGTGCATT...TTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAGAACACCTTCCCGTCTaGTCTTTAAGGAGTTTCCTG | + |
Preference number: 4 (lower is better) Translates to: WWASWVLSMCRYHLHCPEEHLPV*SLRSFL Trigger: CAGGAAACTCCTTAAAGATCAGACGGGAAGGTGTTC...TTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAACAGATGGAAATTCACTaGTTTCTAGGTCATCCGGCG | + |
Preference number: 4 (lower is better) Translates to: WWASWVLSMCRYHLHCPEQMEIH*FLGHPA Trigger: CGCCGGATGACCTAGAAATCAGTGAATTTCCATCTG...TTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGGTCTGTACCACTAGTTaGGCTGGTCTGTGTGTTGCT | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMVCTTS*AGLCVA Trigger: AGCAACACACAGACCAGCTCAACTAGTGGTACAGAC...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCGATGGGGAGGGGGTCTaGGACCTGGATCCCAGAGCT | + |
Preference number: 4 (lower is better) Translates to: ETAYLLQEILLEVGCIPTDGEGV*DLDPRA Trigger: AGCTCTGGGATCCAGGTCGCAGACCCCCTCCCCATC...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCATTTCGTCCCTCACACTaGAAGGCACTGAAGGAATCC | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSFRPSH*KALKES Trigger: GGATTCCTTCAGTGCCTTCCAGTGTGAGGGACGAAA...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGTTTCGTCCCTCACACTaGAAGGCACTGAAGGAATCC | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMFRPSH*KALKES Trigger: GGATTCCTTCAGTGCCTTCCAGTGTGAGGGACGAAA...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCATCTGTTCTGCCTCTGTaGGGAAACATTTGCCTTCGG | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSSVLPL*GNICLR Trigger: CCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGA...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGCATTCCTTCTTTCTGTaGTGTGGCTGTGGGGATCTC | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQHSFFL*CGCGDL Trigger: GAGATCCCCACAGCCACATCACAGAAAGAAGGAATG...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGAAGTGCTACACATCGTaGAGGACCAGAGGGCTCATC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEKCYTS*RTRGLI Trigger: GATGAGCCCTCTGGTCCTGCACGATGTGTAGCACTT...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAGTGCTACACATCGTaGAGGACCAGAGGGCTCATC | + |
Preference number: 4 (lower is better) Translates to: SDKRTGRSMSVMANTRGLKCYTS*RTRGLI Trigger: GATGAGCCCTCTGGTCCTGCACGATGTGTAGCACTT...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCAAAGTGCTACACATCGTaGAGGACCAGAGGGCTCATC | + |
Preference number: 4 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSKCYTS*RTRGLI Trigger: GATGAGCCCTCTGGTCCTGCACGATGTGTAGCACTT...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCAGTCAACGACAGGAACTaGACCTTTGGCTCGCTCAAC | + |
Preference number: 4 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSVNDRN*TFGSLN Trigger: GTTGAGCGAGCCAAAGGTGCAGTTCCTGTCGTTGAC...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGGCTACTTCGAGGCAGTaGCTGTTCCTCATGCAAAGC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEATSRQ*LFLMQS Trigger: GCTTTGCATGAGGAACAGCCACTGCCTCGAAGTAGC...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTGTCTACCTGTGCTGCTaGGGCAGCGTCACTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCVYLCC*GSVTGW Trigger: CCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGAC...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGTCTGTGATGTGGCTGTaGGGATCTCTGTGGATTCCC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKESVMWL*GSLWIP Trigger: GGGAATCCACAGAGATCCCCACAGCCACATCACAGA...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGCACACTGGAAGGCACTaGAGGAATCCGAGTGACTAT | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEHTGRH*RNPSDY Trigger: ATAGTCACTCGGATTCCTTCAGTGCCTTCCAGTGTG...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGGTGCTTCTGTTCTTCTaGAGGCCTCCCATGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGVLLFF*RPPMKP Trigger: TGGCTTCATGGGAGGCCTTCAGAAGAACAGAAGCAC...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGAGTGGATCTAGTTATTaGCGAAGCCTCTGTGGAACT | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMSGSSY*RSLCGT Trigger: AGTTCCACAGAGGCTTCGTCAATAACTAGATCCACT...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGTACTATGAGTATCAGTaGGGTGGCTCTCAGTGGATC | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQYYEYQ*GGSQWI Trigger: GATCCACTGAGAGCCACCTCACTGATACTCATAGTA...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGAAGTGCTACACATCGTaGAGGACCAGAGGGCTCATC | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGKCYTS*RTRGLI Trigger: GATGAGCCCTCTGGTCCTGCACGATGTGTAGCACTT...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGAGTGGTCAGTCCAGTaGTTCTGTTCTTCTGAAGGC | + |
Preference number: 4 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPEWSVQ*FCSSEG Trigger: GCCTTCAGAAGAACAGAAGCACTGGACTGACCACTC...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGAGCTGGTCTGTGTGTTaGTGGTGGTGCTACTGCTAT | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPSWSVC*WWCYCY Trigger: ATAGCAGTAGCACCACCAGCAACACACAGACCAGCT...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGCTGTGGGGAAACATTTaGCTTCGGCTTCGAAAGAGC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKELWGNI*LRLRKS Trigger: GCTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAG...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGTCTATTGCACTGTCATaGTCTGCAACAGTTTCGCTG | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMSIALS*SATVSL Trigger: CAGCGAAACTGTTGCAGACCATGACAGTGCAATAGA...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGATTTCAAGGCTGCCTaGACTACTCCCCCTTCTTGT | + |
Preference number: 4 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPDFKAA*TTPPSC Trigger: ACAAGAAGGGGGAGTAGTCCAGGCAGCCTTGAAATC...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGGATTTCAAGGCTGCCTaGACTACTCCCCCTTCTTGT | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEDFKAA*TTPPSC Trigger: ACAAGAAGGGGGAGTAGTCCAGGCAGCCTTGAAATC...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTAATGCACAGAGGCTGTaGAGCAGGAACATTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPNAQRL*SRNIEG Trigger: TCCCTCAATGTTCCTGCTCCACAGCCTCTGTGCATT...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCAGTGGAGCCTCGGGTaGCATTCTGTTCTGCCTCTG | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNQWSLG*HSVLPL Trigger: CAGAGGCAGAACAGAATGCCACCCGAGGCTCCACTG...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGCTAGCAGCTGCTCTCTaGATATTCTTTGGCAAGACT | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQLAAAL*IFFGKT Trigger: AGTCTTGCCAAAGAATATTCAGAGAGCAGCTGCTAG...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGGTATATCTGAACAAGTaGTCGCAGTGTCCTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPVYLNK*SQCPQA Trigger: AGCCTGAGGACACTGCGATCACTTGTTCAGATATAC...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGGCAACAATGAGAGTCTaGAAAAGTGGTCCTGCAAGT | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQATMRV*KSGPAS Trigger: ACTTGCAGGACCACTTTTTCAGACTCTCATTGTTGC...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCAGCAGTAATAAAAAGCTaGCTGAGGTTTCTGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSAVIKS*LRFLRC Trigger: ACACCTCAGAAACCTCAGTCAGCTTTTTATTACTGC...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGCTAGTGTTTGAAACATaGGGCATTCTGCGGCTTACC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKELVFET*GILRLT Trigger: GGTAAGCCGCAGAATGCCTCATGTTTCAAACACTAG...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGGGTCTTATCATTTTCTaGTCCTGTAGCATGGACTGG | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQGLIIF*SCSMDW Trigger: CCAGTCCATGCTACAGGAGCAGAAAATGATAAGACC...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGGAGTGGTCAGTCCAGTaGTTCTGTTCTTCTGAAGGC | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGEWSVQ*FCSSEG Trigger: GCCTTCAGAAGAACAGAAGCACTGGACTGACCACTC...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTTTCGTCCCTCACACTaGAAGGCACTGAAGGAATCC | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGFRPSH*KALKES Trigger: GGATTCCTTCAGTGCCTTCCAGTGTGAGGGACGAAA...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTTGACGAAGCCTCTGTaGAACTCTGCAAGCTTGGAG | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGLTKPL*NSASLE Trigger: CTCCAAGCTTGCAGAGTTCCACAGAGGCTTCGTCAA...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCGTACAGATCCCTCAGTaGAGCCTCGGGTGGCATTCT | + |
