Pregenerated sensors for RALBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024096Ensembl transcript IDs: ENSMUST00000024905.11, ENSMUST00000166543.10, ENSMUST00000232848.2, ENSMUST00000233054.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTGTGGAAGGCACAAACAAGAGTGGCCAGAGACCCTGCAGGGCTaGGGAGACCACGAGCGTCCACGAGGCAGGCGCAGAAGTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: RCGRHKQEWPETLQG*GDHERPRGRRRSDL Trigger: CAGGTCACTTCTGCGCCTGCCTCGTGGACGCTCGTGGTCTCCCCAGCCCTGCAGGGTCTCTGGCCACTCTTGTTTGTGCCTTCCACACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| 3UTR TCA 90 bp | ACCTCCGACCACCTCAGAGAAGAGGCCTTTGCTGATCCCTGGCAGTaGGTGAGTGGCTTGCACTGCCCAGGCTGGTGGCAGGCTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: TSDHLREEAFADPWQ*VSGLHCPGWWQAAQ Trigger: CTGTGCAGCCTGCCACCAGCCTGGGCAGTGCAAGCCACTCACTCACTGCCAGGGATCAGCAAAGGCCTCTTCTCTGAGGTGGTCGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCTGGTGGCAGGCTGCACAGGTAACTTCTGTCTGCCACCAACCTGGGCCGAGGCACAAACAAGAGTaGCCAGAGACCCTGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGWWQAAQVTSVCHQPGPRHKQE*PETLQG Trigger: GCCCTGCAGGGTCTCTGGCCACTCTTGTTTGTGCCT...CGGCCCAGGTTGGTGGCAGACAGAAGTTACCTGTGCAGCCTGCCACCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | GACCTCCCTGGGGGCCACTCATCTGACAGTGAGATCTGGCTGCCTAAGAGGCAGCACTGCCCAGGCTGGTaGCAGGCTGCACAGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: DLPGGHSSDSEIWLPKRQHCPGW*QAAQVT Trigger: AGTTACCTGTGCAGCCTGCCACCAGCCTGGGCAGTG...CTGCCTCTTAGGCAGCCAGATCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCTGGTGGCAGGCTGCACAGGTAACTTCTGTCTGCCACCAACCTGGGCCGGACCCAACTCGGAAGTaGAAAAGCAACGTGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PGWWQAAQVTSVCHQPGPDPTRK*KSNVVQ Trigger: CTGCACCACGTTGCTTTTCCACTTCCGAGTTGGGTC...CGGCCCAGGTTGGTGGCAGACAGAAGTTACCTGTGCAGCCTGCCACCAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCGAGACCCTGCAGGGCTaGGGAGACCACGAGCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLTLECGICLQSHRGPPETLQG*GDHERP Trigger: TGGACGCTCGTGGTCTCCCCAGCCCTGCAGGGTCTC...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCAAGGTGGTCACCTCCGACCACCTCAGAGAAGAGGCCTTTGCTGATCCCCAGGTAACTTCTGTCTaGCACCAACCTGGGCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: RVKVVTSDHLREEAFADPQVTSV*HQPGPS Trigger: GGACGGCCCAGGTTGGTGGCAGACAGAAGTTACCTG...GGGATCAGCAAAGGCCTCTTCTCTGAGGTGGTCGGAGGTGACCACCTTGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | GACCTCCCTGGGGGCCACTCATCTGACAGTGAGATCTGGCTGCCTAAGAGGCAGGACCCAACTCGGAAGTaGAAAAGCAACGTGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: DLPGGHSSDSEIWLPKRQDPTRK*KSNVVQ Trigger: CTGCACCACGTTGCTTTTCCACTTCCGAGTTGGGTC...CTGCCTCTTAGGCAGCCAGATCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCATCCCTGGCAGTGAGTaGGTGGCTTGCACTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLTLECGICLQSHRGPPIPGSE*VACTAQ Trigger: CTGGGCAGTGCAAGCCACTCACTCACTGCCAGGGAT...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR TCA 90 bp | GCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGAGAAGAGGCCTTTGCTaGTCCCTGGCAGTGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AHFRVWDLSSEPQGTSLGRRGLC*SLAVSE Trigger: CTCACTCACTGCCAGGGATCAGCAAAGGCCTCTTCT...CCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCGCAGAAGTGACCTGATTTGGTTCCTACCCTTTGATAAGAAAGAGAGCCCCCCGTGTGTCCACTaGTTCAGCCTCCCAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRRRSDLIWFLPFDKKESPPCVH*FSLPGP Trigger: AGGGCCTGGGAGGCTGAAGCAGTGGACACACGGGGG...GCTCTCTTTCTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCTGCGCCTGCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTCCCTGGGGGCCACTCATCTGACAGTGAGATCTGGCTGCCTAAGAGGCAGCAGCGAGAGCCTTTCTaGCCAGTCAGAGAATATGAG | + |
