Pregenerated sensors for RAI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043518Ensembl transcript IDs: ENSMUST00000061514.8, ENSMUST00000112338.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCATGATACTAGCTAATTaGCCTTTCTGCTCCCACCTA | + |
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Preference number: 3 (lower is better) Translates to: IIKALCGNENSSYPSDSPMILAN*PFCSHL Trigger: TAGGTGGGAGCAGAAAGGCAAATTAGCTAGTATCAT...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| 3UTR-3UTR CAA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATGATACTAGCTAATTaGCCTTTCTGCTCCCACCTA | + |
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Preference number: 3 (lower is better) Translates to: GITSSKHFVAMKIALTPLMILAN*PFCSHL Trigger: TAGGTGGGAGCAGAAAGGCAAATTAGCTAGTATCAT...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCCAAGGCACAGGGGCTaGAGCACGGTGGCTGCTACC | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPPRHRG*STVAAT Trigger: GGTAGCAGCCACCGTGCTGCAGCCCCTGTGCCTTGG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGAGGAGGCTGGCAGGGTaGAGGGCCCAGAGAGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLRRLAG*RAQRAL Trigger: CAAGGCTCTCTGGGCCCTCCACCCTGCCAGCCTCCT...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCCCTCCACCTGCATGTaGATGGGCATCACCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPPSTCM*MGITTG Trigger: CCCAGTGGTGATGCCCATTCACATGCAGGTGGAGGG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCCCAGGATGGCTGGGCTaGCTGACCATCTCAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFPGWLG*LTISVP Trigger: CGGCACTGAGATGGTCAGTCAGCCCAGCCATCCTGG...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCAGCCTTCAGCTCACTaGCAGGATGGCTGGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPQPSAH*QDGWAD Trigger: GTCAGCCCAGCCATCCTGGCAGTGAGCTGAAGGCTG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCGGGGCTGCAGCACGGTaGCTGCTACCTTCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFGAAAR*LLPSEP Trigger: TGGCTCTGAAGGTAGCAGCCACCGTGCTGCAGCCCC...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTAGGAGGCTGGCAGGGTaGAGGGCCCAGAGAGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSRRLAG*RAQRAL Trigger: CAAGGCTCTCTGGGCCCTCCACCCTGCCAGCCTCCT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCCCCTCCACCTGCATGTaGATGGGCATCACCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFPSTCM*MGITTG Trigger: CCCAGTGGTGATGCCCATTCACATGCAGGTGGAGGG...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTCCAGGATGGCTGGGCTaGCTGACCATCTCAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSPGWLG*LTISVP Trigger: CGGCACTGAGATGGTCAGTCAGCCCAGCCATCCTGG...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCCTGCAGCACGGTGGCTaGTACCTTCAGAGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFLQHGG*YLQSHA Trigger: GGCATGGCTCTGAAGGTAGCAGCCACCGTGCTGCAG...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGCTGCAGCACGGTGGCTaGTACCTTCAGAGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLLQHGG*YLQSHA Trigger: GGCATGGCTCTGAAGGTAGCAGCCACCGTGCTGCAG...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCTCCTGTGGCTGACTTaGGATCCTCAGGTCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPLLWLT*DPQVQE Trigger: CTCCTGGACCTGAGGATCCCAAGTCAGCCACAGGAG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCTTGAGCCAGGGCACTaGCTTCATGGACAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPLEPGH*LHGQIQ Trigger: CTGGATCTGTCCATGAAGTCAGTGCCCTGGCTCAAG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTCAGCCTTCAGCTCACTaGCAGGATGGCTGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSQPSAH*QDGWAD Trigger: GTCAGCCCAGCCATCCTGGCAGTGAGCTGAAGGCTG...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCCTCCTGTGGCTGACTTaGGATCCTCAGGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFLLWLT*DPQVQE Trigger: CTCCTGGACCTGAGGATCCCAAGTCAGCCACAGGAG...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCGATGGGCACTGGAACTaGCAAGGGGACAATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPDGHWN*QGDNHR Trigger: CCTGTGATTGTCCCCTTGCCAGTTCCAGTGCCCATC...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGGACAGGGATGGGGATaGGCACTGGAACTGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSGQGWG*ALELAR Trigger: CCTTGCCAGTTCCAGTGCCCATCCCCATCCCTGTCC...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGAGTACTCTGAGGCACTaGGACAGGGATGGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLSTLRH*DRDGDG Trigger: CCCATCCCCATCCCTGTCCCAGTGCCTCAGAGTACT...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCCCATCTCAGTGCCGTTaGTGTTGCTGCTGTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFPSQCR*CCCCGS Trigger: AGAGCCACAGCAGCAACAGCAACGGCACTGAGATGG...