Preference number: 4 (lower is better) Translates to: QNKVVWKLNGNQRSVVGFVQIPQ*SLGWHS Trigger: AGAATGCCACCCGAGGCTCCACTGAGGGATCTGTAC...GAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACTAGCAGCTGCTCTCTaGATATTCTTTGGCAAGACT | + |
Preference number: 4 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSLAAAL*IFFGKT Trigger: AGTCTTGCCAAAGAATATTCAGAGAGCAGCTGCTAG...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGCTAGCAGCTGCTCTCTaGATATTCTTTGGCAAGACT | + |
Preference number: 4 (lower is better) Translates to: SDKRTGRSMSVMANTRGLLAAAL*IFFGKT Trigger: AGTCTTGCCAAAGAATATTCAGAGAGCAGCTGCTAG...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCAGCAACAATGAGAGTCTaGAAAAGTGGTCCTGCAAGT | + |
Preference number: 4 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSATMRV*KSGPAS Trigger: ACTTGCAGGACCACTTTTTCAGACTCTCATTGTTGC...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCGGGGGAAGCACTTTCTaGACCAGTAACGGTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: QNKVVWKLNGNQRSVVGFGGSTF*TSNGCN Trigger: GTTGCAACCGTTACTGGTTCAGAAAGTGCTTCCCCC...GAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACGGGGGAAGCACTTTCTaGACCAGTAACGGTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNGGSTF*TSNGCN Trigger: GTTGCAACCGTTACTGGTTCAGAAAGTGCTTCCCCC...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGGTCATCCGGCGTCTaGAGAACAGAGTGGTGGAGC | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRRSSGV*RTEWWS Trigger: GCTCCACCACTCTGTTCTTCAGACGCCGGATGACCT...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGGTTGCTATTAGGATCTaGATAATTTTCAGGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMVAIRI*IIFRGD Trigger: GTCTCCCCTGAAAATTATTCAGATCCTAATAGCAAC...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGGCAGTAATAAAAAGCTaGCTGAGGTTTCTGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQAVIKS*LRFLRC Trigger: ACACCTCAGAAACCTCAGTCAGCTTTTTATTACTGC...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCGTGCTTCTGTTCTTCTaGAGGCCTCCCATGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: ETAYLLQEILLEVGCIPTVLLFF*RPPMKP Trigger: TGGCTTCATGGGAGGCCTTCAGAAGAACAGAAGCAC...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGACTTGTGAAGACAGCTaGGCTTGGTTCTTTTTGAAA | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMTCEDS*AWFFLK Trigger: TTTCAAAAAGAACCAAGCTCAGCTGTCTTCACAAGT...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGGTGTCCTCAGGCTCTTaGATAAACAAAGGCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: SDKRTGRSMSVMANTRGLVSSGS*INKGFS Trigger: GGAAAAGCCTTTGTTTATGCAAGAGCCTGAGGACAC...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGCTCTCCATCTTCTATTaGACTGTCATGGTCTGCAAC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKELSIFY*TVMVCN Trigger: GTTGCAGACCATGACAGTGCAATAGAAGATGGAGAG...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATAGATGGGGAGGGGGTCTaGGACCTGGATCCCAGAGCT | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEIDGEGV*DLDPRA Trigger: AGCTCTGGGATCCAGGTCGCAGACCCCCTCCCCATC...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGAAACATGAGGCATTCTaGGGCTTACCGGTGTTTTTA | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQKHEAF*GLPVFL Trigger: TAAAAACACCGGTAAGCCGCAGAATGCCTCATGTTT...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGTCTATTGCACTGTCATaGTCTGCAACAGTTTCGCTG | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKESIALS*SATVSL Trigger: CAGCGAAACTGTTGCAGACCATGACAGTGCAATAGA...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAGAATATTCTGTTCTGTaGCTTCTTCACAGACATGAA | + |
Preference number: 4 (lower is better) Translates to: WWASWVLSMCRYHLHCPEEYSVL*LLHRHE Trigger: TTCATGTCTGTGAAGAAGCCACAGAACAGAATATTC...TTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACGCTACTTCGAGGCAGTaGCTGTTCCTCATGCAAAGC | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNATSRQ*LFLMQS Trigger: GCTTTGCATGAGGAACAGCCACTGCCTCGAAGTAGC...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGGATTTCAAGGCTGCCTaGACTACTCCCCCTTCTTGT | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVDFKAA*TTPPSC Trigger: ACAAGAAGGGGGAGTAGTCCAGGCAGCCTTGAAATC...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGGAACACCTTCCCGTCTaGTCTTTAAGGAGTTTCCTG | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVEHLPV*SLRSFL Trigger: CAGGAAACTCCTTAAAGATCAGACGGGAAGGTGTTC...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGAATGAGGCTTTGGTCTaGTCTGTGGGATATCAAGTA | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPNEALV*SVGYQV Trigger: TACTTGATATCCCACAGATCAGACCAAAGCCTCATT...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGGGTAATAAAAATGCCTaGCGAAATATCTCTGTGACA | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMGNKNA*RNISVT Trigger: TGTCACAGAGATATTTCGTCAGGCATTTTTATTACC...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGGTATATCTGAACAAGTaGTCGCAGTGTCCTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVVYLNK*SQCPQA Trigger: AGCCTGAGGACACTGCGATCACTTGTTCAGATATAC...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTAGGTCATCCGGCGTCTaGAGAACAGAGTGGTGGAGC | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSRSSGV*RTEWWS Trigger: GCTCCACCACTCTGTTCTTCAGACGCCGGATGACCT...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCAGATGGAAATTCACTaGTTTCTAGGTCATCCGGCG | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVQMEIH*FLGHPA Trigger: CGCCGGATGACCTAGAAATCAGTGAATTTCCATCTG...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCAGTAATAAAAAGCTaGCTGAGGTTTCTGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPAVIKS*LRFLRC Trigger: ACACCTCAGAAACCTCAGTCAGCTTTTTATTACTGC...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGTTTTTCTTCAAGAGATaGAAGCTCCTCCGTTTGTCC | + |
Preference number: 4 (lower is better) Translates to: SDKRTGRSMSVMANTRGLFFFKR*KLLRLS Trigger: GGACAAACGGAGGAGCTTTCATCTCTTGAAGAAAAA...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGATCAGTCAACATGGTTaGCTTAAAAAGCCAAGGTGT | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQISQHG*LKKPRC Trigger: ACACCTTGGCTTTTTAAGGCAACCATGTTGACTGAT...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGTGCTTCCACTCTTGGTaGATTAAGAAAAGCCGAAGA | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPCFHSW*IKKSRR Trigger: TCTTCGGCTTTTCTTAATGCACCAAGAGTGGAAGCA...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTGTGTCTCTCGGCATTaGCTTGAATCCAAGTTCCTA | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGCVSRH*LESKFL Trigger: TAGGAACTTGGATTCAAGGCAATGCCGAGAGACACA...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGATCCAAAGCTGCATCTaGAAGTTCTACTGGACCTAT | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEIQSCI*KFYWTY Trigger: ATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGAT...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTCTATTGCACTGTCATaGTCTGCAACAGTTTCGCTG | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGSIALS*SATVSL Trigger: CAGCGAAACTGTTGCAGACCATGACAGTGCAATAGA...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCAATCAGAAAGGCTTATTaGAAAGTACTTGGGATTGCT | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSIRKAY*KVLGIA Trigger: AGCAATCCCAAGTACTTTCCAATAAGCCTTTCTGAT...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGCTAAATCTTCTAAGCTaGAGAGAAAGCCCATCTTTT | + |
Preference number: 4 (lower is better) Translates to: WASWVLSMCRYHLHCPEMLNLLS*RESPSF Trigger: AAAAGATGGGCTTTCTCTCCAGCTTAGAAGATTTAG...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCGAACACCTTCCCGTCTaGTCTTTAAGGAGTTTCCTG | + |
Preference number: 4 (lower is better) Translates to: ETAYLLQEILLEVGCIPTEHLPV*SLRSFL Trigger: CAGGAAACTCCTTAAAGATCAGACGGGAAGGTGTTC...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGATTGCTTCTCTTAGATaGAAACACTCTGCGAACAAT | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQIASLR*KHSANN Trigger: ATTGTTCGCAGAGTGTTTTCATCTAAGAGAAGCAAT...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACGTATATCTGAACAAGTaGTCGCAGTGTCCTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNVYLNK*SQCPQA Trigger: AGCCTGAGGACACTGCGATCACTTGTTCAGATATAC...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTCACACTGGAAGGCACTaGAGGAATCCGAGTGACTAT | + |
