Pregenerated sensors for RAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000441Ensembl transcript IDs: ENSMUST00000000451.14, ENSMUST00000112949.8, ENSMUST00000147979.3, ENSMUST00000203142.2, ENSMUST00000203759.2
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTaGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LQIGLGRGPPHRGSS*KTDSARGRLPKVEH Trigger: GTGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
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| 3UTR GCA 90 bp | CCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTaGCAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PIGAAPGRQIQHVGG*QRWSTALGKPSTQD Trigger: GTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
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| 3UTR CCA 90 bp | GCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTaGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGAC | + |
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Preference number: 1 (lower is better) Translates to: AAPGRQIQHVGGCQR*STALGKPSTQDTLD Trigger: GTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR TCA 90 bp | GCTCGTACAGCACGATGCCGTACGAGTACACGTCGGACTGGAAGCTaGACGGGTTGTCATCCTGCATCCGGATTACTTCTGGGGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: ARTARCRTSTRRTGS*TGCHPASGLLLGPS Trigger: GGATGGCCCCAGAAGTAATCCGGATGCAGGATGACAACCCGTTCAGCTTCCAGTCCGACGTGTACTCGTACGGCATCGTGCTGTACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| 3UTR GCA 90 bp | GCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTaGACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCAATTGC | + |
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Preference number: 1 (lower is better) Translates to: AGSPRWPGLHVQNWH*TTVHIGSRSQVPNC Trigger: GCAATTGGGAACTTGGCTCCTTGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR GCA 90 bp | ATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTaGCCTACAAATACTCAGCTGACTTGTATACCTCTGGAGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: MSLQQPECPTFSKAT*PTNTQLTCIPLELS Trigger: GCTCAGCTCCAGAGGTATACAAGTCAGCTGAGTATTTGTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR CCA 90 bp | ACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCACCGCGCTTaGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: TDSARGRLPKVEHRA*KAIHTGHLRHSLST Trigger: TGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCGAAAGTGGTGCCTGCTaGCTCTTCTTCGTCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSESGAC*LFFVPW Trigger: CCAGGGGACGAAGAAGAGTCAGCAGGCACCACTTTC...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGGCAGGCTCCCCCAGGTaGCCAGGACTCCATGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PIGAAPGRQIQHVGGCQRAGSPR*PGLHVQ Trigger: TTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC...CCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR GCA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGGTGCAAAACTGGCACTaGACCACTGTCCATATAGGC | + |
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Preference number: 2 (lower is better) Translates to: RGPPHRGSSWKTDSARGRVQNWH*TTVHIG Trigger: GCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCAC...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCGTAGGGAAGCTCCCCAGCCATCAGCTCGTACAGCACGATGCCGTACGACATCCGGATTACTTCTaGGGCCATCCACAGCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: VGVGKLPSHQLVQHDAVRHPDYF*GHPQHR Trigger: TCTGTGCTGTGGATGGCCCCAGAAGTAATCCGGATG...TCGTACGGCATCGTGCTGTACGAGCTGATGGCTGGGGAGCTTCCCTACGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCCTGAGCAGGCTTTCTTaGTGGACAGCTTCCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: GAAPGRQIQHVGGCQRWSLSRLS*WTASIS Trigger: GGAAATGGAAGCTGTCCACCAAGAAAGCCTGCTCAG...GCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR CAA 90 bp | GTATTCCTGGCTTTCTTACAGACAAGGATGTGGCTACAGATAGGGTaGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: VFLAFLQTRMWLQIG*GRGPPHRGSSWKTD Trigger: ATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCTTGTCTGTAAGAAAGCCAGGAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGGTATACCTCTGGAGCTaGGCAGGCTTTCTTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: YQSRLPQVARTPCAKLALVYLWS*AGFLGG Trigger: TCCACCAAGAAAGCCTGCTCAGCTCCAGAGGTATAC...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR TCA 90 bp | ACGTCGGACTGGAAGCTGAACGGGTTGTCATCCTGCATCCGGATTACTTCTGGGGGCTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: TSDWKLNGLSSCIRITSGGCSTC*EPLQRD Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAGCC...CCCAGAAGTAATCCGGATGCAGGATGACAACCCGTTCAGCTTCCAGTCCGACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCATCAGCTCGTACAGCACGATGCCGTACGAGTACACGTCGGACTGGAAGCTACAGCACAGAGCCAGTaGGCTGTTCAACCTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SHQLVQHDAVRVHVGLEATAQSQ*AVQPAE Trigger: CTCAGCAGGTTGAACAGCCCACTGGCTCTGTGCTGT...AGCTTCCAGTCCGACGTGTACTCGTACGGCATCGTGCTGTACGAGCTGATGGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGGTGCAAAACTGGCACTaGACCACTGTCCATATAGGC | + |
|
Preference number: 2 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWVQNWH*TTVHIG Trigger: GCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCAC...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR CAA 90 bp | CACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTaGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HRAWKAIHTGHLRHS*STKFCSTKAGSPRW Trigger: CCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACGTATACCTCTGGAGCTaGGCAGGCTTTCTTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FCSTKAGSPRWPGLHVQNVYLWS*AGFLGG Trigger: TCCACCAAGAAAGCCTGCTCAGCTCCAGAGGTATAC...GTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTACTACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTCAAAAACATGCATTCTaGCCCCAAGGAAACAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: AGSPRWPGLHVQNWHCTTQKHAF*PQGNRK Trigger: CTTTCTGTTTCCTTGGGGGCAGAATGCATGTTTTTG...AGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR GCA 90 bp | ACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAGGCCAGGACTCCATGTaGAAAACTGGCACTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: TALGKPSTQDTLDTVCPQGQDSM*KTGTAP Trigger: TGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCC...TTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACCTGAGCAGGCTTTCTTaGTGGACAGCTTCCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: FCSTKAGSPRWPGLHVQNLSRLS*WTASIS Trigger: GGAAATGGAAGCTGTCCACCAAGAAAGCCTGCTCAG...GTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTACTACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR CAA 90 bp | CCCTACCTTCTCCAAGGCCACTTGCCCTACAAATACTCAGCTGACTaGTATACCTCTGGAGCTGAGCAGGCTTTCTTGGTGGACAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PYLLQGHLPYKYSAD*YTSGAEQAFLVDSF Trigger: GAAGCTGTCCACCAAGAAAGCCTGCTCAGCTCCAGAGGTATACAAGTCAGCTGAGTATTTGTAGGGCAAGTGGCCTTGGAGAAGGTAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCACAAGGAAACAGAAAGTaGTGCCTGCTGACTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: WPGLHVQNWHCTTVHIGSQGNRK*CLLTLL Trigger: AAGAAGAGTCAGCAGGCACCACTTTCTGTTTCCTTG...TGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACAAAAACATGCATTCTaGCCCCAAGGAAACAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVQKHAF*PQGNRK Trigger: CTTTCTGTTTCCTTGGGGGCAGAATGCATGTTTTTG...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR CCA 72 bp | GGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTaGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GLGRGPPHRGSS*KTDSARGRLPK Trigger: CTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