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Preference number: 2 (lower is better) Translates to: DLPGGHSSDSEIWLPKRQQREPF*PVREYE Trigger: CTCATATTCTCTGACTGGCCAGAAAGGCTCTCGCTG...CTGCCTCTTAGGCAGCCAGATCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCAGTGTGGAGAAGGGCTCTGGTTTGAGAAGCTTCCTGTGCAACGCCTCACACTGCCCAGGCTGGTaGCAGGCTGCACAGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: KVSVEKGSGLRSFLCNASHCPGW*QAAQVT Trigger: AGTTACCTGTGCAGCCTGCCACCAGCCTGGGCAGTG...TGAGGCGTTGCACAGGAAGCTTCTCAAACCAGAGCCCTTCTCCACACTGACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR GCA 90 bp | GGGTTTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCGGAAAAGCAACGTGGTaGAGGGAACCCCAGCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: GFVAHFRVWDLSSEPQGTGKATW*REPQRE Trigger: CTCTCGCTGGGGTTCCCTGCACCACGTTGCTTTTCC...GGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTGTCTGCCACCAACCTaGGCCGTCCTGACTCACACA | + |
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Preference number: 2 (lower is better) Translates to: LSLTLECGICLQSHRGPPCLPPT*AVLTHT Trigger: TGTGTGAGTCAGGACGGCCCAGGTTGGTGGCAGACA...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCGCCTCAGAGTCAAGGTaGTCACCTCCGACCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSLTLECGICLQSHRGPPASESR*SPPTTS Trigger: TGAGGTGGTCGGAGGTGACCACCTTGACTCTGAGGC...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR GCA 90 bp | GCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGGACACTATCTGGAAATaGCTGTGTTCCCTGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: AHFRVWDLSSEPQGTSLGDTIWK*LCSLQA Trigger: GGCTTGCAGGGAACACAGGCATTTCCAGATAGTGTC...CCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | GACCTCCCTGGGGGCCACTCATCTGACAGTGAGATCTGGCTGCCTAAGAGGCAGTCACTGTGGTTTTCTTaGAAGGTCAGTGTGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: DLPGGHSSDSEIWLPKRQSLWFS*KVSVEK Trigger: CTTCTCCACACTGACCTTCCAAGAAAACCACAGTGA...CTGCCTCTTAGGCAGCCAGATCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGGCCACTCATCTGACAGTGAGACAGCTGAAGTCACTGTaGTTTTCTTGGAAGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSSEPQGTSLGATHLTVRQLKSL*FSWKVS Trigger: ACTGACCTTCCAAGAAAACCACAGTGACTTCAGCTG...TCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCGTGAGAGCATTTACATaGCTTATCCTGGCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSLTLECGICLQSHRGPPVRAFT*LILAEV Trigger: CACCTCTGCCAGGATAAGCCATGTAAATGCTCTCAC...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCGCAGAAGTGACCTGATTTGGTTCCTACCCTTTGATAAGAAAGAGAGCGACACTATCTGGAAATaGCTGTGTTCCCTGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GRRRSDLIWFLPFDKKESDTIWK*LCSLQA Trigger: GGCTTGCAGGGAACACAGGCATTTCCAGATAGTGTC...GCTCTCTTTCTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCTGCGCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGTGGATGTTGTACACCGGACGGGATGCAGCAAGGCGTTTGTACATTTACAGCGAGAGCCTTTCTaGCCAGTCAGAGAATATGAG | + |