Preference number: 4 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCHTGRH*RNPSDY Trigger: ATAGTCACTCGGATTCCTTCAGTGCCTTCCAGTGTG...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAGGGGGAAGCACTTTCTaGACCAGTAACGGTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVGGSTF*TSNGCN Trigger: GTTGCAACCGTTACTGGTTCAGAAAGTGCTTCCCCC...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACGAAGACTCTCTACTATaGGTATCAGTGAGGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNEDSLL*VSVRWL Trigger: GAGCCACCTCACTGATACTCATAGTAGAGAGTCTTC...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGAAGCTTGCTAGTGTTTaGAACATGAGGCATTCTGCG | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVKLASV*NMRHSA Trigger: CGCAGAATGCCTCATGTTTCAAACACTAGCAAGCTT...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGATGATTTTGGCCCTATaGGTTACTGTTTCAGACAAG | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEMILAL*VTVSDK Trigger: CTTGTCTGAAACAGTAACTCATAGGGCCAAAATCAT...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGATCAGTCAACATGGTTaGCTTAAAAAGCCAAGGTGT | + |
Preference number: 4 (lower is better) Translates to: SDKRTGRSMSVMANTRGLISQHG*LKKPRC Trigger: ACACCTTGGCTTTTTAAGGCAACCATGTTGACTGAT...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTGAGTGGTCAGTCCAGTaGTTCTGTTCTTCTGAAGGC | + |
Preference number: 4 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCEWSVQ*FCSSEG Trigger: GCCTTCAGAAGAACAGAAGCACTGGACTGACCACTC...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGGATTTGATCCAAAGCTaGATCTGCAAGTTCTACTGG | + |
Preference number: 4 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGDLIQS*ICKFYW Trigger: CCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATC...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGGAATATTCTGTTCTGTaGCTTCTTCACAGACATGAA | + |
Preference number: 4 (lower is better) Translates to: LKELTLLLIRAATAAHCQEYSVL*LLHRHE Trigger: TTCATGTCTGTGAAGAAGCCACAGAACAGAATATTC...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGTCAGGTCAGGAACATTaGCGCTGTTGCCACCAGTCT | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRSGQEH*RCCHQS Trigger: AGACTGGTGGCAACAGCGCCAATGTTCCTGACCTGA...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCATGGTTCTTTTTGAAATaGTGTATTTTCAGAAGTCCC | + |
Preference number: 4 (lower is better) Translates to: ARPERVNTTADQGGYCCSWFFLK*CIFRSP Trigger: GGGACTTCTGAAAATACACCATTTCAAAAAGAACCA...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGGACAGACTCGGTAGATaGTCTAAAAGTAACATGAAC | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEDRLGR*SKSNMN Trigger: GTTCATGTTACTTTTAGACCATCTACCGAGTCTGTC...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACTGGTCTGTGTGTTGCTaGTGGTGCTACTGCTATTAC | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNWSVCC*WCYCYY Trigger: GTAATAGCAGTAGCACCACCAGCAACACACAGACCA...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCCTAGCAGCTGCTCTCTaGATATTCTTTGGCAAGACT | + |
Preference number: 4 (lower is better) Translates to: ETAYLLQEILLEVGCIPTLAAAL*IFFGKT Trigger: AGTCTTGCCAAAGAATATTCAGAGAGCAGCTGCTAG...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGATTGCTTCTCTTAGATaGAAACACTCTGCGAACAAT | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPIASLR*KHSANN Trigger: ATTGTTCGCAGAGTGTTTTCATCTAAGAGAAGCAAT...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACGCAACAATGAGAGTCTaGAAAAGTGGTCCTGCAAGT | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNATMRV*KSGPAS Trigger: ACTTGCAGGACCACTTTTTCAGACTCTCATTGTTGC...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGAGGTCATCCGGCGTCTaGAGAACAGAGTGGTGGAGC | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVRSSGV*RTEWWS Trigger: GCTCCACCACTCTGTTCTTCAGACGCCGGATGACCT...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
||
CDS-3UTR TCA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTGTGCTTCTGTTCTTCTaGAGGCCTCCCATGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSVLLFF*RPPMKP Trigger: TGGCTTCATGGGAGGCCTTCAGAAGAACAGAAGCAC...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTTGGAGCATGACGGGATaGACTGTCAACGACAGGAAC | + |
Preference number: 4 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSWSMTG*TVNDRN Trigger: GTTCCTGTCGTTGACAGTTCATCCCGTCATGCTCCA...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTTGCAAGCTTGGAGCATaGCGGGATGAACTGTCAACG | + |
Preference number: 4 (lower is better) Translates to: MLPHVSNFSWNLSCCTAICKLGA*RDELST Trigger: CGTTGACAGTTCATCCCGTCATGCTCCAAGCTTGCA...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACGTGTCCTCAGGCTCTTaGATAAACAAAGGCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNVSSGS*INKGFS Trigger: GGAAAAGCCTTTGTTTATGCAAGAGCCTGAGGACAC...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACGGTCTTATCATTTTCTaGTCCTGTAGCATGGACTGG | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNGLIIF*SCSMDW Trigger: CCAGTCCATGCTACAGGAGCAGAAAATGATAAGACC...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACTGTGTCTCTCGGCATTaGCTTGAATCCAAGTTCCTA | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNCVSRH*LESKFL Trigger: TAGGAACTTGGATTCAAGGCAATGCCGAGAGACACA...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGGAGTGGTCAGTCCAGTaGTTCTGTTCTTCTGAAGGC | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIREWSVQ*FCSSEG Trigger: GCCTTCAGAAGAACAGAAGCACTGGACTGACCACTC...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
||
CDS-3UTR GCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGAAAGATGGTCATATATaGTATCACCAACTTCCAGAG | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEKDGHI*YHQLPE Trigger: CTCTGGAAGTTGGTGATAGCATATATGACCATCTTT...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGCTACTTCGAGGCAGTaGCTGTTCCTCATGCAAAGC | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSATSRQ*LFLMQS Trigger: GCTTTGCATGAGGAACAGCCACTGCCTCGAAGTAGC...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTTCAGGTCAGGAACATTaGCGCTGTTGCCACCAGTCT | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSSGQEH*RCCHQS Trigger: AGACTGGTGGCAACAGCGCCAATGTTCCTGACCTGA...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGATCAGAAAGGCTTATTaGAAAGTACTTGGGATTGCT | + |
Preference number: 4 (lower is better) Translates to: KRTGRSMSVMANTRGLKEIRKAY*KVLGIA Trigger: AGCAATCCCAAGTACTTTCCAATAAGCCTTTCTGAT...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGATCAGAAAGGCTTATTaGAAAGTACTTGGGATTGCT | + |
Preference number: 4 (lower is better) Translates to: LNGNQRSVVGFLGTEYVPIRKAY*KVLGIA Trigger: AGCAATCCCAAGTACTTTCCAATAAGCCTTTCTGAT...CGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAATGCACAGAGGCTGTaGAGCAGGAACATTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVNAQRL*SRNIEG Trigger: TCCCTCAATGTTCCTGCTCCACAGCCTCTGTGCATT...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAATGCACAGAGGCTGTaGAGCAGGAACATTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRNAQRL*SRNIEG Trigger: TCCCTCAATGTTCCTGCTCCACAGCCTCTGTGCATT...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAGAACACCTTCCCGTCTaGTCTTTAAGGAGTTTCCTG | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVEHLPV*SLRSFL Trigger: CAGGAAACTCCTTAAAGATCAGACGGGAAGGTGTTC...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGGTTGCTATTAGGATCTaGATAATTTTCAGGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVVAIRI*IIFRGD Trigger: GTCTCCCCTGAAAATTATTCAGATCCTAATAGCAAC...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGTTCTTGAAGGCTGAGTaGAGGATTAATAAGATTATC | + |
Preference number: 4 (lower is better) Translates to: SDKRTGRSMSVMANTRGLFLKAE*RINKII Trigger: GATAATCTTATTAATCCTCCACTCAGCCTTCAAGAA...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTGATTTCAAGGCTGCCTaGACTACTCCCCCTTCTTGT | + |