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAGGGGCTGCAGCACGGTaGCTGCTACCTTCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKGAAAR*LLPSEP Trigger: TGGCTCTGAAGGTAGCAGCCACCGTGCTGCAGCCCC...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTATTGGGGTTGAGCTCTaGCGCAGAGCTTCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSIGVEL*RRASLH Trigger: GTGGAGGGAAGCTCTGCGCCAGAGCTCAACCCCAAT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCGGGCCCAGAGAGCCTTaGGTGGGGAATAAATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFGPREP*VGNKFW Trigger: CCAGAATTTATTCCCCACCCAAGGCTCTCTGGGCCC...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCGGACTAGAGGGGAGTTaGGGTGCTGGAAAACATGCT | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFGLEGS*GAGKHA Trigger: AGCATGTTTTCCAGCACCTCAACTCCCCTCTAGTCC...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGGGACTAGAGGGGAGTTaGGGTGCTGGAAAACATGCT | + |
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Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLGLEGS*GAGKHA Trigger: AGCATGTTTTCCAGCACCTCAACTCCCCTCTAGTCC...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCTTTGGTGGATACCCCTaGGAGGCCTTTAATCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPFGGYP*EAFNLA Trigger: GGCAAGATTAAAGGCCTCTCAGGGGTATCCACCAAA...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTCTACCTTCAGAGCCATaGCACTCTGGGACTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSLPSEP*HSGTQL Trigger: CAGCTGAGTCCCAGAGTGGCATGGCTCTGAAGGTAG...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCCAGAGAGCCTTGGGTaGGGAATAAATTCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPPESLG*GINSGA Trigger: TGCTCCAGAATTTATTCCCCACCCAAGGCTCTCTGG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATGGGGATGGGCACTaGAACTGGCAAGGGGACAAT | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSDGDGH*NWQGDN Trigger: ATTGTCCCCTTGCCAGTTCCAGTGCCCATCCCCATC...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAGGACAGGGATGGGGATaGGCACTGGAACTGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: FILPFIRYYIIKALCGNEGQGWG*ALELAR Trigger: CCTTGCCAGTTCCAGTGCCCATCCCCATCCCTGTCC...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGGTGTGGCGGCTGAGCTaGAAATACTCCTTTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLVWRLS*KYSFDW Trigger: CCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACAC...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCAGGGCACTGACTTCATaGACAGATCCAGGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFRALTS*TDPGPH Trigger: ATGAGGCCCTGGATCTGTCCATGAAGTCAGTGCCCT...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTTTGGATTCAGTACTCTaGGGCACTGGGACAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSLDSVL*GTGTGM Trigger: CATCCCTGTCCCAGTGCCTCAGAGTACTGAATCCAA...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTCTTCAACTGACACAATaGCCTTGGCCGCCTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSLQLTQ*PWPPET Trigger: AGTCTCAGGCGGCCAAGGTCATTGTGTCAGTTGAAG...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR TCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCTTTGGTGGATACCCCTaGGAGGCCTTTAATCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFFGGYP*EAFNLA Trigger: GGCAAGATTAAAGGCCTCTCAGGGGTATCCACCAAA...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR GCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCGTGCCTTTAAAGGAGTaGAAGCCGAAGGAAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFVPLKE*KPKEDG Trigger: GCCATCTTCCTTCGGCTTGCACTCCTTTAAAGGCAC...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGCCAGAGAGCCTTGGGTaGGGAATAAATTCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLPESLG*GINSGA Trigger: TGCTCCAGAATTTATTCCCCACCCAAGGCTCTCTGG...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAAGTACTCTGAGGCACTaGGACAGGGATGGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKSTLRH*DRDGDG Trigger: CCCATCCCCATCCCTGTCCCAGTGCCTCAGAGTACT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGTGTGGCGGCTGAGCTaGAAATACTCCTTTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSVWRLS*KYSFDW Trigger: CCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACAC...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCATCTTGATGACTGTGTaGCGGCTGAGCTGGAAATAC | + |