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| 3UTR GCA 72 bp | GCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTaGCAAAGGTGGAGCACCGCGCTTGGAAAGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: AAPGRQIQHVGG*QRWSTALGKPS Trigger: GGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
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| 3UTR CCA 72 bp | GGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTaGCACTGCACCACTGTCCATATAGGCTCAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GSPRWPGLHVQN*HCTTVHIGSRS Trigger: GCTCCTTGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR CCA 72 bp | GCACGTGGGAGGCTGCCAAAGGTGGAGCACCGCGCTTaGAAAGCCATCCACACAGGACACCTTAGACACAGT | + |
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Preference number: 3 (lower is better) Translates to: ARGRLPKVEHRA*KAIHTGHLRHS Trigger: ACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR TCA 72 bp | GCACGATGCCGTACGAGTACACGTCGGACTGGAAGCTaGACGGGTTGTCATCCTGCATCCGGATTACTTCTG | + |
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Preference number: 3 (lower is better) Translates to: ARCRTSTRRTGS*TGCHPASGLLL Trigger: CAGAAGTAATCCGGATGCAGGATGACAACCCGTTCAGCTTCCAGTCCGACGTGTACTCGTACGGCATCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| 3UTR GCA 72 bp | CAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTaGCCTACAAATACTCAGCTGACTTGTATACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: QQPECPTFSKAT*PTNTQLTCIPL Trigger: CAGAGGTATACAAGTCAGCTGAGTATTTGTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| 3UTR-3UTR CAA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCGCTGAGCAGGCTTTCTaGGTGGACAGCTTCCATTTC | + |
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Preference number: 3 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTAEQAF*VDSFHF Trigger: GAAATGGAAGCTGTCCACCAAGAAAGCCTGCTCAGC...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCAGCAGGCTCCCCCAGGTaGCCAGGACTCCATGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GLGRGPPHRGSSWKTDSAAGSPR*PGLHVQ Trigger: TTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC...TGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203759.2 |
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| CDS-3UTR CCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCCTGGGTCCCAGATCCTaGTGCCCGCTCTCTTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSLGPRS*CPLSLC Trigger: GCACAAAGAGAGCGGGCACCAGGATCTGGGACCCAG...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR TCA 90 bp | GGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCGAGCTTGCCATCATCTaGGGCCCGGCGCTGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: GAAPGRQIQHVGGCQRWSELAII*GPALIA Trigger: GGCTATCAGCGCCGGGCCTCAGATGATGGCAAGCTC...GCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR TCA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGGGACAGGGAACCTTCTaGGGAAGGGCTGGAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RGPPHRGSSWKTDSARGRGQGTF*GRAGGV Trigger: AACACCTCCAGCCCTTCCTCAGAAGGTTCCCTGTCC...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR TCA 90 bp | TGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGGGCTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: WLQIGLGRGPPHRGSSWKGCSTC*EPLQRD Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAGCC...CTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
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| CDS-3UTR TCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGCAGAGGCGCTCCTGTTaGTTTTCGGCAGAGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGQRRSC*FSAESA Trigger: AGCACTCTCTGCCGAAAATCAACAGGAGCGCCTCTG...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR GCA 90 bp | GCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCGCACAGCACTCTGGCTaGAGGCCTCTCACCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: AAHPIGAAPGRQIQHVGGAQHSG*RPLTFR Trigger: TCTGAAGGTGAGAGGCCTGCAGCCAGAGTGCTGTGC...GCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR GCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGTCAGGTTGTTTGGGCTaGTGGACAGGGCTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGSGCLG*WTGLKV Trigger: CACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGA...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR GCA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGTGCCCGCTCTCTTTGTaGTGGCACAGGGGTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RGPPHRGSSWKTDSARGRCPLSL*WHRGFG Trigger: CCCAAAACCCCTGTGCCAGCACAAAGAGAGCGGGCA...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR TCA 90 bp | GCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTCGTTCCTGAAGGCCTaGAGTTGCTCTGGAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: AAHPIGAAPGRQIQHVGGSFLKA*SCSGVG Trigger: CCCAACTCCAGAGCAACTTCAGGCCTTCAGGAACGA...GCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR TCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCCTGCCTTCACACCACTaGGTCACAATCGCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSLPSHH*VTIARL Trigger: CAACCTGGCGATTGTGACTCAGTGGTGTGAAGGCAG...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR TCA 90 bp | GGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACTGCCTTCACACCACTaGGTCACAATCGCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GLGRGPPHRGSSWKTDSALPSHH*VTIARL Trigger: CAACCTGGCGATTGTGACTCAGTGGTGTGAAGGCAG...TGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTTGATGTCCTCAGTGTaGGCTGCCCGATGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAHPIGAAPGRQIQHVGGLMSSV*AARCRE Trigger: TTCCCTGCATCGGGCAGCTCACACTGAGGACATCAA...GCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGTGCCCTTGTACACAGTaGCAAAGGAACCTGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGCPCTQ*QRNLTR Trigger: TCGGGTCAGGTTCCTTTGGCACTGTGTACAAGGGCA...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAGTCCTCAGTGTGAGCTaGCCGATGCAGGGAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPHRGSSWKTDSARGRLPVLSVS*PMQGRL Trigger: GAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGAC...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGGTTGACCTCTGCCTCTaGGACAGGGAACCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGPPHRGSSWKTDSARGRVDLCL*DREPSE Trigger: CTCAGAAGGTTCCCTGTCCCAGAGGCAGAGGTCAAC...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCACAGCACAGAGCCAGTaGGCTGTTCAACCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSTAQSQ*AVQPAE Trigger: CTCAGCAGGTTGAACAGCCCACTGGCTCTGTGCTGT...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGCACAGAGCCAGTaGGCTGTTCAACCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLQIGLGRGPPHRGSSWKTAQSQ*AVQPAE Trigger: CTCAGCAGGTTGAACAGCCCACTGGCTCTGTGCTGT...CTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
||