Preference number: 4 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSDFKAA*TTPPSC Trigger: ACAAGAAGGGGGAGTAGTCCAGGCAGCCTTGAAATC...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACTTGTGCTTCCACTCTTaGTGCATTAAGAAAAGCCGA | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNLCFHS*CIKKSR Trigger: TCGGCTTTTCTTAATGCACCAAGAGTGGAAGCACAA...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACCAAGCTCCTCTTAGTTaGAGAAAGCTTGCTAGTGTT | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNQAPLS*RKLASV Trigger: AACACTAGCAAGCTTTCTCCAACTAAGAGGAGCTTG...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGGGTAATAAAAATGCCTaGCGAAATATCTCTGTGACA | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVGNKNA*RNISVT Trigger: TGTCACAGAGATATTTCGTCAGGCATTTTTATTACC...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATACACACTGGAAGGCACTaGAGGAATCCGAGTGACTAT | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEIHTGRH*RNPSDY Trigger: ATAGTCACTCGGATTCCTTCAGTGCCTTCCAGTGTG...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACGTTGCTATTAGGATCTaGATAATTTTCAGGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNVAIRI*IIFRGD Trigger: GTCTCCCCTGAAAATTATTCAGATCCTAATAGCAAC...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTTTTTTCTTCAAGAGATaGAAGCTCCTCCGTTTGTCC | + |
Preference number: 4 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCFFFKR*KLLRLS Trigger: GGACAAACGGAGGAGCTTTCATCTCTTGAAGAAAAA...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGGTGCTTCTGTTCTTCTaGAGGCCTCCCATGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVVLLFF*RPPMKP Trigger: TGGCTTCATGGGAGGCCTTCAGAAGAACAGAAGCAC...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | GAGCCAGTGGCTATGGTAAGATATGGATCATGTACTTTGATGAAGATTACTGGATGCATTTTGGGTTTGTaGCGAGTGACCAGCACTTTC | + |
Preference number: 4 (lower is better) Translates to: EPVAMVRYGSCTLMKITGCILGL*RVTSTF Trigger: GAAAGTGCTGGTCACTCGTCACAAACCCAAAATGCA...TCCAGTAATCTTCATCAAAGTACATGATCCATATCTTACCATAGCCACTGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219323.2 |
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CDS-3UTR TCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACTCTGGTTTTACTTCCTaGCCTGTGTACTCTACTTTA | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNSGFTS*PVYSTL Trigger: TAAAGTAGAGTACACAGGTCAGGAAGTAAAACCAGA...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATAAGTACTGCGACTACCTaGCTGGTTACTTGCCATTCC | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEISTATT*LVTCHS Trigger: GGAATGGCAAGTAACCAGGCAGGTAGTCGCAGTACT...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTATCTATTGCACTGTCATaGTCTGCAACAGTTTCGCTG | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVSIALS*SATVSL Trigger: CAGCGAAACTGTTGCAGACCATGACAGTGCAATAGA...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGTCAGGTCAGGAACATTaGCGCTGTTGCCACCAGTCT | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVSGQEH*RCCHQS Trigger: AGACTGGTGGCAACAGCGCCAATGTTCCTGACCTGA...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACTCTTCCGGTTTCTCTTaGTCAGACATTGAAAGTATG | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNSSGFS*SDIESM Trigger: CATACTTTCAATGTCTGACCAAGAGAAACCGGAAGA...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCTAAATCTTCTAAGCTaGAGAGAAAGCCCATCTTTT | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVLNLLS*RESPSF Trigger: AAAAGATGGGCTTTCTCTCCAGCTTAGAAGATTTAG...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGCAACAATGAGAGTCTaGAAAAGTGGTCCTGCAAGT | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSATMRV*KSGPAS Trigger: ACTTGCAGGACCACTTTTTCAGACTCTCATTGTTGC...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGCACACTGGAAGGCACTaGAGGAATCCGAGTGACTAT | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVHTGRH*RNPSDY Trigger: ATAGTCACTCGGATTCCTTCAGTGCCTTCCAGTGTG...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATACAGATGGAAATTCACTaGTTTCTAGGTCATCCGGCG | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEIQMEIH*FLGHPA Trigger: CGCCGGATGACCTAGAAATCAGTGAATTTCCATCTG...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGTCAATGTACTGGATTTaGTCCAAAGCTGCATCTGCA | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRSMYWI*SKAASA Trigger: TGCAGATGCAGCTTTGGATCAAATCCAGTACATTGA...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGTGTCCTCAGGCTCTTaGATAAACAAAGGCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSVSSGS*INKGFS Trigger: GGAAAAGCCTTTGTTTATGCAAGAGCCTGAGGACAC...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTCTTATCATTTTCTaGTCCTGTAGCATGGACTGG | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSGLIIF*SCSMDW Trigger: CCAGTCCATGCTACAGGAGCAGAAAATGATAAGACC...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATAGGTGGCATTCTGTTCTaGCTCTGTGGGGAAACATTT | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEIGGILF*LCGETF Trigger: AAATGTTTCCCCACAGAGGCAGAACAGAATGCCACC...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGTTCTTGAAGGCTGAGTaGAGGATTAATAAGATTATC | + |
Preference number: 4 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVFLKAE*RINKII Trigger: GATAATCTTATTAATCCTCCACTCAGCCTTCAAGAA...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACGAATATTCTGTTCTGTaGCTTCTTCACAGACATGAA | + |
Preference number: 4 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNEYSVL*LLHRHE Trigger: TTCATGTCTGTGAAGAAGCCACAGAACAGAATATTC...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACGAATATTCTGTTCTGTaGCTTCTTCACAGACATGAA | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNEYSVL*LLHRHE Trigger: TTCATGTCTGTGAAGAAGCCACAGAACAGAATATTC...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGTTTCGTCCCTCACACTaGAAGGCACTGAAGGAATCC | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVFRPSH*KALKES Trigger: GGATTCCTTCAGTGCCTTCCAGTGTGAGGGACGAAA...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTTCTTCCGGTTTCTCTTaGTCAGACATTGAAAGTATG | + |
Preference number: 4 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCSSGFS*SDIESM Trigger: CATACTTTCAATGTCTGACCAAGAGAAACCGGAAGA...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACCTAAATCTTCTAAGCTaGAGAGAAAGCCCATCTTTT | + |
Preference number: 4 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNLNLLS*RESPSF Trigger: AAAAGATGGGCTTTCTCTCCAGCTTAGAAGATTTAG...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCACTGGACCTATCAAATaGCAAAGATGGTCATATATG | + |
Preference number: 4 (lower is better) Translates to: ETAYLLQEILLEVGCIPTTGPIK*QRWSYM Trigger: CATATATGACCATCTTTGCCATTTGATAGGTCCAGT...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGCAGATGGAAATTCACTaGTTTCTAGGTCATCCGGCG | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVQMEIH*FLGHPA Trigger: CGCCGGATGACCTAGAAATCAGTGAATTTCCATCTG...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTGCAGTAATAAAAAGCTaGCTGAGGTTTCTGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: MLPHVSNFSWNLSCCTAIAVIKS*LRFLRC Trigger: ACACCTCAGAAACCTCAGTCAGCTTTTTATTACTGC...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTTGCTTCCACTCTTGGTaGATTAAGAAAAGCCGAAGA | + |
Preference number: 4 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSCFHSW*IKKSRR Trigger: TCTTCGGCTTTTCTTAATGCACCAAGAGTGGAAGCA...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTTGCTTCCACTCTTGGTaGATTAAGAAAAGCCGAAGA | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSCFHSW*IKKSRR Trigger: TCTTCGGCTTTTCTTAATGCACCAAGAGTGGAAGCA...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATATGTGTCTCTCGGCATTaGCTTGAATCCAAGTTCCTA | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEICVSRH*LESKFL Trigger: TAGGAACTTGGATTCAAGGCAATGCCGAGAGACACA...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCTTCTTGAAGGCTGAGTaGAGGATTAATAAGATTATC | + |
Preference number: 4 (lower is better) Translates to: QNKVVWKLNGNQRSVVGFFLKAE*RINKII Trigger: GATAATCTTATTAATCCTCCACTCAGCCTTCAAGAA...GAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTTTGTGCTTCCACTCTTaGTGCATTAAGAAAAGCCGA | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSLCFHS*CIKKSR Trigger: TCGGCTTTTCTTAATGCACCAAGAGTGGAAGCACAA...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAATCTGCAAGTTCTACTaGACCTATCAAATGGCAAAG | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVICKFY*TYQMAK Trigger: CTTTGCCATTTGATAGGTCCAGTAGAACTTGCAGAT...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTTCAATAAGCACTTCCTaGGAAGCTGTATCTTTCCCT | + |
Preference number: 4 (lower is better) Translates to: MLPHVSNFSWNLSCCTAISISTS*EAVSFP Trigger: AGGGAAAGATACAGCTTCCCAGGAAGTGCTTATTGA...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGCATCTACTTCTGTaGCTGTTTGTCTACACAGAT | + |