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Preference number: 2 (lower is better) Translates to: YKVDVVHRTGCSKAFVHLQREPF*PVREYE Trigger: CTCATATTCTCTGACTGGCCAGAAAGGCTCTCGCTG...TAAATGTACAAACGCCTTGCTGCATCCCGTCCGGTGTACAACATCCACTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024905.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGGATGTTGTACACCGGACGGGATGCAGCAAGGCGTTTGTACATTTATATGTGAGAGCATTTACATaGCTTATCCTGGCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KVDVVHRTGCSKAFVHLYVRAFT*LILAEV Trigger: CACCTCTGCCAGGATAAGCCATGTAAATGCTCTCAC...ATATAAATGTACAAACGCCTTGCTGCATCCCGTCCGGTGTACAACATCCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024905.11 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGTGGATGTTGTACACCGGACGGGATGCAGCAAGGCGTTTGTACATTTAAGAAGTGACCTGATTTaGTTCCTACCCTTTGATAAG | + |
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Preference number: 2 (lower is better) Translates to: YKVDVVHRTGCSKAFVHLRSDLI*FLPFDK Trigger: CTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCT...TAAATGTACAAACGCCTTGCTGCATCCCGTCCGGTGTACAACATCCACTTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024905.11 |
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| 3UTR GCA 72 bp | AGTGAGTGGCTTGCACTGCCCAGGCTGGTGGCAGGCTaGACAGGTAACTTCTGTCTGCCACCAACCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SEWLALPRLVAG*TGNFCLPPTWA Trigger: GGCCCAGGTTGGTGGCAGACAGAAGTTACCTGTGCAGCCTGCCACCAGCCTGGGCAGTGCAAGCCACTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR TCA 72 bp | TCAGAGAAGAGGCCTTTGCTGATCCCTGGCAGTGAGTaGGTGGCTTGCACTGCCCAGGCTGGTGGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SEKRPLLIPGSE*VACTAQAGGRL Trigger: CAGCCTGCCACCAGCCTGGGCAGTGCAAGCCACTCACTCACTGCCAGGGATCAGCAAAGGCCTCTTCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR TCA 72 bp | CACCTCAGAGAAGAGGCCTTTGCTGATCCCTGGCAGTaGGTGAGTGGCTTGCACTGCCCAGGCTGGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: HLREEAFADPWQ*VSGLHCPGWWQ Trigger: CTGCCACCAGCCTGGGCAGTGCAAGCCACTCACTCACTGCCAGGGATCAGCAAAGGCCTCTTCTCTGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR-3UTR CAA 90 bp | TTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGGCCACTCATCTGACAGTGAGAGAGAAGGGCTCTGGTTaGAGAAGCTTCCTGTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: LSSEPQGTSLGATHLTVREKGSG*RSFLCN Trigger: GTTGCACAGGAAGCTTCTCAAACCAGAGCCCTTCTC...TCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR GCA 72 bp | AGTGTGGAGAAGGGCTCTGGTTTGAGAAGCTTCCTGTaGAACGCCTCAGAGTCAAGGTGGTCACCTCCGACC | + |
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Preference number: 3 (lower is better) Translates to: SVEKGSGLRSFL*NASESRWSPPT Trigger: GGTCGGAGGTGACCACCTTGACTCTGAGGCGTTGCACAGGAAGCTTCTCAAACCAGAGCCCTTCTCCACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR CCA 72 bp | GAGCCCTCCTGTGGGTTTGTCGCTCACTTTAGAGTGTaGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: EPSCGFVAHFRV*DLSSEPQGTSL Trigger: CAGGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAAACCCACAGGAGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR CCA 72 bp | GGCAGCTCCCCACTGAACAATCTGCACCAAAAGGTGTaGAAGGCACAAACAAGAGTGGCCAGAGACCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GSSPLNNLHQKV*KAQTRVARDPA Trigger: TGCAGGGTCTCTGGCCACTCTTGTTTGTGCCTTCCACACCTTTTGGTGCAGATTGTTCAGTGGGGAGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| 3UTR TCA 72 bp | ACCACGAGCGTCCACGAGGCAGGCGCAGAAGTGACCTaGTTTGGTTCCTACCCTTTGATAAGAAAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: TTSVHEAGAEVT*FGSYPLIRKRA Trigger: GGCTCTCTTTCTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCTGCGCCTGCCTCGTGGACGCTCGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| 3UTR CCA 72 bp | GTGGTTTTCTTGGAAGGTCAGTGTGGAGAAGGGCTCTaGTTTGAGAAGCTTCCTGTGCAACGCCTCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: VVFLEGQCGEGL*FEKLPVQRLRV Trigger: GACTCTGAGGCGTTGCACAGGAAGCTTCTCAAACCAGAGCCCTTCTCCACACTGACCTTCCAAGAAAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| 3UTR TCA 72 bp | TTTCTTGGAAGGTCAGTGTGGAGAAGGGCTCTGGTTTaGGAAGCTTCCTGTGCAACGCCTCAGAGTCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: FLGRSVWRRALV*EASCATPQSQG Trigger: ACCTTGACTCTGAGGCGTTGCACAGGAAGCTTCTCAAACCAGAGCCCTTCTCCACACTGACCTTCCAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGTGGCAGGCTGCACAGGTAACTTCTGTCTGCCACCAACCTGGGCCGTCATGGAGGACGTCATaGGGAGGCGAGGGCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGWWQAAQVTSVCHQPGPSWRTS*GGEGSP Trigger: AGGCGAGCCCTCGCCTCCCCATGACGTCCTCCATGA...CGGCCCAGGTTGGTGGCAGACAGAAGTTACCTGTGCAGCCTGCCACCAGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACGGCGAGGCCTTCGCCTaGTCCTTGGCTACCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: SLRASLYRVSSRQAAHSHGEAFA*SLATRT Trigger: GGTGCGGGTAGCCAAGGAGCAGGCGAAGGCCTCGCC...GTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCAAGGTGGTCACCTCCGACCACCTCAGAGAAGAGGCCTTTGCTGATCCCGGCGAGGCCTTCGCCTaGTCCTTGGCTACCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: RVKVVTSDHLREEAFADPGEAFA*SLATRT Trigger: GGTGCGGGTAGCCAAGGAGCAGGCGAAGGCCTCGCC...GGGATCAGCAAAGGCCTCTTCTCTGAGGTGGTCGGAGGTGACCACCTTGACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR TCA 90 bp | GTCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACAGCAGGTCCTCCAGGATaGGCTGCAGCTCCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSESEPLQSVQQAGGSLTAGPPG*AAAPPR Trigger: ACGAGGAGGAGCTGCAGCTCATCCTGGAGGACCTGC...TGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGGCCACTCATCTGACAGTGAGAGCAGGTCCTCCAGGATaGGCTGCAGCTCCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: LSSEPQGTSLGATHLTVRAGPPG*AAAPPR Trigger: ACGAGGAGGAGCTGCAGCTCATCCTGGAGGACCTGC...TCTCACTGTCAGATGAGTGGCCCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCCTCCTGCGGCTGCTaGTCAGACTTGGCTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLRASLYRVSSRQAAHSHSSCGC*SDLARC Trigger: GCAGCGAGCCAAGTCTGAGCAGCAGCCGCAGGAGGA...GTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR GCA 90 bp | CGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGTAAGTCCTCCTGCGGCTGCTaGTCAGACTTGGCTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RAFTECPAGRRLTHTHSKSSCGC*SDLARC Trigger: GCAGCGAGCCAAGTCTGAGCAGCAGCCGCAGGAGGA...CTTACTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR CCA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATTCATGGAGGACGTCATaGGGAGGCGAGGGCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: ATWCREPQREPFWPVREYSWRTS*GGEGSP Trigger: AGGCGAGCCCTCGCCTCCCCATGACGTCCTCCATGA...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCAAGGTGGTCACCTCCGACCACCTCAGAGAAGAGGCCTTTGCTGATCCCACCCGATTGCTGATCTaGACGGTGGGGCTCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: RVKVVTSDHLREEAFADPTRLLI*TVGLST Trigger: AGTGCTGAGCCCCACCGTGCAGATCAGCAATCGGGT...GGGATCAGCAAAGGCCTCTTCTCTGAGGTGGTCGGAGGTGACCACCTTGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR GCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTCCTCCTGCGGCTGCTaGTCAGACTTGGCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLTLECGICLQSHRGPPSSCGC*SDLARC Trigger: GCAGCGAGCCAAGTCTGAGCAGCAGCCGCAGGAGGA...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCGCAGAAGTGACCTGATTTGGTTCCTACCCTTTGATAAGAAAGAGAGCGGCGAGGCCTTCGCCTaGTCCTTGGCTACCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRRRSDLIWFLPFDKKESGEAFA*SLATRT Trigger: GGTGCGGGTAGCCAAGGAGCAGGCGAAGGCCTCGCC...GCTCTCTTTCTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCTGCGCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTCATGGAGGACGTCATaGGGAGGCGAGGGCTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTLECGICLQSHRGPPSWRTS*GGEGSP Trigger: AGGCGAGCCCTCGCCTCCCCATGACGTCCTCCATGA...