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Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPILMTV*RLSWKY Trigger: GTATTTCCAGCTCAGCCGCCACACAGTCATCAAGAT...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGAGGCTTCAGAACACTTaGCAGGGGCAAAGGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLRLQNT*QGQRAF Trigger: AAATGCCCTTTGCCCCTGCCAAGTGTTCTGAAGCCT...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTTCTTGCCACAGAAGATaGCAGGCACGGCGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSSCHRR*QARRLQ Trigger: TTGAAGACGCCGTGCCTGCCATCTTCTGTGGCAAGA...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR TCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTTGGGGAAAGTGGGGCTaGACTTGGATTCAGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSWGKWG*TWIQYS Trigger: AGAGTACTGAATCCAAGTTCAGCCCCACTTTCCCCA...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR TCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAACTTGAGCCAGGGCACTaGCTTCATGGACAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKLEPGH*LHGQIQ Trigger: CTGGATCTGTCCATGAAGTCAGTGCCCTGGCTCAAG...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAACTACCTTCAGAGCCATaGCACTCTGGGACTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKLPSEP*HSGTQL Trigger: CAGCTGAGTCCCAGAGTGGCATGGCTCTGAAGGTAG...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAACCATCTCAGTGCCGTTaGTGTTGCTGCTGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKPSQCR*CCCCGS Trigger: AGAGCCACAGCAGCAACAGCAACGGCACTGAGATGG...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCTGGAAGAGGTTGTTGTaGATAGCATTGGAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFWKRLL*IALEEH Trigger: GTGCTCCTCCAATGCTATCCACAACAACCTCTTCCA...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAGGGCCCAGAGAGCCTTaGGTGGGGAATAAATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FILPFIRYYIIKALCGNEGPREP*VGNKFW Trigger: CCAGAATTTATTCCCCACCCAAGGCTCTCTGGGCCC...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCGATGGGCACTGGAACTaGCAAGGGGACAATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSDGHWN*QGDNHR Trigger: CCTGTGATTGTCCCCTTGCCAGTTCCAGTGCCCATC...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAGATGGGGATGGGCACTaGAACTGGCAAGGGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FILPFIRYYIIKALCGNEDGDGH*NWQGDN Trigger: ATTGTCCCCTTGCCAGTTCCAGTGCCCATCCCCATC...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCTTTTCCAGAGTGGTCTaGGTGCCTTTAAAGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFFSRVV*VPLKEC Trigger: GCACTCCTTTAAAGGCACCCAGACCACTCTGGAAAA...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTTGTGGCTCTCCATCATaGCTGAGGCTTCAGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSCGSPS*LRLQNT Trigger: AGTGTTCTGAAGCCTCAGCCATGATGGAGAGCCACA...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGAGGAGAAGTTTTTGGTaGATACCCCTGAGAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLRRSFW*IPLRGL Trigger: AAGGCCTCTCAGGGGTATCCACCAAAAACTTCTCCT...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCAGTCAGTCATGTCCATaGAAAGATTCTGGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFSQSCP*KDSGTA Trigger: TGCAGTCCCAGAATCTTTCCATGGACATGACTGACT...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTTGGAAGAGGTTGTTGTaGATAGCATTGGAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSWKRLL*IALEEH Trigger: GTGCTCCTCCAATGCTATCCACAACAACCTCTTCCA...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCGAGTCCTCAGCCCCCTaGAAGAGGTTGTTGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSESSAP*KRLLWI Trigger: TATCCACAACAACCTCTTCCAGGGGGCTGAGGACTC...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAAATACTCCTTTGACTaGAGGATGTCTAAGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPKYSFD*RMSKGF Trigger: GAAGCCCTTAGACATCCTCCAGTCAAAGGAGTATTT...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTATCTTGATGACTGTGTaGCGGCTGAGCTGGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSILMTV*RLSWKY Trigger: GTATTTCCAGCTCAGCCGCCACACAGTCATCAAGAT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAAGGGCACTGACTTCATaGACAGATCCAGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKRALTS*TDPGPH Trigger: ATGAGGCCCTGGATCTGTCCATGAAGTCAGTGCCCT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGGTTATACAATGTCTCTaGAGGAGCCTCAGCTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GITSSKHFVAMKIALTPLVIQCL*RSLSFS Trigger: CGAAAAGCTGAGGCTCCTCCAGAGACATTGTATAAC...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTGCCACAGAAGATaGCAGGCACGGCGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSSCHRR*QARRLQ Trigger: TTGAAGACGCCGTGCCTGCCATCTTCTGTGGCAAGA...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR TCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCATGACCTTGGCCGCCTaGGACTCACTTAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSMTLAA*DSLKIS Trigger: TGAGATCTTAAGTGAGTCTCAGGCGGCCAAGGTCAT...