Preference number: 4 (lower is better) Translates to: MLPHVSNFSWNLSCCTAIRHLLL*LFVYTD Trigger: ATCTGTGTAGACAAACAGCCACAGAAGTAGATGCCT...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGGGTAATAAAAATGCCTaGCGAAATATCTCTGTGACA | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRGNKNA*RNISVT Trigger: TGTCACAGAGATATTTCGTCAGGCATTTTTATTACC...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTATCAGTCAACATGGTTaGCTTAAAAAGCCAAGGTGT | + |
Preference number: 4 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSISQHG*LKKPRC Trigger: ACACCTTGGCTTTTTAAGGCAACCATGTTGACTGAT...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CATGAAAATCAAGAGCCAGTGGCTATGGTAAGATATGGATCATGTACTTTGATGTCTTTTACTCTTACCTaGGTCAGCAGGGAAATGATG | + |
Preference number: 4 (lower is better) Translates to: HENQEPVAMVRYGSCTLMSFTLT*VSREMM Trigger: CATCATTTCCCTGCTGACGCAGGTAAGAGTAAAAGA...CATCAAAGTACATGATCCATATCTTACCATAGCCACTGGCTCTTGATTTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219323.2 |
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CDS-3UTR CCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATACACATAATGAGGCTTTaGTCTGATCTGTGGGATATC | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEIHIMRL*SDLWDI Trigger: GATATCCCACAGATCAGACCAAAGCCTCATTATGTG...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGATCAGAAAGGCTTATTaGAAAGTACTTGGGATTGCT | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRIRKAY*KVLGIA Trigger: AGCAATCCCAAGTACTTTCCAATAAGCCTTTCTGAT...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGACATGAGATTTTCTaGTTTTACTTCCTGACCTGT | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVRHEIF*FYFLTC Trigger: ACAGGTCAGGAAGTAAAACCAGAAAATCTCATGTCT...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTATTGCTTCTCTTAGATaGAAACACTCTGCGAACAAT | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSIASLR*KHSANN Trigger: ATTGTTCGCAGAGTGTTTTCATCTAAGAGAAGCAAT...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR TCA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGTTTTTCTTCAAGAGATaGAAGCTCCTCCGTTTGTCC | + |
Preference number: 4 (lower is better) Translates to: TDVQLCSSSLNASINLNVFFFKR*KLLRLS Trigger: GGACAAACGGAGGAGCTTTCATCTCTTGAAGAAAAA...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATAATCAGTCAACATGGTTaGCTTAAAAAGCCAAGGTGT | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEIISQHG*LKKPRC Trigger: ACACCTTGGCTTTTTAAGGCAACCATGTTGACTGAT...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR GCA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTTCATCAAGACTTAGTTaGTTAGCCTTTTCAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSSSRLS*LAFSAV Trigger: AACTGCTGAAAAGGCTAAGCAACTAAGTCTTGATGA...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGTTCTTGAAGGCTGAGTaGAGGATTAATAAGATTATC | + |
Preference number: 4 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRFLKAE*RINKII Trigger: GATAATCTTATTAATCCTCCACTCAGCCTTCAAGAA...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CACACCGGGATAAACTGGTCAATAATAAAAGACCACAGCCTCAAAACAGAAATATCTTCCGGTTTCTCTTaGTCAGACATTGAAAGTATG | + |
Preference number: 4 (lower is better) Translates to: HTGINWSIIKDHSLKTEISSGFS*SDIESM Trigger: CATACTTTCAATGTCTGACCAAGAGAAACCGGAAGA...TATTTCTGTTTTGAGGCTGTGGTCTTTTATTATTGACCAGTTTATCCCGGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTCTAAATCTTCTAAGCTaGAGAGAAAGCCCATCTTTT | + |
Preference number: 4 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSLNLLS*RESPSF Trigger: AAAAGATGGGCTTTCTCTCCAGCTTAGAAGATTTAG...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CCA 90 bp | CTGCACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAGTGTACTCTACTTTATaGAAAGATGGTATTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: LHCPEMRYQLGKKMLPHVVYSTL*KDGISS Trigger: AGAGGAAATACCATCTTTCCATAAAGTAGAGTACAC...TACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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3UTR CAA 72 bp | GAGCCAGTGGCTATGGTAAGATATGGATCATGTACTTaGATGAAGATTACTGGATATTTAAGGAACCACATT | + |
Preference number: 4 (lower is better) Translates to: EPVAMVRYGSCT*MKITGYLRNHI Trigger: AATGTGGTTCCTTAAATATCCAGTAATCTTCATCAAAGTACATGATCCATATCTTACCATAGCCACTGGCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219323.2 |
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CDS CCA 90 bp | CCCGTCTACCTGTGCTGCTGGGGCAGCGTCACTGGGTGGAATCTCTaGGTAGGATCCTGCGTCAGCAGGGAAATGATGGTAGGGAGCTGG | + |
Preference number: 5 (lower is better) Translates to: PVYLCCWGSVTGWNL*VGSCVSREMMVGSW Trigger: CCAGCTCCCTACCATCATTTCCCTGCTGACGCAGGATCCTACCCAGAGATTCCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS CCA 90 bp | CAGATCCCTCAGTGGAGCCTCGGGTGGCATTCTGTTCTGCCTCTGTaGGGAAACATTTGCCTTCGGCTTCGAAAGAGCATGGACAACAGT | + |
Preference number: 5 (lower is better) Translates to: QIPQWSLGWHSVLPL*GNICLRLRKSMDNS Trigger: ACTGTTGTCCATGCTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCACTGAGGGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GTCAGCCCCGTCTACCTGTGCTGCTGGGGCAGCGTCACTGGGTGGAATCTCTGGAATCAGAAAGGCTTATaGGAAAGTACTTGGGATTGC | + |
Preference number: 5 (lower is better) Translates to: VSPVYLCCWGSVTGWNLWNQKGL*ESTWDC Trigger: GCAATCCCAAGTACTTTCCAATAAGCCTTTCTGATT...CCAGAGATTCCACCCAGTGACGCTGCCCCAGCAGCACAGGTAGACGGGGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 |
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CDS-3UTR CAA 90 bp | TGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAACAGGAACTGCACCTTaGGCTCGCTCAACAGTGAAT | + |
Preference number: 5 (lower is better) Translates to: WWASWVLSMCRYHLHCPETGTAP*ARSTVN Trigger: ATTCACTGTTGAGCGAGCCAAAGGTGCAGTTCCTGT...TTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 90 bp | CTAGTTATTGACGAAGCCTCTGTGGAACTCTGCAAGCTTGGAGCATaGCGGGATGAACTGTCAACGACAGGAACTGCACCTTTGGCTCGC | + |
Preference number: 5 (lower is better) Translates to: LVIDEASVELCKLGA*RDELSTTGTAPLAR Trigger: GCGAGCCAAAGGTGCAGTTCCTGTCGTTGACAGTTCATCCCGTCATGCTCCAAGCTTGCAGAGTTCCACAGAGGCTTCGTCAATAACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 90 bp | AGTACTGCGACTACCTGCCTGGTTACTTGCCATTCCTTCTTTCTGTaGTGTGGCTGTGGGGATCTCTGTGGATTCCCTCACTGCTCTGCT | + |
Preference number: 5 (lower is better) Translates to: STATTCLVTCHSFFL*CGCGDLCGFPHCSA Trigger: AGCAGAGCAGTGAGGGAATCCACAGAGATCCCCACAGCCACATCACAGAAAGAAGGAATGGCAAGTAACCAGGCAGGTAGTCGCAGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 90 bp | ATAGCCCATTACATGACTGTACAGATCCCTCAGTGGAGCCTCGGGTaGCATTCTGTTCTGCCTCTGTGGGGAAACATTTGCCTTCGGCTT | + |
Preference number: 5 (lower is better) Translates to: IAHYMTVQIPQWSLG*HSVLPLWGNICLRL Trigger: AAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCACTGAGGGATCTGTACAGTCATGTAATGGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCACTGCCAGTCTGTGGGGAAACATTaGCCTTCGGCTTCGAAAGAG | + |
Preference number: 5 (lower is better) Translates to: LKELTLLLIRAATAAHCQSVGKH*PSASKE Trigger: CTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAGA...CTGGCAGTGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS GCA 90 bp | TGGAGCCTCGGGTGGCATTCTGTTCTGCCTCTGTGGGGAAACATTTaGCTTCGGCTTCGAAAGAGCATGGACAACAGTTTTATAAACGCC | + |
Preference number: 5 (lower is better) Translates to: WSLGWHSVLPLWGNI*LRLRKSMDNSFINA Trigger: GGCGTTTATAAAACTGTTGTCCATGCTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCAGGAAAGTACTTGGGATaGCTAAAACTTTGCGCTCCA | + |
Preference number: 5 (lower is better) Translates to: ARPERVNTTADQGGYCCSGKYLG*LKLCAP Trigger: TGGAGCGCAAAGTTTTAGCAATCCCAAGTACTTTCC...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | TGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTGCACTGCCCAGAAATGGGAAAGTACTTGGGATaGCTAAAACTTTGCGCTCCA | + |
Preference number: 5 (lower is better) Translates to: WASWVLSMCRYHLHCPEMGKYLG*LKLCAP Trigger: TGGAGCGCAAAGTTTTAGCAATCCCAAGTACTTTCC...CATTTCTGGGCAGTGCAGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTCTGATGCTGCACCGATaGTATCTAGAGGTCTGTACA | + |
Preference number: 5 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPLMLHR*YLEVCT Trigger: TGTACAGACCTCTAGATACAATCGGTGCAGCATCAG...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 90 bp | TCTACTATGAGTATCAGTGAGGTGGCTCTCAGTGGATCTAGTTATTaGCGAAGCCTCTGTGGAACTCTGCAAGCTTGGAGCATGACGGGA | + |