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAAGGTGGTCACCTCCGACCACCTCAGAGAAGAGGCCTTTGCTGATCCCCGCCTTCACACTTCATaGCGTGCTTCTCCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKVVTSDHLREEAFADPRLHTS*RASPCS Trigger: ACTACATGGAGAAGCACGGCATGAAGTGTGAAGGCG...GGGATCAGCAAAGGCCTCTTCTCTGAGGTGGTCGGAGGTGACCACCTTGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR GCA 90 bp | CGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGTAAGCGCCTTCACACTTCATaGCGTGCTTCTCCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAFTECPAGRRLTHTHSKRLHTS*RASPCS Trigger: ACTACATGGAGAAGCACGGCATGAAGTGTGAAGGCG...CTTACTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACAAGGTCTCGCAAATACTaGTTCAGCAAGCTGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSESEPLQSVQQAGGSLTRSRKY*FSKLAT Trigger: TGTAGCCAGCTTGCTGAAGCAGTATTTGCGAGACCT...TGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACCCGCTCCTCATGGACTaGTTGGTTCAAGTGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRASLYRVSSRQAAHSHPLLMD*LVQVIV Trigger: AACAATCACTTGAACCAAGCAGTCCATGAGGAGCGG...GTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACCGCTCCTCATGGACTaGTTGGTTCAAGTGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSESEPLQSVQQAGGSLTPLLMD*LVQVIV Trigger: AACAATCACTTGAACCAAGCAGTCCATGAGGAGCGG...TGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | CGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGTAAGAGGTCTCGCAAATACTaGTTCAGCAAGCTGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RAFTECPAGRRLTHTHSKRSRKY*FSKLAT Trigger: TGTAGCCAGCTTGCTGAAGCAGTATTTGCGAGACCT...CTTACTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATAGGTCTCGCAAATACTaGTTCAGCAAGCTGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ATWCREPQREPFWPVREYRSRKY*FSKLAT Trigger: TGTAGCCAGCTTGCTGAAGCAGTATTTGCGAGACCT...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATCCGCTCCTCATGGACTaGTTGGTTCAAGTGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATWCREPQREPFWPVREYPLLMD*LVQVIV Trigger: AACAATCACTTGAACCAAGCAGTCCATGAGGAGCGG...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR TCA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATCATCTACCTTTGATTTaGTTCCTGACACCCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATWCREPQREPFWPVREYHLPLI*FLTPGR Trigger: TCTACCGGGTGTCAGGAATCAAATCAAAGGTAGATG...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTCTGCGTGAGAGCATTTACATGGCTTATCCTGGCAGAGGTGTGTATCCTAACCCGATTGCTGATCTaGACGGTGGGGCTCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TFCVRAFTWLILAEVCILTRLLI*TVGLST Trigger: AGTGCTGAGCCCCACCGTGCAGATCAGCAATCGGGT...TAGGATACACACCTCTGCCAGGATAAGCCATGTAAATGCTCTCACGCAGAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| 3UTR CAA 72 bp | TTTTCTTGGAAGGTCAGTGTGGAGAAGGGCTCTGGTTaGAGAAGCTTCCTGTGCAACGCCTCAGAGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSWKVSVEKGSG*RSFLCNASESR Trigger: CCTTGACTCTGAGGCGTTGCACAGGAAGCTTCTCAAACCAGAGCCCTTCTCCACACTGACCTTCCAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR TCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCCATCTACCTTTGATTTaGTTCCTGACACCCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLTLECGICLQSHRGPPHLPLI*FLTPGR Trigger: TCTACCGGGTGTCAGGAATCAAATCAAAGGTAGATG...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CCA 90 bp | AGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGAGGATTTCATTCTCCTaGGCAAGAAGGATATTTATA | + |