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR TCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATGACCTTGGCCGCCTaGGACTCACTTAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKMTLAA*DSLKIS Trigger: TGAGATCTTAAGTGAGTCTCAGGCGGCCAAGGTCAT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR TCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTCTTCTCCTTGGCTGTTaGTATCATAACCCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSLLLGC*YHNPEA Trigger: TGCTTCAGGGTTATGATATCAACAGCCAAGGAGAAG...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAAGAGGGGAGTTGAGGTaGTGGAAAACATGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKRGELR*WKTCCS Trigger: GGAACAGCATGTTTTCCAGCACCTCAACTCCCCTCT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAGTGCCTTTAAAGGAGTaGAAGCCGAAGGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKVPLKE*KPKEDG Trigger: GCCATCTTCCTTCGGCTTGCACTCCTTTAAAGGCAC...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR GCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTCAAAGGGCATTTCCATaGCACTGGAAAGTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSQRAFP*HWKVSP Trigger: TGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTG...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAGGGGAGTTGAGGTGCTaGAAAACATGCTGTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FILPFIRYYIIKALCGNEGELRC*KTCCSN Trigger: GTTGGAACAGCATGTTTTCCAGCACCTCAACTCCCC...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCGGGGAGTTGAGGTGCTaGAAAACATGCTGTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSGELRC*KTCCSN Trigger: GTTGGAACAGCATGTTTTCCAGCACCTCAACTCCCC...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCAAATACTCCTTTGACTaGAGGATGTCTAAGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHFVAMKIALTPLIHPIFKYSFD*RMSKGF Trigger: GAAGCCCTTAGACATCCTCCAGTCAAAGGAGTATTT...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGCATTTCCATGCCACTaGAAAGTTTCTCCAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RYYIIKALCGNENSSYPSAFPCH*KVSPVW Trigger: CCATACTGGAGAAACTTTCCAGTGGCATGGAAATGC...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCAGGCTTCAGAACACTTaGCAGGGGCAAAGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSRLQNT*QGQRAF Trigger: AAATGCCCTTTGCCCCTGCCAAGTGTTCTGAAGCCT...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTGTGGCTCTCCATCATaGCTGAGGCTTCAGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSCGSPS*LRLQNT Trigger: AGTGTTCTGAAGCCTCAGCCATGATGGAGAGCCACA...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAATTTTCCAGAGTGGTCTaGGTGCCTTTAAAGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKFSRVV*VPLKEC Trigger: GCACTCCTTTAAAGGCACCCAGACCACTCTGGAAAA...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAGGAGAAGTTTTTGGTaGATACCCCTGAGAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FILPFIRYYIIKALCGNERRSFW*IPLRGL Trigger: AAGGCCTCTCAGGGGTATCCACCAAAAACTTCTCCT...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAGCATGTGTATTTCCTaGGAGTTCACTTTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IIKALCGNENSSYPSDSPSMCIS*EFTFFN Trigger: GTTAAAGAAAGTGAACTCCCAGGAAATACACATGCT...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR TCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCCTTCTCCTTGGCTGTTaGTATCATAACCCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSLLLGC*YHNPEA Trigger: TGCTTCAGGGTTATGATATCAACAGCCAAGGAGAAG...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAACAAAGGGCATTTCCATaGCACTGGAAAGTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKQRAFP*HWKVSP Trigger: TGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTG...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAAGTCAGTCATGTCCATaGAAAGATTCTGGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKSQSCP*KDSGTA Trigger: TGCAGTCCCAGAATCTTTCCATGGACATGACTGACT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCGTTATACAATGTCTCTaGAGGAGCCTCAGCTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPFIRYYIIKALCGNENSVIQCL*RSLSFS Trigger: CGAAAAGCTGAGGCTCCTCCAGAGACATTGTATAAC...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAGCATTTCCATGCCACTaGAAAGTTTCTCCAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKAFPCH*KVSPVW Trigger: CCATACTGGAGAAACTTTCCAGTGGCATGGAAATGC...