Preference number: 5 (lower is better) Translates to: STMSISEVALSGSSY*RSLCGTLQAWSMTG Trigger: TCCCGTCATGCTCCAAGCTTGCAGAGTTCCACAGAGGCTTCGTCAATAACTAGATCCACTGAGAGCCACCTCACTGATACTCATAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 90 bp | ATGGATCAGAACAGGAGCACTTTTAGCACTGCGAATATAGGCCGATaGCAGAGCACATTCACCAATGGATCGGCTTCTCATGGCAACAGT | + |
Preference number: 5 (lower is better) Translates to: MDQNRSTFSTANIGR*QSTFTNGSASHGNS Trigger: ACTGTTGCCATGAGAAGCCGATCCATTGGTGAATGTGCTCTGCCATCGGCCTATATTCGCAGTGCTAAAAGTGCTCCTGTTCTGATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219432.2 |
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CDS-3UTR CAA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGGGAAAGTACTTGGGATaGCTAAAACTTTGCGCTCCA | + |
Preference number: 5 (lower is better) Translates to: SDKRTGRSMSVMANTRGLGKYLG*LKLCAP Trigger: TGGAGCGCAAAGTTTTAGCAATCCCAAGTACTTTCC...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GCGAGGCCTGAAAGAGTTAACACTACTGCTGATCAGGGCGGCTACTGCTGCTCAAATCAGAAAGGCTTATaGGAAAGTACTTGGGATTGC | + |
Preference number: 5 (lower is better) Translates to: ARPERVNTTADQGGYCCSNQKGL*ESTWDC Trigger: GCAATCCCAAGTACTTTCCAATAAGCCTTTCTGATT...TGAGCAGCAGTAGCCGCCCTGATCAGCAGTAGTGTTAACTCTTTCAGGCCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGGTCAATGTACTGGATTaGATCCAAAGCTGCATCTGC | + |
Preference number: 5 (lower is better) Translates to: KRTGRSMSVMANTRGLKEVNVLD*IQSCIC Trigger: GCAGATGCAGCTTTGGATCAAATCCAGTACATTGAC...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGTCAGGCTCTGCAGACTaGTCTACTTTATCAACAGTA | + |
Preference number: 5 (lower is better) Translates to: KRTGRSMSVMANTRGLKESGSAD*STLSTV Trigger: TACTGTTGATAAAGTAGACAAGTCTGCAGAGCCTGA...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTCTCTCCATCTTCTATaGCACTGTCATGGTCTGCAA | + |
Preference number: 5 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGSLHLL*HCHGLQ Trigger: TTGCAGACCATGACAGTGCAATAGAAGATGGAGAGA...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTAGGTTATCTCTGATCTaGGCTAGATTCTGCCAAAGT | + |
Preference number: 5 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPRLSLI*ARFCQS Trigger: ACTTTGGCAGAATCTAGCCAAGATCAGAGATAACCT...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGAAAGAGTTCCTCTATAGTTACTaGAGTTTCTTGAAGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: KRTGRSMSVMANTRGLKEFLYSY*SFLKAE Trigger: CTCAGCCTTCAAGAAACTCAAGTAACTATAGAGGAA...CTCTTTCAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | TCAGATAAACGCACAGGAAGGAGCATGAGTGTTATGGCAAACACGCGAGGCCTGTTCCTCTATAGTTACTaGAGTTTCTTGAAGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: SDKRTGRSMSVMANTRGLFLYSY*SFLKAE Trigger: CTCAGCCTTCAAGAAACTCAAGTAACTATAGAGGAA...CAGGCCTCGCGTGTTTGCCATAACACTCATGCTCCTTCCTGTGCGTTTATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCATCCTCTTTATTTACTTaGGCTCGCTCAACAGTGAAT | + |
Preference number: 5 (lower is better) Translates to: GNQRSVVGFLGTEYVPLSSSLFT*ARSTVN Trigger: ATTCACTGTTGAGCGAGCCAAAGTAAATAAAGAGGA...TGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACTCTCTCCATCTTCTATaGCACTGTCATGGTCTGCAA | + |
Preference number: 5 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNSLHLL*HCHGLQ Trigger: TTGCAGACCATGACAGTGCAATAGAAGATGGAGAGA...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGGAGACAACCAACCTCTaGTCCATTTCATATGATGAA | + |
Preference number: 5 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGETTNL*SISYDE Trigger: TTCATCATATGAAATGGACAAGAGGTTGGTTGTCTC...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGCCGCTATCACCTAGATGTCTCAATTTTTaGGTCAGAGAGTCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: NQRSVVGFLGTEYVPLSPRCLNF*VRESSE Trigger: TTCTGATGACTCTCTGACCAAAAAATTGAGACATCT...AGGTGATAGCGGCACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS GCA 90 bp | GTCATCGTCTCCTTCAAGGTCAATGTACTGGATTTGATCCAAAGCTaGATCTGCAAGTTCTACTGGACCTATCAAATGGCAAAGATGGTC | + |
Preference number: 5 (lower is better) Translates to: VIVSFKVNVLDLIQS*ICKFYWTYQMAKMV Trigger: GACCATCTTTGCCATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGAGACGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGTACTGAGTATGTGGAGACAACCAACCTCTaGTCCATTTCATATGATGAA | + |
Preference number: 5 (lower is better) Translates to: KLNGNQRSVVGFLGTEYVETTNL*SISYDE Trigger: TTCATCATATGAAATGGACAAGAGGTTGGTTGTCTC...CACATACTCAGTACCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCCTGGGAGATGTCTCAATTTTTaGGTCAGAGAGTCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: QSCLEAKRKSKVSGGLPGRCLNF*VRESSE Trigger: TTCTGATGACTCTCTGACCAAAAAATTGAGACATCT...CCCAGGAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACCAGAGGATTATAAAATaGGACAGACTCGGTAGATGG | + |
Preference number: 5 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNQRIIK*DRLGRW Trigger: CCATCTACCGAGTCTGTCCAATTTTATAATCCTCTG...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 90 bp | GAAGAAAGAAGGTCATCGTCTCCTTCAAGGTCAATGTACTGGATTTaGTCCAAAGCTGCATCTGCAAGTTCTACTGGACCTATCAAATGG | + |
Preference number: 5 (lower is better) Translates to: EERRSSSPSRSMYWI*SKAASASSTGPIKW Trigger: CCATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGAGACGATGACCTTCTTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 90 bp | GACAAGCTCCTCTTAGTTGGAGAAAGCTTGCTAGTGTTTGAAACATaGGGCATTCTGCGGCTTACCGGTGTTTTTAATGCAGTTTTCTTG | + |
Preference number: 5 (lower is better) Translates to: DKLLLVGESLLVFET*GILRLTGVFNAVFL Trigger: CAAGAAAACTGCATTAAAAACACCGGTAAGCCGCAGAATGCCTCATGTTTCAAACACTAGCAAGCTTTCTCCAACTAAGAGGAGCTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GGAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACTTCCTCTATAGTTACTaGAGTTTCTTGAAGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: GDCLFTTGNTSGGGVHTNFLYSY*SFLKAE Trigger: CTCAGCCTTCAAGAAACTCAAGTAACTATAGAGGAA...GTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCTCCTCTTTATTTACTTaGGCTCGCTCAACAGTGAAT | + |
Preference number: 5 (lower is better) Translates to: QNKVVWKLNGNQRSVVGFSSLFT*ARSTVN Trigger: ATTCACTGTTGAGCGAGCCAAAGTAAATAAAGAGGA...GAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 |
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CDS-3UTR CAA 90 bp | CAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGTGGGCTTCGAGACAACCAACCTCTaGTCCATTTCATATGATGAA | + |
Preference number: 5 (lower is better) Translates to: QNKVVWKLNGNQRSVVGFETTNL*SISYDE Trigger: TTCATCATATGAAATGGACAAGAGGTTGGTTGTCTC...GAAGCCCACCACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACGAGACAACCAACCTCTaGTCCATTTCATATGATGAA | + |
Preference number: 5 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNETTNL*SISYDE Trigger: TTCATCATATGAAATGGACAAGAGGTTGGTTGTCTC...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAACAATCAGAAAGGCTTATaGGAAAGTACTTGGGATTGC | + |
Preference number: 5 (lower is better) Translates to: FSWNLSCCTAIRSVSLCNNQKGL*ESTWDC Trigger: GCAATCCCAAGTACTTTCCAATAAGCCTTTCTGATT...GTTACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTTACCTGCCTGGTTACTaGCCATTCCTTCTTTCTGTG | + |
Preference number: 5 (lower is better) Translates to: MLPHVSNFSWNLSCCTAIYLPGY*PFLLSV Trigger: CACAGAAAGAAGGAATGGCAAGTAACCAGGCAGGTA...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 90 bp | TGGTCATATATGCTATCACCAACTTCCAGAGAAGACTCTCTACTATaGGTATCAGTGAGGTGGCTCTCAGTGGATCTAGTTATTGACGAA | + |
Preference number: 5 (lower is better) Translates to: WSYMLSPTSREDSLL*VSVRWLSVDLVIDE Trigger: TTCGTCAATAACTAGATCCACTGAGAGCCACCTCACTGATACTCATAGTAGAGAGTCTTCTCTGGAAGTTGGTGATAGCATATATGACCA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTTTCCTCTATAGTTACTaGAGTTTCTTGAAGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCFLYSY*SFLKAE Trigger: CTCAGCCTTCAAGAAACTCAAGTAACTATAGAGGAA...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTTCTCTCCATCTTCTATaGCACTGTCATGGTCTGCAA | + |
Preference number: 5 (lower is better) Translates to: MLPHVSNFSWNLSCCTAISLHLL*HCHGLQ Trigger: TTGCAGACCATGACAGTGCAATAGAAGATGGAGAGA...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGGTTATCTCTGATCTaGGCTAGATTCTGCCAAAGT | + |
Preference number: 5 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRRLSLI*ARFCQS Trigger: ACTTTGGCAGAATCTAGCCAAGATCAGAGATAACCT...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTGGAAAGTACTTGGGATaGCTAAAACTTTGCGCTCCA | + |