| CDS-3UTR CCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGGCTGAAGCAGCTCGATaGAAGACAGGATCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGAEAAR*KTGSGE Trigger: TTCCCCAGATCCTGTCTTCCATCGAGCTGCTTCAGC...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGGAGCTTGCCATCATCTaGGGCCCGGCGCTGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWELAII*GPALIA Trigger: GGCTATCAGCGCCGGGCCTCAGATGATGGCAAGCTC...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTACGGCTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HVPAAAGVPYLLQGHLPYGCSTC*EPLQRD Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAGCC...GTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTCTTGTAGAGCCTGCTaGGATCAGGGGATGCATACC | + |
|
Preference number: 4 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSSCRAC*DQGMHT Trigger: GGTATGCATCCCCTGATCTCAGCAGGCTCTACAAGA...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACTCAGCGTGCAAGCATTaGTGTCCTCAGTGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWAAAHPIGAAPGRQIQHSACKH*CPQCEL Trigger: CAGCTCACACTGAGGACATCAATGCTTGCACGCTGA...GTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCAGTCCTCAGTGTGAGCTaGCCGATGCAGGGAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLLEDRFSTWEAAKGGAVLSVS*PMQGRL Trigger: GAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGAC...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| 3UTR CAA 72 bp | GCTTTCTTACAGACAAGGATGTGGCTACAGATAGGGTaGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFLQTRMWLQIG*GRGPPHRGSSW Trigger: CCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCTTGTCTGTAAGAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
||
| CDS-3UTR TCA 90 bp | CATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTACTCGTTCCTGAAGGCCTaGAGTTGCTCTGGAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVPAAAGVPYLLQGHLPYSFLKA*SCSGVG Trigger: CCCAACTCCAGAGCAACTTCAGGCCTTCAGGAACGA...GTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | CCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGCAGCCACCTCGTTCCTaGAGGCCTGAAGTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIGAAPGRQIQHVGGCQRQPPRS*RPEVAL Trigger: CAGAGCAACTTCAGGCCTTCAGGAACGAGGTGGCTG...CCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGCGTAGGGAAGCTCCCCAGCCATCAGCTCGTACAGCACGATGCCGTACGACTGCCTTCACACCACTaGGTCACAATCGCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGVGKLPSHQLVQHDAVRLPSHH*VTIARL Trigger: CAACCTGGCGATTGTGACTCAGTGGTGTGAAGGCAG...TCGTACGGCATCGTGCTGTACGAGCTGATGGCTGGGGAGCTTCCCTACGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR TCA 90 bp | CCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGGGCTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PIGAAPGRQIQHVGGCQRGCSTC*EPLQRD Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAGCC...CCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTTTGATGTCCTCAGTGTaGGCTGCCCGATGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSPRWPGLHVQNWHCTTLMSSV*AARCRE Trigger: TTCCCTGCATCGGGCAGCTCACACTGAGGACATCAA...AGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCTGGGAAAGAAGGTGGTaGTGGGACTCCACTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GAAPGRQIQHVGGCQRWSWERRW*WDSTVT Trigger: GGTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCA...GCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGCATCTCCATGCCACTTaGCCTTGTACACAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLQIGLGRGPPHRGSSWKHLHAT*PCTQCQ Trigger: TTGGCACTGTGTACAAGGGCAAGTGGCATGGAGATG...CTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGGTTTGTAGAGACTGCTaGCTTCACACCACTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGVCRDC*LHTTES Trigger: TGACTCAGTGGTGTGAAGGCAGCAGTCTCTACAAAC...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCGTGCAAAACTGGCACTaGACCACTGTCCATATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAHPIGAAPGRQIQHVGGVQNWH*TTVHIG Trigger: GCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCAC...GCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203759.2 |
||
| CDS-3UTR TCA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAGTCCAAAGCCATTGCTaGTCGTCTTCCAAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPHRGSSWKTDSARGRLPVQSHC*SSSKLP Trigger: AGGGAGCTTGGAAGACGATCAGCAATGGCTTTGGAC...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGATTGGGAGTGGACGTTaGCCTCTGCCTCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: YQSRLPQVARTPCAKLALIGSGR*PLPLGQ Trigger: CTGTCCCAGAGGCAGAGGTCAACGTCCACTCCCAAT...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGCATGCAGGGTGGTGCTaGCCATGTGGACATTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWHAGWC*PCGHWE Trigger: CTCCCAATGTCCACATGGTCAGCACCACCCTGCATG...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCATGCAGGGTGGTGCTaGCCATGTGGACATTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YQSRLPQVARTPCAKLALHAGWC*PCGHWE Trigger: CTCCCAATGTCCACATGGTCAGCACCACCCTGCATG...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGAGGCTGATTCACTGTaGCTTCGAATTGCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWAAAHPIGAAPGRQIQHEADSL*LRIASS Trigger: TGAGGATGCAATTCGAAGTCACAGTGAATCAGCCTC...GTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCAGAGGCTGATTCACTGTaGCTTCGAATTGCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGRGPPHRGSSWKTDSAEADSL*LRIASS Trigger: TGAGGATGCAATTCGAAGTCACAGTGAATCAGCCTC...TGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGGGGTTTTGGGCTGTaGCCAGCCTGTTGGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWRGFGL*PACWTQ Trigger: CTGAGTCCAACAGGCTGGTCACAGCCCAAAACCCCT...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGCTCCAATTTTCACCGTaGGGCCTTCATGGAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGLQFSP*GLHGEI Trigger: TATTTCTCCATGAAGGCCTCACGGTGAAAATTGGAG...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
||
| CDS-3UTR GCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGGCACAGCACTCTGGCTaGAGGCCTCTCACCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YQSRLPQVARTPCAKLALAQHSG*RPLTFR Trigger: TCTGAAGGTGAGAGGCCTGCAGCCAGAGTGCTGTGC...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCATGGGAAAGAAGGTGGTaGTGGGACTCCACTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GQLLEDRFSTWEAAKGGAWERRW*WDSTVT Trigger: GGTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCA...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGATCCTGCTGTCCACATaGAGGGTGGTGCTGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: PIGAAPGRQIQHVGGCQRILLST*RVVLTM Trigger: CATGGTCAGCACCACCCTGCATGTGGACAGCAGGAT...CCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTACCATCCTCAATCATCCTaGTGTCCACATGCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVPAAAGVPYLLQGHLPYHPQSS*CPHAGW Trigger: CCACCCTGCATGTGGACAGCAGGATGATTGAGGATG...GTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCATCAGGTTGTTTGGGCTaGTGGACAGGGCTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLLEDRFSTWEAAKGGASGCLG*WTGLKV Trigger: CACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGA...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCATGCCCTTGTACACAGTaGCAAAGGAACCTGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHRGSSWKTDSARGRLPCPCTQ*QRNLTR Trigger: TCGGGTCAGGTTCCTTTGGCACTGTGTACAAGGGCA...