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAAGCATGTGTATTTCCTaGGAGTTCACTTTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPLLGITSSKHFVAMKSMCIS*EFTFFN Trigger: GTTAAAGAAAGTGAACTCCCAGGAAATACACATGCT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 90 bp | CATCTCAGTGCCGTTGCTGTTGCTGCTGTGGCTCTCCATCATGGCTaGGGCTTCAGAACACTTGGCAGGGGCAAAGGGCATTTCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLSAVAVAAVALHHG*GFRTLGRGKGHFHA Trigger: GGCATGGAAATGCCCTTTGCCCCTGCCAAGTGTTCTGAAGCCTCAGCCATGATGGAGAGCCACAGCAGCAACAGCAACGGCACTGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 90 bp | TGTTATTTTCAGCCTTCAGCTCACTGCCAGGATGGCTGGGCTGACTaGCCATCTCAGTGCCGTTGCTGTTGCTGCTGTGGCTCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CYFQPSAHCQDGWAD*PSQCRCCCCCGSPS Trigger: TGATGGAGAGCCACAGCAGCAACAGCAACGGCACTGAGATGGTCAGTCAGCCCAGCCATCCTGGCAGTGAGCTGAAGGCTGAAAATAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 90 bp | TCAATGTTATTTTCAGCCTTCAGCTCACTGCCAGGATGGCTGGGCTaGCTGACCATCTCAGTGCCGTTGCTGTTGCTGCTGTGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMLFSAFSSLPGWLG*LTISVPLLLLLWLS Trigger: GGAGAGCCACAGCAGCAACAGCAACGGCACTGAGATGGTCAGTCAGCCCAGCCATCCTGGCAGTGAGCTGAAGGCTGAAAATAACATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | ACCAGGTCAGTGGAGTTGATGTTCCAGGCCTCGGTAGTTATCAGCTaGGCCATGCGGTTCTCCAGTCTGTTATTAGCCAAAGTGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRSVELMFQASVVIS*AMRFSSLLLAKVGG Trigger: CCCTCCCACTTTGGCTAATAACAGACTGGAGAACCGCATGGCCCAGCTGATAACTACCGAGGCCTGGAACATCAACTCCACTGACCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS GCA 90 bp | TGGCTGAGGCTTCAGAACACTTGGCAGGGGCAAAGGGCATTTCCATaGCACTGGAAAGTTTCTCCAGTATGGTGTGACCCTGGATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLRLQNTWQGQRAFP*HWKVSPVWCDPGCL Trigger: CAGACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTGCCCCTGCCAAGTGTTCTGAAGCCTCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | TGGAGGATGTCTAAGGGCTTCAGTTCGTCCTTTTCCAGAGTGGTCTaGGTGCCTTTAAAGGAGTGCAAGCCGAAGGAAGATGGCGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WRMSKGFSSSFSRVV*VPLKECKPKEDGGL Trigger: CAAGCCGCCATCTTCCTTCGGCTTGCACTCCTTTAAAGGCACCCAGACCACTCTGGAAAAGGACGAACTGAAGCCCTTAGACATCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | AGGCTTCAGAACACTTGGCAGGGGCAAAGGGCATTTCCATGCCACTaGAAAGTTTCTCCAGTATGGTGTGACCCTGGATGTCTGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RLQNTWQGQRAFPCH*KVSPVWCDPGCLLT Trigger: GGTCAGCAGACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTGCCCCTGCCAAGTGTTCTGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | GCCTCATTCTCACTCCCCATCTTGATGACTGTGTGGCGGCTGAGCTaGAAATACTCCTTTGACTGGAGGATGTCTAAGGGCTTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASFSLPILMTVWRLS*KYSFDWRMSKGFSS Trigger: CGAACTGAAGCCCTTAGACATCCTCCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACACAGTCATCAAGATGGGGAGTGAGAATGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | GACAGATCCAGGGCCTCATTCTCACTCCCCATCTTGATGACTGTGTaGCGGCTGAGCTGGAAATACTCCTTTGACTGGAGGATGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRSRASFSLPILMTV*RLSWKYSFDWRMSK Trigger: CTTAGACATCCTCCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACACAGTCATCAAGATGGGGAGTGAGAATGAGGCCCTGGATCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 90 bp | GCCACTGGAAAGTTTCTCCAGTATGGTGTGACCCTGGATGTCTGCTaGCCCACTGTTGTTATACAATGTCTCTGGAGGAGCCTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ATGKFLQYGVTLDVC*PTVVIQCLWRSLSF Trigger: AAAGCTGAGGCTCCTCCAGAGACATTGTATAACAACAGTGGGTCAGCAGACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | ATCTTGATGACTGTGTGGCGGCTGAGCTGGAAATACTCCTTTGACTaGAGGATGTCTAAGGGCTTCAGTTCGTCCTTTTCCAGAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILMTVWRLSWKYSFD*RMSKGFSSSFSRVV Trigger: GACCACTCTGGAAAAGGACGAACTGAAGCCCTTAGACATCCTCCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACACAGTCATCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 90 bp | CAGGGGCAAAGGGCATTTCCATGCCACTGGAAAGTTTCTCCAGTATaGTGTGACCCTGGATGTCTGCTGACCCACTGTTGTTATACAATG | + |
|
Preference number: 5 (lower is better) Translates to: QGQRAFPCHWKVSPV*CDPGCLLTHCCYTM Trigger: CATTGTATAACAACAGTGGGTCAGCAGACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTGCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCGCTCCTGTGGCTGACTaGGGATCCTCAGGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IIKALCGNENSSYPSDSPAPVAD*GSSGPG Trigger: TCCTGGACCTGAGGATCCCAAGTCAGCCACAGGAGC...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAAGGAAGATGGCGGCTaGGGGAAAGTGGGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IIKALCGNENSSYPSDSPKEDGG*GKVGLN Trigger: GTTCAGCCCCACTTTCCCCAAGCCGCCATCTTCCTT...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 90 bp | GCAAAGGGCATTTCCATGCCACTGGAAAGTTTCTCCAGTATGGTGTaGCCCTGGATGTCTGCTGACCCACTGTTGTTATACAATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKGISMPLESFSSMV*PWMSADPLLLYNVS Trigger: AGAGACATTGTATAACAACAGTGGGTCAGCAGACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 90 bp | TCTTGCCACAGAAGATGGCAGGCACGGCGTCTTCAACTGACACAATaGCCTTGGCCGCCTGAGACTCACTTAAGATCTCAATGTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCHRRWQARRLQLTQ*PWPPETHLRSQCYF Trigger: AAAATAACATTGAGATCTTAAGTGAGTCTCAGGCGGCCAAGGTCATTGTGTCAGTTGAAGACGCCGTGCCTGCCATCTTCTGTGGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCAAGGAAGATGGCGGCTaGGGGAAAGTGGGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KHFVAMKIALTPLIHPIFKEDGG*GKVGLN Trigger: GTTCAGCCCCACTTTCCCCAAGCCGCCATCTTCCTT...