Preference number: 5 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSGKYLG*LKLCAP Trigger: TGGAGCGCAAAGTTTTAGCAATCCCAAGTACTTTCC...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCCTTATTGGAAAGTACTaGGGATTGCTAAAACTTTGC | + |
Preference number: 5 (lower is better) Translates to: ETAYLLQEILLEVGCIPTLIGKY*GLLKLC Trigger: GCAAAGTTTTAGCAATCCCAAGTACTTTCCAATAAG...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | AATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGTGTTTCTCTCTGTAATCAGAAAGGCTTATaGGAAAGTACTTGGGATTGC | + |
Preference number: 5 (lower is better) Translates to: NFSWNLSCCTAIRSVSLCNQKGL*ESTWDC Trigger: GCAATCCCAAGTACTTTCCAATAAGCCTTTCTGATT...ACAGAGAGAAACACTCCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GAGACTGCTTATTTACTACAGGAAATACTTCTGGAGGTGGGGTGCATACCAACCAGATGTCTCAATTTTTaGGTCAGAGAGTCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: ETAYLLQEILLEVGCIPTRCLNF*VRESSE Trigger: TTCTGATGACTCTCTGACCAAAAAATTGAGACATCT...GGTTGGTATGCACCCCACCTCCAGAAGTATTTCCTGTAGTAAATAAGCAGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS TCA 90 bp | GGATTTGAGCATCATCAATATCTGAAAGCTCATCAGAAAGGGGAGTaGGAACAATATCAGGCAAGAAGGGTTTGGAAGTATGGATCAGAA | + |
Preference number: 5 (lower is better) Translates to: GFEHHQYLKAHQKGE*EQYQARRVWKYGSE Trigger: TTCTGATCCATACTTCCAAACCCTTCTTGCCTGATATTGTTCTCACTCCCCTTTCTGATGAGCTTTCAGATATTGATGATGCTCAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219432.2 |
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CDS GCA 90 bp | CTGCAAGTTCTACTGGACCTATCAAATGGCAAAGATGGTCATATATaGTATCACCAACTTCCAGAGAAGACTCTCTACTATGAGTATCAG | + |
Preference number: 5 (lower is better) Translates to: LQVLLDLSNGKDGHI*YHQLPEKTLYYEYQ Trigger: CTGATACTCATAGTAGAGAGTCTTCTCTGGAAGTTGGTGATAGCATATATGACCATCTTTGCCATTTGATAGGTCCAGTAGAACTTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS GCA 90 bp | GTCTCCTTCAAGGTCAATGTACTGGATTTGATCCAAAGCTGCATCTaGAAGTTCTACTGGACCTATCAAATGGCAAAGATGGTCATATAT | + |
Preference number: 5 (lower is better) Translates to: VSFKVNVLDLIQSCI*KFYWTYQMAKMVIY Trigger: ATATATGACCATCTTTGCCATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 90 bp | AAAGCTGCATCTGCAAGTTCTACTGGACCTATCAAATGGCAAAGATaGTCATATATGCTATCACCAACTTCCAGAGAAGACTCTCTACTA | + |
Preference number: 5 (lower is better) Translates to: KAASASSTGPIKWQR*SYMLSPTSREDSLL Trigger: TAGTAGAGAGTCTTCTCTGGAAGTTGGTGATAGCATATATGACCATCTTTGCCATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 90 bp | TTCTGGTTTTACTTCCTGACCTGTGTACTCTACTTTATGGAAAGATaGTATTTCCTCTCTAGTTACGTCAATAAGCACTTCCTGGGAAGC | + |
Preference number: 5 (lower is better) Translates to: FWFYFLTCVLYFMER*YFLSSYVNKHFLGS Trigger: GCTTCCCAGGAAGTGCTTATTGACGTAACTAGAGAGGAAATACCATCTTTCCATAAAGTAGAGTACACAGGTCAGGAAGTAAAACCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTAGGTTATCTCTGATCTaGGCTAGATTCTGCCAAAGT | + |
Preference number: 5 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSRLSLI*ARFCQS Trigger: ACTTTGGCAGAATCTAGCCAAGATCAGAGATAACCT...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | GAGCCAGTGGCTATGGTAAGATATGGATCATGTACTTTGATGAAGATTACTGGAGAGAAGAAAAGGGTATaGCATTTTGGGTTTGTGACG | + |
Preference number: 5 (lower is better) Translates to: EPVAMVRYGSCTLMKITGEKKRV*HFGFVT Trigger: CGTCACAAACCCAAAATGCAATACCCTTTTCTTCTC...TCCAGTAATCTTCATCAAAGTACATGATCCATATCTTACCATAGCCACTGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219323.2 |
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CDS TCA 90 bp | ACACTATTTCGTTTCTTAGCGGCAATTTTCATGATTTTGGCCCTATaGGTTACTGTTTCAGACAAGCTCCTCTTAGTTGGAGAAAGCTTG | + |
Preference number: 5 (lower is better) Translates to: TLFRFLAAIFMILAL*VTVSDKLLLVGESL Trigger: CAAGCTTTCTCCAACTAAGAGGAGCTTGTCTGAAACAGTAACTCATAGGGCCAAAATCATGAAAATTGCCGCTAAGAAACGAAATAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGTCTCTCCATCTTCTATaGCACTGTCATGGTCTGCAA | + |
Preference number: 5 (lower is better) Translates to: TDVQLCSSSLNASINLNVSLHLL*HCHGLQ Trigger: TTGCAGACCATGACAGTGCAATAGAAGATGGAGAGA...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | ATGTTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTTCCTCTTTATTTACTTaGGCTCGCTCAACAGTGAAT | + |
Preference number: 5 (lower is better) Translates to: MLPHVSNFSWNLSCCTAISSLFT*ARSTVN Trigger: ATTCACTGTTGAGCGAGCCAAAGTAAATAAAGAGGA...AATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 |
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CDS-3UTR CAA 90 bp | TTACCACATGTAAGTAATTTCAGTTGGAATCTGAGCTGCTGCACTGCCATTAGGAGATGTCTCAATTTTTaGGTCAGAGAGTCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: LPHVSNFSWNLSCCTAIRRCLNF*VRESSE Trigger: TTCTGATGACTCTCTGACCAAAAAATTGAGACATCT...CCTAATGGCAGTGCAGCAGCTCAGATTCCAACTGAAATTACTTACATGTGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGAGGTTATCTCTGATCTaGGCTAGATTCTGCCAAAGT | + |
Preference number: 5 (lower is better) Translates to: TDVQLCSSSLNASINLNVRLSLI*ARFCQS Trigger: ACTTTGGCAGAATCTAGCCAAGATCAGAGATAACCT...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CCTAAAAAGGCAGAACAAAGTTGTCTGGAAGCTAAACGGAAATCAAAGGTCAGTCTTATTGGAAAGTACTaGGGATTGCTAAAACTTTGC | + |
Preference number: 5 (lower is better) Translates to: PKKAEQSCLEAKRKSKVSLIGKY*GLLKLC Trigger: GCAAAGTTTTAGCAATCCCAAGTACTTTCCAATAAG...ACTGACCTTTGATTTCCGTTTAGCTTCCAGACAACTTTGTTCTGCCTTTTTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | CACTGCCCAGAAATGAGATACCAACTTGGGAAGAAAATGTTACCACATGTAAGTCTTATTGGAAAGTACTaGGGATTGCTAAAACTTTGC | + |
Preference number: 5 (lower is better) Translates to: HCPEMRYQLGKKMLPHVSLIGKY*GLLKLC Trigger: GCAAAGTTTTAGCAATCCCAAGTACTTTCCAATAAG...ACTTACATGTGGTAACATTTTCTTCCCAAGTTGGTATCTCATTTCTGGGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS-3UTR CAA 90 bp | ACAGATGTGCAGCTTTGCTCTAGCTCTCTAAATGCTTCCATTAATTTAAATGTGCTTATTGGAAAGTACTaGGGATTGCTAAAACTTTGC | + |
Preference number: 5 (lower is better) Translates to: TDVQLCSSSLNASINLNVLIGKY*GLLKLC Trigger: GCAAAGTTTTAGCAATCCCAAGTACTTTCCAATAAG...CACATTTAAATTAATGGAAGCATTTAGAGAGCTAGAGCAAAGCTGCACATCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS CCA 72 bp | CTGTGCTGCTGGGGCAGCGTCACTGGGTGGAATCTCTaGGTAGGATCCTGCGTCAGCAGGGAAATGATGGTA | + |
Preference number: 6 (lower is better) Translates to: LCCWGSVTGWNL*VGSCVSREMMV Trigger: TACCATCATTTCCCTGCTGACGCAGGATCCTACCCAGAGATTCCACCCAGTGACGCTGCCCCAGCAGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS GCA 72 bp | AGATCCCTCAGTGGAGCCTCGGGTGGCATTCTGTTCTaGCTCTGTGGGGAAACATTTGCCTTCGGCTTCGAA | + |
Preference number: 6 (lower is better) Translates to: RSLSGASGGILF*LCGETFAFGFE Trigger: TTCGAAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCACTGAGGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 72 bp | CAGTGGAGCCTCGGGTGGCATTCTGTTCTGCCTCTGTaGGGAAACATTTGCCTTCGGCTTCGAAAGAGCATG | + |
Preference number: 6 (lower is better) Translates to: QWSLGWHSVLPL*GNICLRLRKSM Trigger: CATGCTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | CTCTGTGGAACTCTGCAAGCTTGGAGCATGACGGGATaGACTGTCAACGACAGGAACTGCACCTTTGGCTCG | + |
Preference number: 6 (lower is better) Translates to: LCGTLQAWSMTG*TVNDRNCTFGS Trigger: CGAGCCAAAGGTGCAGTTCCTGTCGTTGACAGTTCATCCCGTCATGCTCCAAGCTTGCAGAGTTCCACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | GACGAAGCCTCTGTGGAACTCTGCAAGCTTGGAGCATaGCGGGATGAACTGTCAACGACAGGAACTGCACCT | + |
Preference number: 6 (lower is better) Translates to: DEASVELCKLGA*RDELSTTGTAP Trigger: AGGTGCAGTTCCTGTCGTTGACAGTTCATCCCGTCATGCTCCAAGCTTGCAGAGTTCCACAGAGGCTTCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 72 bp | TACATGACTGTACAGATCCCTCAGTGGAGCCTCGGGTaGCATTCTGTTCTGCCTCTGTGGGGAAACATTTGC | + |
Preference number: 6 (lower is better) Translates to: YMTVQIPQWSLG*HSVLPLWGNIC Trigger: GCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCACTGAGGGATCTGTACAGTCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CAA 90 bp | GTGGAGCCTCGGGTGGCATTCTGTTCTGCCTCTGTGGGGAAACATTaGCCTTCGGCTTCGAAAGAGCATGGACAACAGTTTTATAAACGC | + |