|
Preference number: 4 (lower is better) Translates to: RASLYRVSSRQAAHSHSQRISFS*ARRIFI Trigger: TATAAATATCCTTCTTGCCCAGGAGAATGAAATCCT...CTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGCAGAAGTGACCTGATTTGGTTCCTACCCTTTGATAAGAAAGAGAGCCATCTACCTTTGATTTaGTTCCTGACACCCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRRSDLIWFLPFDKKESHLPLI*FLTPGR Trigger: TCTACCGGGTGTCAGGAATCAAATCAAAGGTAGATG...GCTCTCTTTCTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCTGCGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTTTAACAACATCAGCTaGTGTCAAGTCTTTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GFVAHFRVWDLSSEPQGTFNNIS*CQVFRF Trigger: AAATCGAAAGACTTGACAGCAGCTGATGTTGTTAAA...GGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR GCA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTTTAACAACATCAGCTaGTGTCAAGTCTTTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTLECGICLQSHRGPPFNNIS*CQVFRF Trigger: AAATCGAAAGACTTGACAGCAGCTGATGTTGTTAAA...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CCA 90 bp | GGGTTTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCAGGATTTCATTCTCCTaGGCAAGAAGGATATTTATA | + |
|
Preference number: 4 (lower is better) Translates to: GFVAHFRVWDLSSEPQGTRISFS*ARRIFI Trigger: TATAAATATCCTTCTTGCCCAGGAGAATGAAATCCT...GGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCGCAGAAGTGACCTGATTTGGTTCCTACCCTTTGATAAGAAAGAGAGCTTTAACAACATCAGCTaGTGTCAAGTCTTTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRRRSDLIWFLPFDKKESFNNIS*CQVFRF Trigger: AAATCGAAAGACTTGACAGCAGCTGATGTTGTTAAA...GCTCTCTTTCTTATCAAAGGGTAGGAACCAAATCAGGTCACTTCTGCGCCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| CDS CCA 90 bp | CTGCTCCTTGGCTACCCGCACCTCGAGGACACCGTCACAGGGCGGTaGGCCTATGCCCCCTCGCCTCTCGGGCTCCTCCTCCTCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLGYPHLEDTVTGR*AYAPSPLGLLLLLR Trigger: CCGCAGGAGGAGGAGGAGCCCGAGAGGCGAGGGGGCATAGGCCCACCGCCCTGTGACGGTGTCCTCGAGGTGCGGGTAGCCAAGGAGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGTGGCAGGCTGCACAGGTAACTTCTGTCTGCCACCAACCTGGGCCGTCCACGTACAGGACCCGATaGCTGATCTGCACGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWWQAAQVTSVCHQPGPSTYRTR*LICTVG Trigger: CCCCACCGTGCAGATCAGCAATCGGGTCCTGTACGT...GGACGGCCCAGGTTGGTGGCAGACAGAAGTTACCTGTGCAGCCTGCCACCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGGTCTCCTTCCGGTCTTaGCTGGGCGAGGCCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RASLYRVSSRQAAHSHSQVSFRS*LGEAFA Trigger: GGCGAAGGCCTCGCCCAGCAAAGACCGGAAGGAGAC...CTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR CAA 90 bp | CGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGTAAGGTCTCCTTCCGGTCTTaGCTGGGCGAGGCCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAFTECPAGRRLTHTHSKVSFRS*LGEAFA Trigger: GGCGAAGGCCTCGCCCAGCAAAGACCGGAAGGAGAC...CTTACTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS-3UTR CAA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATGTCTCCTTCCGGTCTTaGCTGGGCGAGGCCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATWCREPQREPFWPVREYVSFRS*LGEAFA Trigger: GGCGAAGGCCTCGCCCAGCAAAGACCGGAAGGAGAC...