Pregenerated sensors for RAE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027509Ensembl transcript IDs: ENSMUST00000029013.10, ENSMUST00000132212.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAAGAACAGTCCCTCCAGGAGTGGACACCCATGGCCAGGGCTGTaGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: NKNSPSRSGHPWPGL*ATEGLSPSLGREEM Trigger: CATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR GCA 90 bp | ACAGGGCTCACCAACAGTTCCCACCCAACACTGTCAAATACACACTaGTGGACACAGTGCCCCCAAGATCTGACTCCAGTTGAGAATCTC | + |
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Preference number: 1 (lower is better) Translates to: TGLTNSSHPTLSNTH*WTQCPQDLTPVENL Trigger: GAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTGAGCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CCA 90 bp | CAGTTGAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTGAATaGAGAGACGGCAAGTCGCCAGGATGCTGTGCTGATGCTCAACAA | + |
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Preference number: 1 (lower is better) Translates to: QLRISVSGKPQQGAE*RDGKSPGCCADAQQ Trigger: TTGTTGAGCATCAGCACAGCATCCTGGCGACTTGCCGTCTCTCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CCA 90 bp | GGGCTCACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTaGACACAGTGCCCCCAAGATCTGACTCCAGTTGAGAATCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GLTNSSHPTLSNTHC*TQCPQDLTPVENLS Trigger: ACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTGAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR TCA 90 bp | AAATACACACTGCTGGACACAGTGCCCCCAAGATCTGACTCCAGTTaGGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: KYTLLDTVPPRSDSS*ESQFQENRSRELNG Trigger: TCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR TCA 90 bp | CAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTaGCTCCAGTTGAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: QHCQIHTAGHSAPKI*LQLRISVSGKPQQG Trigger: TCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR GCA 90 bp | AACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTaGCCCCAAGATCTGACTCCAGTTGAGAATCTCAGTTTCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: NSSHPTLSNTHCWTQ*PQDLTPVENLSFRK Trigger: TTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CAA 90 bp | CACCCATGGCCAGGGCTGTGGGCCACCGAGGGCTTGAGCCCAAGTTaGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HPWPGLWATEGLSPS*GREEMKLQQSQLQA Trigger: GGCCTGAAGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR-3UTR CCA 90 bp | ACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCCATGGCCAGGGCTGTaGGCCACCGAGGGCTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: TNSSHPTLSNTHCWTQCPPWPGL*ATEGLS Trigger: GCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGG...GGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR-3UTR CCA 90 bp | CCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGACAGGAGTGGACACCCATaGCCAGGGCTGTGGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: PPNTVKYTLLDTVPPRSDRSGHP*PGLWAT Trigger: GGTGGCCCACAGCCCTGGCCATGGGTGTCCACTCCT...GTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR-3UTR CCA 90 bp | CACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCAGCAGGGAGCTGAATaGAGAGACGGCAAGTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: HQQFPPNTVKYTLLDTVPQQGAE*RDGKSP Trigger: TGGCGACTTGCCGTCTCTCCATTCAGCTCCCTGCTG...GGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CCA 72 bp | AGTCCCTCCAGGAGTGGACACCCATGGCCAGGGCTGTaGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SPSRSGHPWPGL*ATEGLSPSLGR Trigger: TCTGCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCCACTCCTGGAGGGACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CCA 72 bp | CTCAACAAGAACAGTCCCTCCAGGAGTGGACACCCATaGCCAGGGCTGTGGGCCACCGAGGGCTTGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LNKNSPSRSGHP*PGLWATEGLSP Trigger: TGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CCA 72 bp | TGTGCTGATGCTCAACAAGAACAGTCCCTCCAGGAGTaGACACCCATGGCCAGGGCTGTGGGCCACCGAGGG | + |
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Preference number: 3 (lower is better) Translates to: CADAQQEQSLQE*TPMARAVGHRG Trigger: CCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATCAGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR GCA 72 bp | CAGGGAGCTGAATGGAGAGACGGCAAGTCGCCAGGATaGTGTGCTGATGCTCAACAAGAACAGTCCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: QGAEWRDGKSPG*CADAQQEQSLQ Trigger: CTGGAGGGACTGTTCTTGTTGAGCATCAGCACAGCATCCTGGCGACTTGCCGTCTCTCCATTCAGCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR TCA 72 bp | GAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTaGATGGAGAGACGGCAAGTCGCCAGGATGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: ENLSFRKTAAGS*MERRQVARMLC Trigger: GCACAGCATCCTGGCGACTTGCCGTCTCTCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR TCA 72 bp | CTGCTGGACACAGTGCCCCCAAGATCTGACTCCAGTTaGGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLDTVPPRSDSS*ESQFQENRSRE Trigger: CTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR GCA 72 bp | ACCAACAGTTCCCACCCAACACTGTCAAATACACACTaGTGGACACAGTGCCCCCAAGATCTGACTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: TNSSHPTLSNTH*WTQCPQDLTPV Trigger: AACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CCA 72 bp | AACAGTTCCCACCCAACACTGTCAAATACACACTGCTaGACACAGTGCCCCCAAGATCTGACTCCAGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: NSSHPTLSNTHC*TQCPQDLTPVE Trigger: CTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR GCA 72 bp | CACCCAACACTGTCAAATACACACTGCTGGACACAGTaGCCCCAAGATCTGACTCCAGTTGAGAATCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: HPTLSNTHCWTQ*PQDLTPVENLS Trigger: ACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR TCA 72 bp | CAAATACACACTGCTGGACACAGTGCCCCCAAGATCTaGCTCCAGTTGAGAATCTCAGTTTCAGGAAAACCG | + |
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Preference number: 3 (lower is better) Translates to: QIHTAGHSAPKI*LQLRISVSGKP Trigger: CGGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR TCA 90 bp | GGACACCCATGGCCAGGGCTGTGGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCCCGGATTTGGAGGGTTaGTGTAGTGAATGGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: GHPWPGLWATEGLSPSLGPDLEG*CSEWQL Trigger: GAGTTGCCATTCACTACATCAACCCTCCAAATCCGG...GCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | GGACACCCATGGCCAGGGCTGTGGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCGGTTATCTGTGGTTGTaGTCCCAAACATGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GHPWPGLWATEGLSPSLGGYLWL*SQTCWS Trigger: GGACCAGCATGTTTGGGAGCACAACCACAGATAACC...GCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | GGACACCCATGGCCAGGGCTGTGGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCTCAGGTCCCACATCTTaGCTGTCTTGTCACACGATG | + |
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Preference number: 4 (lower is better) Translates to: GHPWPGLWATEGLSPSLGSGPTS*LSCHTM Trigger: CATCGTGTGACAAGACAGCCAAGATGTGGGACCTGA...GCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGGCCATGGGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| 3UTR CAA 72 bp | CCAGGGCTGTGGGCCACCGAGGGCTTGAGCCCAAGTTaGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGLWATEGLSPS*GREEMKLQQSQ Trigger: CTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCACAGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | TGCTGTGCTGATGCTCAACAAGAACAGTCCCTCCAGGAGTGGACACCCATGGCCGCAGACGTCAAGCACTaGCCCCGTGTGCATCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CCADAQQEQSLQEWTPMAADVKH*PRVHLL Trigger: CAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGC...GGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATCAGCACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | GTGGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAAATCAGGCCCCTCTCTaGAGTGGCTACCACAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VGHRGLEPKFGQRGDETPNQAPL*SGYHSH Trigger: ATGGCTGTGGTAGCCACTGCAGAGAGGGGCCTGATT...TGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | CCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGACGGCCCCTCTCTGCAGTaGCTACCACAGCCATCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PPNTVKYTLLDTVPPRSDGPSLQ*LPQPSG Trigger: ACCCGATGGCTGTGGTAGCCACTGCAGAGAGGGGCC...GTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR TCA 90 bp | GTGGGCCACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCACAAGCTGCGATGGGCTaGTCTAACTGTTCCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: VGHRGLEPKFGQRGDETPQAAMG*SNCSEV Trigger: GACTTCGGAACAGTTAGATCAGCCCATCGCAGCTTG...TGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | GGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTCATCGGAGCCCACAGTaGCAAGGGTACCATGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GLEPKFGQRGDETPTVPAHRSPQ*QGYHGQ Trigger: CTGTCCATGGTACCCTTGCCACTGTGGGCTCCGATG...AGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR TCA 90 bp | TGCTGTGCTGATGCTCAACAAGAACAGTCCCTCCAGGAGTGGACACCCATGGCCGTAAAGTTGGCGGGCTaGAAGACAGACAACCGATGC | + |
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Preference number: 4 (lower is better) Translates to: CCADAQQEQSLQEWTPMAVKLAG*KTDNRC Trigger: GCATCGGTTGTCTGTCTTTCAGCCCGCCAACTTTAC...GGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATCAGCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | ACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCGTTTGCCCACTGTCCTaGACTTCCCAGCAGCGAACA | + |
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Preference number: 4 (lower is better) Translates to: TEGLSPSLGREEMKLQQSVCPLS*TSQQRT Trigger: TGTTCGCTGCTGGGAAGTGCAGGACAGTGGGCAAAC...GGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | AATGGAGAGACGGCAAGTCGCCAGGATGCTGTGCTGATGCTCAACAAGAACAGTGGCCCCGTGTGCATCTaGTGGGCCTTTGGAATGGTT | + |