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCTTCTCACTCCCCATCTaGATGACTGTGTGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IIKALCGNENSSYPSDSPFSLPI*MTVWRL Trigger: CAGCCGCCACACAGTCATCAAGATGGGGAGTGAGAA...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGACCATCTCAGTGCCGTaGCTGTTGCTGCTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GITSSKHFVAMKIALTPLTISVP*LLLLWL Trigger: GAGCCACAGCAGCAACAGCAACGGCACTGAGATGGT...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTTTGTTGTGGATAGCATaGGAGGAGCACGGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RYYIIKALCGNENSSYPSLLWIA*EEHGAS Trigger: GGAGGCCCCGTGCTCCTCCAATGCTATCCACAACAA...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTACCATCTCAGTGCCGTaGCTGTTGCTGCTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RYYIIKALCGNENSSYPSTISVP*LLLLWL Trigger: GAGCCACAGCAGCAACAGCAACGGCACTGAGATGGT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTACCAGGTCAGTGGAGTaGATGTTCCAGGCCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RYYIIKALCGNENSSYPSTRSVE*MFQASV Trigger: TACCGAGGCCTGGAACATCAACTCCACTGACCTGGT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGCCCCCTGGAAGAGGTaGTTGTGGATAGCATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RYYIIKALCGNENSSYPSAPWKR*LWIALE Trigger: CTCCAATGCTATCCACAACAACCTCTTCCAGGGGGC...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAGCTCCTGTGGCTGACTaGGGATCCTCAGGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FILPFIRYYIIKALCGNEAPVAD*GSSGPG Trigger: TCCTGGACCTGAGGATCCCAAGTCAGCCACAGGAGC...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTAGGACTAGAGGGGAGTaGAGGTGCTGGAAAACATGC | + |
|
Preference number: 5 (lower is better) Translates to: RYYIIKALCGNENSSYPSRTRGE*RCWKTC Trigger: GCATGTTTTCCAGCACCTCAACTCCCCTCTAGTCCT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | ATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCCAGGGACTCTTCTCCTaGGCTGTTGATATCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: IIKALCGNENSSYPSDSPQGLFS*AVDIIT Trigger: GGTTATGATATCAACAGCCAAGGAGAAGAGTCCCTG...GGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CAA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAACCAGGTCAGTGGAGTaGATGTTCCAGGCCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSYPLLGITSSKHFVAMKTRSVE*MFQASV Trigger: TACCGAGGCCTGGAACATCAACTCCACTGACCTGGT...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAGCCCCCTGGAAGAGGTaGTTGTGGATAGCATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FILPFIRYYIIKALCGNEAPWKR*LWIALE Trigger: CTCCAATGCTATCCACAACAACCTCTTCCAGGGGGC...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CAA 90 bp | GGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGGCTGGAAATACTCCTTaGACTGGAGGATGTCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GITSSKHFVAMKIALTPLAGNTP*TGGCLR Trigger: CCTTAGACATCCTCCAGTCAAAGGAGTATTTCCAGC...CAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAATTCTCACTCCCCATCTaGATGACTGTGTGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FILPFIRYYIIKALCGNEFSLPI*MTVWRL Trigger: CAGCCGCCACACAGTCATCAAGATGGGGAGTGAGAA...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CAA 90 bp | AAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTGATTCACCCAATATTCCAGGGACTCTTCTCCTaGGCTGTTGATATCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: KHFVAMKIALTPLIHPIFQGLFS*AVDIIT Trigger: GGTTATGATATCAACAGCCAAGGAGAAGAGTCCCTG...GAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS-3UTR CAA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCAGGACTAGAGGGGAGTaGAGGTGCTGGAAAACATGC | + |
|
Preference number: 5 (lower is better) Translates to: LPFIRYYIIKALCGNENSRTRGE*RCWKTC Trigger: GCATGTTTTCCAGCACCTCAACTCCCCTCTAGTCCT...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAACCCTGGAAGAGGTTGTaGTGGATAGCATTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FILPFIRYYIIKALCGNEPWKRL*WIALEE Trigger: CTCCTCCAATGCTATCCACAACAACCTCTTCCAGGG...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAGCTGGAAATACTCCTTaGACTGGAGGATGTCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSYPLLGITSSKHFVAMKAGNTP*TGGCLR Trigger: CCTTAGACATCCTCCAGTCAAAGGAGTATTTCCAGC...