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGTGGCAGGCTGCACAGGTAACTTCTGTCTGCCACCAACCTGGGCCGTCCTCCCTCAGCTTTCTCTaGAGGGCAGTCAGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GWWQAAQVTSVCHQPGPSSLSFL*RAVRIL Trigger: GAGGATTCTGACTGCCCTCAAGAGAAAGCTGAGGGA...GGACGGCCCAGGTTGGTGGCAGACAGAAGTTACCTGTGCAGCCTGCCACCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CAA 90 bp | GCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGACGTACAGGACCCGATaGCTGATCTGCACGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHFRVWDLSSEPQGTSLGTYRTR*LICTVG Trigger: CCCCACCGTGCAGATCAGCAATCGGGTCCTGTACGT...CCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR CAA 90 bp | CAGGGCTGGGGAGACCACGAGCGTCCACGAGGCAGGCGCAGAAGTGACCTGATTTTGGACCTCTTCACCTaGGAAGGACTTTCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGWGDHERPRGRRRSDLILDLFT*EGLSAS Trigger: TGAAGCTGAAAGTCCTTCCAAGGTGAAGAGGTCCAA...AATCAGGTCACTTCTGCGCCTGCCTCGTGGACGCTCGTGGTCTCCCCAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATTCCCTCAGCTTTCTCTaGAGGGCAGTCAGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATWCREPQREPFWPVREYSLSFL*RAVRIL Trigger: GAGGATTCTGACTGCCCTCAAGAGAAAGCTGAGGGA...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
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| CDS-3UTR CAA 90 bp | ACGTTCTGCGTGAGAGCATTTACATGGCTTATCCTGGCAGAGGTGTGTATCCTAGTCTCCTTCCGGTCTTaGCTGGGCGAGGCCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TFCVRAFTWLILAEVCILVSFRS*LGEAFA Trigger: GGCGAAGGCCTCGCCCAGCAAAGACCGGAAGGAGAC...TAGGATACACACCTCTGCCAGGATAAGCCATGTAAATGCTCTCACGCAGAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCCTCATGGACTGCTaGGTTCAAGTGATTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSESEPLQSVQQAGGSLTLLMDC*VQVIVL Trigger: AAGAACAATCACTTGAACCAAGCAGTCCATGAGGAG...TGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGAGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACCTCCTCATGGACTGCTaGGTTCAAGTGATTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLRASLYRVSSRQAAHSHLLMDC*VQVIVL Trigger: AAGAACAATCACTTGAACCAAGCAGTCCATGAGGAG...GTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCTCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGCATATTCTTCTAAGTTaGGAGACTCCTCTCGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RASLYRVSSRQAAHSHSQHILLS*ETPLGH Trigger: ATGACCGAGAGGAGTCTCCAAACTTAGAAGAATATG...CTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATCTCCTCATGGACTGCTaGGTTCAAGTGATTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATWCREPQREPFWPVREYLLMDC*VQVIVL Trigger: AAGAACAATCACTTGAACCAAGCAGTCCATGAGGAG...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS CCA 90 bp | AAAAGGAACTCCTGCACGGTGGGGCTCAGCACTATAGAGATGTTCTaGATGTTCATCTTCGTTTCCAGCTCCTTCGCAATGACGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRNSCTVGLSTIEMF*MFIFVSSSFAMTWS Trigger: GGACCACGTCATTGCGAAGGAGCTGGAAACGAAGATGAACATCCAGAACATCTCTATAGTGCTGAGCCCCACCGTGCAGGAGTTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | GCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGTTCTTTCCATGGTCTTaGTCGTCATCTGACACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AHFRVWDLSSEPQGTSLGFFPWS*SSSDTV Trigger: TACAGTGTCAGATGACGACAAAGACCATGGAAAGAA...CCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CAA 90 bp | CGAGCCTTTACAGAGTGTCCAGCAGGCAGGCGGCTCACTCACACTCACAGTAAGTTCTTTCCATGGTCTTaGTCGTCATCTGACACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RAFTECPAGRRLTHTHSKFFPWS*SSSDTV Trigger: TACAGTGTCAGATGACGACAAAGACCATGGAAAGAA...CTTACTGTGAGTGTGAGTGAGCCGCCTGCCTGCTGGACACTCTGTAAAGGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTTGGACCTCTTCACCTaGGAAGGACTTTCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFVAHFRVWDLSSEPQGTLDLFT*EGLSAS Trigger: TGAAGCTGAAAGTCCTTCCAAGGTGAAGAGGTCCAA...GGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CAA 90 bp | GCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCTGGGGCATATTCTTCTAAGTTaGGAGACTCCTCTCGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHFRVWDLSSEPQGTSLGHILLS*ETPLGH Trigger: ATGACCGAGAGGAGTCTCCAAACTTAGAAGAATATG...CCCCAGGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