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Preference number: 4 (lower is better) Translates to: NGETASRQDAVLMLNKNSGPVCI*WAFGMV Trigger: AACCATTCCAAAGGCCCAGCAGATGCACACGGGGCC...ACTGTTCTTGTTGAGCATCAGCACAGCATCCTGGCGACTTGCCGTCTCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | TCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGGCTGGGCCTTTGGAATaGTTTGCCCACTGTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SHPTLSNTHCWTQCPQDLAGPLE*FAHCPA Trigger: TGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGC...CAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | TCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGCCCGTGTGCATCTGCTaGGCCTTTGGAATGGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SHPTLSNTHCWTQCPQDLPVCIC*AFGMVC Trigger: GCAAACCATTCCAAAGGCCCAGCAGATGCACACGGG...CAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTCAGGCCAGCAGCAAGCTGCGATaGGCTGATCTAACTGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: SPSLGREEMKLQQSQLQASSKLR*ADLTVP Trigger: CGGAACAGTTAGATCAGCCCATCGCAGCTTGCTGCT...GGCCTGAAGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR TCA 90 bp | AATGGAGAGACGGCAAGTCGCCAGGATGCTGTGCTGATGCTCAACAAGAACAGTCTTTGTCCCAGAAGCTaGACCTACCATCGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NGETASRQDAVLMLNKNSLCPRS*TYHRSP Trigger: TGGGCTCCGATGGTAGGTTCAGCTTCTGGGACAAAG...ACTGTTCTTGTTGAGCATCAGCACAGCATCCTGGCGACTTGCCGTCTCTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | CACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCGCCTTTGGAATGGTTTaGCCACTGTCCTGCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: HQQFPPNTVKYTLLDTVPAFGMV*PLSCTS Trigger: GGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGC...GGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | GGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTCTGAATGGCCTGGTTaGTGTTCAGGTCCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: GLEPKFGQRGDETPTVPASEWPG*CSGPTS Trigger: AGATGTGGGACCTGAACAGCAACCAGGCCATTCAGA...AGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | CAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAACACACCGATGCTGGTaGTTCAGGGGAGACTCGATT | + |
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Preference number: 4 (lower is better) Translates to: QQFPPNTVKYTLLDTVPPTHRCW*FRGDSI Trigger: AATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGT...TGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | ACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCATCTGCTGGGCCTTTaGAATGGTTTGCCCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: TNSSHPTLSNTHCWTQCPHLLGL*NGLPTV Trigger: GACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATG...GGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR TCA 90 bp | ACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGTCATGCTGTGCTATCTaGATGGCCTGGTTGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TVPTQHCQIHTAGHSAPKSCCAI*MAWLLF Trigger: GAACAGCAACCAGGCCATTCAGATAGCACAGCATGA...CTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR TCA 90 bp | ACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCTGTTTCCATTGTGATTaGAGCAGCAAGCTGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: TEGLSPSLGREEMKLQQSCFHCD*SSKLRW Trigger: CCATCGCAGCTTGCTGCTTCAATCACAATGGAAACA...GGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | CGCCAGGATGCTGTGCTGATGCTCAACAAGAACAGTCCCTCCAGGAGTGGACACAAGACAGACAACCGATaGTGTCATCAGGAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RQDAVLMLNKNSPSRSGHKTDNR*CHQEKM Trigger: CATCTTCTCCTGATGACAGCATCGGTTGTCTGTCTT...GTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATCAGCACAGCATCCTGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | AAAACACAACACAGGGCTCACCAACAGTTCCCACCCAACACTGTCAAATACACAAGCACTGGCCCCGTGTaGATCTGCTGGGCCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: KTQHRAHQQFPPNTVKYTSTGPV*ICWAFG Trigger: TCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCT...TGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTGAGCCCTGTGTTGTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | CACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCAGGAGCATCATGCTGTaGTATCTGAATGGCCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: HRGLEPKFGQRGDETPTVRSIML*YLNGLV Trigger: AACCAGGCCATTCAGATAGCACAGCATGATGCTCCT...GACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR GCA 90 bp | CACCGAGGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCGGGTATATCACATCTaGACAGTAACAGCGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRGLEPKFGQRGDETPTVRVYHI*TVTAFR Trigger: CCTGAACGCTGTTACTGTGCAGATGTGATATACCCG...GACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCCTCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS-3UTR CCA 90 bp | AATGGAGAGACGGCAAGTCGCCAGGATGCTGTGCTGATGCTCAACAAGAACAGTTGCTCCCAAACATGCTaGTCCCACCAGTCCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NGETASRQDAVLMLNKNSCSQTC*SHQSQI Trigger: GATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCA...ACTGTTCTTGTTGAGCATCAGCACAGCATCCTGGCGACTTGCCGTCTCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | CACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCGCTGTGCTATCTGAATaGCCTGGTTGCTGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQQFPPNTVKYTLLDTVPAVLSE*PGCCSG Trigger: ACCTGAACAGCAACCAGGCCATTCAGATAGCACAGC...GGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR TCA 90 bp | AGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTCAGGCCTGTCACACGATGCTGTaGATACTTTGCTCCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLGREEMKLQQSQLQACHTML*ILCSHH Trigger: ATGATGGGAGCAAAGTATTCACAGCATCGTGTGACA...GGCCTGAAGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR TCA 90 bp | CAGTTGAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTGAATGGAGAGACGAGACTCGATTCTCCTaGACTCAGAGGGCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRISVSGKPQQGAEWRDETRFS*TQRAGS Trigger: AGAACCAGCCCTCTGAGTTCAGGAGAATCGAGTCTC...GTCTCTCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTCAGGCCCAGCGTTCAGGGAGTTaGAAGACCATCATAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLGREEMKLQQSQLQAQRSGS*KTIIGF Trigger: AAATCCTATGATGGTCTTGCAACTCCCTGAACGCTG...GGCCTGAAGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTGGACCAGTCGTAGCTaGAAGCATAGGCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLEPKFGQRGDETPTVPAWTSRS*KHRQIC Trigger: ACATATTTGCCTATGCTTCCAGCTACGACTGGTCCA...AGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | CAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAAAACTCATGTCCCTTaGACCAGTCGTAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQFPPNTVKYTLLDTVPPKTHVP*TSRSWK Trigger: CTTCCAGCTACGACTGGTCCAAGGGACATGAGTTTT...TGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR TCA 90 bp | CAGTTGAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTGAATGGAGAGACGACCATCATAGGATTTaGGGACCGCGTATCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLRISVSGKPQQGAEWRDDHHRI*GPRIPE Trigger: TTCTGGGATACGCGGTCCTCAAATCCTATGATGGTC...GTCTCTCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR GCA 90 bp | TCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGTGTCTTGTCACACGATaGTGTGAATACTTTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHPTLSNTHCWTQCPQDLCLVTR*CEYFAP Trigger: GGGAGCAAAGTATTCACAGCATCGTGTGACAAGACA...CAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGAGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTCACACAGCTGTAGTTTaGGGCTTTGATCCAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLEPKFGQRGDETPTVPAHTAVV*GFDPMY Trigger: ATACATTGGATCAAAGCCCCAAACTACAGCTGTGTG...AGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCTCAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGCCCCCAAGATCTGACTCCAGTTGAGAATCTCAGTTTCAGGAAAACCGTGGCAAGGGTACCATaGACAGGATGGAAGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TQCPQDLTPVENLSFRKTVARVP*TGWKAI Trigger: GATTGCCTTCCATCCTGTCCATGGTACCCTTGCCAC...GGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR TCA 90 bp | TCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGAACATCATTCGCCCATaGTCCTGCAATAAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHPTLSNTHCWTQCPQDLNIIRP*SCNKEV Trigger: AACTTCCTTATTGCAGGATCATGGGCGAATGATGTT...CAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | ACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCGTACCGTTGGATCGATaGCATTTGAAGGTGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TNSSHPTLSNTHCWTQCPVPLDR*HLKVKL Trigger: TAACTTCACCTTCAAATGCCATCGATCCAACGGTAC...GGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGCCCCCAAGATCTGACTCCAGTTGAGAATCTCAGTTTCAGGAAAACCAATATGTTTCCATTGTaGTTGAAGCAGCAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TQCPQDLTPVENLSFRKTNMFPL*LKQQAA Trigger: CGCAGCTTGCTGCTTCAATCACAATGGAAACATATT...GGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | AAAACACAACACAGGGCTCACCAACAGTTCCCACCCAACACTGTCAAATACACATCTTTAGTTTGGTCCTaGCATCTTTGTCCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTQHRAHQQFPPNTVKYTSLVWS*HLCPRS Trigger: GCTTCTGGGACAAAGATGCCAGGACCAAACTAAAGA...TGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGTGAGCCCTGTGTTGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CCA 90 bp | TATTATAAAACACAACACAGGGCTCACCAACAGTTCCCACCCAACACTGTCAAATTCGATATCCTTCATTaGATTGTGGTTATCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YYKTQHRAHQQFPPNTVKFDILH*IVVICG Trigger: ACCACAGATAACCACAATCCAATGAAGGATATCGAA...TTTGACAGTGTTGGGTGGGAACTGTTGGTGAGCCCTGTGTTGTGTTTTATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS CCA 90 bp | CCAGCAGACGTCAAGCACTGGCCCCGTGTGCATCTGCTGGGCCTTTaGAATGGTTTGCCCACTGTCCTGCACTTCCCAGCAGCGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: PADVKHWPRVHLLGL*NGLPTVLHFPAANI Trigger: GATGTTCGCTGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS CCA 90 bp | TCATCACTCCAGCAGACGTCAAGCACTGGCCCCGTGTGCATCTGCTaGGCCTTTGGAATGGTTTGCCCACTGTCCTGCACTTCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLQQTSSTGPVCIC*AFGMVCPLSCTSQQ Trigger: CTGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGCTGGAGTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS GCA 90 bp | TTGCTCCCATCATCACTCCAGCAGACGTCAAGCACTGGCCCCGTGTaGATCTGCTGGGCCTTTGGAATGGTTTGCCCACTGTCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLPSSLQQTSSTGPV*ICWAFGMVCPLSCT Trigger: AGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGCTGGAGTGATGATGGGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS CCA 90 bp | AGACGTCAAGCACTGGCCCCGTGTGCATCTGCTGGGCCTTTGGAATaGTTTGCCCACTGTCCTGCACTTCCCAGCAGCGAACATCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRQALAPCASAGPLE*FAHCPALPSSEHHS Trigger: CGAATGATGTTCGCTGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS-3UTR CAA 90 bp | GATGCTCAACAAGAACAGTCCCTCCAGGAGTGGACACCCATGGCCAGGGCTGTGTTCAGGTCCCACATCTaGGCTGTCTTGTCACACGAT | + |
|
Preference number: 5 (lower is better) Translates to: DAQQEQSLQEWTPMARAVFRSHI*AVLSHD Trigger: ATCGTGTGACAAGACAGCCAAGATGTGGGACCTGAA...CACAGCCCTGGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | GATGCTCAACAAGAACAGTCCCTCCAGGAGTGGACACCCATGGCCAGGGCTGTGTTGGTCCTGGCATCTTaGTCCCAGAAGCTGAACCTA | + |
|
Preference number: 5 (lower is better) Translates to: DAQQEQSLQEWTPMARAVLVLAS*SQKLNL Trigger: TAGGTTCAGCTTCTGGGACAAAGATGCCAGGACCAA...CACAGCCCTGGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS GCA 90 bp | CTCAGAGGGCTGGTTCTCCAGCTGATAGACAATCAGGCCCCTCTCTaGAGTGGCTACCACAGCCATCGGGTATATCACATCTGCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRGLVLQLIDNQAPL*SGYHSHRVYHICTV Trigger: TACTGTGCAGATGTGATATACCCGATGGCTGTGGTAGCCACTGCAGAGAGGGGCCTGATTGTCTATCAGCTGGAGAACCAGCCCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS CCA 90 bp | AGGGCTGGTTCTCCAGCTGATAGACAATCAGGCCCCTCTCTGCAGTaGCTACCACAGCCATCGGGTATATCACATCTGCACAGTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAGSPADRQSGPSLQ*LPQPSGISHLHSNS Trigger: GCTGTTACTGTGCAGATGTGATATACCCGATGGCTGTGGTAGCCACTGCAGAGAGGGGCCTGATTGTCTATCAGCTGGAGAACCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS-3UTR CAA 90 bp | TCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGGGCCTTTGGAATGGTTaGCCCACTGTCCTGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHPTLSNTHCWTQCPQDLGLWNG*PTVLHF Trigger: GAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCC...CAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS TCA 90 bp | GTTCCGAAGTCTTTAGTTTGGTCCTGGCATCTTTGTCCCAGAAGCTaGACCTACCATCGGAGCCCACAGTGGCAAGGGTACCATGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VPKSLVWSWHLCPRS*TYHRSPQWQGYHGQ Trigger: CTGTCCATGGTACCCTTGCCACTGTGGGCTCCGATGGTAGGTTCAGCTTCTGGGACAAAGATGCCAGGACCAAACTAAAGACTTCGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCTGATGCTCAACAAGAACAGTCCCTCCAGGAGTGGACACCCATGGCCGAAGTGTTGGTACCGTaGGATCGATGGCATTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCADAQQEQSLQEWTPMAEVLVP*DRWHLK Trigger: CTTCAAATGCCATCGATCCAACGGTACCAACACTTC...GGCCATGGGTGTCCACTCCTGGAGGGACTGTTCTTGTTGAGCATCAGCACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | TCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGTGTGGTTATCTGTGGTaGTGCTCCCAAACATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHPTLSNTHCWTQCPQDLCGYLW*CSQTCW Trigger: CCAGCATGTTTGGGAGCACAACCACAGATAACCACA...CAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS TCA 90 bp | TGCTGTTCAGGTCCCACATCTTGGCTGTCTTGTCACACGATGCTGTaGATACTTTGCTCCCATCATCACTCCAGCAGACGTCAAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CCSGPTSWLSCHTML*ILCSHHHSSRRQAL Trigger: CAGTGCTTGACGTCTGCTGGAGTGATGATGGGAGCAAAGTATTCACAGCATCGTGTGACAAGACAGCCAAGATGTGGGACCTGAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS TCA 90 bp | TGCACAGTAACAGCGTTCAGGGAGTTGCAAGACCATCATAGGATTTaGGGACCGCGTATCCCAGAACTTCAGAGTCTTATCCCAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CTVTAFRELQDHHRI*GPRIPELQSLIPAP Trigger: GGGAGCTGGGATAAGACTCTGAAGTTCTGGGATACGCGGTCCTCAAATCCTATGATGGTCTTGCAACTCCCTGAACGCTGTTACTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS GCA 90 bp | CTGGTTGCTGTTCAGGTCCCACATCTTGGCTGTCTTGTCACACGATaGTGTGAATACTTTGCTCCCATCATCACTCCAGCAGACGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVAVQVPHLGCLVTR*CEYFAPIITPADVK Trigger: CTTGACGTCTGCTGGAGTGATGATGGGAGCAAAGTATTCACAGCATCGTGTGACAAGACAGCCAAGATGTGGGACCTGAACAGCAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS GCA 90 bp | CCAGTCGGCTTGTTCTGTTTGTCTTTAAAAATAGCCACACACCGATaGTGGTGCTTCAGGGGAGACTCGATTCTCCTGAACTCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVGLFCLSLKIATHR*WCFRGDSILLNSEG Trigger: GCCCTCTGAGTTCAGGAGAATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAAGCCGACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS CCA 90 bp | GTCGGCTTGTTCTGTTTGTCTTTAAAAATAGCCACACACCGATGCTaGTGCTTCAGGGGAGACTCGATTCTCCTGAACTCAGAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGLFCLSLKIATHRC*CFRGDSILLNSEGW Trigger: CCAGCCCTCTGAGTTCAGGAGAATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAAGCCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS GCA 90 bp | GGCTTGTTCTGTTTGTCTTTAAAAATAGCCACACACCGATGCTGGTaGTTCAGGGGAGACTCGATTCTCCTGAACTCAGAGGGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLFCLSLKIATHRCW*FRGDSILLNSEGWF Trigger: GAACCAGCCCTCTGAGTTCAGGAGAATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | AGCCCAAGTTTGGGCAGAGAGGAGATGAAACTCCAACAGTCCCAGCTTCAGGCCGCAAACCCAGTCGGCTaGTTCTGTTTGTCTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLGREEMKLQQSQLQAANPVG*FCLSLK Trigger: TTTTAAAGACAAACAGAACAAGCCGACTGGGTTTGC...GGCCTGAAGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | CAGTTGAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTGAATGGAGAGACCACTGCATAGATGTCTaGAGGAGCCGAAGTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLRISVSGKPQQGAEWRDHCIDV*RSRSVG Trigger: ACCAACACTTCGGCTCCTCAAGACATCTATGCAGTG...GTCTCTCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS CCA 90 bp | CCTTCATTGGATTGTGGTTATCTGTGGTTGTGCTCCCAAACATGCTaGTCCCACCAGTCCCAAATCCAGAGGTTGATCCAAACAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLDCGYLWLCSQTC*SHQSQIQRLIQTDS Trigger: TGAGTCTGTTTGGATCAACCTCTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCCAAGATCTGACCTTCGATATCCTTCATaGGATTGTGGTTATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPNTVKYTLLDTVPPRSDLRYPS*DCGYLW Trigger: CCACAGATAACCACAATCCAATGAAGGATATCGAAG...GTCAGATCTTGGGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS GCA 90 bp | TATCCTTCATTGGATTGTGGTTATCTGTGGTTGTGCTCCCAAACATaGTGGTCCCACCAGTCCCAAATCCAGAGGTTGATCCAAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YPSLDCGYLWLCSQT*WSHQSQIQRLIQTD Trigger: GTCTGTTTGGATCAACCTCTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS GCA 90 bp | ATGTCACTTCGATATCCTTCATTGGATTGTGGTTATCTGTGGTTGTaGTCCCAAACATGCTGGTCCCACCAGTCCCAAATCCAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MSLRYPSLDCGYLWL*SQTCWSHQSQIQRL Trigger: CAACCTCTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATATCGAAGTGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS CCA 90 bp | GAGAAGATGTCACTTCGATATCCTTCATTGGATTGTGGTTATCTGTaGTTGTGCTCCCAAACATGCTGGTCCCACCAGTCCCAAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EKMSLRYPSLDCGYL*LCSQTCWSHQSQIQ Trigger: CTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATATCGAAGTGACATCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCCCCCAAGATCTGACTCCAGTTGAGAATCTCAGTTTCAGGAAAACCACAGCGTTCAGGGAGTaGCAAGACCATCATAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: TQCPQDLTPVENLSFRKTTAFRE*QDHHRI Trigger: AATCCTATGATGGTCTTGCAACTCCCTGAACGCTGT...GGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | ACCAACAGTTCCCACCCAACACTGTCAAATACACACTGCTGGACACAGTGCCCCTTGGATCGATGGCATTaGAAGGTGAAGTTATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNSSHPTLSNTHCWTQCPLDRWH*KVKLSL Trigger: CAAAGATAACTTCACCTTCAAATGCCATCGATCCAA...GGGGCACTGTGTCCAGCAGTGTGTATTTGACAGTGTTGGGTGGGAACTGTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | CAGTTGAGAATCTCAGTTTCAGGAAAACCGCAGCAGGGAGCTGAATGGAGAGACATATCCTTCATTGGATaGTGGTTATCTGTGGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLRISVSGKPQQGAEWRDISFIG*WLSVVV Trigger: CACAACCACAGATAACCACAATCCAATGAAGGATAT...GTCTCTCCATTCAGCTCCCTGCTGCGGTTTTCCTGAAACTGAGATTCTCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGCCCCCAAGATCTGACTCCAGTTGAGAATCTCAGTTTCAGGAAAACCGTCGGCTTGTTCTGTTaGTCTTTAAAAATAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TQCPQDLTPVENLSFRKTVGLFC*SLKIAT Trigger: TGTGGCTATTTTTAAAGACAAACAGAACAAGCCGAC...GGTTTTCCTGAAACTGAGATTCTCAACTGGAGTCAGATCTTGGGGGCACTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS CCA 72 bp | GCACTGGCCCCGTGTGCATCTGCTGGGCCTTTGGAATaGTTTGCCCACTGTCCTGCACTTCCCAGCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: ALAPCASAGPLE*FAHCPALPSSE Trigger: TTCGCTGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CCA 72 bp | GTCAAGCACTGGCCCCGTGTGCATCTGCTGGGCCTTTaGAATGGTTTGCCCACTGTCCTGCACTTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VKHWPRVHLLGL*NGLPTVLHFPA Trigger: TGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CCA 72 bp | CAGCAGACGTCAAGCACTGGCCCCGTGTGCATCTGCTaGGCCTTTGGAATGGTTTGCCCACTGTCCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: QQTSSTGPVCIC*AFGMVCPLSCT Trigger: AGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 90 bp | GTCAAGCACTGGCCCCGTGTGCATCTGCTGGGCCTTTGGAATGGTTaGCCCACTGTCCTGCACTTCCCAGCAGCGAACATCATTCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VKHWPRVHLLGLWNG*PTVLHFPAANIIRP