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGACTGCAACATCTCCATaGCACTTGCCCTTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: RGPPHRGSSWKTDSARGRTATSP*HLPLYT Trigger: TGTGTACAAGGGCAAGTGGCATGGAGATGTTGCAGT...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTACTGTGGACATTGGGAGTaGACGTTGACCTCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVPAAAGVPYLLQGHLPYCGHWE*TLTSAS Trigger: AGAGGCAGAGGTCAACGTCCACTCCCAATGTCCACA...GTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCGCTGAAGCAGCTCGATaGAAGACAGGATCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAAPGRQIQHVGGCQRWSAEAAR*KTGSGE Trigger: TTCCCCAGATCCTGTCTTCCATCGAGCTGCTTCAGC...GCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCCTCCAATTTTCACCGTaGGGCCTTCATGGAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSLQFSP*GLHGEI Trigger: TATTTCTCCATGAAGGCCTCACGGTGAAAATTGGAG...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000203759.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGCAGAGGCGCTCCTGTTaGTTTTCGGCAGAGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWQRRSC*FSAESA Trigger: AGCACTCTCTGCCGAAAATCAACAGGAGCGCCTCTG...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGTTGACCACAGTCCTTTaGTTATTCGGCAAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GRGPPHRGSSWKTDSARGLTTVL*LFGKKT Trigger: GGTTTTCTTGCCGAATAAGCAAAGGACTGTGGTCAA...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGGAGAAGTCTGAACACTaGACAGCACTCTGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSSWKTDSARGRLPKVEEKSEH*TALWLQ Trigger: CTGCAGCCAGAGTGCTGTGCAGTGTTCAGACTTCTC...CTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGGTCCCAGATCCTGGTaGCCGCTCTCTTTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTGPRSW*PLSLCW Trigger: CCAGCACAAAGAGAGCGGGCACCAGGATCTGGGACC...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGGCCAGGACTCCATGTaGAAAACTGGCACTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HRGSSWKTDSARGRLPKVGQDSM*KTGTAP Trigger: TGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCC...CACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203759.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACACTGGGTCCCAGATCCTaGTGCCCGCTCTCTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTLGPRS*CPLSLC Trigger: GCACAAAGAGAGCGGGCACCAGGATCTGGGACCCAG...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGGGCCTGAAGTTGCTCTaGAGTTGGGTCAACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGSSWKTDSARGRLPKVEGLKLL*SWVNHL Trigger: AAGGTGGTTGACCCAACTCCAGAGCAACTTCAGGCC...CTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGACAGCACAGAGCCAGTaGGCTGTTCAACCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YQSRLPQVARTPCAKLALTAQSQ*AVQPAE Trigger: CTCAGCAGGTTGAACAGCCCACTGGCTCTGTGCTGT...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGCATCCGGATTACTTCTaGGGCCATCCACAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PIGAAPGRQIQHVGGCQRHPDYF*GHPQHR Trigger: TCTGTGCTGTGGATGGCCCCAGAAGTAATCCGGATG...CCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGGTCCAAAGCCATTGCTaGTCGTCTTCCAAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWVQSHC*SSSKLP Trigger: AGGGAGCTTGGAAGACGATCAGCAATGGCTTTGGAC...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAACAGCAAGAGCTGTCTaGTATTACTCCAGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PPHRGSSWKTDSARGRLPTARAV*YYSSPH Trigger: GTGTGGACTGGAGTAATATCAGACAGCTCTTGCTGT...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCACAGCAAGAGCTGTCTaGTATTACTCCAGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GAAPGRQIQHVGGCQRWSTARAV*YYSSPH Trigger: GTGTGGACTGGAGTAATATCAGACAGCTCTTGCTGT...GCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACGGACAGGGAACCTTCTaGGGAAGGGCTGGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSTKAGSPRWPGLHVQNGQGTF*GRAGGV Trigger: AACACCTCCAGCCCTTCCTCAGAAGGTTCCCTGTCC...GTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTACTACAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAATTGGGAGTGGACGTTaGCCTCTGCCTCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTIGSGR*PLPLGQ Trigger: CTGTCCCAGAGGCAGAGGTCAACGTCCACTCCCAAT...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAAGGGGTTTTGGGCTGTaGCCAGCCTGTTGGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTRGFGL*PACWTQ Trigger: CTGAGTCCAACAGGCTGGTCACAGCCCAAAACCCCT...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCGGACTGGAAGCTGAACGGGTTGTCATCCTGCATCCGGATTACTTCTGGGCAGCCACCTCGTTCCTaGAGGCCTGAAGTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDWKLNGLSSCIRITSGQPPRS*RPEVAL Trigger: CAGAGCAACTTCAGGCCTTCAGGAACGAGGTGGCTG...CCCAGAAGTAATCCGGATGCAGGATGACAACCCGTTCAGCTTCCAGTCCGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR TCA 90 bp | CATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGTCTTGTAGAGCCTGCTaGGATCAGGGGATGCATACC | + |
|
Preference number: 4 (lower is better) Translates to: HRGSSWKTDSARGRLPKVSCRAC*DQGMHT Trigger: GGTATGCATCCCCTGATCTCAGCAGGCTCTACAAGA...CACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACACTGTGACTTCGAATTaGATCCTCAATCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWAAAHPIGAAPGRQIQHTVTSN*ILNHPA Trigger: AGCAGGATGATTGAGGATGCAATTCGAAGTCACAGT...GTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACATGCCCGCTCTCTTTGTaGTGGCACAGGGGTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTCPLSL*WHRGFG Trigger: CCCAAAACCCCTGTGCCAGCACAAAGAGAGCGGGCA...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGTGTGGACATTGGGAGTaGACGTTGACCTCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWCGHWE*TLTSAS Trigger: AGAGGCAGAGGTCAACGTCCACTCCCAATGTCCACA...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACAAAGTTGTGAGTTGTaGGTGGAACATGATCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGRGPPHRGSSWKTDSAQSCEL*VEHDPK Trigger: TTTTGGATCATGTTCCACTCACAACTCACAACTTTG...TGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTGAGATCAGGGGATGCATACCCACGGCCTACCATGAAGATGATCTGGTCGTTCCTGAAGGCCTaGAGTTGCTCTGGAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSGDAYPRPTMKMIWSFLKA*SCSGVG Trigger: CCCAACTCCAGAGCAACTTCAGGCCTTCAGGAACGA...CCAGATCATCTTCATGGTAGGCCGTGGGTATGCATCCCCTGATCTCAGCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCACAGCCACCTCGTTCCTaGAGGCCTGAAGTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WPGLHVQNWHCTTVHIGSQPPRS*RPEVAL Trigger: CAGAGCAACTTCAGGCCTTCAGGAACGAGGTGGCTG...TGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTCTCCAATTTTCACCGTaGGGCCTTCATGGAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AGSPRWPGLHVQNWHCTTLQFSP*GLHGEI Trigger: TATTTCTCCATGAAGGCCTCACGGTGAAAATTGGAG...AGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCACTGGCACAGGGGTTTTaGGCTGTGACCAGCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WPGLHVQNWHCTTVHIGSLAQGF*AVTSLL Trigger: CAACAGGCTGGTCACAGCCCAAAACCCCTGTGCCAG...TGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCGATTTCATGTCTCTGTaGATGATGTTCTTTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSDFMSL*MMFFAC Trigger: GCATGCAAAGAACATCATCCACAGAGACATGAAATC...