||
| CDS-3UTR CAA 90 bp | GCAACGTGGTGCAGGGAACCCCAGCGAGAGCCTTTCTGGCCAGTCAGAGAATATCATATTCTTCTAAGTTaGGAGACTCCTCTCGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ATWCREPQREPFWPVREYHILLS*ETPLGH Trigger: ATGACCGAGAGGAGTCTCCAAACTTAGAAGAATATG...ATATTCTCTGACTGGCCAGAAAGGCTCTCGCTGGGGTTCCCTGCACCACGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000233054.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCGCTCACTTTAGAGTGTGGGATTTGTCTTCAGAGCCACAGGGGACCTCCCCTCCTCATGGACTGCTaGGTTCAAGTGATTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTLECGICLQSHRGPPLLMDC*VQVIVL Trigger: AAGAACAATCACTTGAACCAAGCAGTCCATGAGGAG...GGGAGGTCCCCTGTGGCTCTGAAGACAAATCCCACACTCTAAAGTGAGCGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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| CDS-3UTR CAA 90 bp | AAAGTGGATGTTGTACACCGGACGGGATGCAGCAAGGCGTTTGTACATTTATATTTGGACCTCTTCACCTaGGAAGGACTTTCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KVDVVHRTGCSKAFVHLYLDLFT*EGLSAS Trigger: TGAAGCTGAAAGTCCTTCCAAGGTGAAGAGGTCCAA...ATATAAATGTACAAACGCCTTGCTGCATCCCGTCCGGTGTACAACATCCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024905.11 |
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| CDS CCA 72 bp | TCCGGTCTTTGCTGGGCGAGGCCTTCGCCTGCTCCTTaGCTACCCGCACCTCGAGGACACCGTCACAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SGLCWARPSPAP*LPAPRGHRHRA Trigger: CGCCCTGTGACGGTGTCCTCGAGGTGCGGGTAGCCAAGGAGCAGGCGAAGGCCTCGCCCAGCAAAGACCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS CAA 72 bp | TTCCGGTCTTTGCTGGGCGAGGCCTTCGCCTGCTCCTaGGCTACCCGCACCTCGAGGACACCGTCACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: FRSLLGEAFACS*ATRTSRTPSQG Trigger: GCCCTGTGACGGTGTCCTCGAGGTGCGGGTAGCCAAGGAGCAGGCGAAGGCCTCGCCCAGCAAAGACCGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS GCA 72 bp | GTCTCCTTCCGGTCTTTGCTGGGCGAGGCCTTCGCCTaGTCCTTGGCTACCCGCACCTCGAGGACACCGTCA | + |
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Preference number: 6 (lower is better) Translates to: VSFRSLLGEAFA*SLATRTSRTPS Trigger: TGACGGTGTCCTCGAGGTGCGGGTAGCCAAGGAGCAGGCGAAGGCCTCGCCCAGCAAAGACCGGAAGGAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 ENSMUST00000232848.2 ENSMUST00000233054.2 |
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| CDS CCA 72 bp | TCCTGCACGGTGGGGCTCAGCACTATAGAGATGTTCTaGATGTTCATCTTCGTTTCCAGCTCCTTCGCAATG | + |
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Preference number: 6 (lower is better) Translates to: SCTVGLSTIEMF*MFIFVSSSFAM Trigger: CATTGCGAAGGAGCTGGAAACGAAGATGAACATCCAGAACATCTCTATAGTGCTGAGCCCCACCGTGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233054.2 |
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| CDS CCA 72 bp | ATCTGCACGGTGGGGCTCAGCACTATAGAGATGTTCTaGATGTTCATCTTCGTTTCCAGCTCCTTCGCAATG | + |
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Preference number: 6 (lower is better) Translates to: ICTVGLSTIEMF*MFIFVSSSFAM Trigger: CATTGCGAAGGAGCTGGAAACGAAGATGAACATCCAGAACATCTCTATAGTGCTGAGCCCCACCGTGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024905.11 ENSMUST00000166543.10 |
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