Trigger: TGGGCGAATGATGTTCGCTGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | TCATCACTCCAGCAGACGTCAAGCACTGGCCCCGTGTaGATCTGCTGGGCCTTTGGAATGGTTTGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SSLQQTSSTGPV*ICWAFGMVCPL Trigger: CAGTGGGCAAACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGCTGGAGTGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CCA 72 bp | TTTGCTCCCATCATCACTCCAGCAGACGTCAAGCACTaGCCCCGTGTGCATCTGCTGGGCCTTTGGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: FAPIITPADVKH*PRVHLLGLWNG Trigger: ACCATTCCAAAGGCCCAGCAGATGCACACGGGGCCAGTGCTTGACGTCTGCTGGAGTGATGATGGGAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | ATCTGCTGGGCCTTTGGAATGGTTTGCCCACTGTCCTaGACTTCCCAGCAGCGAACATCATTCGCCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: ICWAFGMVCPLS*TSQQRTSFAHD Trigger: ATCATGGGCGAATGATGTTCGCTGCTGGGAAGTGCAGGACAGTGGGCAAACCATTCCAAAGGCCCAGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | CTGGTTCTCCAGCTGATAGACAATCAGGCCCCTCTCTaGAGTGGCTACCACAGCCATCGGGTATATCACATC | + |
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Preference number: 6 (lower is better) Translates to: LVLQLIDNQAPL*SGYHSHRVYHI Trigger: GATGTGATATACCCGATGGCTGTGGTAGCCACTGCAGAGAGGGGCCTGATTGTCTATCAGCTGGAGAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CCA 72 bp | TCTCCAGCTGATAGACAATCAGGCCCCTCTCTGCAGTaGCTACCACAGCCATCGGGTATATCACATCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SPADRQSGPSLQ*LPQPSGISHLH Trigger: GTGCAGATGTGATATACCCGATGGCTGTGGTAGCCACTGCAGAGAGGGGCCTGATTGTCTATCAGCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS TCA 72 bp | TCTTTAGTTTGGTCCTGGCATCTTTGTCCCAGAAGCTaGACCTACCATCGGAGCCCACAGTGGCAAGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SLVWSWHLCPRS*TYHRSPQWQGY Trigger: GTACCCTTGCCACTGTGGGCTCCGATGGTAGGTTCAGCTTCTGGGACAAAGATGCCAGGACCAAACTAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS GCA 72 bp | CAGGAGCATCATGCTGTGCTATCTGAATGGCCTGGTTaGTGTTCAGGTCCCACATCTTGGCTGTCTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: QEHHAVLSEWPG*CSGPTSWLSCH Trigger: GTGACAAGACAGCCAAGATGTGGGACCTGAACAGCAACCAGGCCATTCAGATAGCACAGCATGATGCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 90 bp | TCCCAGCAGCGAACATCATTCGCCCATGATCCTGCAATAAGGAAGTaGCCTGGTAAAGTTGGCGGGCTGAAAGACAGACAACCGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQQRTSFAHDPAIRK*PGKVGGLKDRQPML Trigger: CAGCATCGGTTGTCTGTCTTTCAGCCCGCCAACTTTACCAGGCAACTTCCTTATTGCAGGATCATGGGCGAATGATGTTCGCTGCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 90 bp | ATGGCAACTCTCCCCTCAATGCTGCCCAGAGCAAACCCAGTCGGCTaGTTCTGTTTGTCTTTAAAAATAGCCACACACCGATGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: MATLPSMLPRANPVG*FCLSLKIATHRCWC Trigger: GCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAAGCCGACTGGGTTTGCTCTGGGCAGCATTGAGGGGAGAGTTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS TCA 72 bp | GGTCCCACATCTTGGCTGTCTTGTCACACGATGCTGTaGATACTTTGCTCCCATCATCACTCCAGCAGACGT | + |
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Preference number: 6 (lower is better) Translates to: GPTSWLSCHTML*ILCSHHHSSRR Trigger: ACGTCTGCTGGAGTGATGATGGGAGCAAAGTATTCACAGCATCGTGTGACAAGACAGCCAAGATGTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 72 bp | GCCTGGTTGCTGTTCAGGTCCCACATCTTGGCTGTCTaGTCACACGATGCTGTGAATACTTTGCTCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: AWLLFRSHILAV*SHDAVNTLLPS Trigger: TGATGGGAGCAAAGTATTCACAGCATCGTGTGACAAGACAGCCAAGATGTGGGACCTGAACAGCAACCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 72 bp | GGAGCCGAAGTGTTGGTACCGTTGGATCGATGGCATTaGAAGGTGAAGTTATCTTTGGCCGGATTTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GAEVLVPLDRWH*KVKLSLAGFGG Trigger: CCCTCCAAATCCGGCCAAAGATAACTTCACCTTCAAATGCCATCGATCCAACGGTACCAACACTTCGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS GCA 72 bp | TTGGATTGTGGTTATCTGTGGTTGTGCTCCCAAACATaGTGGTCCCACCAGTCCCAAATCCAGAGGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LDCGYLWLCSQT*WSHQSQIQRLI Trigger: GATCAACCTCTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | GTTCAGGTCCCACATCTTGGCTGTCTTGTCACACGATaGTGTGAATACTTTGCTCCCATCATCACTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VQVPHLGCLVTR*CEYFAPIITPA Trigger: TGCTGGAGTGATGATGGGAGCAAAGTATTCACAGCATCGTGTGACAAGACAGCCAAGATGTGGGACCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CCA 72 bp | GATTGTGGTTATCTGTGGTTGTGCTCCCAAACATGCTaGTCCCACCAGTCCCAAATCCAGAGGTTGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: DCGYLWLCSQTC*SHQSQIQRLIQ Trigger: TTGGATCAACCTCTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 72 bp | ATGCTGCCCAGAGCAAACCCAGTCGGCTTGTTCTGTTaGTCTTTAAAAATAGCCACACACCGATGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: MLPRANPVGLFC*SLKIATHRCWC Trigger: GCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAAGCCGACTGGGTTTGCTCTGGGCAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS CAA 72 bp | CTCCCCTCAATGCTGCCCAGAGCAAACCCAGTCGGCTaGTTCTGTTTGTCTTTAAAAATAGCCACACACCGA | + |