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| 3UTR CAA 72 bp | GCTGACTTGTATACCTCTGGAGCTGAGCAGGCTTTCTaGGTGGACAGCTTCCATTTCCAGGGCAGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLYTSGAEQAF*VDSFHFQGRRG Trigger: ACCCCTCCTGCCCTGGAAATGGAAGCTGTCCACCAAGAAAGCCTGCTCAGCTCCAGAGGTATACAAGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCATTTAGCAGGAACTTCTaGCAGATGTCACAGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPHRGSSWKTDSARGRLPFSRNF*QMSQNA Trigger: TGCATTCTGTGACATCTGTCAGAAGTTCCTGCTAAA...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACACATCCTCAATCATCCTaGTGTCCACATGCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTHPQSS*CPHAGW Trigger: CCACCCTGCATGTGGACAGCAGGATGATTGAGGATG...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCGGTCCCAGATCCTGGTaGCCGCTCTCTTTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLRHSLSTKFCSTKAGSPGPRSW*PLSLCW Trigger: CCAGCACAAAGAGAGCGGGCACCAGGATCTGGGACC...GGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGGTTTGTAGAGACTGCTaGCTTCACACCACTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQSRLPQVARTPCAKLALVCRDC*LHTTES Trigger: TGACTCAGTGGTGTGAAGGCAGCAGTCTCTACAAAC...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CGGGTTGTCATCCTGCATCCGGATTACTTCTGGGGCCATCCACAGCACAGAGCCGTTTGTAGAGACTGCTaGCTTCACACCACTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVVILHPDYFWGHPQHRAVCRDC*LHTTES Trigger: TGACTCAGTGGTGTGAAGGCAGCAGTCTCTACAAAC...GGCTCTGTGCTGTGGATGGCCCCAGAAGTAATCCGGATGCAGGATGACAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR CCA 90 bp | CATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTACACAGCATCACCTCACTaGCTTCTATTTCCCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HVPAAAGVPYLLQGHLPYTASPH*LLFPSN Trigger: ATTACTGGGAAATAGAAGCCAGTGAGGTGATGCTGT...GTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAACAGCATCACCTCACTaGCTTCTATTTCCCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPHRGSSWKTDSARGRLPTASPH*LLFPSN Trigger: ATTACTGGGAAATAGAAGCCAGTGAGGTGATGCTGT...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCGGACTGGAAGCTGAACGGGTTGTCATCCTGCATCCGGATTACTTCTGGGGGCCTGAAGTTGCTCTaGAGTTGGGTCAACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSDWKLNGLSSCIRITSGGLKLL*SWVNHL Trigger: AAGGTGGTTGACCCAACTCCAGAGCAACTTCAGGCC...CCCAGAAGTAATCCGGATGCAGGATGACAACCCGTTCAGCTTCCAGTCCGACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTACAGATGTCACAGAATaGAAGCTTCAGGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSPRWPGLHVQNWHCTTTDVTE*KLQERF Trigger: AAAACGTTCCTGAAGCTTGCATTCTGTGACATCTGT...AGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGTCGCATCCGACGCATTaGGAAAGAAGGTGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHSLSTKFCSTKAGSPRWSHPTH*ERRWCW Trigger: CCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGA...CCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAGTTGACCTCTGCCTCTaGGACAGGGAACCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TALGKPSTQDTLDTVCPQVDLCL*DREPSE Trigger: CTCAGAAGGTTCCCTGTCCCAGAGGCAGAGGTCAAC...TTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | CATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGACTGTGACTTCGAATTaGATCCTCAATCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRGSSWKTDSARGRLPKVTVTSN*ILNHPA Trigger: AGCAGGATGATTGAGGATGCAATTCGAAGTCACAGT...CACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGTTACCTTTGTGTTCCTaGAGAAGTCTGAACACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQSRLPQVARTPCAKLALLPLCS*RSLNTA Trigger: TGCAGTGTTCAGACTTCTCCAGGAACACAAAGGTAA...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGACCAACAGTGGAATTTaGAAACAGCAAGAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRGSSWKTDSARGRLPKVTNSGI*KQQELS Trigger: AGACAGCTCTTGCTGTTTCCAAATTCCACTGTTGGT...CACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGCACTGTCACCAACAGTaGAATTTGGAAACAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWHCHQQ*NLETAR Trigger: TCTTGCTGTTTCCAAATTCCACTGTTGGTGACAGTG...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCGGTTGTTTGGGCTGCTaGACAGGGCTGAAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTGCLGC*TGLKVR Trigger: CCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACC...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCATCCTGCTGTCCACATaGAGGGTGGTGCTGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTILLST*RVVLTM Trigger: CATGGTCAGCACCACCCTGCATGTGGACAGCAGGAT...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTTGTCATCCTGCATCCGGATTACTTCTGGGGCCATCCACAGCACAGAGCCGATTTCATGTCTCTGTaGATGATGTTCTTTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RVVILHPDYFWGHPQHRADFMSL*MMFFAC Trigger: GCATGCAAAGAACATCATCCACAGAGACATGAAATC...GGCTCTGTGCTGTGGATGGCCCCAGAAGTAATCCGGATGCAGGATGACAACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCCATCCGGATTACTTCTaGGGCCATCCACAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLRHSLSTKFCSTKAGSPHPDYF*GHPQHR Trigger: TCTGTGCTGTGGATGGCCCCAGAAGTAATCCGGATG...GGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| 3UTR CAA 72 bp | CTCCAAGGCCACTTGCCCTACAAATACTCAGCTGACTaGTATACCTCTGGAGCTGAGCAGGCTTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQGHLPYKYSAD*YTSGAEQAFLV Trigger: CACCAAGAAAGCCTGCTCAGCTCCAGAGGTATACAAGTCAGCTGAGTATTTGTAGGGCAAGTGGCCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCTCAGCGTGCAAGCATTaGTGTCCTCAGTGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTSACKH*CPQCEL Trigger: CAGCTCACACTGAGGACATCAATGCTTGCACGCTGA...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | ACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAACTGCAACATCTCCATaGCACTTGCCCTTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: TALGKPSTQDTLDTVCPQTATSP*HLPLYT Trigger: TGTGTACAAGGGCAAGTGGCATGGAGATGTTGCAGT...TTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAACCAACAGTGGAATTTaGAAACAGCAAGAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRWSTALGKPSTQDTLDTTNSGI*KQQELS Trigger: AGACAGCTCTTGCTGTTTCCAAATTCCACTGTTGGT...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTAGGTTGTTTGGGCTGCTaGACAGGGCTGAAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVGCLGC*TGLKVR Trigger: CCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACC...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACTGGCACAGGGGTTTTaGGCTGTGACCAGCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVLAQGF*AVTSLL Trigger: CAACAGGCTGGTCACAGCCCAAAACCCCTGTGCCAG...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCATTACCTTTGTGTTCCTaGAGAAGTCTGAACACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPGLHVQNWHCTTVHIGSLPLCS*RSLNTA Trigger: TGCAGTGTTCAGACTTCTCCAGGAACACAAAGGTAA...TGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTATCGCATCCGACGCATTaGGAAAGAAGGTGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVSHPTH*ERRWCW Trigger: CCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGA...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| 3UTR CAA 72 bp | TGGAAAGCCATCCACACAGGACACCTTAGACACAGTTaGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKAIHTGHLRHS*STKFCSTKAGS Trigger: GGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTAGGCCTGAAGTTGCTCTaGAGTTGGGTCAACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVGLKLL*SWVNHL Trigger: AAGGTGGTTGACCCAACTCCAGAGCAACTTCAGGCC...