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAATTTATGCTCCGGTTTTaGATGGGTTTCCTAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSYPLLGITSSKHFVAMKFMLRF*MGFLRG Trigger: GCCCCTTAGGAAACCCATCAAAAACCGGAGCATAAA...TTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCCTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAATTTATGCTCCGGTTTTaGATGGGTTTCCTAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FILPFIRYYIIKALCGNEFMLRF*MGFLRG Trigger: GCCCCTTAGGAAACCCATCAAAAACCGGAGCATAAA...TTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAGGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCTCTTACCCCTCTACAGAGTCTTCTCTTTaGAAGGAGAAGTTTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RYYIIKALCGNENSSYPSTESSL*KEKFLV Trigger: CACCAAAAACTTCTCCTTCAAAAGAGAAGACTCTGT...AGAGGGGTAAGAGCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS-3UTR CAA 90 bp | CTACCCTTTATTAGGTATTACATCATCAAAGCACTTTGTGGCAATGAAAATAGCACAGAGTCTTCTCTTTaGAAGGAGAAGTTTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFIRYYIIKALCGNENSTESSL*KEKFLV Trigger: CACCAAAAACTTCTCCTTCAAAAGAGAAGACTCTGT...GCTATTTTCATTGCCACAAAGTGCTTTGATGATGTAATACCTAATAAAGGGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CAA 72 bp | GGCTGGGCCTCAGAGTCCTCAGCCCCCTGGAAGAGGTaGTTGTGGATAGCATTGGAGGAGCACGGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GWASESSAPWKR*LWIALEEHGAS Trigger: GGAGGCCCCGTGCTCCTCCAATGCTATCCACAACAACCTCTTCCAGGGGGCTGAGGACTCTGAGGCCCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 72 bp | GCCTCAGAGTCCTCAGCCCCCTGGAAGAGGTTGTTGTaGATAGCATTGGAGGAGCACGGGGCCTCCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASESSAPWKRLL*IALEEHGASCG Trigger: GCCACAGGAGGCCCCGTGCTCCTCCAATGCTATCCACAACAACCTCTTCCAGGGGGCTGAGGACTCTGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CAA 72 bp | TGGGCCTCAGAGTCCTCAGCCCCCTGGAAGAGGTTGTaGTGGATAGCATTGGAGGAGCACGGGGCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WASESSAPWKRL*WIALEEHGASC Trigger: ACAGGAGGCCCCGTGCTCCTCCAATGCTATCCACAACAACCTCTTCCAGGGGGCTGAGGACTCTGAGGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CAA 90 bp | GGGGCCGGAACGGTCACCAGGGCCTTCTTTACCAGGTCAGTGGAGTaGATGTTCCAGGCCTCGGTAGTTATCAGCTGGGCCATGCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GAGTVTRAFFTRSVE*MFQASVVISWAMRF Trigger: GAACCGCATGGCCCAGCTGATAACTACCGAGGCCTGGAACATCAACTCCACTGACCTGGTAAAGAAGGCCCTGGTGACCGTTCCGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 72 bp | CTGGAGCACAGCTTCAAAAGGCAATGCGGGCTCCTGTaGCTGACTTGGGATCCTCAGGTCCAGGAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LEHSFKRQCGLL*LTWDPQVQELR Trigger: CCTCAGCTCCTGGACCTGAGGATCCCAAGTCAGCCACAGGAGCCCGCATTGCCTTTTGAAGCTGTGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 72 bp | AGGCACTGGGACAGGGATGGGGATGGGCACTGGAACTaGCAAGGGGACAATCACAGGATAGGGCACCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RHWDRDGDGHWN*QGDNHRIGHQE Trigger: CTCTTGGTGCCCTATCCTGTGATTGTCCCCTTGCCAGTTCCAGTGCCCATCCCCATCCCTGTCCCAGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS TCA 72 bp | TTTTCAGCCTTCAGCTCACTGCCAGGATGGCTGGGCTaGCTGACCATCTCAGTGCCGTTGCTGTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSAFSSLPGWLG*LTISVPLLLLL Trigger: CAGCAGCAACAGCAACGGCACTGAGATGGTCAGTCAGCCCAGCCATCCTGGCAGTGAGCTGAAGGCTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 72 bp | GCCTCCTGTGGCAGGACTAGAGGGGAGTTGAGGTGCTaGAAAACATGCTGTTCCAACACCACTGGTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASCGRTRGELRC*KTCCSNTTGSC Trigger: GCAGCTACCAGTGGTGTTGGAACAGCATGTTTTCCAGCACCTCAACTCCCCTCTAGTCCTGCCACAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
||
| CDS CCA 72 bp | GGAGGGCCCAGAGAGCCTTGGGTGGGGAATAAATTCTaGAGCACAGCTTCAAAAGGCAATGCGGGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GGPREPWVGNKF*STASKGNAGSC Trigger: ACAGGAGCCCGCATTGCCTTTTGAAGCTGTGCTCCAGAATTTATTCCCCACCCAAGGCTCTCTGGGCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | AGTGGGGCTGAACTTGGATTCAGTACTCTGAGGCACTaGGACAGGGATGGGGATGGGCACTGGAACTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SGAELGFSTLRH*DRDGDGHWNWQ Trigger: TTGCCAGTTCCAGTGCCCATCCCCATCCCTGTCCCAGTGCCTCAGAGTACTGAATCCAAGTTCAGCCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | AGGGCCTCATTCTCACTCCCCATCTTGATGACTGTGTaGCGGCTGAGCTGGAAATACTCCTTTGACTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RASFSLPILMTV*RLSWKYSFDWR Trigger: CCTCCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACACAGTCATCAAGATGGGGAGTGAGAATGAGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 72 bp | CCTAAGGGGCTCGGCGTTTCCCAGGGACTCTTCTCCTaGGCTGTTGATATCATAACCCTGAAGCACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PKGLGVSQGLFS*AVDIITLKHRV Trigger: GACTCTGTGCTTCAGGGTTATGATATCAACAGCCAAGGAGAAGAGTCCCTGGGAAACGCCGAGCCCCTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 72 bp | CCTTTAAAGGAGTGCAAGCCGAAGGAAGATGGCGGCTaGGGGAAAGTGGGGCTGAACTTGGATTCAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: PLKECKPKEDGG*GKVGLNLDSVL Trigger: GAGTACTGAATCCAAGTTCAGCCCCACTTTCCCCAAGCCGCCATCTTCCTTCGGCTTGCACTCCTTTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 90 bp | ACTGACTTCATGGACAGATCCAGGGCCTCATTCTCACTCCCCATCTaGATGACTGTGTGGCGGCTGAGCTGGAAATACTCCTTTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: TDFMDRSRASFSLPI*MTVWRLSWKYSFDW Trigger: CCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACACAGTCATCAAGATGGGGAGTGAGAATGAGGCCCTGGATCTGTCCATGAAGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS TCA 72 bp | AGAAGATGGCAGGCACGGCGTCTTCAACTGACACAATaGCCTTGGCCGCCTGAGACTCACTTAAGATCTCAA | + |