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Preference number: 6 (lower is better) Translates to: LPSMLPRANPVG*FCLSLKIATHR Trigger: TCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAAGCCGACTGGGTTTGCTCTGGGCAGCATTGAGGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS CAA 72 bp | AGGATGGAAGGCAATCCCATTCACTGCATAGATGTCTaGAGGAGCCGAAGTGTTGGTACCGTTGGATCGATG | + |
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Preference number: 6 (lower is better) Translates to: RMEGNPIHCIDV*RSRSVGTVGSM Trigger: CATCGATCCAACGGTACCAACACTTCGGCTCCTCAAGACATCTATGCAGTGAATGGGATTGCCTTCCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS CAA 90 bp | ACCATGGACAGGATGGAAGGCAATCCCATTCACTGCATAGATGTCTaGAGGAGCCGAAGTGTTGGTACCGTTGGATCGATGGCATTTGAA | + |
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Preference number: 6 (lower is better) Translates to: TMDRMEGNPIHCIDV*RSRSVGTVGSMAFE Trigger: TTCAAATGCCATCGATCCAACGGTACCAACACTTCGGCTCCTCAAGACATCTATGCAGTGAATGGGATTGCCTTCCATCCTGTCCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS TCA 72 bp | ACAGCGTTCAGGGAGTTGCAAGACCATCATAGGATTTaGGGACCGCGTATCCCAGAACTTCAGAGTCTTATC | + |
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Preference number: 6 (lower is better) Translates to: TAFRELQDHHRI*GPRIPELQSLI Trigger: GATAAGACTCTGAAGTTCTGGGATACGCGGTCCTCAAATCCTATGATGGTCTTGCAACTCCCTGAACGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | CGATATCCTTCATTGGATTGTGGTTATCTGTGGTTGTaGTCCCAAACATGCTGGTCCCACCAGTCCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: RYPSLDCGYLWL*SQTCWSHQSQI Trigger: GATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | GATCCAATGTATGGTCTTAACAGGAGCATCATGCTGTaGTATCTGAATGGCCTGGTTGCTGTTCAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: DPMYGLNRSIML*YLNGLVAVQVP Trigger: TGGGACCTGAACAGCAACCAGGCCATTCAGATAGCACAGCATGATGCTCCTGTTAAGACCATACATTGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 72 bp | CGAACATCATTCGCCCATGATCCTGCAATAAGGAAGTaGCCTGGTAAAGTTGGCGGGCTGAAAGACAGACAA | + |
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Preference number: 6 (lower is better) Translates to: RTSFAHDPAIRK*PGKVGGLKDRQ Trigger: TTGTCTGTCTTTCAGCCCGCCAACTTTACCAGGCAACTTCCTTATTGCAGGATCATGGGCGAATGATGTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 72 bp | ATCTTGGCTGTCTTGTCACACGATGCTGTGAATACTTaGCTCCCATCATCACTCCAGCAGACGTCAAGCACT | + |
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Preference number: 6 (lower is better) Translates to: ILAVLSHDAVNT*LPSSLQQTSST Trigger: AGTGCTTGACGTCTGCTGGAGTGATGATGGGAGCAAAGTATTCACAGCATCGTGTGACAAGACAGCCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 90 bp | AAGATGTCACTTCGATATCCTTCATTGGATTGTGGTTATCTGTGGTaGTGCTCCCAAACATGCTGGTCCCACCAGTCCCAAATCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KMSLRYPSLDCGYLW*CSQTCWSHQSQIQR Trigger: CCTCTGGATTTGGGACTGGTGGGACCAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATATCGAAGTGACATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS GCA 72 bp | TGTTTGTCTTTAAAAATAGCCACACACCGATGCTGGTaGTTCAGGGGAGACTCGATTCTCCTGAACTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CLSLKIATHRCW*FRGDSILLNSE Trigger: CTCTGAGTTCAGGAGAATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS GCA 72 bp | TTGTTCTGTTTGTCTTTAAAAATAGCCACACACCGATaGTGGTGCTTCAGGGGAGACTCGATTCTCCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LFCLSLKIATHR*WCFRGDSILLN Trigger: GTTCAGGAGAATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS CCA 72 bp | TTCTGTTTGTCTTTAAAAATAGCCACACACCGATGCTaGTGCTTCAGGGGAGACTCGATTCTCCTGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: FCLSLKIATHRC*CFRGDSILLNS Trigger: TGAGTTCAGGAGAATCGAGTCTCCCCTGAAGCACCAGCATCGGTGTGTGGCTATTTTTAAAGACAAACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029013.10 |
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| CDS CAA 72 bp | TCAGGAGAAGATGTCACTTCGATATCCTTCATTGGATaGTGGTTATCTGTGGTTGTGCTCCCAAACATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGEDVTSISFIG*WLSVVVLPNML Trigger: CAGCATGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATATCGAAGTGACATCTTCTCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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| CDS CAA 72 bp | TGTCATCAGGAGAAGATGTCACTTCGATATCCTTCATaGGATTGTGGTTATCTGTGGTTGTGCTCCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: CHQEKMSLRYPS*DCGYLWLCSQT Trigger: TGTTTGGGAGCACAACCACAGATAACCACAATCCAATGAAGGATATCGAAGTGACATCTTCTCCTGATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029013.10 ENSMUST00000132212.2 |
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