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTGAGATCAGGGGATGCATACCCACGGCCTACCATGAAGATGATCTGGTTGTTAAGGAGATGTTaGATTTCATGTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSGDAYPRPTMKMIWLLRRC*ISCLCG Trigger: TCCACAGAGACATGAAATCCAACATCTCCTTAACAA...CCAGATCATCTTCATGGTAGGCCGTGGGTATGCATCCCCTGATCTCAGCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCTTGACCACAGTCCTTTaGTTATTCGGCAAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HLRHSLSTKFCSTKAGSPLTTVL*LFGKKT Trigger: GGTTTTCTTGCCGAATAAGCAAAGGACTGTGGTCAA...GGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | ACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAACAGATGTCACAGAATaGAAGCTTCAGGAACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TALGKPSTQDTLDTVCPQTDVTE*KLQERF Trigger: AAAACGTTCCTGAAGCTTGCATTCTGTGACATCTGT...TTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACATCTCCATGCCACTTaGCCTTGTACACAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVHLHAT*PCTQCQ Trigger: TTGGCACTGTGTACAAGGGCAAGTGGCATGGAGATG...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR TCA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCTTTAGCAGGAACTTCTaGCAGATGTCACAGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTFSRNF*QMSQNA Trigger: TGCATTCTGTGACATCTGTCAGAAGTTCCTGCTAAA...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CCA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCGATTTCATGTCTCTGTaGATGATGTTCTTTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTDFMSL*MMFFAC Trigger: GCATGCAAAGAACATCATCCACAGAGACATGAAATC...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGTGGTGCCCGCTCTCTTaGTGCTGGCACAGGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGPPHRGSSWKTDSARGWCPLS*CWHRGF Trigger: AAAACCCCTGTGCCAGCACAAAGAGAGCGGGCACCA...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | AGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCCATTGGGAGTGGACGTaGACCTCTGCCTCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RMWLQIGLGRGPPHRGSSHWEWT*TSASGT Trigger: TGTCCCAGAGGCAGAGGTCAACGTCCACTCCCAATG...GGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGTGGTGCCCGCTCTCTTaGTGCTGGCACAGGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WAAAHPIGAAPGRQIQHVWCPLS*CWHRGF Trigger: AAAACCCCTGTGCCAGCACAAAGAGAGCGGGCACCA...CACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGACATCTCCATGCCACTaGCCCTTGTACACAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGPPHRGSSWKTDSARGTSPCH*PLYTVP Trigger: TGGCACTGTGTACAAGGGCAAGTGGCATGGAGATGT...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCCTGAAGGCCTGAAGTaGCTCTGGAGTTGGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RGPPHRGSSWKTDSARGRPEGLK*LWSWVN Trigger: GTTGACCCAACTCCAGAGCAACTTCAGGCCTTCAGG...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGGTCACAATCGCCAGGTaGTCCTTTGTCATGTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGPPHRGSSWKTDSARGVTIAR*SFVMYP Trigger: GGGGTACATGACAAAGGACAACCTGGCGATTGTGAC...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCCATTGGGAGTGGACGTaGACCTCTGCCTCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GAAPGRQIQHVGGCQRWSHWEWT*TSASGT Trigger: TGTCCCAGAGGCAGAGGTCAACGTCCACTCCCAATG...GCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGTCAAACACCGCATCTTaGAGTCCAAAGCCATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGPPHRGSSWKTDSARGSNTAS*SPKPLL Trigger: CAGCAATGGCTTTGGACTCAAAGATGCGGTGTTTGA...CCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCAGAAGAATCCGTGAGCTaGCCATCATCTGAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLLEDRFSTWEAAKGGAEESVS*PSSEAR Trigger: CCGGGCCTCAGATGATGGCAAGCTCACGGATTCTTC...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCACTCGCATCCGACGCATaGGGAAAGAAGGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLLEDRFSTWEAAKGGALASDA*GKKVVL Trigger: CAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAG...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGTTGGACTCAGGTTGTTaGGGCTGCTGGACAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGSSWKTDSARGRLPKVELDSGC*GCWTGL Trigger: CAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAA...CTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGTTGAGTCCAAAGCCATaGCTGATCGTCTTCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGPPHRGSSWKTDSARGRLSPKP*LIVFQA Trigger: AGCTTGGAAGACGATCAGCAATGGCTTTGGACTCAA...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCAGAAGGGCTGGAGGTGTaGAAAGTGAAGGCATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQLLEDRFSTWEAAKGGAEGLEV*KVKAWG Trigger: ACCCCATGCCTTCACTTTCAACACCTCCAGCCCTTC...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS TCA 90 bp | CAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTaGTTTTCGGCAGAGAGTGCTGAAGCAGCTCGATGGAAGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QCELPDAGKAQRRSC*FSAESAEAARWKTG Trigger: TCCTGTCTTCCATCGAGCTGCTTCAGCACTCTCTGCCGAAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS TCA 90 bp | AGCCTTGGGGATGTAGTCAGCGTGCAAGCATTGATGTCCTCAGTGTaGGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLGDVVSVQALMSSV*AARCREGSEALLLI Trigger: AATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGACATCAATGCTTGCACGCTGACTACATCCCCAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS GCA 90 bp | TGGGGATGTAGTCAGCGTGCAAGCATTGATGTCCTCAGTGTGAGCTaGCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WGCSQRASIDVLSVS*PMQGRLRGAPVDFR Trigger: CCGAAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGACATCAATGCTTGCACGCTGACTACATCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCATTGAGTCCAAAGCCATaGCTGATCGTCTTCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPHRGSSWKTDSARGRLPLSPKP*LIVFQA Trigger: AGCTTGGAAGACGATCAGCAATGGCTTTGGACTCAA...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCATTGACCACAGTCCTTaGCTTATTCGGCAAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAHPIGAAPGRQIQHVGGIDHSP*LIRQEN Trigger: GTTTTCTTGCCGAATAAGCAAAGGACTGTGGTCAAT...GCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCACGTGCTTTCTTACCTTaGTGTTCCTGGAGAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPHRGSSWKTDSARGRLPRAFLP*CSWRSL Trigger: CAGACTTCTCCAGGAACACAAAGGTAAGAAAGCACG...TGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGCTGTGACCAGCCTGTaGGACTCAGGTTGTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRWSTALGKPSTQDTLDTAVTSL*DSGCLG Trigger: GCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGC...TGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTGCTCCACCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | TACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGACATCTCCATGCCACTaGCCCTTGTACACAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YQSRLPQVARTPCAKLALTSPCH*PLYTVP Trigger: TGGCACTGTGTACAAGGGCAAGTGGCATGGAGATGT...CAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS GCA 90 bp | GGGTTTTGGGCTGTGACCAGCCTGTTGGACTCAGGTTGTTTGGGCTaGTGGACAGGGCTGAAGGTGAGGCTGATTCACTGTGACTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFWAVTSLLDSGCLG*WTGLKVRLIHCDFE Trigger: TTCGAAGTCACAGTGAATCAGCCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGCCCAAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
||