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Preference number: 6 (lower is better) Translates to: RRWQARRLQLTQ*PWPPETHLRSQ Trigger: TTGAGATCTTAAGTGAGTCTCAGGCGGCCAAGGTCATTGTGTCAGTTGAAGACGCCGTGCCTGCCATCTTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS GCA 72 bp | CTTCAGAACACTTGGCAGGGGCAAAGGGCATTTCCATaGCACTGGAAAGTTTCTCCAGTATGGTGTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: LQNTWQGQRAFP*HWKVSPVWCDP Trigger: AGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTGCCCCTGCCAAGTGTTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | GTGGAGTTGATGTTCCAGGCCTCGGTAGTTATCAGCTaGGCCATGCGGTTCTCCAGTCTGTTATTAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VELMFQASVVIS*AMRFSSLLLAK Trigger: TTTGGCTAATAACAGACTGGAGAACCGCATGGCCCAGCTGATAACTACCGAGGCCTGGAACATCAACTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | ACTGTGTGGCGGCTGAGCTGGAAATACTCCTTTGACTaGAGGATGTCTAAGGGCTTCAGTTCGTCCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: TVWRLSWKYSFD*RMSKGFSSSFS Trigger: GGAAAAGGACGAACTGAAGCCCTTAGACATCCTCCAGTCAAAGGAGTATTTCCAGCTCAGCCGCCACACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | TTATACAATGTCTCTGGAGGAGCCTCAGCTTTTCGGTaGGCTGCCAAAGACAGATCTAGGGCTGCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LYNVSGGASAFR*AAKDRSRAASS Trigger: AGAGGATGCAGCCCTAGATCTGTCTTTGGCAGCCCACCGAAAAGCTGAGGCTCCTCCAGAGACATTGTATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | AACACTTGGCAGGGGCAAAGGGCATTTCCATGCCACTaGAAAGTTTCTCCAGTATGGTGTGACCCTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: NTWQGQRAFPCH*KVSPVWCDPGC Trigger: ACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAATGCCCTTTGCCCCTGCCAAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 90 bp | GATGGGTTTCCTAAGGGGCTCGGCGTTTCCCAGGGACTCTTCTCCTaGGCTGTTGATATCATAACCCTGAAGCACAGAGTCTTCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: DGFPKGLGVSQGLFS*AVDIITLKHRVFSF Trigger: AAAAGAGAAGACTCTGTGCTTCAGGGTTATGATATCAACAGCCAAGGAGAAGAGTCCCTGGGAAACGCCGAGCCCCTTAGGAAACCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS TCA 72 bp | GCTCGGCGTTTCCCAGGGACTCTTCTCCTTGGCTGTTaGTATCATAACCCTGAAGCACAGAGTCTTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ARRFPGTLLLGC*YHNPEAQSLLF Trigger: AAAGAGAAGACTCTGTGCTTCAGGGTTATGATATCAACAGCCAAGGAGAAGAGTCCCTGGGAAACGCCGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CCA 72 bp | TCTAAGGGCTTCAGTTCGTCCTTTTCCAGAGTGGTCTaGGTGCCTTTAAAGGAGTGCAAGCCGAAGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SKGFSSSFSRVV*VPLKECKPKED Trigger: ATCTTCCTTCGGCTTGCACTCCTTTAAAGGCACCCAGACCACTCTGGAAAAGGACGAACTGAAGCCCTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 72 bp | AAGTTTTTGGTGGATACCCCTGAGAGGCCTTTAATCTaGCCACAGAAGATGGCAGGCACGGCGTCTTCAACT | + |
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Preference number: 6 (lower is better) Translates to: KFLVDTPERPLI*PQKMAGTASST Trigger: AGTTGAAGACGCCGTGCCTGCCATCTTCTGTGGCAAGATTAAAGGCCTCTCAGGGGTATCCACCAAAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 90 bp | TTGAAGGAGAAGTTTTTGGTGGATACCCCTGAGAGGCCTTTAATCTaGCCACAGAAGATGGCAGGCACGGCGTCTTCAACTGACACAATG | + |
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Preference number: 6 (lower is better) Translates to: LKEKFLVDTPERPLI*PQKMAGTASSTDTM Trigger: CATTGTGTCAGTTGAAGACGCCGTGCCTGCCATCTTCTGTGGCAAGATTAAAGGCCTCTCAGGGGTATCCACCAAAAACTTCTCCTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS CAA 90 bp | TGTATTTCCTGGGAGTTCACTTTCTTTAACTTTATGCTCCGGTTTTaGATGGGTTTCCTAAGGGGCTCGGCGTTTCCCAGGGACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CISWEFTFFNFMLRF*MGFLRGSAFPRDSS Trigger: AGAAGAGTCCCTGGGAAACGCCGAGCCCCTTAGGAAACCCATCAAAAACCGGAGCATAAAGTTAAAGAAAGTGAACTCCCAGGAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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| CDS TCA 72 bp | ATTTCCATGCCACTGGAAAGTTTCTCCAGTATGGTGTaGCCCTGGATGTCTGCTGACCCACTGTTGTTATAC | + |
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Preference number: 6 (lower is better) Translates to: ISMPLESFSSMV*PWMSADPLLLY Trigger: GTATAACAACAGTGGGTCAGCAGACATCCAGGGTCACACCATACTGGAGAAACTTTCCAGTGGCATGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061514.8 ENSMUST00000112338.2 |
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