Preference number: 6 (lower is better) Translates to: VEPRVAFCSASVGKH*PSASKEHGQQFYKR Trigger: GCGTTTATAAAACTGTTGTCCATGCTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCGAGGCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | GTACACACCAGGCTTTACAAGGTCTGTACCACTAGTTaGGCTGGTCTGTGTGTTGCTGGTGGTGCTACTGCT | + |
Preference number: 6 (lower is better) Translates to: VHTRLYKVCTTS*AGLCVAGGATA Trigger: AGCAGTAGCACCACCAGCAACACACAGACCAGCTCAACTAGTGGTACAGACCTTGTAAAGCCTGGTGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | ACTACCTGCCTGGTTACTTGCCATTCCTTCTTTCTGTaGTGTGGCTGTGGGGATCTCTGTGGATTCCCTCAC | + |
Preference number: 6 (lower is better) Translates to: TTCLVTCHSFFL*CGCGDLCGFPH Trigger: GTGAGGGAATCCACAGAGATCCCCACAGCCACATCACAGAAAGAAGGAATGGCAAGTAACCAGGCAGGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CAA 72 bp | CGGGTGGCATTCTGTTCTGCCTCTGTGGGGAAACATTaGCCTTCGGCTTCGAAAGAGCATGGACAACAGTTT | + |
Preference number: 6 (lower is better) Translates to: RVAFCSASVGKH*PSASKEHGQQF Trigger: AAACTGTTGTCCATGCTCTTTCGAAGCCGAAGGCAAATGTTTCCCCACAGAGGCAGAACAGAATGCCACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CAA 90 bp | CCAGGCTTTACAAGGTCTGTACCACTAGTTGAGCTGGTCTGTGTGTaGCTGGTGGTGCTACTGCTATTACTGCTAAAGCCACTGAGCTTC | + |
Preference number: 6 (lower is better) Translates to: PGFTRSVPLVELVCV*LVVLLLLLLKPLSF Trigger: GAAGCTCAGTGGCTTTAGCAGTAATAGCAGTAGCACCACCAGCAACACACAGACCAGCTCAACTAGTGGTACAGACCTTGTAAAGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | AGTATCAGTGAGGTGGCTCTCAGTGGATCTAGTTATTaGCGAAGCCTCTGTGGAACTCTGCAAGCTTGGAGC | + |
Preference number: 6 (lower is better) Translates to: SISEVALSGSSY*RSLCGTLQAWS Trigger: GCTCCAAGCTTGCAGAGTTCCACAGAGGCTTCGTCAATAACTAGATCCACTGAGAGCCACCTCACTGATACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 72 bp | AACAGGAGCACTTTTAGCACTGCGAATATAGGCCGATaGCAGAGCACATTCACCAATGGATCGGCTTCTCAT | + |
Preference number: 6 (lower is better) Translates to: NRSTFSTANIGR*QSTFTNGSASH Trigger: ATGAGAAGCCGATCCATTGGTGAATGTGCTCTGCCATCGGCCTATATTCGCAGTGCTAAAAGTGCTCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219432.2 |
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CDS TCA 72 bp | AGGTCATCGTCTCCTTCAAGGTCAATGTACTGGATTTaGTCCAAAGCTGCATCTGCAAGTTCTACTGGACCT | + |
Preference number: 6 (lower is better) Translates to: RSSSPSRSMYWI*SKAASASSTGP Trigger: AGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGAGACGATGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | CAAGCTCCTCTTAGTTGGAGAAAGCTTGCTAGTGTTTaGAACATGAGGCATTCTGCGGCTTACCGGTGTTTT | + |
Preference number: 6 (lower is better) Translates to: QAPLSWRKLASV*NMRHSAAYRCF Trigger: AAAACACCGGTAAGCCGCAGAATGCCTCATGTTTCAAACACTAGCAAGCTTTCTCCAACTAAGAGGAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS GCA 72 bp | CTCTGTAAACACTCAGGACTTGTAGTGCCTAAATACTaGAGGAGCTCGTCAAGAACATCTTCTTCCTCTCGT | + |
Preference number: 6 (lower is better) Translates to: LCKHSGLVVPKY*RSSSRTSSSSR Trigger: ACGAGAGGAAGAAGATGTTCTTGACGAGCTCCTGCAGTATTTAGGCACTACAAGTCCTGAGTGTTTACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000219432.2 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS CCA 72 bp | AAACGGCCTGAGTGCCAGCTTGAATATTCTGTTCTGTaGCTTCTTCACAGACATGAAAAGCTTCTTGGTAGG | + |
Preference number: 6 (lower is better) Translates to: KRPECQLEYSVL*LLHRHEKLLGR Trigger: CCTACCAAGAAGCTTTTCATGTCTGTGAAGAAGCCACAGAACAGAATATTCAAGCTGGCACTCAGGCCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000219432.2 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS CAA 72 bp | AAGGTCATCGTCTCCTTCAAGGTCAATGTACTGGATTaGATCCAAAGCTGCATCTGCAAGTTCTACTGGACC | + |
Preference number: 6 (lower is better) Translates to: KVIVSFKVNVLD*IQSCICKFYWT Trigger: GGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGAGACGATGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CAA 90 bp | AGCTCATCAGAAAGGGGAGTGAGAACAATATCAGGCAAGAAGGGTTaGGAAGTATGGATCAGAACAGGAGCACTTTTAGCACTGCGAATA | + |
Preference number: 6 (lower is better) Translates to: SSSERGVRTISGKKG*EVWIRTGALLALRI Trigger: TATTCGCAGTGCTAAAAGTGCTCCTGTTCTGATCCATACTTCCAAACCCTTCTTGCCTGATATTGTTCTCACTCCCCTTTCTGATGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219432.2 |
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CDS TCA 72 bp | ATGCTATCACCAACTTCCAGAGAAGACTCTCTACTATaGGTATCAGTGAGGTGGCTCTCAGTGGATCTAGTT | + |
Preference number: 6 (lower is better) Translates to: MLSPTSREDSLL*VSVRWLSVDLV Trigger: AACTAGATCCACTGAGAGCCACCTCACTGATACTCATAGTAGAGAGTCTTCTCTGGAAGTTGGTGATAGCAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CAA 72 bp | GAAAGGGGAGTGAGAACAATATCAGGCAAGAAGGGTTaGGAAGTATGGATCAGAACAGGAGCACTTTTAGCA | + |
Preference number: 6 (lower is better) Translates to: ERGVRTISGKKG*EVWIRTGALLA Trigger: TGCTAAAAGTGCTCCTGTTCTGATCCATACTTCCAAACCCTTCTTGCCTGATATTGTTCTCACTCCCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219432.2 |
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CDS TCA 72 bp | CTCTTAGTTGGAGAAAGCTTGCTAGTGTTTGAAACATaGGGCATTCTGCGGCTTACCGGTGTTTTTAATGCA | + |
Preference number: 6 (lower is better) Translates to: LLVGESLLVFET*GILRLTGVFNA Trigger: TGCATTAAAAACACCGGTAAGCCGCAGAATGCCTCATGTTTCAAACACTAGCAAGCTTTCTCCAACTAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS GCA 72 bp | TCCTTCAAGGTCAATGTACTGGATTTGATCCAAAGCTaGATCTGCAAGTTCTACTGGACCTATCAAATGGCA | + |
Preference number: 6 (lower is better) Translates to: SFKVNVLDLIQS*ICKFYWTYQMA Trigger: TGCCATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CAA 90 bp | AGAAGAAAGAAGGTCATCGTCTCCTTCAAGGTCAATGTACTGGATTaGATCCAAAGCTGCATCTGCAAGTTCTACTGGACCTATCAAATG | + |
Preference number: 6 (lower is better) Translates to: RRKKVIVSFKVNVLD*IQSCICKFYWTYQM Trigger: CATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTTGAAGGAGACGATGACCTTCTTTCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | CGTTTCTTAGCGGCAATTTTCATGATTTTGGCCCTATaGGTTACTGTTTCAGACAAGCTCCTCTTAGTTGGA | + |
Preference number: 6 (lower is better) Translates to: RFLAAIFMILAL*VTVSDKLLLVG Trigger: TCCAACTAAGAGGAGCTTGTCTGAAACAGTAACTCATAGGGCCAAAATCATGAAAATTGCCGCTAAGAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS GCA 72 bp | AAGGTCAATGTACTGGATTTGATCCAAAGCTGCATCTaGAAGTTCTACTGGACCTATCAAATGGCAAAGATG | + |
Preference number: 6 (lower is better) Translates to: KVNVLDLIQSCI*KFYWTYQMAKM Trigger: CATCTTTGCCATTTGATAGGTCCAGTAGAACTTGCAGATGCAGCTTTGGATCAAATCCAGTACATTGACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS TCA 72 bp | GGCTTTGGTCTGATCTGTGGGATATCAAGTACAGGATaGTACAAACTATTCTCCTTGCAAATGTTTGGGAAA | + |
Preference number: 6 (lower is better) Translates to: GFGLICGISSTG*YKLFSLQMFGK Trigger: TTTCCCAAACATTTGCAAGGAGAATAGTTTGTATCATCCTGTACTTGATATCCCACAGATCAGACCAAAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000219432.2 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS GCA 72 bp | CTACTGGACCTATCAAATGGCAAAGATGGTCATATATaGTATCACCAACTTCCAGAGAAGACTCTCTACTAT | + |
Preference number: 6 (lower is better) Translates to: LLDLSNGKDGHI*YHQLPEKTLYY Trigger: ATAGTAGAGAGTCTTCTCTGGAAGTTGGTGATAGCATATATGACCATCTTTGCCATTTGATAGGTCCAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 72 bp | TTCAGCATCCTTCTTTATCATCACATAATGAGGCTTTaGTCTGATCTGTGGGATATCAAGTACAGGATGATA | + |
Preference number: 6 (lower is better) Translates to: FSILLYHHIMRL*SDLWDIKYRMI Trigger: TATCATCCTGTACTTGATATCCCACAGATCAGACCAAAGCCTCATTATGTGATGATAAAGAAGGATGCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085385.7 ENSMUST00000110687.8 ENSMUST00000219432.2 ENSMUST00000220367.2 ENSMUST00000226244.2 |
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CDS TCA 72 bp | AATTGGACAGACTCGGTAGATGGTCTAAAAGTAACATaGACACTATTTCGTTTCTTAGCGGCAATTTTCATG | + |
Preference number: 6 (lower is better) Translates to: NWTDSVDGLKVT*TLFRFLAAIFM Trigger: CATGAAAATTGCCGCTAAGAAACGAAATAGTGTTCATGTTACTTTTAGACCATCTACCGAGTCTGTCCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |
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CDS CCA 72 bp | TTCCAGAGGATTATAAAATTGGACAGACTCGGTAGATaGTCTAAAAGTAACATGAACACTATTTCGTTTCTT | + |
Preference number: 6 (lower is better) Translates to: FQRIIKLDRLGR*SKSNMNTISFL Trigger: AAGAAACGAAATAGTGTTCATGTTACTTTTAGACCATCTACCGAGTCTGTCCAATTTTATAATCCTCTGGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226244.2 |