| CDS CCA 90 bp | GGAACTAGCAGGCATCCGGGAAACAGATTCTCGCATCCGACGCATTaGGAAAGAAGGTGGTGCTGGGACTCCACTGTCACCAACAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTSRHPGNRFSHPTH*ERRWCWDSTVTNSG Trigger: TCCACTGTTGGTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAGAATCTGTTTCCCGGATGCCTGCTAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCATCAAACACCGCATCTTaGAGTCCAAAGCCATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLLEDRFSTWEAAKGGASNTAS*SPKPLL Trigger: CAGCAATGGCTTTGGACTCAAAGATGCGGTGTTTGA...TGCTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCAAAAACCCGGATAGTATaGCTTGTCTTAGAAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGRGPPHRGSSWKTDSAKTRIV*LVLEES Trigger: GGATTCTTCTAAGACAAGCAATACTATCCGGGTTTT...TGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | ACGTCGGACTGGAAGCTGAACGGGTTGTCATCCTGCATCCGGATTACTTCTGGGCCTGAAGGCCTGAAGTaGCTCTGGAGTTGGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSDWKLNGLSSCIRITSGPEGLK*LWSWVN Trigger: GTTGACCCAACTCCAGAGCAACTTCAGGCCTTCAGG...CCCAGAAGTAATCCGGATGCAGGATGACAACCCGTTCAGCTTCCAGTCCGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
||
| CDS-3UTR CAA 90 bp | CGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGAAAGGTCTCTCTTCTTaGACTTTCTTCACACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGPPHRGSSWKTDSARGRKGLSS*TFFTQS Trigger: TGACTGTGTGAAGAAAGTCAAAGAAGAGAGACCTTT...CCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS TCA 90 bp | AGGGAAGGCTCAGAGGCGCTCCTGTTGATTTTCGGCAGAGAGTGCTaGAGCAGCTCGATGGAAGACAGGATCTGGGGAAACAAAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: REGSEALLLIFGREC*SSSMEDRIWGNKGL Trigger: GAGACCTTTGTTTCCCCAGATCCTGTCTTCCATCGAGCTGCTTCAGCACTCTCTGCCGAAAATCAACAGGAGCGCCTCTGAGCCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS GCA 90 bp | GGGCTGGAGGTGTTGAAAGTGAAGGCATGGGGTGTAGAGTATCTGTaGTGGGAACTAGCAGGCATCCGGGAAACAGATTCTCGCATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLEVLKVKAWGVEYL*WELAGIRETDSRIR Trigger: TCGGATGCGAGAATCTGTTTCCCGGATGCCTGCTAGTTCCCAGCACAGATACTCTACACCCCATGCCTTCACTTTCAACACCTCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CCA 90 bp | CTGGAGGTGTTGAAAGTGAAGGCATGGGGTGTAGAGTATCTGTGCTaGGAACTAGCAGGCATCCGGGAAACAGATTCTCGCATCCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: LEVLKVKAWGVEYLC*ELAGIRETDSRIRR Trigger: GCGTCGGATGCGAGAATCTGTTTCCCGGATGCCTGCTAGTTCCCAGCACAGATACTCTACACCCCATGCCTTCACTTTCAACACCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS-3UTR CAA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGCACCAACAGTGGAATTaGGAAACAGCAAGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWHQQWN*ETARAV Trigger: GACAGCTCTTGCTGTTTCCAAATTCCACTGTTGGTG...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | AGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCTCGCATCCGACGCATaGGGAAAGAAGGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHSLSTKFCSTKAGSPRWLASDA*GKKVVL Trigger: CAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAG...CCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | AGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGGCTGTGACCAGCCTGTaGGACTCAGGTTGTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHSLSTKFCSTKAGSPRWAVTSL*DSGCLG Trigger: GCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGC...CCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGCCTGAAGGCCTGAAGTaGCTCTGGAGTTGGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARTPCAKLALHHCPYRLKPEGLK*LWSWVN Trigger: GTTGACCCAACTCCAGAGCAACTTCAGGCCTTCAGG...CTTGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | TTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACGTCACAATCGCCAGGTaGTCCTTTGTCATGTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSTKAGSPRWPGLHVQNVTIAR*SFVMYP Trigger: GGGGTACATGACAAAGGACAACCTGGCGATTGTGAC...GTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTACTACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | AGCCTGCTGAGATCAGGGGATGCATACCCACGGCCTACCATGAAGATGATCTGGGTCACAATCGCCAGGTaGTCCTTTGTCATGTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLRSGDAYPRPTMKMIWVTIAR*SFVMYP Trigger: GGGGTACATGACAAAGGACAACCTGGCGATTGTGAC...CCAGATCATCTTCATGGTAGGCCGTGGGTATGCATCCCCTGATCTCAGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| CDS CCA 90 bp | TTTTGGGCTGTGACCAGCCTGTTGGACTCAGGTTGTTTGGGCTGCTaGACAGGGCTGAAGGTGAGGCTGATTCACTGTGACTTCGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: FWAVTSLLDSGCLGC*TGLKVRLIHCDFEL Trigger: CAATTCGAAGTCACAGTGAATCAGCCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGCCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS-3UTR CAA 90 bp | AGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGGAAGGGCTGGAGGTGTaGAAAGTGAAGGCATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RHSLSTKFCSTKAGSPRWEGLEV*KVKAWG Trigger: ACCCCATGCCTTCACTTTCAACACCTCCAGCCCTTC...CCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGATTGACCACAGTCCTTaGCTTATTCGGCAAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IGAAPGRQIQHVGGCQRWIDHSP*LIRQEN Trigger: GTTTTCTTGCCGAATAAGCAAAGGACTGTGGTCAAT...CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | GCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCTTGGACTCAGGTTGTTaGGGCTGCTGGACAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AIHTGHLRHSLSTKFCSTLDSGC*GCWTGL Trigger: CAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAA...GGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGAAAGGTCTCTCTTCTTaGACTTTCTTCACACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGSSWKTDSARGRLPKVEKGLSS*TFFTQS Trigger: TGACTGTGTGAAGAAAGTCAAAGAAGAGAGACCTTT...CTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS GCA 90 bp | GGAGTTGGGTCAACCACCTTTAGGATCTTTACTGCAACATCTCCATaGCACTTGCCCTTGTACACAGTGCCAAAGGAACCTGACCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GVGSTTFRIFTATSP*HLPLYTVPKEPDPI Trigger: GATCGGGTCAGGTTCCTTTGGCACTGTGTACAAGGGCAAGTGGCATGGAGATGTTGCAGTAAAGATCCTAAAGGTGGTTGACCCAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS CCA 90 bp | GGAAACAGATTCTCGCATCCGACGCATTGGGAAAGAAGGTGGTGCTaGGACTCCACTGTCACCAACAGTGGAATTTGGAAACAGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNRFSHPTHWERRWC*DSTVTNSGIWKQQE Trigger: CTCTTGCTGTTTCCAAATTCCACTGTTGGTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAGAATCTGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | TGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCACGTGCTTTCTTACCTTaGTGTTCCTGGAGAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WPGLHVQNWHCTTVHIGSRAFLP*CSWRSL Trigger: CAGACTTCTCCAGGAACACAAAGGTAAGAAAGCACG...TGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | GCACAGAGCCAGTGGGCTGTTCAACCTGCTGAGAACCACTCCAGCGTGACTTCACTTGTTAAGGAGATGTaGGATTTCATGTCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQSQWAVQPAENHSSVTSLVKEM*DFMSLW Trigger: CCACAGAGACATGAAATCCAACATCTCCTTAACAAG...TGAAGTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAGCCCACTGGCTCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203142.2 |
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| CDS CCA 90 bp | CACTGTGACTTCGAATTGCATCTCTTCCCCTCAGACAAAATCGTCTaGAGCACGCCCTGGGAGAAGCATTCAGGCTGTTACTCTCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: HCDFELHLFPSDKIV*STPWEKHSGCYSQS Trigger: TGATTGAGAGTAACAGCCTGAATGCTTCTCCCAGGGCGTGCTCCAGACGATTTTGTCTGAGGGGAAGAGATGCAATTCGAAGTCACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147979.3 |
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| CDS-3UTR CAA 90 bp | AGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCACCAACAGTGGAATTaGGAAACAGCAAGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHSLSTKFCSTKAGSPRWHQQWN*ETARAV Trigger: GACAGCTCTTGCTGTTTCCAAATTCCACTGTTGGTG...CCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS-3UTR CAA 90 bp | AAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTAAAAACCCGGATAGTATaGCTTGTCTTAGAAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: KPSTQDTLDTVCPQSSVVKTRIV*LVLEES Trigger: GGATTCTTCTAAGACAAGCAATACTATCCGGGTTTT...TACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS GCA 72 bp | CAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTaGCTTCTGGGGCCATCCACAGCACAGAGCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QVPNCMSLQQPE*LLGPSTAQSQW Trigger: CCACTGGCTCTGTGCTGTGGATGGCCCCAGAAGGCACTCCGGCTGCTGCAGGGACATGCAATTGGGAACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203759.2 |
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| CDS CAA 90 bp | GCACAGGGGTTTTGGGCTGTGACCAGCCTGTTGGACTCAGGTTGTTaGGGCTGCTGGACAGGGCTGAAGGTGAGGCTGATTCACTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AQGFWAVTSLLDSGC*GCWTGLKVRLIHCD Trigger: GTCACAGTGAATCAGCCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGCCCAAAACCCCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS TCA 72 bp | GATGTAGTCAGCGTGCAAGCATTGATGTCCTCAGTGTaGGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DVVSVQALMSSV*AARCREGSEAL Trigger: GAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGACATCAATGCTTGCACGCTGACTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS CCA 72 bp | ATGTGGACATTGGGAGTGGACGTTGACCTCTGCCTCTaGGACAGGGAACCTTCTGAGGAAGGGCTGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MWTLGVDVDLCL*DREPSEEGLEV Trigger: CACCTCCAGCCCTTCCTCAGAAGGTTCCCTGTCCCAGAGGCAGAGGTCAACGTCCACTCCCAATGTCCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS GCA 72 bp | GCTGTGACCAGCCTGTTGGACTCAGGTTGTTTGGGCTaGTGGACAGGGCTGAAGGTGAGGCTGATTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVTSLLDSGCLG*WTGLKVRLIHC Trigger: ACAGTGAATCAGCCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CCA 72 bp | AGGCATCCGGGAAACAGATTCTCGCATCCGACGCATTaGGAAAGAAGGTGGTGCTGGGACTCCACTGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: RHPGNRFSHPTH*ERRWCWDSTVT Trigger: GGTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAGAATCTGTTTCCCGGATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CCA 72 bp | GTGACCAGCCTGTTGGACTCAGGTTGTTTGGGCTGCTaGACAGGGCTGAAGGTGAGGCTGATTCACTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VTSLLDSGCLGC*TGLKVRLIHCD Trigger: GTCACAGTGAATCAGCCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAACAGGCTGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CAA 72 bp | CAGGCATCCGGGAAACAGATTCTCGCATCCGACGCATaGGGAAAGAAGGTGGTGCTGGGACTCCACTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QASGKQILASDA*GKKVVLGLHCH Trigger: GTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAGAATCTGTTTCCCGGATGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CAA 72 bp | TTTTGGGCTGTGACCAGCCTGTTGGACTCAGGTTGTTaGGGCTGCTGGACAGGGCTGAAGGTGAGGCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: FWAVTSLLDSGC*GCWTGLKVRLI Trigger: AATCAGCCTCACCTTCAGCCCTGTCCAGCAGCCCAAACAACCTGAGTCCAACAGGCTGGTCACAGCCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS TCA 72 bp | TCAGAGGCGCTCCTGTTGATTTTCGGCAGAGAGTGCTaGAGCAGCTCGATGGAAGACAGGATCTGGGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SEALLLIFGREC*SSSMEDRIWGN Trigger: GTTTCCCCAGATCCTGTCTTCCATCGAGCTGCTTCAGCACTCTCTGCCGAAAATCAACAGGAGCGCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS CAA 72 bp | GGGGAGATGCAGCTGGAGCCATCAAACACCGCATCTTaGAGTCCAAAGCCATTGCTGATCGTCTTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GEMQLEPSNTAS*SPKPLLIVFQA Trigger: AGCTTGGAAGACGATCAGCAATGGCTTTGGACTCAAAGATGCGGTGTTTGATGGCTCCAGCTGCATCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS CAA 90 bp | ACAATGGTAGGGGAGATGCAGCTGGAGCCATCAAACACCGCATCTTaGAGTCCAAAGCCATTGCTGATCGTCTTCCAAGCTCCCTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: TMVGEMQLEPSNTAS*SPKPLLIVFQAPCM Trigger: CATACAGGGAGCTTGGAAGACGATCAGCAATGGCTTTGGACTCAAAGATGCGGTGTTTGATGGCTCCAGCTGCATCTCCCCTACCATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS CAA 90 bp | GGGTCAACCACCTTTAGGATCTTTACTGCAACATCTCCATGCCACTaGCCCTTGTACACAGTGCCAAAGGAACCTGACCCGATCCGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSTTFRIFTATSPCH*PLYTVPKEPDPIRV Trigger: TACTCGGATCGGGTCAGGTTCCTTTGGCACTGTGTACAAGGGCAAGTGGCATGGAGATGTTGCAGTAAAGATCCTAAAGGTGGTTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS TCA 72 bp | GCTTGTCTTAGAAGAATCCGTGAGCTTGCCATCATCTaGGGCCCGGCGCTGATAGCCAAACTGCTGAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: ACLRRIRELAII*GPALIAKLLNN Trigger: ATTGTTCAGCAGTTTGGCTATCAGCGCCGGGCCTCAGATGATGGCAAGCTCACGGATTCTTCTAAGACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
||
| CDS CCA 72 bp | TTCTCGCATCCGACGCATTGGGAAAGAAGGTGGTGCTaGGACTCCACTGTCACCAACAGTGGAATTTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FSHPTHWERRWC*DSTVTNSGIWK Trigger: TTTCCAAATTCCACTGTTGGTGACAGTGGAGTCCCAGCACCACCTTCTTTCCCAATGCGTCGGATGCGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CCA 72 bp | TTGAAAGTGAAGGCATGGGGTGTAGAGTATCTGTGCTaGGAACTAGCAGGCATCCGGGAAACAGATTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LKVKAWGVEYLC*ELAGIRETDSR Trigger: GCGAGAATCTGTTTCCCGGATGCCTGCTAGTTCCCAGCACAGATACTCTACACCCCATGCCTTCACTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CCA 72 bp | TTCGAATTGCATCTCTTCCCCTCAGACAAAATCGTCTaGAGCACGCCCTGGGAGAAGCATTCAGGCTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: FELHLFPSDKIV*STPWEKHSGCY Trigger: GTAACAGCCTGAATGCTTCTCCCAGGGCGTGCTCCAGACGATTTTGTCTGAGGGGAAGAGATGCAATTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147979.3 |
||
| CDS CAA 72 bp | GAGCCATCAAACACCGCATCTTTGAGTCCAAAGCCATaGCTGATCGTCTTCCAAGCTCCCTGTATGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EPSNTASLSPKP*LIVFQAPCMCS Trigger: GGAGCACATACAGGGAGCTTGGAAGACGATCAGCAATGGCTTTGGACTCAAAGATGCGGTGTTTGATGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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| CDS GCA 72 bp | GTGTTGAAAGTGAAGGCATGGGGTGTAGAGTATCTGTaGTGGGAACTAGCAGGCATCCGGGAAACAGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLKVKAWGVEYL*WELAGIRETDS Trigger: AGAATCTGTTTCCCGGATGCCTGCTAGTTCCCAGCACAGATACTCTACACCCCATGCCTTCACTTTCAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 ENSMUST00000147979.3 |
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| CDS CAA 72 bp | GAAGACAGGATCTGGGGAAACAAAGGTCTCTCTTCTTaGACTTTCTTCACACAGTCAGCCACCAACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EDRIWGNKGLSS*TFFTQSATNLF Trigger: GAAGAGGTTGGTGGCTGACTGTGTGAAGAAAGTCAAAGAAGAGAGACCTTTGTTTCCCCAGATCCTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000451.14 ENSMUST00000112949.8 |
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